id chr start end name cell_count strand family ref integrity KNR_id closest_gene cell_list cl_2102Ep cl_HepG2 cl_BJ cl_MRC5 cl_HEK293T cl_HeLaS3 cl_K562 cl_MCF7 cl_HCT116 cl_IMR90 cl_HEK293 cl_H1 RTn_assay progeny_count lexic_order 1 chr1 4864391 4867230 chr1:4864391-4867230:-:L1PA4:REF 5 - L1PA4 REF 3prime-truncated 2102Ep,MRC5,HEK293T,K562,HCT116 0.781818 0.464865 0.0212766 0.0 0.506329 0 2 chr1 7411757 7417922 chr1:7411757-7417922:-:L1PA4:REF 8 - L1PA4 REF full-length CAMTA1 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,HEK293 0.726667 0.772947 0.878788 0.926984 0.791667 0.5 0.813333 0.854545 1 3 chr1 12816749 12819764 chr1:12816749-12819764:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated LINC01784 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.805907 0.0216049 0.25 0.168884 0.0797267 0.01875 0.0645833 0.70202 0.109442 0.158996 0.141711 0.497382 2 4 chr1 14287380 14291820 chr1:14287380-14291820:-:L1P2:REF 1 - L1P2 REF 3prime-truncated MRC5 0.0 3 5 chr1 14382318 14388341 chr1:14382318-14388341:-:L1PA3:REF 12 - L1PA3 REF full-length KAZN-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.81993 0.396783 0.783726 0.717051 0.310502 0.220149 0.445148 0.94152 0.628205 0.862434 0.805556 0.918519 4 6 chr1 25506585 25512707 chr1:25506585-25512707:+:L1PA2:REF 12 + L1PA2 REF full-length MACO1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.359975 0.168186 0.86819 0.851806 0.898912 0.638476 0.850679 0.204617 0.942693 0.803797 0.970914 0.665406 5 7 chr1 29404321 29405002 chr1:29404321-29405002:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886076 0.468354 0.543033 0.581281 0.26 0.209877 0.00340136 0.73224 0.721562 0.589928 0.577167 0.830097 6 8 chr1 33829520 33835665 chr1:33829520-33835665:+:L1PA3:REF 12 + L1PA3 REF full-length CSMD2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91879 0.773875 0.943627 0.721667 0.52931 0.467692 0.00529101 0.715481 0.863768 0.739247 0.873508 0.95288 7 9 chr1 33835723 33837011 chr1:33835723-33837011:-:L1P1:REF 9 - L1P1 REF 3prime-truncated CSMD2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,HEK293 0.92093 0.421053 0.895238 0.642202 0.202614 0.307692 0.0103093 0.573913 0.783784 8 10 chr1 34092394 34098413 chr1:34092394-34098413:+:L1PA2:REF 12 + L1PA2 REF full-length CSMD2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.556303 0.73942 0.92834 0.737987 0.440736 0.486081 0.0636646 0.535714 0.715284 0.732353 0.913199 0.909551 9 11 chr1 34250741 34256767 chr1:34250741-34256767:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.230282 0.802711 0.565414 0.54779 0.469314 0.570664 0.00646298 0.786064 0.773732 0.429299 0.857354 0.739353 10 12 chr1 34566055 34572105 chr1:34566055-34572105:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.599373 0.793103 0.821626 0.841207 0.626241 0.672846 0.0245262 0.842917 0.889207 0.739447 0.936461 0.898246 11 13 chr1 41176264 41182362 chr1:41176264-41182362:+:L1PA4:REF 12 + L1PA4 REF full-length SCMH1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905069 0.982472 0.978768 0.976026 0.963398 0.979931 0.965953 0.982222 0.971741 0.983176 0.975347 0.964585 12 14 chr1 41552781 41555631 chr1:41552781-41555631:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated HIVEP3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.903266 0.381915 0.942379 0.915447 0.817073 0.729167 0.0104634 0.808411 0.984594 0.926667 0.961661 0.965753 13 15 chr1 42234037 42235549 chr1:42234037-42235549:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated FOXJ3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.947581 0.986379 0.987885 0.979747 0.967978 0.98004 0.970833 0.974359 0.980117 0.967254 0.978365 0.972973 14 16 chr1 42501438 42502605 chr1:42501438-42502605:-:L1P2:REF 12 - L1P2 REF 3prime-truncated CCDC30 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871404 0.419516 0.845445 0.779846 0.794416 0.542268 0.0264317 0.950562 0.952727 0.779661 0.934899 0.903491 15 17 chr1 43114527 43120516 chr1:43114527-43120516:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0295508 0.00648348 0.890194 0.00602047 0.588824 0.00840336 0.00651702 0.97029 0.766689 0.905231 0.763158 16 18 chr1 46728039 46731434 chr1:46728039-46731434:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated EFCAB14 MRC5 0.121891 17 19 chr1 46846137 46850891 chr1:46846137-46850891:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated CYP4Z2P 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895219 0.444172 0.643761 0.593821 0.428058 0.427653 0.00615385 0.625 0.820872 0.717703 0.877345 0.929961 18 20 chr1 46962586 46965401 chr1:46962586-46965401:-:L1P1:REF 12 - L1P1 REF 3prime-truncated CYP4X1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.914369 0.55081 0.506024 0.548055 0.375635 0.286842 0.00934579 0.87415 0.495017 0.642308 0.683673 0.838462 19 21 chr1 46975973 46982143 chr1:46975973-46982143:+:L1PA6:REF 6 + L1PA6 REF full-length CYP4X1 2102Ep,HepG2,MRC5,HeLaS3,K562,HCT116 0.806452 0.107143 0.393939 0.0 0.0 0.346154 20 22 chr1 47006446 47012568 chr1:47006446-47012568:+:L1PA5:REF 12 + L1PA5 REF full-length CYP4X1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886305 0.517647 0.542453 0.466011 0.5554 0.397647 0.0175913 0.91875 0.528265 0.476038 0.74569 0.814159 21 23 chr1 48150125 48156157 chr1:48150125-48156157:+:L1PA2:REF 12 + L1PA2 REF full-length SKINT1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.13912 0.829229 0.790905 0.819218 0.477876 0.829787 0.0159629 0.924563 0.878618 0.844388 0.94087 0.902778 22 24 chr1 48167952 48173676 chr1:48167952-48173676:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated SKINT1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871508 0.12605 0.345238 0.437931 0.147059 0.240741 0.0 0.357143 0.5 0.5 0.719178 0.888889 23 25 chr1 48277194 48283343 chr1:48277194-48283343:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891626 0.90855 0.773295 0.85 0.472906 0.554331 0.0077821 0.86217 0.944846 0.804143 0.853907 0.911708 24 26 chr1 48363803 48369929 chr1:48363803-48369929:-:L1PA3:REF 12 - L1PA3 REF full-length SPATA6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.92015 0.764196 0.914878 0.94528 0.751678 0.500488 0.0160584 0.776667 0.968892 0.908316 0.922462 0.961468 25 27 chr1 49006012 49012044 chr1:49006012-49012044:+:L1PA3:REF 12 + L1PA3 REF full-length AGBL4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.195595 0.725664 0.840522 0.696575 0.498645 0.821875 0.0162602 0.387841 0.775615 0.826087 0.900794 0.881013 26 28 chr1 49068236 49074523 chr1:49068236-49074523:-:L1PA6:REF 12 - L1PA6 REF full-length AGBL4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.861718 0.0243902 0.565923 0.30672 0.263959 0.0406699 0.00664452 0.486842 0.184943 0.383459 0.41637 0.674157 27 29 chr1 49116225 49122348 chr1:49116225-49122348:-:L1PA6:REF 6 - L1PA6 REF full-length AGBL4 2102Ep,HepG2,BJ,MRC5,HCT116,HEK293 0.846154 0.136364 0.392857 0.21466 0.255319 0.25 28 30 chr1 49158376 49161513 chr1:49158376-49161513:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated AGBL4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.794872 0.0610687 0.382353 0.113402 0.0309278 0.0163934 0.0 0.04 0.0714286 0.0731707 0.116505 0.244898 29 31 chr1 49257178 49257818 chr1:49257178-49257818:-:L1PA3:REF 8 - L1PA3 REF 3prime-truncated AGBL4 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,HEK293 0.109375 0.59887 0.670391 0.793729 0.337143 0.0 0.745161 0.721519 30 32 chr1 49282507 49288376 chr1:49282507-49288376:+:L1PA2:REF 12 + L1PA2 REF full-length AGBL4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.913043 0.698907 0.777533 0.771552 0.668515 0.651424 0.0139037 0.819444 0.891195 0.80746 0.837566 0.902326 31 33 chr1 49561313 49567447 chr1:49561313-49567447:-:L1PA4:REF 12 - L1PA4 REF full-length AGBL4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.852703 0.148766 0.562744 0.617792 0.136079 0.227831 0.0135379 0.236486 0.457561 0.630832 0.445642 0.776946 32 34 chr1 49915108 49921256 chr1:49915108-49921256:+:L1PA5:REF 12 + L1PA5 REF full-length AGBL4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.73755 0.0324607 0.326288 0.375415 0.109137 0.0890052 0.013373 0.136646 0.224036 0.317647 0.288136 0.542751 33 35 chr1 49934841 49940864 chr1:49934841-49940864:+:L1PA3:REF 12 + L1PA3 REF full-length AGBL4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.735552 0.417889 0.665265 0.685643 0.32124 0.486953 0.00821297 0.45215 0.791206 0.712114 0.663712 0.854323 34 36 chr1 52171000 52177141 chr1:52171000-52177141:-:L1PA3:REF 12 - L1PA3 REF full-length ZFYVE9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.936823 0.850575 0.933333 0.966276 0.920086 0.533333 0.86645 0.444444 0.94517 0.913793 0.983165 1.0 35 37 chr1 55430256 55436824 chr1:55430256-55436824:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.847926 0.975177 0.988095 0.877133 0.85461 0.854962 0.353414 0.941176 0.91342 1.0 0.966346 0.886179 36 38 chr1 55561830 55567969 chr1:55561830-55567969:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872897 0.639053 0.942505 0.944553 0.689482 0.847352 0.012024 0.769231 0.944444 0.903226 0.786192 0.87156 37 39 chr1 56089638 56092245 chr1:56089638-56092245:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.281538 0.877239 0.979209 0.974872 0.930334 0.882643 0.0309668 0.890987 0.984273 0.969371 0.964819 0.974723 38 40 chr1 58126455 58132485 chr1:58126455-58132485:-:L1PA2:REF 12 - L1PA2 REF full-length DAB1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.445887 0.617781 0.826251 0.778841 0.777293 0.663498 0.0808598 0.762673 0.84666 0.755274 0.835973 0.935657 39 41 chr1 58269013 58275032 chr1:58269013-58275032:-:L1PA2:REF 8 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116 0.0663544 0.699454 0.714286 0.752525 0.465565 0.657807 0.0218182 0.736111 40 42 chr1 58321304 58322025 chr1:58321304-58322025:+:L1PA6:REF 10 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.742424 0.554252 0.785047 0.705645 0.617647 0.440476 0.0135747 0.615721 0.692857 0.851351 41 43 chr1 58373171 58379206 chr1:58373171-58379206:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.164038 0.931624 0.9138 0.947602 0.891955 0.77554 0.157025 0.927524 0.892062 0.872491 0.926151 0.890254 42 44 chr1 58958128 58964283 chr1:58958128-58964283:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.825215 0.836991 0.924686 0.888025 0.939216 0.724138 0.686047 0.628099 0.891447 0.944954 0.922747 0.958333 43 45 chr1 59250823 59256962 chr1:59250823-59256962:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.791536 0.505919 0.902504 0.805588 0.909091 0.718093 0.0508685 0.956155 0.978281 0.880471 0.94291 0.944643 44 46 chr1 59368923 59375078 chr1:59368923-59375078:+:L1PA3:REF 12 + L1PA3 REF full-length FGGY 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.930023 0.974089 0.912075 0.983531 0.96449 0.938719 0.569512 0.93911 0.977208 0.916427 0.959132 0.974026 45 47 chr1 59532995 59539008 chr1:59532995-59539008:+:L1PA3:REF 12 + L1PA3 REF full-length FGGY 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.312223 0.976118 0.949247 0.961724 0.84 0.829685 0.373031 0.97195 0.977697 0.970796 0.958806 0.92752 46 48 chr1 59586803 59592948 chr1:59586803-59592948:+:L1PA3:REF 12 + L1PA3 REF full-length FGGY 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.840237 0.832 0.847291 0.922039 0.734597 0.758242 0.100775 0.864198 0.863905 0.881579 0.87 0.955414 47 49 chr1 59647747 59653779 chr1:59647747-59653779:-:L1PA2:REF 12 - L1PA2 REF full-length FGGY 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.166988 0.98178 0.960114 0.958874 0.720238 0.808725 0.152334 0.950139 0.977139 0.974474 0.970434 0.965035 48 50 chr1 60490132 60496149 chr1:60490132-60496149:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0464169 0.708936 0.855109 0.758938 0.241167 0.632953 0.13113 0.521921 0.947548 0.821577 0.839606 0.804878 49 51 chr1 60640012 60646037 chr1:60640012-60646037:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0240964 0.916029 0.873345 0.859375 0.828858 0.847584 0.00893921 0.500411 0.952844 0.871473 0.947813 0.947517 50 52 chr1 61578807 61579287 chr1:61578807-61579287:-:L1PA6:REF 7 - L1PA6 REF 3prime-truncated HepG2,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293 0.27933 0.548673 0.510417 0.477477 0.0 0.675676 0.8 51 53 chr1 65390008 65390010 chr1:65390008-65390010:-:L1HS:NONREF 1 - L1HS KNR 1KGP:L1_umary_LINE1_51,Philippe:EXP_ID_0020 DNAJC6 HeLaS3 0.860158 52 54 chr1 65450279 65456309 chr1:65450279-65456309:-:L1PA3:REF 12 - L1PA3 REF full-length LEPR 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.621277 0.904 0.973282 0.945835 0.923115 0.894437 0.964646 0.958834 0.97166 0.920588 0.955468 0.949126 53 55 chr1 65462002 65468172 chr1:65462002-65468172:-:L1PA6:REF 12 - L1PA6 REF full-length LEPR 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901961 0.526582 0.971292 0.972509 0.873846 0.878173 0.758454 0.68932 0.974453 0.952381 0.953975 0.904762 54 56 chr1 65544806 65550970 chr1:65544806-65550970:-:L1PA3:REF 12 - L1PA3 REF full-length LEPR 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.286389 0.867984 0.753247 0.795009 0.852941 0.783912 0.856256 0.748936 0.882472 0.786948 0.871257 0.475789 55 57 chr1 65558564 65564576 chr1:65558564-65564576:-:L1PA2:REF 12 - L1PA2 REF full-length LEPR 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.105023 0.851996 0.940586 0.907078 0.305339 0.750403 0.973048 0.926214 0.98626 0.868946 0.914203 0.773087 56 58 chr1 65651673 65658083 chr1:65651673-65658083:+:L1PA7:REF 1 + L1PA7 REF full-length MRC5 0.4375 57 59 chr1 65740188 65744672 chr1:65740188-65744672:-:L1PA7:REF 2 - L1PA7 REF 3prime-truncated MRC5,HCT116 0.55102 0.866667 58 60 chr1 66199807 66204996 chr1:66199807-66204996:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated PDE4B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.876387 0.703297 0.795527 0.723982 0.840452 0.967089 0.0 0.455172 0.962633 0.912773 0.951036 0.957746 59 61 chr1 66480923 66486952 chr1:66480923-66486952:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.249446 0.887858 0.87005 0.979826 0.117309 0.933555 0.0162399 0.738255 0.887417 0.928409 0.874062 0.903553 60 62 chr1 66780142 66786326 chr1:66780142-66786326:+:L1PA4:REF 12 + L1PA4 REF full-length TCTEX1D1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.875 0.511501 0.814791 0.918808 0.949953 0.466987 0.0724638 0.615385 0.97006 0.774336 0.94236 0.958217 61 63 chr1 67078891 67084915 chr1:67078891-67084915:-:L1HS:REF 12 - L1HS REF full-length C1orf141 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.277527 0.920516 0.898392 0.969611 0.867866 0.859594 0.854339 0.944551 0.971045 0.95045 0.951059 0.978667 62 64 chr1 67176638 67182776 chr1:67176638-67182776:-:L1PA4:REF 12 - L1PA4 REF full-length IL23R 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.811736 0.292835 0.609325 0.681034 0.639821 0.363636 0.495 0.91 0.896024 0.746082 0.714286 0.805147 63 65 chr1 68003126 68009223 chr1:68003126-68009223:-:L1PA6:REF 1 - L1PA6 REF full-length GNG12-AS1 MRC5 0.181818 64 66 chr1 68736693 68740136 chr1:68736693-68740136:-:L1HS:REF 11 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.115971 0.747253 0.810618 0.558855 0.71956 0.0151685 0.640541 0.979202 0.811858 0.892152 0.945043 65 67 chr1 68875777 68881805 chr1:68875777-68881805:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0950752 0.666667 0.735734 0.781973 0.00932529 0.173913 0.0104083 0.623639 0.979896 0.79646 0.878169 0.846284 66 68 chr1 68923486 68926929 chr1:68923486-68926929:+:L1PA2:REF 7 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,K562,HCT116,HEK293 0.505435 0.783505 0.856703 0.746032 0.0543478 0.980822 0.899497 67 69 chr1 69117059 69120511 chr1:69117059-69120511:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated LINC01707 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.128866 0.702001 0.857824 0.867211 0.792476 0.859413 0.0127168 0.842676 0.988751 0.879699 0.979644 0.7669 68 70 chr1 69389449 69395594 chr1:69389449-69395594:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891244 0.322811 0.593968 0.571942 0.084089 0.102845 0.14367 0.335505 0.947143 0.714542 0.831012 0.943833 69 71 chr1 69882613 69888643 chr1:69882613-69888643:-:L1PA2:REF 6 - L1PA2 REF full-length LRRC7 2102Ep,HepG2,MRC5,HEK293T,K562,IMR90 0.159794 0.773504 0.838362 0.543103 0.00641026 0.850829 70 72 chr1 69903177 69903524 chr1:69903177-69903524:+:L1P3:REF 1 + L1P3 REF 3prime-truncated LRRC7 MRC5 0.333333 71 73 chr1 69905264 69911348 chr1:69905264-69911348:-:L1PA4:REF 12 - L1PA4 REF full-length LRRC7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.85687 0.457335 0.733021 0.74158 0.63878 0.20229 0.0437666 0.635739 0.954248 0.817694 0.89418 0.976415 72 74 chr1 69922813 69928952 chr1:69922813-69928952:-:L1PA3:REF 11 - L1PA3 REF full-length LRRC7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.865963 0.849696 0.915506 0.835838 0.66537 0.962514 0.0359532 0.829615 0.905 0.907511 0.858491 73 75 chr1 71888203 71894235 chr1:71888203-71894235:+:L1PA2:REF 12 + L1PA2 REF full-length NEGR1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0756201 0.780122 0.963692 0.917224 0.653146 0.731518 0.0152193 0.549085 0.978117 0.949934 0.874409 0.899497 Rodriguez-Martin_2020:0,Tubio_2014:1 74 76 chr1 72898768 72900480 chr1:72898768-72900480:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0641422 0.859092 0.83311 0.813461 0.382901 0.318878 0.089926 0.502016 0.979321 0.792324 0.886722 0.944818 75 77 chr1 74877120 74883155 chr1:74877120-74883155:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.757939 0.362881 0.663815 0.680077 0.630394 0.35689 0.0192539 0.537118 0.976092 0.735812 0.7304 0.885714 76 78 chr1 74986518 74992624 chr1:74986518-74992624:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856655 0.218776 0.355499 0.37268 0.63586 0.0840336 0.0159151 0.428205 0.949333 0.419492 0.455746 0.889807 77 79 chr1 75375826 75377085 chr1:75375826-75377085:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated SLC44A5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0570919 0.339028 0.588749 0.613946 0.00540906 0.656189 0.0272109 0.895349 0.52397 0.618357 0.817927 0.729614 78 80 chr1 75476261 75482430 chr1:75476261-75482430:+:L1PA3:REF 12 + L1PA3 REF full-length SLC44A5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.882072 0.816419 0.718484 0.653252 0.843101 0.28295 0.905004 0.705247 0.976726 0.716949 0.958983 0.976303 79 81 chr1 75677750 75683758 chr1:75677750-75683758:+:L1PA3:REF 11 + L1PA3 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0111429 0.626355 0.806703 0.273367 0.782096 0.0176423 0.902469 0.983383 0.748092 0.910919 0.791803 80 82 chr1 75697639 75703674 chr1:75697639-75703674:+:L1PA4:REF 11 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.708531 0.786749 0.762821 0.688264 0.811828 0.712766 0.617647 0.981651 0.786164 0.883117 0.969388 81 83 chr1 75777591 75783742 chr1:75777591-75783742:+:L1PA4:REF 12 + L1PA4 REF full-length RABGGTB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871166 0.884892 0.913043 0.935484 0.870056 0.9 0.888889 1.0 0.977778 0.961039 0.926316 0.966102 82 84 chr1 75828831 75834934 chr1:75828831-75834934:+:L1PA5:REF 1 + L1PA5 REF full-length MSH4 MRC5 1.0 83 85 chr1 76739649 76742106 chr1:76739649-76742106:-:L1PA7:REF 11 - L1PA7 REF 3prime-truncated 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889225 0.653017 0.630651 0.739705 0.10951 0.013373 0.8 0.973717 0.57173 0.879397 0.946789 84 86 chr1 77000000 77005515 chr1:77000000-77005515:-:L1HS:REF 12 - L1HS REF 3prime-truncated ST6GALNAC5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.19697 0.843453 0.909754 0.909138 0.879571 0.485571 0.031106 0.924242 0.970233 0.804452 0.907619 0.923434 85 87 chr1 78485728 78485730 chr1:78485728-78485730:+:L1HS:NONREF 1 + L1HS KNR Philippe:EXP_ID_0032 PTGFR HeLaS3 0.840787 86 88 chr1 78607699 78613730 chr1:78607699-78613730:+:L1PA6:REF 5 + L1PA6 REF full-length IFI44L HepG2,HEK293T,K562,IMR90,HEK293 0.402597 0.657143 0.0 0.785714 0.694444 87 89 chr1 78698954 78699378 chr1:78698954-78699378:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.763557 0.03 0.773973 0.915575 0.486708 0.323232 0.00337838 0.4 0.801932 0.857923 0.435696 0.711111 88 90 chr1 78845456 78851474 chr1:78845456-78851474:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.75859 0.680851 0.949402 0.969272 0.841777 0.920852 0.0199336 0.928693 0.977648 0.942346 0.800857 0.961456 89 91 chr1 79414188 79420301 chr1:79414188-79420301:+:L1PA5:REF 11 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.855153 0.575194 0.761644 0.890052 0.77167 0.630094 0.736364 0.93871 0.821168 0.719149 0.960606 90 92 chr1 79511261 79517280 chr1:79511261-79517280:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.300746 0.781737 0.835492 0.933333 0.849956 0.664151 0.0277228 0.820106 0.984394 0.916067 0.918654 0.947846 91 93 chr1 79888611 79894731 chr1:79888611-79894731:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.778351 0.0182648 0.888889 0.927711 0.805882 0.0810811 0.0 0.395833 0.948148 0.948454 0.522727 0.698413 92 94 chr1 79938402 79944419 chr1:79938402-79944419:-:L1PA2:REF 6 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116 0.911483 0.587045 0.872549 0.959866 0.830904 0.97992 93 95 chr1 80132548 80138577 chr1:80132548-80138577:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.643629 0.50078 0.754258 0.88649 0.88131 0.439911 0.00883913 0.731773 0.972589 0.854808 0.909774 0.885305 94 96 chr1 80394348 80400494 chr1:80394348-80400494:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.766467 0.653369 0.785195 0.927279 0.884229 0.509268 0.0114734 0.973533 0.943669 0.862603 0.913086 0.8888 95 97 chr1 80939203 80945257 chr1:80939203-80945257:-:L1HS:REF 9 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,HEK293,H1 0.377294 0.844008 0.783058 0.812876 0.930025 0.946764 0.982821 0.906958 0.950777 Gardner_2017:1 96 98 chr1 82130929 82136890 chr1:82130929-82136890:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0903471 0.853047 0.925181 0.944275 0.863008 0.814711 0.0128465 0.98427 0.989034 0.923845 0.98232 0.893617 97 99 chr1 82250044 82256069 chr1:82250044-82256069:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.612603 0.74751 0.596793 0.743968 0.808817 0.525475 0.0211749 0.94431 0.929528 0.709276 0.817358 0.968085 98 100 chr1 83167420 83173581 chr1:83167420-83173581:+:L1PA4:REF 7 + L1PA4 REF full-length LINC01362 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,IMR90 0.235294 0.0707965 0.2 0.133971 0.190476 0.278689 0.166667 99 101 chr1 83182174 83188201 chr1:83182174-83188201:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0672976 0.322892 0.941558 0.850269 0.0877397 0.684739 0.0790674 0.974066 0.983353 0.911811 0.957085 0.6525 100 102 chr1 83263607 83269631 chr1:83263607-83269631:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0969551 0.752584 0.89839 0.884094 0.911814 0.78115 0.0283648 0.949957 0.984927 0.889111 0.893617 0.73401 101 103 chr1 83350413 83356465 chr1:83350413-83356465:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.594724 0.795256 0.865974 0.746625 0.938532 0.667028 0.0209424 0.965461 0.816575 0.747664 0.919611 0.956842 102 104 chr1 84052389 84058406 chr1:84052389-84058406:-:L1HS:REF 4 - L1HS REF full-length BJ,HEK293T,K562,HEK293 0.935484 0.939173 0.702335 0.967164 Gardner_2017:3,Philippe_2016:1,Rodriguez-Martin_2020:39,Tubio_2014:7 103 105 chr1 84228930 84234940 chr1:84228930-84234940:-:L1PA3:REF 12 - L1PA3 REF full-length PRKACB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.915769 0.945361 0.985238 0.984962 0.962249 0.901322 0.595133 0.27208 0.987426 0.926794 0.974373 0.979424 104 106 chr1 85508351 85514542 chr1:85508351-85514542:+:L1PA6:REF 12 + L1PA6 REF full-length DDAH1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901869 0.609848 0.953704 0.949515 0.860558 0.465409 0.0 0.933333 0.946809 0.963235 0.97619 0.95 105 107 chr1 85641866 85648021 chr1:85641866-85648021:+:L1PA3:REF 12 + L1PA3 REF full-length ZNHIT6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.740199 0.364167 0.986921 0.986686 0.973306 0.978261 0.957171 0.00857843 0.985266 0.963173 0.973446 0.952564 106 108 chr1 85748519 85754548 chr1:85748519-85754548:+:L1HS:REF 12 + L1HS REF full-length COL24A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0571544 0.929778 0.886091 0.967423 0.85809 0.801214 0.0222841 0.898305 0.945389 0.91953 0.854291 0.945468 107 109 chr1 85824940 85830944 chr1:85824940-85830944:-:L1PA3:REF 12 - L1PA3 REF full-length COL24A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868739 0.534442 0.917516 0.720398 0.806167 0.659574 0.0115658 0.001443 0.977583 0.874648 0.958065 0.97593 108 110 chr1 85920984 85921431 chr1:85920984-85921431:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated COL24A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.796813 0.03125 0.522222 0.857741 0.148789 0.0326087 0.0 0.636364 0.933333 0.774194 0.155932 0.867647 109 111 chr1 85927067 85933100 chr1:85927067-85933100:+:L1HS:REF 12 + L1HS REF full-length COL24A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.106429 0.830582 0.896758 0.94683 0.857467 0.799636 0.0874074 0.844854 0.912757 0.889273 0.89459 0.907376 Gardner_2017:1 110 112 chr1 86625551 86630498 chr1:86625551-86630498:-:L1P1:REF 10 - L1P1 REF 3prime-truncated CLCA4-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293 0.0762712 0.592 0.467742 0.414343 0.457711 0.583333 0.129496 0.259259 0.378109 0.576577 111 113 chr1 86630495 86634080 chr1:86630495-86634080:-:L1P1:REF 12 - L1P1 REF 3prime-truncated CLCA4-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886726 0.276151 0.687129 0.806742 0.514663 0.589552 0.0177665 0.915094 0.951583 0.816406 0.805941 0.905172 112 114 chr1 86679080 86685111 chr1:86679080-86685111:-:L1HS:REF 12 - L1HS REF full-length CLCA4-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0906684 0.941882 0.890523 0.89703 0.901174 0.810671 0.46583 0.767181 0.979629 0.923865 0.94401 0.899743 Rodriguez-Martin_2020:39,Tubio_2014:4 113 115 chr1 88341842 88347867 chr1:88341842-88347867:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0888889 0.8402 0.871087 0.927907 0.944114 0.582339 0.00380228 0.928571 0.967422 0.948718 0.947712 0.972603 114 116 chr1 89033760 89034690 chr1:89033760-89034690:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.824401 0.426859 0.790785 0.86608 0.607212 0.64218 0.0322581 0.948529 0.927273 0.822086 0.68435 0.879668 115 117 chr1 89412579 89418615 chr1:89412579-89418615:-:L1PA2:REF 12 - L1PA2 REF full-length GBP1P1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0507626 0.878404 0.807333 0.845138 0.255599 0.655471 0.126421 0.936864 0.977083 0.826723 0.935556 0.934741 116 118 chr1 89747026 89753053 chr1:89747026-89753053:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.103429 0.894609 0.869344 0.938689 0.950054 0.845267 0.758034 0.888143 0.883249 0.893701 0.977764 0.800926 117 119 chr1 90057280 90063312 chr1:90057280-90063312:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.170068 0.0111675 0.76 0.830025 0.45336 0.771971 0.0236876 0.8257 0.87323 0.800285 0.929623 0.920228 118 120 chr1 90166845 90172987 chr1:90166845-90172987:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87146 0.248945 0.679707 0.75195 0.826923 0.2 0.00280112 0.696429 0.762857 0.835294 0.928161 0.950617 119 121 chr1 90218768 90219842 chr1:90218768-90219842:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0805195 0.820285 0.684759 0.713252 0.485035 0.569672 0.0133883 0.881639 0.847307 0.721939 0.95104 0.195827 120 122 chr1 90997570 91000000 chr1:90997570-91000000:+:L1P1:REF 12 + L1P1 REF 3prime-truncated ZNF644 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.83087 0.981329 0.983142 0.980895 0.852834 0.976056 0.869809 0.758881 0.987035 0.970874 0.822493 0.989324 121 123 chr1 91130959 91132973 chr1:91130959-91132973:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898969 0.582897 0.534946 0.544018 0.914226 0.786585 0.0177665 0.864 0.864706 0.542857 0.946708 0.844221 122 124 chr1 91286649 91288366 chr1:91286649-91288366:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated HFM1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.494231 0.848948 0.866814 0.938277 0.827551 0.849829 0.827044 0.628821 0.976763 0.920375 0.960145 0.936652 123 125 chr1 91366637 91372747 chr1:91366637-91372747:+:L1PA4:REF 12 + L1PA4 REF full-length HFM1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898588 0.702149 0.592975 0.678546 0.902492 0.0806754 0.587922 0.154167 0.974965 0.821429 0.917827 0.923913 124 126 chr1 92430764 92436888 chr1:92430764-92436888:-:L1PA5:REF 4 - L1PA5 REF full-length HepG2,MRC5,HEK293T,HeLaS3 0.458333 0.758333 0.9 0.647059 125 127 chr1 92891523 92897666 chr1:92891523-92897666:+:L1PA4:REF 1 + L1PA4 REF full-length DIPK1A MRC5 0.890625 126 128 chr1 93509600 93511684 chr1:93509600-93511684:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated FNBP1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.927992 0.981354 0.978197 0.966537 0.975417 0.972617 0.926554 0.860116 0.980849 0.988359 0.974093 0.978235 127 129 chr1 93790652 93796681 chr1:93790652-93796681:-:L1PA2:REF 12 - L1PA2 REF full-length BCAR3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.757899 0.976725 0.977748 0.977575 0.95447 0.982159 0.361647 0.971865 0.987191 0.972437 0.983404 0.937568 128 130 chr1 94364259 94370410 chr1:94364259-94370410:-:L1PA6:REF 9 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,HEK293 0.864407 0.925532 0.648148 0.770588 0.721519 0.6 0.0 0.966667 0.8125 129 131 chr1 95210689 95216990 chr1:95210689-95216990:-:L1PA6:REF 10 - L1PA6 REF full-length TMEM56-RWDD3 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.943548 0.968675 0.80198 0.963964 0.934211 0.894928 0.97 0.977049 0.96 0.97 130 132 chr1 95292237 95298258 chr1:95292237-95298258:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.251757 0.925574 0.922629 0.930833 0.900738 0.870839 0.184604 0.987433 0.995579 0.931596 0.964397 0.963889 131 133 chr1 95336285 95336287 chr1:95336285-95336287:-:L1HS:NONREF 4 - L1HS KNR euL1db:mrip262,1KGP:L1_umary_LINE1_90,Philippe:EXP_ID_0039 HEK293T,MCF7,HCT116,HEK293 0.722363 0.87464 0.959446 0.897887 132 134 chr1 96051579 96057733 chr1:96051579-96057733:-:L1PA3:REF 1 - L1PA3 REF full-length MRC5 0.515152 133 135 chr1 96243976 96247116 chr1:96243976-96247116:-:L1PA3:REF 11 - L1PA3 REF 3prime-truncated LINC01787 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.935075 0.620594 0.90917 0.956342 0.428962 0.591382 0.0138151 0.944444 0.975678 0.85796 0.903285 134 136 chr1 96433439 96439591 chr1:96433439-96439591:-:L1PA5:REF 2 - L1PA5 REF full-length BJ,H1 0.0 0.0 135 137 chr1 96604386 96610400 chr1:96604386-96610400:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.76982 0.869732 0.905305 0.893574 0.905312 0.837555 0.0234542 0.874317 0.9174 0.923457 0.894118 0.927033 136 138 chr1 96616037 96617994 chr1:96616037-96617994:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.806452 0.636364 0.597701 0.880668 0.592857 0.523256 0.0120482 0.945455 0.857143 0.838384 0.666667 1.0 137 139 chr1 96651258 96657410 chr1:96651258-96657410:+:L1PA4:REF 3 + L1PA4 REF full-length MRC5,HeLaS3,K562 0.913043 0.21519 0.00970874 138 140 chr1 96853195 96859362 chr1:96853195-96859362:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885666 0.875493 0.949512 0.973456 0.878448 0.017619 0.981092 0.935921 0.964697 0.962537 0.959538 139 141 chr1 98588661 98592036 chr1:98588661-98592036:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.838994 0.860224 0.855263 0.831073 0.798134 0.716636 0.0162602 0.865103 0.978856 0.854701 0.891735 0.926396 140 142 chr1 98756374 98756376 chr1:98756374-98756376:-:L1HS:NONREF 1 - L1HS KNR Philippe:EXP_ID_0041 SNX7 HepG2 0.917601 141 143 chr1 98875638 98881734 chr1:98875638-98881734:-:L1PA6:REF 12 - L1PA6 REF full-length PLPPR5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905172 0.249561 0.74345 0.804754 0.452683 0.101515 0.0167832 0.444037 0.823592 0.74744 0.484392 0.879213 142 144 chr1 99159199 99162698 chr1:99159199-99162698:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated MRC5 0.180723 143 145 chr1 99399824 99405973 chr1:99399824-99405973:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.928166 0.706304 0.886364 0.928006 0.667674 0.522857 0.134571 0.723529 0.967543 0.928571 0.713062 0.984127 144 146 chr1 99799027 99801045 chr1:99799027-99801045:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.314286 0.166667 0.486486 0.135338 0.215686 0.689655 0.478261 0.818182 0.235294 0.888889 0.122807 0.0 145 147 chr1 100199602 100206088 chr1:100199602-100206088:+:L1PA7:REF 12 + L1PA7 REF full-length DBT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880102 0.975248 0.967164 0.824755 0.956 0.984848 0.94697 0.99 0.974603 0.980645 0.965079 0.967105 146 148 chr1 100632238 100638390 chr1:100632238-100638390:-:L1PA3:REF 12 - L1PA3 REF full-length LINC01349 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.842623 0.799207 0.833076 0.959253 0.807744 0.377581 0.0185185 0.88412 0.959866 0.957265 0.8367 0.955446 147 149 chr1 100819961 100826211 chr1:100819961-100826211:+:L1PA7:REF 11 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.335938 0.191388 0.343066 0.708861 0.476015 0.220126 0.314286 0.333333 0.75 0.827586 0.638095 148 150 chr1 100843474 100846099 chr1:100843474-100846099:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated MRC5 0.528 149 151 chr1 102103367 102103369 chr1:102103367-102103369:+:L1HS:NONREF 5 + L1HS KNR euL1db:mrip287,1KGP:L1_umary_LINE1_99,Philippe:EXP_ID_0045 2102Ep,HepG2,BJ,HeLaS3,HCT116 0.0532591 0.863733 0.718537 0.685649 0.919845 Rodriguez-Martin_2020:5 150 152 chr1 102311534 102312930 chr1:102311534-102312930:-:L1P1:REF 11 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.61529 0.441523 0.393777 0.356024 0.175793 0.274047 0.0119332 0.441509 0.489461 0.384503 0.773109 151 153 chr1 102442083 102448229 chr1:102442083-102448229:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.826355 0.554292 0.630709 0.553701 0.257664 0.559041 0.0236337 0.664151 0.963542 0.686354 0.559179 0.9375 152 154 chr1 102826495 102832654 chr1:102826495-102832654:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.892437 0.036129 0.908213 0.827804 0.555267 0.685567 0.026253 0.988764 0.977625 0.797872 0.642857 0.955801 153 155 chr1 102928102 102934113 chr1:102928102-102934113:-:L1PA2:REF 9 - L1PA2 REF full-length COL11A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293 0.020202 0.637363 0.854545 0.900474 0.494253 0.654321 0.985577 0.931818 0.784091 154 156 chr1 104056774 104058738 chr1:104056774-104058738:+:L1P3:REF 7 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HEK293 0.11828 0.209302 0.193277 0.374074 0.228571 0.0 0.321429 155 157 chr1 104218010 104223212 chr1:104218010-104223212:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.766562 0.0625 0.355596 0.275663 0.418816 0.0720339 0.00740741 0.0702703 0.983051 0.414097 0.141026 0.871795 156 158 chr1 104658853 104664872 chr1:104658853-104664872:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.063787 0.875941 0.82754 0.835477 0.0625147 0.808917 0.0192308 0.338122 0.989035 0.8472 0.912862 0.954906 157 159 chr1 104770247 104776278 chr1:104770247-104776278:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.15581 0.888254 0.871663 0.851965 0.950365 0.867596 0.0170068 0.856764 0.983488 0.870769 0.826715 0.934783 158 160 chr1 104843833 104849864 chr1:104843833-104849864:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0499343 0.875145 0.804675 0.84964 0.950605 0.758672 0.0337365 0.807361 0.921684 0.858559 0.866725 0.975799 159 161 chr1 104935148 104941180 chr1:104935148-104941180:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.555556 0.37361 0.49055 0.422067 0.646006 0.582583 0.0242718 0.17101 0.781463 0.540541 0.467695 0.721893 160 162 chr1 105265421 105265833 chr1:105265421-105265833:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.836676 0.0147493 0.503937 0.458333 0.866803 0.395522 0.0 0.397959 0.956349 0.582353 0.703822 0.95 161 163 chr1 105315153 105315155 chr1:105315153-105315155:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip301,1KGP:L1_umary_LINE1_103,Philippe:EXP_ID_0047 HeLaS3,IMR90 0.917004 0.883772 162 164 chr1 106329424 106335537 chr1:106329424-106335537:+:L1PA5:REF 1 + L1PA5 REF full-length HeLaS3 0.0727273 163 165 chr1 107844024 107848032 chr1:107844024-107848032:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated VAV3 MRC5 0.966292 164 166 chr1 108358320 108364417 chr1:108358320-108364417:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.836317 0.2224 0.625298 0.75 0.483622 0.934579 0.949367 0.979502 0.867374 0.562814 0.823864 0.913043 165 167 chr1 111335211 111341371 chr1:111335211-111341371:+:L1PA3:REF 12 + L1PA3 REF full-length PIFO 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.864802 0.302932 0.514056 0.546537 0.333653 0.0676118 0.00909091 0.680887 0.761807 0.550071 0.561772 0.782471 166 168 chr1 112154799 112160810 chr1:112154799-112160810:-:L1PA2:REF 9 - L1PA2 REF full-length 2102Ep,HepG2,BJ,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.0828841 0.617524 0.751793 0.657862 0.0174459 0.850575 0.773551 0.729984 0.847826 167 169 chr1 112199142 112205303 chr1:112199142-112205303:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880973 0.0293772 0.387622 0.450962 0.029316 0.0550162 0.0240964 0.690449 0.288779 0.446529 0.45283 0.83908 168 170 chr1 112211668 112217805 chr1:112211668-112217805:+:L1PA5:REF 1 + L1PA5 REF full-length MRC5 0.382353 169 171 chr1 112221418 112227438 chr1:112221418-112227438:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.502449 0.893724 0.784854 0.799274 0.688375 0.730185 0.0485876 0.875229 0.765203 0.721519 0.906977 0.891753 170 172 chr1 113497220 113500000 chr1:113497220-113500000:+:L1HS:REF 12 + L1HS REF 3prime-truncated MAGI3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.203304 0.988417 0.984356 0.985328 0.979839 0.973719 0.648506 0.988662 0.983587 0.966851 0.984596 0.772436 Brouha_2003:3.0 Gardner_2017:2,Holmes_1994:1,Rodriguez-Martin_2020:15,Tubio_2014:3 171 173 chr1 113633560 113639380 chr1:113633560-113639380:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated MAGI3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886814 0.92819 0.893515 0.9785 0.921767 0.980562 0.644937 0.61625 0.981214 0.96374 0.937367 0.984779 172 174 chr1 114239262 114241429 chr1:114239262-114241429:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909722 0.12212 0.542735 0.560633 0.782235 0.055814 0.0196721 0.893238 0.864353 0.644444 0.810127 0.902439 173 175 chr1 114303991 114310120 chr1:114303991-114310120:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.694179 0.586681 0.760452 0.667152 0.626655 0.47479 0.0187192 0.754826 0.760947 0.792453 0.682831 0.74 174 176 chr1 115147821 115153959 chr1:115147821-115153959:+:L1PA2:REF 10 + L1PA2 REF full-length 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.392054 0.79397 0.446737 0.0425252 0.78561 0.0162549 0.501555 0.62545 0.554217 0.904564 175 177 chr1 116051913 116058065 chr1:116051913-116058065:+:L1PA3:REF 12 + L1PA3 REF full-length SLC22A15 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.937393 0.847255 0.969104 0.91914 0.929249 0.955844 0.0562103 0.968242 0.971055 0.810127 0.977324 0.957111 176 178 chr1 116974738 116980865 chr1:116974738-116980865:+:L1PA5:REF 12 + L1PA5 REF full-length PTGFRN 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.940417 0.918692 0.830467 0.622195 0.973568 0.920325 0.975207 0.97037 0.979657 0.733209 0.963141 0.987097 177 179 chr1 117720673 117726833 chr1:117720673-117726833:+:L1PA4:REF 6 + L1PA4 REF full-length 2102Ep,HepG2,MRC5,HEK293T,K562,MCF7 0.848214 0.5125 0.80814 0.490385 0.368421 0.947917 178 180 chr1 118280887 118286905 chr1:118280887-118286905:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.519793 0.774566 0.765432 0.714773 0.948515 0.521858 0.0189873 0.973251 0.629235 0.848276 0.95057 0.946154 179 181 chr1 118568232 118574250 chr1:118568232-118574250:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.276756 0.0754438 0.519352 0.332801 0.552691 0.102804 0.0101382 0.23653 0.270051 0.58156 0.772767 0.801743 180 182 chr1 118780673 118781737 chr1:118780673-118781737:-:L1PA7:REF 4 - L1PA7 REF 3prime-truncated BJ,HeLaS3,MCF7,HCT116 0.5 0.0 0.0 0.0 181 183 chr1 118831438 118837583 chr1:118831438-118837583:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.791667 0.563866 0.767352 0.513479 0.574669 0.117021 0.0115979 0.657296 0.763466 0.642857 0.830579 0.890323 182 184 chr1 118852351 118858380 chr1:118852351-118858380:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.120646 0.943514 0.877054 0.790613 0.887243 0.807202 0.01348 0.485368 0.921263 0.714368 0.94907 0.719675 Gardner_2017:13,Rodriguez-Martin_2020:43,Solyom_2012b:1,Tubio_2014:7 183 185 chr1 119020631 119026648 chr1:119020631-119026648:+:L1PA3:REF 12 + L1PA3 REF full-length WARS2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.900215 0.979968 0.949965 0.966375 0.954672 0.949853 0.550388 0.969894 0.918394 0.894231 0.982893 0.943089 184 186 chr1 119152510 119157417 chr1:119152510-119157417:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated WARS2-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.93956 0.979094 0.965517 0.983791 0.961707 0.98419 0.956912 0.975728 0.97249 0.946667 0.965695 0.971074 185 187 chr1 119497647 119500000 chr1:119497647-119500000:+:L1P1:REF 12 + L1P1 REF 3prime-truncated HSD3B1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.8 0.184211 0.495495 0.376559 0.56 0.0758621 0.0 0.861702 0.713043 0.466667 0.8125 0.851064 186 188 chr1 120478166 120480272 chr1:120478166-120480272:+:L1P2:REF 12 + L1P2 REF 3prime-truncated LOC100996724 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.845 0.934211 0.975309 0.948148 0.871795 0.382114 0.953704 0.967532 0.85119 0.959016 0.955128 0.964286 187 189 chr1 120480723 120486850 chr1:120480723-120486850:+:L1PA6:REF 7 + L1PA6 REF full-length LOC100996724 2102Ep,HepG2,MRC5,HEK293T,MCF7,IMR90,HEK293 0.307692 0.3 0.42 0.333333 0.377778 0.344828 0.384615 188 190 chr1 121532230 121538261 chr1:121532230-121538261:-:L1HS:REF 12 - L1HS REF full-length EMBP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.062201 0.983362 0.866295 0.872382 0.958333 0.863931 0.0381844 0.962141 0.952059 0.86456 0.956484 0.908654 Rodriguez-Martin_2020:1,Tubio_2014:1 189 191 chr1 121574289 121580421 chr1:121574289-121580421:+:L1PA3:REF 12 + L1PA3 REF full-length EMBP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.875463 0.977003 0.809561 0.800494 0.935572 0.546779 0.0222497 0.925311 0.860809 0.731744 0.953964 0.941844 190 192 chr1 121598206 121604319 chr1:121598206-121604319:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.884685 0.941704 0.322645 0.350906 0.501529 0.145833 0.00498753 0.889671 0.585366 0.286364 0.766 0.789744 191 193 chr1 125122961 125129081 chr1:125122961-125129081:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.395415 0.327808 0.387226 0.376448 0.306684 0.271242 0.00921659 0.344519 0.34715 0.354354 0.355818 0.428378 192 194 chr1 143558090 143564124 chr1:143558090-143564124:-:L1PA2:REF 10 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.0913242 0.638498 0.455357 0.726619 0.872054 0.733068 0.0779221 0.858333 0.544118 0.958333 193 195 chr1 145553326 145559446 chr1:145553326-145559446:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895954 0.588907 0.884937 0.87125 0.766097 0.679634 0.0526316 0.940246 0.966912 0.83165 0.940577 0.951768 194 196 chr1 145559888 145561994 chr1:145559888-145561994:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.833333 0.182692 0.675676 0.67101 0.452128 0.0921053 0.240506 0.847328 0.671756 0.622449 0.741935 0.764706 195 197 chr1 146053739 146054360 chr1:146053739-146054360:-:L1P2:REF 10 - L1P2 REF 3prime-truncated LINC01719 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.83631 0.778443 0.686869 0.693089 0.818627 0.60119 0.678571 0.746411 0.746914 0.733333 196 198 chr1 146717192 146723218 chr1:146717192-146723218:-:L1HS:REF 12 - L1HS REF full-length HYDIN2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.135499 0.879007 0.931034 0.889305 0.938857 0.778191 0.0928697 0.974127 0.948421 0.890244 0.946119 0.942282 197 199 chr1 147006520 147012672 chr1:147006520-147012672:+:L1PA5:REF 11 + L1PA5 REF full-length LOC728989 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.673004 0.0309278 0.440252 0.350413 0.449541 0.110672 0.0 0.90099 0.639831 0.430657 0.574713 198 200 chr1 147063913 147070066 chr1:147063913-147070066:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.821612 0.484916 0.499182 0.455912 0.56592 0.348195 0.0101833 0.790345 0.72344 0.491349 0.664683 0.778226 199 201 chr1 147321798 147327814 chr1:147321798-147327814:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.162204 0.384122 0.73792 0.804471 0.276368 0.464355 0.0299936 0.163379 0.924649 0.796235 0.914239 0.672938 200 202 chr1 147402384 147408529 chr1:147402384-147408529:+:L1PA4:REF 12 + L1PA4 REF full-length LINC00624 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.864183 0.0271967 0.679506 0.776024 0.42251 0.374481 0.0201729 0.0416357 0.890217 0.752 0.813837 0.913475 201 203 chr1 147423218 147429241 chr1:147423218-147429241:+:L1PA2:REF 12 + L1PA2 REF full-length LINC00624 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.111173 0.724409 0.748753 0.818545 0.498797 0.738115 0.0137931 0.713291 0.974741 0.756385 0.72265 0.855538 202 204 chr1 147854575 147860678 chr1:147854575-147860678:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated MRC5 0.3 203 205 chr1 149035016 149041138 chr1:149035016-149041138:-:L1PA6:REF 12 - L1PA6 REF full-length PDE4DIP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.9 0.653944 0.948949 0.919732 0.79596 0.191489 0.745098 0.878319 0.903904 0.734884 0.929919 0.903704 204 206 chr1 149041584 149043689 chr1:149041584-149043689:-:L1P2:REF 12 - L1P2 REF 3prime-truncated PDE4DIP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.848649 0.318408 0.79562 0.7525 0.654639 0.170732 0.376068 0.888889 0.597315 0.658915 0.814394 0.843137 205 207 chr1 152547782 152553918 chr1:152547782-152553918:-:L1PA4:REF 11 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.8 0.0392157 0.472222 0.507937 0.219858 0.321429 0.0 0.4375 0.65 0.422222 0.471264 206 208 chr1 152830284 152836378 chr1:152830284-152836378:+:L1PA4:REF 12 + L1PA4 REF full-length LCE1A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890173 0.669643 0.577465 0.404082 0.273292 0.0778032 0.0123762 0.896635 0.716216 0.684066 0.886497 0.804167 207 209 chr1 157315264 157319281 chr1:157315264-157319281:+:L1PA6:REF 2 + L1PA6 REF 3prime-truncated MRC5,HEK293T 0.0434783 0.1 208 210 chr1 157423979 157426841 chr1:157423979-157426841:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87156 0.0578512 0.708333 0.215385 0.72 0.1875 0.2125 0.777778 0.180723 0.277778 0.808219 0.902439 209 211 chr1 158215799 158221947 chr1:158215799-158221947:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.852713 0.0187793 0.103448 0.125786 0.00398406 0.0141844 0.0264901 0.232432 0.03 0.136364 0.00564972 0.761364 210 212 chr1 158277782 158280197 chr1:158277782-158280197:-:L1P1:REF 12 - L1P1 REF 3prime-truncated CD1C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891001 0.196474 0.453834 0.421184 0.17 0.052 0.00701754 0.481618 0.433498 0.461017 0.377327 0.864286 211 213 chr1 158314659 158320685 chr1:158314659-158320685:-:L1PA3:REF 12 - L1PA3 REF full-length CD1B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.72784 0.419226 0.689063 0.611441 0.265023 0.468006 0.0100719 0.505946 0.825662 0.721619 0.809649 0.940711 212 214 chr1 158336097 158342236 chr1:158336097-158342236:+:L1PA4:REF 12 + L1PA4 REF full-length CD1B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.854342 0.0848485 0.520833 0.467514 0.0640669 0.258065 0.0 0.323077 0.307692 0.431953 0.411765 0.875862 213 215 chr1 158431089 158433509 chr1:158431089-158433509:-:L1PA7:REF 2 - L1PA7 REF 3prime-truncated HepG2,K562 0.0 0.0 214 216 chr1 158886103 158892114 chr1:158886103-158892114:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.690037 0.438218 0.602041 0.520443 0.246639 0.49241 0.129508 0.354756 0.652393 0.64 0.591304 0.691265 215 217 chr1 159452953 159458976 chr1:159452953-159458976:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.713925 0.623945 0.848915 0.756763 0.421351 0.844611 0.0309524 0.326696 0.741135 0.734156 0.649171 0.905415 216 218 chr1 159568953 159575104 chr1:159568953-159575104:-:L1PA3:REF 10 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.853933 0.294686 0.611111 0.587248 0.115242 0.206612 0.0 0.459259 0.662921 0.5 217 219 chr1 159603762 159609902 chr1:159603762-159609902:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.857843 0.363257 0.514151 0.532537 0.0666667 0.00569801 0.207048 0.310112 0.447619 0.50774 0.776316 218 220 chr1 159616079 159622573 chr1:159616079-159622573:+:L1PA7:REF 1 + L1PA7 REF full-length MRC5 0.418605 219 221 chr1 160389117 160391036 chr1:160389117-160391036:-:L1PA6:REF 11 - L1PA6 REF 3prime-truncated VANGL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.871795 0.268519 0.4125 0.392226 0.427632 0.0731707 0.0769231 0.926471 0.78125 0.891566 0.923077 220 222 chr1 160892554 160894885 chr1:160892554-160894885:+:L1PA5:REF 1 + L1PA5 REF 3prime-truncated ITLN1 2102Ep 0.25 221 223 chr1 161692858 161699312 chr1:161692858-161699312:+:L1PA8:REF 12 + L1PA8 REF full-length RPL31P11 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905782 0.221294 0.669782 0.724422 0.863281 0.342222 0.453216 0.938776 0.942424 0.703125 0.936986 0.939086 222 224 chr1 161832290 161834271 chr1:161832290-161834271:+:L1P1:REF 12 + L1P1 REF 3prime-truncated ATF6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.927174 0.167442 0.984241 0.984108 0.93063 0.978887 0.914062 0.97561 0.837766 0.983333 0.9747 0.971979 223 225 chr1 163639993 163646040 chr1:163639993-163646040:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.043864 0.761978 0.900148 0.832377 0.479983 0.616065 0.0157426 0.916427 0.955878 0.887051 0.874265 0.944393 224 226 chr1 163750240 163756258 chr1:163750240-163756258:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868613 0.648873 0.853629 0.53983 0.156891 0.00674764 0.669333 0.94 0.630607 0.54717 0.923288 225 227 chr1 163848424 163854546 chr1:163848424-163854546:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.776812 0.0915888 0.782334 0.408788 0.0386473 0.0725191 0.00884956 0.758621 0.840491 0.603448 0.292169 0.740458 226 228 chr1 164121630 164127072 chr1:164121630-164127072:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.800898 0.317497 0.694737 0.672951 0.318777 0.491736 0.0117647 0.00995025 0.755981 0.860068 0.676752 0.767273 227 229 chr1 164216021 164222185 chr1:164216021-164222185:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.945871 0.689433 0.83345 0.802771 0.862803 0.853414 0.0205237 0.861084 0.984211 0.817054 0.952449 0.961333 228 230 chr1 164459203 164465253 chr1:164459203-164465253:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.137255 0.74266 0.862543 0.846037 0.902067 0.814961 0.0251046 0.807487 0.97 0.826255 0.960692 0.938462 229 231 chr1 165583897 165583899 chr1:165583897-165583899:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip424,1KGP:L1_umary_LINE1_157,Philippe:EXP_ID_0077 LRRC52-AS1 MCF7,IMR90 0.960784 0.837079 Rodriguez-Martin_2020:1,Tubio_2014:1 230 232 chr1 165778069 165784153 chr1:165778069-165784153:-:L1PA4:REF 12 - L1PA4 REF full-length TMCO1-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910615 0.923259 0.835294 0.904218 0.711467 0.860511 0.648248 0.768116 0.978947 0.883333 0.918406 0.95057 231 233 chr1 165801132 165801791 chr1:165801132-165801791:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863229 0.377984 0.763423 0.864345 0.699888 0.604418 0.193548 0.923581 0.956386 0.816327 0.910658 0.924883 232 234 chr1 166100204 166106364 chr1:166100204-166106364:+:L1PA4:REF 12 + L1PA4 REF full-length FAM78B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.75237 0.259398 0.560501 0.621691 0.348361 0.193141 0.00414365 0.832447 0.591125 0.554839 0.765861 0.909621 233 235 chr1 166243053 166249084 chr1:166243053-166249084:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.119055 0.853088 0.801884 0.81075 0.585248 0.768123 0.050564 0.522613 0.572034 0.835841 0.91052 0.845251 234 236 chr1 166310878 166317027 chr1:166310878-166317027:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.851642 0.0486284 0.501279 0.46532 0.230916 0.0767544 0.0135135 0.296451 0.460548 0.557803 0.56899 0.881356 235 237 chr1 166411299 166417438 chr1:166411299-166417438:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.785021 0.226913 0.369963 0.391753 0.0717423 0.09 0.00688468 0.230548 0.351823 0.39207 0.580198 0.757848 236 238 chr1 168348862 168354879 chr1:168348862-168354879:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0403906 0.00636075 0.931754 0.908941 0.651127 0.964734 0.772021 0.922535 0.981299 0.918054 0.980958 0.929204 237 239 chr1 169251561 169257591 chr1:169251561-169257591:-:L1PA2:REF 12 - L1PA2 REF full-length NME7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.825816 0.937591 0.975258 0.903831 0.962144 0.975494 0.857985 0.978826 0.976051 0.903869 0.969436 0.968316 238 240 chr1 169275508 169279839 chr1:169275508-169279839:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated NME7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889524 0.944809 0.979351 0.95996 0.932389 0.967161 0.861378 0.959707 0.987768 0.979021 0.96846 0.951737 239 241 chr1 169655961 169661033 chr1:169655961-169661033:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.89916 0.785714 0.764045 0.764957 0.867769 0.171429 0.0 0.606383 0.533981 0.6 0.868132 0.862745 240 242 chr1 170089171 170095201 chr1:170089171-170095201:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.202625 0.319703 0.938346 0.829144 0.42426 0.803347 0.0241128 0.133943 0.921911 0.906518 0.879132 0.948399 241 243 chr1 170568879 170575370 chr1:170568879-170575370:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.939314 0.628846 0.903846 0.906344 0.867347 0.477064 0.00502513 0.906061 0.952941 0.816667 0.838542 0.944444 242 244 chr1 170612496 170614981 chr1:170612496-170614981:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.97619 0.125 1.0 0.957854 0.849462 0.347222 0.0 0.638889 1.0 0.947368 0.941176 1.0 243 245 chr1 171373586 171379567 chr1:171373586-171379567:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.130124 0.942107 0.946586 0.957357 0.420684 0.446043 0.0386889 0.0394118 0.906569 0.976382 0.806067 244 246 chr1 171694693 171696421 chr1:171694693-171696421:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated VAMP4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878891 0.855026 0.942731 0.984854 0.913849 0.907583 0.773676 0.740048 0.985418 0.985006 0.931499 0.944818 245 247 chr1 172055829 172061861 chr1:172055829-172061861:+:L1PA3:REF 12 + L1PA3 REF full-length DNM3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.710699 0.649787 0.946552 0.966323 0.890995 0.926344 0.0130933 0.0776699 0.976423 0.97017 0.978697 0.943765 246 248 chr1 172314246 172320395 chr1:172314246-172320395:+:L1PA3:REF 12 + L1PA3 REF full-length DNM3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.904459 0.313842 0.918288 0.9648 0.895861 0.875606 0.0100287 0.924383 0.964407 0.925926 0.88 0.957031 247 249 chr1 172981279 172987306 chr1:172981279-172987306:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.598385 0.713099 0.842399 0.868882 0.51137 0.771913 0.0425834 0.779018 0.974189 0.974322 0.80235 0.817185 248 250 chr1 173131954 173132374 chr1:173131954-173132374:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated HCT116 0.0 249 251 chr1 173153744 173159905 chr1:173153744-173159905:+:L1PA4:REF 11 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.9 0.457143 0.895652 0.954225 0.0649351 0.695238 0.0 0.253333 0.97037 0.466667 0.985507 250 252 chr1 173725764 173731872 chr1:173725764-173731872:+:L1PA4:REF 12 + L1PA4 REF full-length KLHL20 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.904762 0.963511 0.983942 0.98564 0.948196 0.972093 0.986245 0.962707 0.988994 0.965157 0.967552 0.976589 251 253 chr1 173811694 173816857 chr1:173811694-173816857:+:L1PA6:REF 9 + L1PA6 REF 3prime-truncated CENPL 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.961538 1.0 1.0 0.950617 0.962264 0.916667 0.978261 1.0 0.95 252 254 chr1 174233266 174239293 chr1:174233266-174239293:-:L1PA2:REF 12 - L1PA2 REF full-length RABGAP1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0227099 0.946474 0.98309 0.982933 0.00992608 0.94958 0.949444 0.00816434 0.44268 0.983146 0.951268 0.732417 253 255 chr1 174377791 174383815 chr1:174377791-174383815:-:L1PA2:REF 12 - L1PA2 REF full-length RABGAP1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.128272 0.945838 0.975593 0.981925 0.951693 0.967497 0.954045 0.872192 0.98504 0.974724 0.9745 0.956332 254 256 chr1 174541788 174545718 chr1:174541788-174545718:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated RABGAP1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.893333 0.995349 0.910394 0.927083 0.933333 0.912 0.712418 0.992308 0.98556 0.956522 0.968627 0.954545 255 257 chr1 174590323 174596379 chr1:174590323-174596379:-:L1HS:REF 12 - L1HS REF full-length RABGAP1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.048526 0.967543 0.932783 0.956721 0.945118 0.907573 0.7522 0.969388 0.980331 0.918739 0.972394 0.922957 Brouha_2003:0.3 256 258 chr1 174610057 174616228 chr1:174610057-174616228:-:L1PA3:REF 12 - L1PA3 REF full-length RABGAP1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896266 0.961585 0.930791 0.950647 0.902844 0.832994 0.713333 0.941548 0.983942 0.910448 0.945588 0.953975 257 259 chr1 174843226 174849243 chr1:174843226-174849243:-:L1PA2:REF 12 - L1PA2 REF full-length RABGAP1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.117969 0.492212 0.967359 0.982048 0.0145894 0.900149 0.0114314 0.236498 0.0118983 0.927673 0.905333 0.645554 258 260 chr1 175992256 175998501 chr1:175992256-175998501:+:L1PA3:REF 12 + L1PA3 REF full-length COP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.955287 0.981301 0.984359 0.985878 0.982691 0.976517 0.978495 0.974759 0.989938 0.988048 0.96142 0.971897 259 261 chr1 176002354 176008367 chr1:176002354-176008367:-:L1PA2:REF 12 - L1PA2 REF full-length COP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.86904 0.987022 0.983851 0.957124 0.968384 0.978592 0.973974 0.977967 0.985463 0.988557 0.977747 0.984139 260 262 chr1 176256085 176262110 chr1:176256085-176262110:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.120624 0.839468 0.89126 0.893361 0.910309 0.940792 0.0812888 0.936108 0.966761 0.898228 0.951998 0.937181 261 263 chr1 176295052 176297228 chr1:176295052-176297228:-:L1P2:REF 9 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293 0.906667 0.0576923 0.340909 0.218121 0.0416667 0.208333 0.482143 0.305085 0.263158 262 264 chr1 176308395 176314388 chr1:176308395-176314388:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0264317 0.842581 0.77546 0.724832 0.498039 0.867925 0.0609884 0.918919 0.921495 0.79602 0.850394 0.907539 263 265 chr1 177400917 177406941 chr1:177400917-177406941:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883095 0.800256 0.826781 0.875556 0.836601 0.67121 0.0292276 0.47493 0.898455 0.892388 0.965217 0.973684 264 266 chr1 177633927 177639946 chr1:177633927-177639946:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.238983 0.799825 0.711528 0.734639 0.278516 0.438148 0.00687961 0.969188 0.783571 0.803298 0.829012 0.855403 265 267 chr1 177671810 177677946 chr1:177671810-177677946:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.825397 0.671167 0.623188 0.600667 0.340798 0.253608 0.0163934 0.955267 0.737789 0.726636 0.729378 0.921519 266 268 chr1 177692529 177698661 chr1:177692529-177698661:+:L1PA5:REF 1 + L1PA5 REF full-length LINC01741 MRC5 0.380952 267 269 chr1 177759403 177765545 chr1:177759403-177765545:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910364 0.783307 0.857143 0.84287 0.497272 0.735143 0.0117347 0.814307 0.771507 0.78273 0.725182 0.85296 268 270 chr1 178198365 178199441 chr1:178198365-178199441:-:L1P2:REF 1 - L1P2 REF 3prime-truncated RASAL2 MRC5 0.202934 269 271 chr1 178314791 178320818 chr1:178314791-178320818:-:L1PA2:REF 12 - L1PA2 REF full-length RASAL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0953902 0.981187 0.843137 0.576623 0.539971 0.965074 0.146614 0.965889 0.982844 0.93558 0.317343 0.576408 270 272 chr1 178837547 178843666 chr1:178837547-178843666:+:L1PA2:REF 12 + L1PA2 REF full-length RALGPS2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.825203 0.846695 0.840376 0.845948 0.817518 0.839921 0.0263158 0.846154 0.851852 0.839763 0.843564 0.824324 271 273 chr1 178987591 178993573 chr1:178987591-178993573:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891576 0.398305 0.781071 0.831159 0.837877 0.783314 0.0712303 0.949455 0.959225 0.815589 0.907484 0.927509 272 274 chr1 179460043 179466249 chr1:179460043-179466249:-:L1PA5:REF 12 - L1PA5 REF full-length AXDND1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.785235 0.19523 0.644593 0.596423 0.42437 0.226725 0.00679694 0.885457 0.972536 0.631367 0.707779 0.895375 273 275 chr1 179535223 179541461 chr1:179535223-179541461:-:L1PA6:REF 1 - L1PA6 REF full-length AXDND1 MRC5 0.00584795 274 276 chr1 179606225 179606227 chr1:179606225-179606227:-:L1HS:NONREF 8 - L1HS KNR euL1db:mrip465,Philippe:EXP_ID_0092 TDRD5 2102Ep,MRC5,HEK293T,HeLaS3,K562,MCF7,HEK293,H1 0.0537489 0.801277 0.820316 0.870748 0.0775692 0.895798 0.946789 0.885456 Beck_2010:11.0 Rodriguez-Martin_2020:6 275 277 chr1 179684052 179690195 chr1:179684052-179690195:-:L1PA5:REF 3 - L1PA5 REF full-length TDRD5 MRC5,HeLaS3,K562 0.738636 0.511628 0.0 276 278 chr1 179694053 179700429 chr1:179694053-179700429:+:L1PA7:REF 11 + L1PA7 REF full-length TDRD5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.925926 0.0333333 0.210526 0.254902 0.357143 0.0769231 0.0 1.0 0.904762 0.0952381 0.777778 277 279 chr1 180333571 180339694 chr1:180333571-180339694:+:L1PA5:REF 11 + L1PA5 REF full-length ACBD6 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.941368 0.988287 0.980479 0.974211 0.971687 0.972323 0.623037 0.978041 0.960976 0.974522 0.969055 278 280 chr1 180866811 180872843 chr1:180866811-180872843:-:L1HS:REF 12 - L1HS REF full-length XPR1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0849138 0.982043 0.94057 0.964109 0.966281 0.975472 0.90687 0.951607 0.951349 0.874733 0.97484 0.663024 Brouha_2003:0.2 279 281 chr1 181882227 181886068 chr1:181882227-181886068:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.795918 0.0344828 0.387352 0.520349 0.0401235 0.120219 0.0805687 0.0652174 0.763033 0.410714 0.696581 0.868056 280 282 chr1 183658067 183664223 chr1:183658067-183664223:+:L1PA3:REF 12 + L1PA3 REF full-length RGL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.897502 0.970847 0.971243 0.985374 0.907461 0.787546 0.182741 0.0812937 0.489974 0.949891 0.971936 0.975285 281 283 chr1 183748695 183752008 chr1:183748695-183752008:-:L1PA7:REF 11 - L1PA7 REF 3prime-truncated RGL1 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.766798 0.925926 0.781553 0.875862 0.763158 0.0 0.720588 0.863636 0.744444 0.817308 0.88 282 284 chr1 184000536 184000538 chr1:184000536-184000538:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip472 COLGALT2 HCT116 0.695722 283 285 chr1 184130573 184136757 chr1:184130573-184136757:-:L1PA4:REF 11 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.888522 0.265258 0.849343 0.927429 0.689346 0.120968 0.012987 0.818545 0.960956 0.92437 0.953211 284 286 chr1 184231780 184235388 chr1:184231780-184235388:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902284 0.213659 0.853659 0.927982 0.76087 0.13128 0.00948509 0.968668 0.943902 0.933333 0.836449 0.943452 285 287 chr1 184845616 184851641 chr1:184845616-184851641:+:L1HS:REF 6 + L1HS REF full-length FAM129A 2102Ep,BJ,HeLaS3,K562,HCT116,IMR90 0.159629 0.971408 0.890909 0.940204 0.966667 0.973349 286 288 chr1 185001530 185007555 chr1:185001530-185007555:+:L1PA3:REF 12 + L1PA3 REF full-length LINC01633 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.240956 0.757718 0.884135 0.949824 0.926286 0.303093 0.205988 0.837893 0.489277 0.935315 0.946872 0.882911 287 289 chr1 185251798 185257805 chr1:185251798-185257805:-:L1PA2:REF 12 - L1PA2 REF full-length SWT1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.292636 0.96966 0.944172 0.967904 0.00576586 0.00341964 0.967092 0.394737 0.00495616 0.951644 0.962403 0.874254 288 290 chr1 185378615 185384739 chr1:185378615-185384739:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91606 0.907483 0.935444 0.815563 0.851461 0.81677 0.251811 0.274448 0.966065 0.924067 0.888301 0.928113 289 291 chr1 185637653 185639064 chr1:185637653-185639064:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated LINC01350 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.848827 0.27956 0.834518 0.805573 0.613293 0.483918 0.00547046 0.917401 0.963536 0.684211 0.855544 0.953908 290 292 chr1 185707397 185713577 chr1:185707397-185713577:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910924 0.30274 0.807463 0.823853 0.916084 0.545946 0.0212389 0.905405 0.968386 0.838509 0.937743 0.917647 291 293 chr1 185887306 185893334 chr1:185887306-185893334:-:L1PA2:REF 12 - L1PA2 REF full-length HMCN1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.568598 0.119146 0.925714 0.924623 0.616532 0.623003 0.0191257 0.933988 0.961437 0.920304 0.8639 0.937381 292 294 chr1 186157489 186163560 chr1:186157489-186163560:-:L1PA3:REF 12 - L1PA3 REF full-length HMCN1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.85049 0.0213144 0.92517 0.956276 0.836735 0.357143 0.6 0.573696 0.940625 0.965 0.926667 0.891566 293 295 chr1 186256600 186262729 chr1:186256600-186262729:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863717 0.433424 0.79386 0.836718 0.601911 0.926247 0.0896947 0.961818 0.961694 0.792157 0.840304 0.93125 294 296 chr1 186637331 186643356 chr1:186637331-186643356:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.0732532 0.910924 0.700441 0.817204 0.130684 0.9862 0.9179 0.974488 0.780523 0.959397 0.274203 295 297 chr1 187090442 187090835 chr1:187090442-187090835:-:L1P1:REF 12 - L1P1 REF 3prime-truncated LINC01036 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.75 0.578864 0.677083 0.820355 0.716846 0.788177 0.314465 0.714286 0.992063 0.868421 0.645161 0.936782 296 298 chr1 187343764 187349794 chr1:187343764-187349794:-:L1HS:REF 12 - L1HS REF full-length LINC01036 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.134877 0.812129 0.754896 0.94678 0.830679 0.848715 0.18793 0.964732 0.978099 0.943396 0.809391 0.972129 Brouha_2003:0.0 Gardner_2017:1 297 299 chr1 187396521 187398126 chr1:187396521-187398126:+:L1PA7:REF 6 + L1PA7 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,K562,HEK293 0.0588235 0.0 0.269231 0.0 0.0 0.05 298 300 chr1 187597671 187603699 chr1:187597671-187603699:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.85 0.75 0.807111 0.960934 0.852523 0.864542 0.0267261 0.927966 0.979097 0.940678 0.791709 0.951501 Brouha_2003:0.3 299 301 chr1 188752216 188758260 chr1:188752216-188758260:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.156125 0.780807 0.769377 0.886724 0.914276 0.945704 0.0620856 0.97469 0.976927 0.903427 0.890305 0.960114 300 302 chr1 189325284 189331428 chr1:189325284-189331428:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.774424 0.441197 0.621556 0.854906 0.634745 0.729323 0.415344 0.656966 0.922222 0.898089 0.639184 0.915074 301 303 chr1 189468736 189474768 chr1:189468736-189474768:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885423 0.745059 0.775116 0.946451 0.92881 0.947932 0.342342 0.955466 0.981161 0.947879 0.897415 0.964476 302 304 chr1 189754801 189760951 chr1:189754801-189760951:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.823797 0.785877 0.696741 0.98042 0.865106 0.818611 0.00779626 0.882007 0.924804 0.948193 0.84732 0.925577 303 305 chr1 191373465 191378940 chr1:191373465-191378940:-:L1PA6:REF 9 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293 0.25 0.0128205 0.192308 0.398649 0.227273 0.102564 0.0681818 0.117647 0.151163 304 306 chr1 191442810 191448889 chr1:191442810-191448889:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.971264 0.652968 0.804124 0.91704 0.827751 0.734848 0.256757 0.990868 0.946809 0.933333 0.815068 0.955224 305 307 chr1 192500584 192506612 chr1:192500584-192506612:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.406306 0.858367 0.95683 0.959395 0.943343 0.946083 0.0433145 0.939394 0.978301 0.968023 0.955175 0.966924 306 308 chr1 192662965 192669094 chr1:192662965-192669094:-:L1PA6:REF 12 - L1PA6 REF full-length RGS13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.737991 0.853448 0.994048 0.704246 0.844221 0.987805 0.0 0.742138 0.847953 0.957143 0.885845 0.704545 307 309 chr1 193717837 193723892 chr1:193717837-193723892:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0922064 0.716036 0.948877 0.941066 0.966229 0.943154 0.0708427 0.928869 0.909176 0.896199 0.973967 0.936449 308 310 chr1 196219370 196225402 chr1:196219370-196225402:-:L1HS:REF 12 - L1HS REF full-length KCNT2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0581427 0.856205 0.90832 0.965316 0.886987 0.83657 0.316708 0.622691 0.984488 0.957861 0.873042 0.977008 Rodriguez-Martin_2020:3,Tubio_2014:1 309 311 chr1 196780803 196786955 chr1:196780803-196786955:-:L1PA3:REF 8 - L1PA3 REF full-length CFHR3 HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.748252 0.825175 0.816901 0.00328947 0.835938 0.220183 0.97037 0.856 310 312 chr1 196817000 196818070 chr1:196817000-196818070:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated CFHR1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.455814 0.261214 0.555556 0.595525 0.608081 0.417004 0.0774648 0.539642 0.952778 0.596639 0.52957 0.940476 311 313 chr1 196935962 196942099 chr1:196935962-196942099:-:L1PA6:REF 12 - L1PA6 REF full-length CFHR2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.537234 0.135647 0.333333 0.528302 0.380567 0.297468 0.0886076 0.269076 0.871921 0.45679 0.306604 0.774648 312 314 chr1 196986363 196992657 chr1:196986363-196992657:-:L1PA6:REF 12 - L1PA6 REF full-length CFHR5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.624573 0.226974 0.660377 0.846809 0.654206 0.230769 0.0240964 0.304348 0.954545 0.805128 0.699164 0.888889 313 315 chr1 197571942 197572940 chr1:197571942-197572940:+:L1PA6:REF 2 + L1PA6 REF 3prime-truncated DENND1B 2102Ep,MRC5 0.2 0.20135 314 316 chr1 197707714 197713746 chr1:197707714-197713746:+:L1HS:REF 12 + L1HS REF full-length DENND1B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0842953 0.986177 0.955395 0.984523 0.964347 0.963753 0.958546 0.967326 0.982673 0.932862 0.984318 0.888456 315 317 chr1 197802331 197803141 chr1:197802331-197803141:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.824718 0.319573 0.945445 0.969541 0.945815 0.914131 0.692552 0.973522 0.96648 0.966033 0.977827 0.947368 316 318 chr1 197882825 197884983 chr1:197882825-197884983:-:L1P3:REF 7 - L1P3 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,HEK293 0.868421 0.727273 0.970588 0.95 0.875 0.545455 0.916667 317 319 chr1 198309446 198315462 chr1:198309446-198315462:-:L1PA3:REF 12 - L1PA3 REF full-length NEK7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.110169 0.96921 0.988618 0.966467 0.92549 0.97996 0.949713 0.910569 0.971599 0.98008 0.916484 0.808 318 320 chr1 199647362 199653472 chr1:199647362-199653472:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.842105 0.569288 0.545455 0.8075 0.677966 0.296089 0.0 0.60251 0.966019 0.72449 0.823204 0.962963 319 321 chr1 201234105 201240262 chr1:201234105-201240262:-:L1PA3:REF 12 - L1PA3 REF full-length IGFN1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.904063 0.82761 0.822153 0.837057 0.925459 0.68552 0.0201294 0.931228 0.923267 0.843662 0.905675 0.925878 320 322 chr1 203256484 203257899 chr1:203256484-203257899:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885653 0.429921 0.781711 0.684517 0.592062 0.531418 0.0107692 0.634667 0.726736 0.845433 0.857735 0.901932 321 323 chr1 205400697 205406859 chr1:205400697-205406859:-:L1PA3:REF 9 - L1PA3 REF full-length LEMD1 2102Ep,HepG2,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.927536 0.767196 0.783069 0.900662 0.183099 0.915966 0.55 0.859155 0.984733 322 324 chr1 205899308 205901278 chr1:205899308-205901278:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated LOC284581 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910097 0.634969 0.971311 0.922489 0.91404 0.487751 0.0153257 0.973231 0.967684 0.823362 0.917308 0.983539 323 325 chr1 207206734 207212907 chr1:207206734-207212907:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.93099 0.91446 0.747588 0.884912 0.621485 0.977558 0.920492 0.941869 0.974701 0.672199 0.831159 0.952518 324 326 chr1 207659532 207660480 chr1:207659532-207660480:+:L1P2:REF 1 + L1P2 REF 3prime-truncated CR1L MRC5 0.0111111 325 327 chr1 207730466 207736495 chr1:207730466-207736495:+:L1PA2:REF 12 + L1PA2 REF full-length CR1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.741899 0.697389 0.918297 0.951456 0.890238 0.970609 0.972024 0.804813 0.976494 0.894536 0.963535 0.957227 326 328 chr1 208702694 208709029 chr1:208702694-208709029:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.894535 0.44428 0.815433 0.706019 0.599677 0.337931 0.0217186 0.848635 0.85566 0.745856 0.837838 0.924706 327 329 chr1 209913771 209919823 chr1:209913771-209919823:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0311811 0.851029 0.961355 0.94382 0.860882 0.862213 0.0274841 0.882685 0.945229 0.868263 0.972069 0.91926 Brouha_2003:0.0 328 330 chr1 209973212 209979350 chr1:209973212-209979350:-:L1PA4:REF 12 - L1PA4 REF full-length SYT14 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.764497 0.387136 0.856522 0.828125 0.554535 0.539033 0.0131062 0.566197 0.631117 0.744737 0.793872 0.804795 329 331 chr1 210953899 210960045 chr1:210953899-210960045:-:L1PA6:REF 1 - L1PA6 REF full-length KCNH1 MRC5 0.166667 330 332 chr1 212658025 212664183 chr1:212658025-212664183:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.794709 0.672185 0.736983 0.933516 0.928222 0.625194 0.0463734 0.9599 0.953684 0.939024 0.963151 0.933718 331 333 chr1 213213891 213220019 chr1:213213891-213220019:+:L1PA4:REF 11 + L1PA4 REF full-length RPS6KC1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.977077 0.988265 0.985617 0.978659 0.967795 0.918782 0.975 0.986328 0.904888 0.973134 0.98434 332 334 chr1 213357935 213361681 chr1:213357935-213361681:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863874 0.880952 0.625793 0.745862 0.829921 0.338936 0.0149254 0.831169 0.806794 0.696629 0.901261 0.78882 333 335 chr1 213806434 213808929 chr1:213806434-213808929:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.894505 0.914894 0.748718 0.696246 0.850379 0.524664 0.0883978 0.962121 0.9375 0.798611 0.894459 0.973262 334 336 chr1 214721693 214728105 chr1:214721693-214728105:-:L1PA7:REF 6 - L1PA7 REF full-length HepG2,MRC5,HEK293T,HeLaS3,K562,HEK293 0.52 0.826923 0.383333 0.125 0.0363636 0.648649 335 337 chr1 215362981 215366038 chr1:215362981-215366038:-:L1P2:REF 2 - L1P2 REF 3prime-truncated MRC5,HEK293 0.194444 0.0 336 338 chr1 215697829 215704269 chr1:215697829-215704269:-:L1PA7:REF 6 - L1PA7 REF full-length USH2A HepG2,MRC5,HEK293T,HeLaS3,K562,HEK293 0.486667 0.548872 0.463158 0.183333 0.0 0.636364 337 339 chr1 216485645 216487614 chr1:216485645-216487614:+:L1HS:REF 11 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.330632 0.773077 0.625571 0.672355 0.810056 0.687008 0.0179949 0.525316 0.975 0.700997 0.912752 338 340 chr1 217436931 217438842 chr1:217436931-217438842:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated GPATCH2 MRC5 0.253546 339 341 chr1 217690492 217696523 chr1:217690492-217696523:-:L1PA2:REF 12 - L1PA2 REF full-length SPATA17 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0785714 0.590631 0.859451 0.977679 0.839895 0.867882 0.0519481 0.968276 0.975255 0.941315 0.932874 0.978923 340 342 chr1 218009227 218015252 chr1:218009227-218015252:-:L1HS:REF 6 - L1HS REF full-length 2102Ep,BJ,MRC5,HeLaS3,HCT116,IMR90 0.0995708 0.829437 0.935775 0.686441 0.979412 0.908486 341 343 chr1 219839330 219845537 chr1:219839330-219845537:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.208333 0.262657 0.850885 0.925409 0.655768 0.902582 0.808921 0.9425 0.958031 0.903896 0.979861 0.727428 342 344 chr1 219863570 219869595 chr1:219863570-219869595:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.662802 0.7696 0.699029 0.781157 0.938059 0.766304 0.820383 0.91443 0.963706 0.814286 0.95679 0.934426 343 345 chr1 220115673 220115675 chr1:220115673-220115675:-:L1HS:NONREF 1 - L1HS KNR Philippe:EXP_ID_0109 IARS2 HepG2 0.983471 344 346 chr1 220245155 220246008 chr1:220245155-220246008:+:L1HS:REF 12 + L1HS REF 3prime-truncated RAB3GAP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0679667 0.985075 0.986417 0.985469 0.976002 0.982759 0.96914 0.985849 0.936139 0.978735 0.982743 0.781734 345 347 chr1 220860329 220864396 chr1:220860329-220864396:-:L1PA7:REF 11 - L1PA7 REF 3prime-truncated HLX-AS1 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.810924 0.744681 0.52 0.242424 0.611511 0.00581395 0.477876 0.919355 0.491803 0.772727 0.659341 346 348 chr1 221257453 221263615 chr1:221257453-221263615:-:L1PA5:REF 6 - L1PA5 REF full-length 2102Ep,HepG2,MRC5,HeLaS3,K562,HEK293 0.45 0.223684 0.503676 0.966667 0.0185185 0.692308 347 349 chr1 221383064 221389208 chr1:221383064-221389208:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.888099 0.0533854 0.903061 0.925662 0.632132 0.972431 0.00760456 0.233429 0.900971 0.806557 0.826446 0.920833 348 350 chr1 222405767 222405769 chr1:222405767-222405769:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip595,1KGP:L1_umary_LINE1_227,Philippe:EXP_ID_0110 HepG2 0.935395 Rodriguez-Martin_2020:3 349 351 chr1 223366542 223372687 chr1:223366542-223372687:-:L1PA3:REF 7 - L1PA3 REF full-length SUSD4 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,HCT116,HEK293 0.909722 0.608108 0.772109 0.710204 0.559524 0.973958 0.925287 350 352 chr1 223395534 223401557 chr1:223395534-223401557:-:L1PA2:REF 12 - L1PA2 REF full-length CCDC185 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.206522 0.892262 0.961572 0.979247 0.953008 0.963744 0.873281 0.985475 0.979292 0.977984 0.976483 0.932611 351 353 chr1 223446992 223453023 chr1:223446992-223453023:+:L1PA3:REF 9 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293 0.890688 0.716867 0.826923 0.846154 0.779935 0.127389 0.929293 0.794258 0.894472 352 354 chr1 225055535 225061656 chr1:225055535-225061656:-:L1PA4:REF 12 - L1PA4 REF full-length DNAH14 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.744526 0.787363 0.617886 0.790602 0.799798 0.771765 0.571688 0.784038 0.803661 0.712644 0.794749 0.771331 353 355 chr1 228520690 228526835 chr1:228520690-228526835:-:L1PA4:REF 9 - L1PA4 REF full-length BTNL10 HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.33547 0.730159 0.379688 0.392857 0.0162455 0.966667 0.950266 0.77551 0.59593 354 356 chr1 233821969 233828387 chr1:233821969-233828387:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.834606 0.0196464 0.223837 0.14245 0.0351494 0.0519481 0.00746269 0.81405 0.8125 0.153846 0.296296 0.781421 355 357 chr1 236186351 236192792 chr1:236186351-236192792:-:L1PA7:REF 1 - L1PA7 REF full-length GPR137B MRC5 0.144828 356 358 chr1 237019467 237025494 chr1:237019467-237025494:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.831276 0.797518 0.786919 0.778555 0.783184 0.618074 0.0427491 0.61531 0.858255 0.815789 0.929808 0.893471 357 359 chr1 237075264 237081293 chr1:237075264-237081293:+:L1HS:REF 12 + L1HS REF full-length RYR2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0982368 0.84147 0.852749 0.85338 0.882311 0.776923 0.0166821 0.488756 0.924507 0.899377 0.969076 0.860656 358 360 chr1 238037114 238043265 chr1:238037114-238043265:-:L1PA3:REF 6 - L1PA3 REF full-length HepG2,MRC5,HEK293T,K562,HCT116,HEK293 0.621429 0.824786 0.378882 0.0508475 0.972603 0.664384 359 361 chr1 239623498 239629523 chr1:239623498-239629523:-:L1HS:REF 12 - L1HS REF full-length CHRM3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.054371 0.631123 0.710499 0.721297 0.683482 0.540923 0.019544 0.785411 0.874871 0.822665 0.89005 0.845399 Brouha_2003:0.0 360 362 chr1 239637768 239643908 chr1:239637768-239643908:-:L1PA3:REF 12 - L1PA3 REF full-length CHRM3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.953895 0.386885 0.6 0.632446 0.393316 0.316216 0.0 0.512579 0.828571 0.5125 0.943005 0.883495 361 363 chr1 242045561 242051585 chr1:242045561-242051585:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.203279 0.56073 0.750169 0.725418 0.805172 0.612527 0.010687 0.508629 0.898279 0.702277 0.899821 0.852657 362 364 chr1 242148274 242148276 chr1:242148274-242148276:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip660,Philippe:EXP_ID_0117 PLD5 H1 0.786787 363 365 chr1 242481073 242487222 chr1:242481073-242487222:+:L1PA4:REF 12 + L1PA4 REF full-length PLD5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.9 0.169093 0.580569 0.518188 0.113505 0.160777 0.0174672 0.538314 0.661608 0.565657 0.740191 0.907643 364 366 chr1 244566687 244569386 chr1:244566687-244569386:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated CATSPERE 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.913571 0.371017 0.762488 0.830565 0.44464 0.538881 0.00339367 0.851689 0.951485 0.73211 0.867376 0.946237 365 367 chr1 245816539 245822560 chr1:245816539-245822560:+:L1PA3:REF 12 + L1PA3 REF full-length SMYD3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.824734 0.985869 0.981183 0.91993 0.96381 0.891278 0.960526 0.978441 0.985143 0.976 0.982857 0.970639 366 368 chr1 247621327 247621329 chr1:247621327-247621329:+:L1HS:NONREF 1 + L1HS KNR Philippe:EXP_ID_0120 MRC5 0.648438 367 369 chr1 247687173 247693204 chr1:247687173-247693204:+:L1HS:REF 2 + L1HS REF full-length 2102Ep,HepG2 0.0135135 0.714003 Brouha_2003:12.1 Rodriguez-Martin_2020:6 368 370 chr1 247888322 247894338 chr1:247888322-247894338:-:L1PA2:REF 2 - L1PA2 REF full-length OR2W3 MRC5,IMR90 0.729622 0.628032 369 371 chr1 247954964 247961087 chr1:247954964-247961087:-:L1PA4:REF 12 - L1PA4 REF full-length OR2L13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.734895 0.227045 0.449309 0.482621 0.0775717 0.0993464 0.00923077 0.340517 0.302046 0.497217 0.653731 0.690722 370 372 chr1 248067512 248073636 chr1:248067512-248073636:+:L1PA3:REF 11 + L1PA3 REF full-length OR2L13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.426471 0.356322 0.682927 0.691379 0.423077 0.4375 0.00961538 0.0504202 0.479167 0.678571 0.822785 371 373 chr1 248166557 248172589 chr1:248166557-248172589:-:L1PA2:REF 12 - L1PA2 REF full-length OR2M2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0605898 0.296533 0.612356 0.593903 0.378663 0.489872 0.0135364 0.187864 0.748887 0.623894 0.513213 0.725681 372 374 chr1 248252861 248258877 chr1:248252861-248258877:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.877205 0.581546 0.683296 0.747615 0.295572 0.398785 0.01222 0.20904 0.700985 0.678832 0.717742 0.900735 373 375 chr1 248527957 248533941 chr1:248527957-248533941:+:L1PA3:REF 12 + L1PA3 REF full-length OR2G6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.834512 0.554286 0.647094 0.678699 0.359477 0.409415 0.0396694 0.258638 0.660417 0.696165 0.527536 0.824484 374 376 chr2 799542 805567 chr2:799542-805567:+:L1PA3:REF 12 + L1PA3 REF full-length LINC01115 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.547145 0.622236 0.747079 0.756289 0.843917 0.656699 0.131919 0.0722121 0.836649 0.75378 0.886067 0.877601 375 377 chr2 3030542 3033219 chr2:3030542-3033219:+:L1P1:REF 12 + L1P1 REF 3prime-truncated LINC01250 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905745 0.604142 0.606602 0.559152 0.286554 0.264874 0.00354862 0.214118 0.598448 0.582677 0.68565 0.946352 376 378 chr2 3369246 3375395 chr2:3369246-3375395:+:L1PA3:REF 12 + L1PA3 REF full-length EIPR1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.822683 0.149442 0.89884 0.902994 0.897278 0.005996 0.886351 0.0121723 0.896344 0.895392 0.898158 0.886839 377 379 chr2 3794364 3800395 chr2:3794364-3800395:-:L1PA3:REF 12 - L1PA3 REF full-length DCDC2C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.893491 0.724417 0.744219 0.818182 0.494874 0.596899 0.0792593 0.943243 0.757275 0.842105 0.876348 0.912917 378 380 chr2 4157808 4163833 chr2:4157808-4163833:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.742477 0.292815 0.64049 0.684604 0.134196 0.277008 0.0136452 0.530343 0.587395 0.692668 0.483117 0.915152 379 381 chr2 4642968 4648965 chr2:4642968-4648965:+:L1PA2:REF 12 + L1PA2 REF full-length LINC01249 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.219499 0.667648 0.793317 0.782594 0.395833 0.240217 0.0134003 0.665225 0.741059 0.782866 0.95992 0.919118 380 382 chr2 5860788 5861025 chr2:5860788-5861025:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated MRC5 0.18408 381 383 chr2 9038331 9044482 chr2:9038331-9044482:+:L1PA4:REF 11 + L1PA4 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.86747 0.322769 0.88791 0.777887 0.529412 0.698366 0.939158 0.960422 0.904478 0.796272 0.948925 382 384 chr2 9860962 9867093 chr2:9860962-9867093:+:L1PA4:REF 12 + L1PA4 REF full-length TAF1B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923633 0.970523 0.989507 0.974242 0.977589 0.979452 0.979834 0.985215 0.969218 0.977778 0.971897 0.983158 383 385 chr2 11000000 11002136 chr2:11000000-11002136:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.650673 0.821966 0.895637 0.960511 0.887195 0.699022 0.0717213 0.957822 0.952826 0.959222 0.956394 0.876076 Rodriguez-Martin_2020:7 384 386 chr2 11881460 11887603 chr2:11881460-11887603:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.925 0.44904 0.777555 0.847432 0.42236 0.195876 0.800623 0.851562 0.957265 0.702509 0.946535 0.953704 385 387 chr2 12521757 12527771 chr2:12521757-12527771:-:L1PA2:REF 11 - L1PA2 REF full-length MIR3681HG 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.880627 0.761827 0.918555 0.88487 0.70633 0.615179 0.882935 0.837145 0.763018 0.892086 0.913562 386 388 chr2 13733270 13739284 chr2:13733270-13739284:-:L1PA3:REF 3 - L1PA3 REF full-length BJ,HeLaS3,IMR90 0.573466 0.522472 0.781659 387 389 chr2 14099133 14105291 chr2:14099133-14105291:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.618636 0.50054 0.706806 0.633112 0.229895 0.517185 0.0114613 0.602787 0.68758 0.631579 0.726824 0.940092 388 390 chr2 14501452 14507609 chr2:14501452-14507609:-:L1PA3:REF 2 - L1PA3 REF full-length HepG2,MRC5 0.46 0.913333 389 391 chr2 14783324 14789477 chr2:14783324-14789477:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.828859 0.793662 0.691045 0.665667 0.142125 0.333333 0.0534826 0.878641 0.520124 0.720339 0.656968 0.833333 390 392 chr2 14848064 14854078 chr2:14848064-14854078:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.314673 0.773507 0.799322 0.761381 0.479086 0.572605 0.0178306 0.908345 0.815778 0.787491 0.848973 0.921864 391 393 chr2 15316249 15322384 chr2:15316249-15322384:+:L1PA6:REF 12 + L1PA6 REF full-length NBAS 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.801394 0.982544 0.942222 0.97995 0.959732 0.962617 0.924855 0.966216 0.980057 0.967033 0.970075 0.911765 392 394 chr2 15439500 15445667 chr2:15439500-15445667:+:L1PA3:REF 12 + L1PA3 REF full-length NBAS 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918819 0.980271 0.977569 0.972987 0.962633 0.923739 0.921348 0.967993 0.500373 0.983122 0.968586 0.951302 393 395 chr2 16233958 16235593 chr2:16233958-16235593:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.674247 0.925068 0.763636 0.815844 0.866962 0.738526 0.235897 0.96875 0.9064 0.81457 0.942834 0.919014 394 396 chr2 16593725 16599758 chr2:16593725-16599758:-:L1HS:REF 12 - L1HS REF full-length FAM49A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.286806 0.889265 0.874031 0.880538 0.850622 0.711196 0.0441478 0.958785 0.81991 0.932874 0.942408 0.941043 395 397 chr2 18012016 18018024 chr2:18012016-18018024:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.238462 0.646688 0.880769 0.87822 0.440367 0.607383 0.0932203 0.815789 0.875 0.871795 0.909884 0.921569 396 398 chr2 18140126 18145285 chr2:18140126-18145285:-:L1PA6:REF 8 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116 0.65 0.305439 0.752941 0.621145 0.145985 0.0179211 0.00833333 0.162011 397 399 chr2 18692198 18698337 chr2:18692198-18698337:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.990291 0.876777 0.872 0.92963 0.765517 0.231707 0.00869565 0.987179 0.680556 0.916667 0.819048 0.924528 398 400 chr2 19018405 19020946 chr2:19018405-19020946:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated LINC01376 MRC5 0.809524 399 401 chr2 19089266 19095388 chr2:19089266-19095388:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.827869 0.891753 0.9875 0.748521 0.715686 0.0470588 0.0 0.930233 0.525424 0.987342 0.95122 0.939394 400 402 chr2 19305839 19311862 chr2:19305839-19311862:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0233696 0.828179 0.943424 0.979844 0.684244 0.718535 0.00524109 0.147586 0.962042 0.937304 0.958361 0.926771 401 403 chr2 20872293 20875989 chr2:20872293-20875989:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.844675 0.532391 0.424074 0.443038 0.0223752 0.0855107 0.0154525 0.678261 0.527938 0.451613 0.538745 0.803846 402 404 chr2 20905451 20911612 chr2:20905451-20911612:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.933625 0.74491 0.797456 0.812634 0.383319 0.53542 0.00198413 0.785412 0.810684 0.761404 0.848019 0.937309 403 405 chr2 21208575 21214737 chr2:21208575-21214737:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.900277 0.193253 0.741522 0.869036 0.370593 0.362092 0.224309 0.513398 0.565071 0.772798 0.747243 0.978641 404 406 chr2 21335938 21342064 chr2:21335938-21342064:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.835509 0.447785 0.565163 0.745346 0.178977 0.21366 0.0120482 0.30315 0.353801 0.681704 0.671296 0.890728 405 407 chr2 21903319 21909344 chr2:21903319-21909344:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.537634 0.740099 0.85727 0.962273 0.529105 0.679785 0.00888889 0.367143 0.773148 0.903743 0.789001 0.935123 406 408 chr2 22156442 22162464 chr2:22156442-22162464:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.845254 0.167728 0.674571 0.817218 0.280429 0.440603 0.0172295 0.105417 0.631546 0.71957 0.532537 0.924116 407 409 chr2 22968126 22968128 chr2:22968126-22968128:-:L1HS:NONREF 7 - L1HS KNR euL1db:mrip3592,1KGP:L1_umary_LINE1_267,Philippe:EXP_ID_0591 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HEK293 0.706452 0.819396 0.799308 0.835203 0.694534 0.00725953 0.932971 Beck_2010:23.0 Rodriguez-Martin_2020:1,Tubio_2014:2 408 410 chr2 22984153 22990168 chr2:22984153-22990168:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.454568 0.80021 0.788403 0.778257 0.6099 0.67562 0.0185759 0.78274 0.853151 0.823664 0.891058 0.892029 409 411 chr2 23171551 23177697 chr2:23171551-23177697:+:L1PA5:REF 11 + L1PA5 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.815965 0.354212 0.440758 0.0785877 0.152582 0.00986193 0.294677 0.20437 0.536709 0.645638 0.883142 410 412 chr2 23224851 23230886 chr2:23224851-23230886:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.200692 0.685131 0.677355 0.647499 0.544304 0.578856 0.0665874 0.619325 0.712468 0.646382 0.785946 0.729032 411 413 chr2 23736568 23742711 chr2:23736568-23742711:+:L1PA4:REF 12 + L1PA4 REF full-length ATAD2B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.847264 0.974185 0.982456 0.982132 0.969066 0.976804 0.838415 0.933213 0.976556 0.957746 0.969786 0.898239 412 414 chr2 24095157 24101258 chr2:24095157-24101258:+:L1PA6:REF 12 + L1PA6 REF full-length FAM228B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.804878 0.164773 0.894089 0.939638 0.900552 0.805851 0.694511 0.867704 0.97491 0.852535 0.959427 0.785714 413 415 chr2 24800323 24806471 chr2:24800323-24806471:-:L1PA4:REF 12 - L1PA4 REF full-length CENPO 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.92609 0.913842 0.981609 0.984252 0.935055 0.24435 0.907019 0.0186418 0.948551 0.987673 0.932619 0.865731 414 416 chr2 30904198 30910223 chr2:30904198-30910223:+:L1PA2:REF 12 + L1PA2 REF full-length GALNT14 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.554839 0.828198 0.871308 0.694476 0.910152 0.53406 0.044586 0.988406 0.902637 0.778816 0.903181 0.760479 415 417 chr2 31678098 31684166 chr2:31678098-31684166:-:L1PA6:REF 1 - L1PA6 REF full-length MRC5 0.0 416 418 chr2 32100467 32106586 chr2:32100467-32106586:-:L1PA5:REF 12 - L1PA5 REF full-length SPAST 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.903846 0.983607 0.869048 0.914894 0.932432 0.965517 0.921569 0.945455 0.987342 0.833333 0.957746 1.0 417 419 chr2 33170013 33176199 chr2:33170013-33176199:+:L1PA3:REF 12 + L1PA3 REF full-length LTBP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.827001 0.680623 0.921769 0.985115 0.964375 0.40499 0.629062 0.964472 0.966588 0.981197 0.969407 0.972039 418 420 chr2 34466216 34472650 chr2:34466216-34472650:+:L1PA7:REF 1 + L1PA7 REF full-length MRC5 0.0983607 419 421 chr2 34558063 34561457 chr2:34558063-34561457:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883721 0.13 0.29563 0.305147 0.0231214 0.117021 0.0120968 0.645669 0.596591 0.3125 0.147368 0.917526 420 422 chr2 35012447 35018591 chr2:35012447-35018591:+:L1PA4:REF 10 + L1PA4 REF full-length HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.316606 0.624851 0.330909 0.230769 0.0431034 0.582692 0.541371 0.596026 0.444444 0.925287 421 423 chr2 35106860 35113009 chr2:35106860-35113009:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.866906 0.330876 0.611111 0.73099 0.0910224 0.328872 0.0154525 0.0177419 0.747978 0.650386 0.5387 0.96988 422 424 chr2 35319757 35325900 chr2:35319757-35325900:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90027 0.454237 0.504274 0.52933 0.103343 0.316456 0.0107527 0.943262 0.714286 0.653846 0.404531 0.762712 423 425 chr2 35563061 35569205 chr2:35563061-35569205:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.806931 0.195266 0.226087 0.339286 0.008 0.0197368 0.0 0.515625 0.56422 0.477273 0.128713 0.617021 424 426 chr2 35654287 35654294 chr2:35654287-35654294:+:L1HS:NONREF 4 + L1HS KNR euL1db:mrip3627,1KGP:L1_umary_LINE1_286,Philippe:EXP_ID_0595 2102Ep,HepG2,HeLaS3,IMR90 0.292517 0.791176 0.744681 0.753351 425 427 chr2 36112506 36118537 chr2:36112506-36118537:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0728174 0.808712 0.766413 0.84306 0.623143 0.675639 0.0397456 0.830456 0.891639 0.838737 0.809597 0.945684 426 428 chr2 36343098 36343100 chr2:36343098-36343100:-:L1HS:NONREF 8 - L1HS KNR euL1db:mrip3633,1KGP:L1_umary_LINE1_288,Philippe:EXP_ID_0597 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293,H1 0.207218 0.969931 0.944417 0.971588 0.953082 0.96682 0.966344 0.925104 Beck_2010:13.0 Rodriguez-Martin_2020:13,Tubio_2014:5 427 429 chr2 37594197 37600327 chr2:37594197-37600327:-:L1PA6:REF 7 - L1PA6 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,HEK293 0.633333 0.374741 0.655532 0.935484 0.818182 0.717647 0.581818 428 430 chr2 37956656 37963165 chr2:37956656-37963165:-:L1PA7:REF 11 - L1PA7 REF full-length RMDN2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.860465 0.656863 0.710526 0.731092 0.675 0.533333 0.108696 0.666667 1.0 0.804878 0.742424 429 431 chr2 38132407 38138592 chr2:38132407-38138592:-:L1PA4:REF 12 - L1PA4 REF full-length CYP1B1-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910937 0.695901 0.807054 0.875608 0.849711 0.929619 0.0438095 0.920561 0.886957 0.962441 0.903346 0.964646 430 432 chr2 39575018 39581152 chr2:39575018-39581152:-:L1PA5:REF 12 - L1PA5 REF full-length MAP4K3-DT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929644 0.975626 0.955882 0.972207 0.872803 0.917722 0.518044 0.939633 0.981076 0.934186 0.92008 0.989407 431 433 chr2 40008598 40014619 chr2:40008598-40014619:-:L1PA2:REF 12 - L1PA2 REF full-length SLC8A1-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.539676 0.637373 0.79191 0.828826 0.801388 0.673624 0.0318302 0.758861 0.74392 0.800662 0.754294 0.824159 432 434 chr2 40232600 40238627 chr2:40232600-40238627:-:L1PA2:REF 12 - L1PA2 REF full-length SLC8A1-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.259866 0.771317 0.985427 0.981343 0.88936 0.679012 0.0156035 0.419414 0.94019 0.986031 0.949634 0.938053 433 435 chr2 40710866 40713411 chr2:40710866-40713411:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.927711 0.353741 0.916667 0.865044 0.813456 0.675214 0.0 0.770115 0.581498 0.936508 0.767025 0.944444 434 436 chr2 41686503 41686505 chr2:41686503-41686505:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip3645,1KGP:L1_umary_LINE1_295 MCF7,H1 0.949778 0.940701 435 437 chr2 41824275 41824277 chr2:41824275-41824277:+:L1HS:NONREF 2 + L1HS KNR euL1db:mrip3646,Philippe:EXP_ID_0599 HepG2,BJ 0.961569 0.81631 Beck_2010:0.0 436 438 chr2 43542869 43549021 chr2:43542869-43549021:-:L1PA3:REF 12 - L1PA3 REF full-length THADA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.940727 0.983262 0.986728 0.982167 0.978251 0.979239 0.973038 0.981455 0.97602 0.980249 0.979296 0.988506 437 439 chr2 43660471 43666500 chr2:43660471-43666500:-:L1PA2:REF 12 - L1PA2 REF full-length PLEKHH2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0499214 0.93062 0.883628 0.898938 0.626725 0.892253 0.791798 0.396684 0.980807 0.881316 0.897363 0.916117 438 440 chr2 45059559 45065587 chr2:45059559-45065587:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.312821 0.859375 0.674033 0.897436 0.884615 0.746377 0.175325 0.803922 0.857143 0.780269 0.849206 439 441 chr2 45075744 45081776 chr2:45075744-45081776:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.23491 0.906479 0.893032 0.906219 0.964867 0.832827 0.0592417 0.927273 0.969585 0.939394 0.963107 0.904429 440 442 chr2 46418469 46418952 chr2:46418469-46418952:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929115 0.891068 0.937029 0.96131 0.846488 0.970285 0.883204 0.98374 0.979093 0.963749 0.9373 0.972628 441 443 chr2 46472058 46478113 chr2:46472058-46478113:-:L1PA5:REF 1 - L1PA5 REF full-length TMEM247 MRC5 0.672566 442 444 chr2 48739839 48745890 chr2:48739839-48745890:+:L1PA3:REF 9 + L1PA3 REF full-length STON1-GTF2A1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HEK293 0.350575 0.627907 0.808081 0.877049 0.729412 0.735426 0.152882 0.809524 0.767442 443 445 chr2 51312721 51318845 chr2:51312721-51318845:-:L1PA4:REF 12 - L1PA4 REF full-length LOC730100 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919708 0.705171 0.66215 0.754808 0.279826 0.770089 0.00466744 0.432188 0.977124 0.876364 0.5053 0.923795 444 446 chr2 51391383 51397636 chr2:51391383-51397636:+:L1PA7:REF 12 + L1PA7 REF full-length LOC730100 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878049 0.0582524 0.416667 0.468254 0.0493827 0.309091 0.0238095 0.3 0.95 0.773585 0.26 0.96875 445 447 chr2 51769031 51775205 chr2:51769031-51775205:-:L1PA5:REF 4 - L1PA5 REF full-length LOC730100 HepG2,BJ,MRC5,HEK293 0.660714 0.583333 0.630037 0.625 446 448 chr2 52039405 52045552 chr2:52039405-52045552:-:L1PA3:REF 12 - L1PA3 REF full-length LOC730100 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.934145 0.631662 0.762111 0.80492 0.646341 0.830054 0.00605013 0.438017 0.951829 0.976035 0.639212 0.913174 447 449 chr2 52419719 52422901 chr2:52419719-52422901:+:L1P1:REF 10 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.916395 0.690625 0.701107 0.951705 0.36105 0.95283 0.00458015 0.977612 0.978659 0.75827 448 450 chr2 53587033 53593044 chr2:53587033-53593044:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.119492 0.827358 0.822208 0.874245 0.121023 0.935988 0.0233463 0.954344 0.977475 0.854839 0.136091 0.87673 449 451 chr2 55442106 55447873 chr2:55442106-55447873:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.829502 0.834699 0.894531 0.840319 0.935927 0.962547 0.857616 0.520492 0.961832 0.871951 0.947242 0.963542 450 452 chr2 55462161 55468310 chr2:55462161-55468310:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.735849 451 453 chr2 55736329 55742393 chr2:55736329-55742393:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.108137 0.89119 0.949394 0.905281 0.769024 0.959677 0.322745 0.862113 0.911765 0.951136 0.970131 0.931697 452 454 chr2 55788120 55794261 chr2:55788120-55794261:-:L1PA4:REF 11 - L1PA4 REF full-length 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.903198 0.908381 0.903178 0.90978 0.956395 0.0452128 0.0183221 0.953279 0.928705 0.950511 0.880645 453 455 chr2 55814032 55820140 chr2:55814032-55820140:+:L1PA4:REF 1 + L1PA4 REF full-length MRC5 0.971429 454 456 chr2 55831543 55837683 chr2:55831543-55837683:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.938776 1.0 0.987805 0.910798 0.90099 1.0 0.177419 0.977273 1.0 0.979167 0.945946 1.0 455 457 chr2 56551597 56557745 chr2:56551597-56557745:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.897459 0.204471 0.735895 0.626659 0.538312 0.0987654 0.0164986 0.923656 0.374784 0.684874 0.754314 0.878728 456 458 chr2 56603447 56606959 chr2:56603447-56606959:-:L1PA6:REF 2 - L1PA6 REF 3prime-truncated HepG2,MRC5 0.0576923 0.166667 457 459 chr2 57418710 57424719 chr2:57418710-57424719:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.287356 0.520833 0.595238 0.648876 0.34127 0.557895 0.0 0.125 0.962733 0.7 0.723684 458 460 chr2 57608847 57614848 chr2:57608847-57614848:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.800414 0.785494 0.798077 0.718079 0.537729 0.600992 0.00777512 0.845813 0.983843 0.753773 0.957431 459 461 chr2 58168158 58171615 chr2:58168158-58171615:+:L1P2:REF 12 + L1P2 REF 3prime-truncated FANCL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896422 0.97035 0.973118 0.902256 0.946625 0.981481 0.939024 0.97281 0.964844 0.968085 0.977099 0.971519 460 462 chr2 58171614 58177788 chr2:58171614-58177788:+:L1PA3:REF 12 + L1PA3 REF full-length FANCL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.803502 0.929797 0.953545 0.980624 0.96978 0.966184 0.716374 0.932961 0.938697 0.985437 0.95933 0.906091 461 463 chr2 58325341 58329409 chr2:58325341-58329409:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878156 0.437126 0.762675 0.785262 0.865385 0.7749 0.017758 0.548246 0.977984 0.783401 0.899894 0.963675 462 464 chr2 58381542 58387566 chr2:58381542-58387566:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.14767 0.876717 0.85999 0.90457 0.910642 0.919265 0.0583279 0.771883 0.98374 0.85752 0.894111 0.94023 463 465 chr2 60034873 60039411 chr2:60034873-60039411:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.848958 0.484848 0.581616 0.53681 0.636364 0.277778 0.0148515 0.684659 0.663212 0.58125 0.667254 0.910714 464 466 chr2 60083662 60089694 chr2:60083662-60089694:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.171176 0.83874 0.822599 0.82005 0.844427 0.708995 0.0130385 0.874428 0.903271 0.843902 0.92169 0.896118 465 467 chr2 60141191 60147223 chr2:60141191-60147223:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.40914 0.912048 0.870968 0.859147 0.915217 0.840456 0.033877 0.976945 0.906588 0.893035 0.958155 0.931868 466 468 chr2 60189023 60195053 chr2:60189023-60195053:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.892587 0.721436 0.759178 0.761684 0.684249 0.0985028 0.0193261 0.113363 0.904963 0.754831 0.878935 0.959964 467 469 chr2 60203200 60207771 chr2:60203200-60207771:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.825 0.0 0.32 0.27619 0.529412 0.0 0.0666667 0.65 0.0 0.541667 0.851064 0.733333 468 470 chr2 62580885 62586986 chr2:62580885-62586986:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.941538 0.979592 0.961924 0.757409 0.806897 0.646617 0.0184211 0.929448 0.974359 0.828986 0.830645 0.943396 469 471 chr2 62616418 62622729 chr2:62616418-62622729:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910959 0.954058 0.934211 0.746961 0.820037 0.773504 0.00729927 0.969349 0.991228 0.905028 0.902748 0.958904 470 472 chr2 62645710 62651726 chr2:62645710-62651726:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.726361 0.965874 0.702817 0.853912 0.652445 0.319629 0.0129353 0.839357 0.876984 0.646739 0.675937 0.852608 471 473 chr2 62835478 62841498 chr2:62835478-62841498:+:L1PA2:REF 12 + L1PA2 REF full-length EHBP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.30135 0.985697 0.987196 0.990404 0.981565 0.985634 0.979482 0.981646 0.982932 0.983993 0.984727 0.98 472 474 chr2 63210476 63216721 chr2:63210476-63216721:+:L1PA5:REF 12 + L1PA5 REF full-length WDPCP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.836645 0.457006 0.518438 0.358974 0.391144 0.827119 0.0395062 0.882883 0.915464 0.370968 0.585052 0.838235 473 475 chr2 63530723 63536624 chr2:63530723-63536624:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated WDPCP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.717949 0.616667 0.65 0.797909 0.641026 0.254237 0.137255 0.607843 0.780702 0.633333 0.666667 0.638889 474 476 chr2 63619721 63621877 chr2:63619721-63621877:+:L1PA7:REF 7 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,HCT116 0.3 0.541667 0.139344 0.857143 0.44 0.0 1.0 475 477 chr2 63706915 63708761 chr2:63706915-63708761:-:L1PA4:REF 3 - L1PA4 REF 3prime-truncated HepG2,MRC5,HCT116 0.871795 0.874317 0.911392 476 478 chr2 63926516 63932665 chr2:63926516-63932665:+:L1PA7:REF 1 + L1PA7 REF full-length VPS54 MRC5 0.333333 477 479 chr2 65924170 65930343 chr2:65924170-65930343:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889782 0.450029 0.758969 0.796534 0.93019 0.179104 0.296976 0.849926 0.823529 0.838636 0.969231 0.959716 478 480 chr2 66138949 66144939 chr2:66138949-66144939:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885382 0.351426 0.727536 0.699115 0.928158 0.403263 0.0152284 0.879473 0.540136 0.785714 0.93037 0.970874 479 481 chr2 66206329 66212369 chr2:66206329-66212369:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.936469 0.830901 0.822938 0.848624 0.93329 0.690217 0.0206264 0.755935 0.864652 0.888889 0.936519 0.953911 480 482 chr2 66391130 66397150 chr2:66391130-66397150:+:L1PA2:REF 12 + L1PA2 REF full-length LINC01873 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.169946 0.162097 0.841311 0.865237 0.0156886 0.17471 0.0213946 0.127363 0.827193 0.830623 0.924761 0.849845 481 483 chr2 66627088 66633235 chr2:66627088-66633235:-:L1PA3:REF 12 - L1PA3 REF full-length LINC01798 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.899548 0.753543 0.870284 0.962119 0.943897 0.686245 0.0820569 0.901919 0.714962 0.97026 0.949885 0.972093 482 484 chr2 66642648 66648743 chr2:66642648-66648743:-:L1PA4:REF 12 - L1PA4 REF full-length LINC01798 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.617247 0.147503 0.726008 0.719333 0.703851 0.261614 0.00813008 0.576402 0.198988 0.927273 0.654412 0.75 483 485 chr2 67356064 67362249 chr2:67356064-67362249:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.960526 0.669065 0.958904 0.952077 0.864198 1.0 0.842105 0.947917 0.964286 0.942529 0.960784 484 486 chr2 67654064 67656506 chr2:67654064-67656506:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902128 0.560976 0.95201 0.972083 0.925749 0.914821 0.0141044 0.942085 0.59752 0.970822 0.984242 0.942786 485 487 chr2 67738970 67745083 chr2:67738970-67745083:-:L1PA6:REF 1 - L1PA6 REF full-length MRC5 0.0 486 488 chr2 68404900 68411339 chr2:68404900-68411339:+:L1PA7:REF 12 + L1PA7 REF full-length PLEK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.797048 0.544218 0.477011 0.556291 0.688742 0.183486 0.117188 0.706897 0.766497 0.668539 0.813688 0.929032 487 489 chr2 68677861 68680074 chr2:68677861-68680074:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.153194 0.79602 0.760017 0.814103 0.837252 0.63749 0.103606 0.908462 0.854847 0.891361 0.941383 0.876461 488 490 chr2 68941762 68941764 chr2:68941762-68941764:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip3720,Philippe:EXP_ID_0608 GKN2 HeLaS3 0.907895 489 491 chr2 71245812 71251556 chr2:71245812-71251556:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.793478 0.14794 0.432039 0.452316 0.843612 0.127119 0.01 0.962825 0.916905 0.489933 0.922353 0.837989 490 492 chr2 71411474 71417501 chr2:71411474-71417501:-:L1HS:REF 12 - L1HS REF full-length ZNF638 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0279639 0.824617 0.761399 0.147232 0.00522696 0.383681 0.339134 0.0115327 0.985764 0.500648 0.00995025 0.07875 491 493 chr2 71978243 71978637 chr2:71978243-71978637:-:L1P2:REF 6 - L1P2 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,K562,HEK293 0.485 0.71875 0.703125 0.316667 0.016129 0.65625 492 494 chr2 72015949 72021960 chr2:72015949-72021960:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871667 0.822335 0.921171 0.838391 0.887686 0.864407 0.011976 0.932642 0.923836 0.772727 0.924565 0.871429 493 495 chr2 72063975 72069997 chr2:72063975-72069997:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.65337 0.881195 0.861902 0.83316 0.804496 0.893313 0.118241 0.561883 0.965165 0.825436 0.913428 0.955128 494 496 chr2 72297500 72300986 chr2:72297500-72300986:-:L1P2:REF 4 - L1P2 REF 3prime-truncated EXOC6B HepG2,MRC5,HEK293T,K562 0.866667 0.87794 0.490909 0.015873 495 497 chr2 72403730 72409869 chr2:72403730-72409869:+:L1PA4:REF 12 + L1PA4 REF full-length EXOC6B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.944444 0.976261 0.973615 0.981387 0.944046 0.943925 0.0785441 0.98081 0.971223 0.979592 0.94086 0.97479 496 498 chr2 73460454 73466651 chr2:73460454-73466651:+:L1PA4:REF 12 + L1PA4 REF full-length ALMS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.950877 0.982424 0.972603 0.980198 0.960591 0.966134 0.923005 0.970286 0.982079 0.982206 0.974131 0.968566 497 499 chr2 73480076 73486099 chr2:73480076-73486099:-:L1PA2:REF 12 - L1PA2 REF full-length ALMS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901033 0.950654 0.974425 0.98099 0.970886 0.895377 0.736278 0.934656 0.98227 0.929725 0.977119 0.907246 498 500 chr2 73645335 73648341 chr2:73645335-73648341:-:L1P1:REF 12 - L1P1 REF 3prime-truncated ALMS1P1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.727483 0.8398 0.866029 0.843523 0.858473 0.876574 0.0152439 0.842282 0.799564 0.777778 0.905858 0.857143 499 501 chr2 73721395 73727535 chr2:73721395-73727535:+:L1PA3:REF 12 + L1PA3 REF full-length TPRKB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.845758 0.851301 0.922201 0.926108 0.904403 0.932127 0.431579 0.965092 0.969748 0.910569 0.956589 0.941176 500 502 chr2 76090648 76096785 chr2:76090648-76096785:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.787594 0.38548 0.435937 0.46875 0.289833 0.850746 0.530786 0.32684 0.634294 0.586207 0.464912 0.930612 501 503 chr2 76137225 76140186 chr2:76137225-76140186:-:L1PA7:REF 5 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,K562 0.875 0.560748 0.462963 0.554585 0.655172 502 504 chr2 76345152 76351328 chr2:76345152-76351328:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.760456 0.302498 0.570433 0.464522 0.244474 0.878393 0.0177966 0.694641 0.461282 0.543353 0.333865 0.828571 503 505 chr2 76647991 76654020 chr2:76647991-76654020:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.771228 0.416884 0.545759 0.56153 0.503844 0.432044 0.00890869 0.652278 0.709918 0.558912 0.445418 0.706278 504 506 chr2 76702092 76708115 chr2:76702092-76708115:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910998 0.560408 0.69695 0.746698 0.67407 0.719343 0.0201342 0.837948 0.879845 0.761628 0.701493 0.956616 505 507 chr2 76722834 76729033 chr2:76722834-76729033:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91751 0.379293 0.640094 0.662078 0.523124 0.425026 0.00484027 0.690522 0.78105 0.615922 0.519159 0.811617 506 508 chr2 76775758 76781758 chr2:76775758-76781758:-:L1PA2:REF 12 - L1PA2 REF full-length LRRTM4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.251977 0.768794 0.809672 0.824988 0.835923 0.823594 0.0103872 0.887372 0.920755 0.885542 0.813749 0.739418 507 509 chr2 76795804 76801677 chr2:76795804-76801677:+:L1PA2:REF 12 + L1PA2 REF full-length LRRTM4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.808732 0.841549 0.75 0.821966 0.747596 0.711111 0.0178117 0.722078 0.832924 0.863014 0.780488 0.821429 508 510 chr2 77592831 77598845 chr2:77592831-77598845:+:L1PA3:REF 10 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.308663 0.879697 0.771723 0.845825 0.0202054 0.82016 0.0201135 0.816818 0.847107 0.863031 509 511 chr2 77753772 77759778 chr2:77753772-77759778:+:L1PA2:REF 12 + L1PA2 REF full-length LOC101927967 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.037203 0.942011 0.769349 0.289742 0.00885536 0.695817 0.019975 0.768505 0.927529 0.792648 0.894737 0.128843 510 512 chr2 79105693 79111696 chr2:79105693-79111696:-:L1PA3:REF 10 - L1PA3 REF full-length REG1A 2102Ep,HepG2,BJ,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.246465 0.757093 0.737619 0.577801 0.672445 0.246425 0.886518 0.741866 0.696731 0.932806 511 513 chr2 79282256 79288271 chr2:79282256-79288271:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.876331 0.588049 0.71798 0.566029 0.509554 0.52234 0.0183318 0.522107 0.76808 0.642807 0.884451 512 514 chr2 79465914 79470114 chr2:79465914-79470114:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.858667 0.140177 0.386318 0.417495 0.0285714 0.0909091 0.0128535 0.0339506 0.495183 0.40339 0.10148 0.862857 513 515 chr2 79702261 79702263 chr2:79702261-79702263:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip3751,1KGP:L1_umary_LINE1_343,Philippe:EXP_ID_0612 CTNNA2 IMR90 0.941463 Beck_2010:0.0 514 516 chr2 80093001 80099154 chr2:80093001-80099154:-:L1PA4:REF 12 - L1PA4 REF full-length CTNNA2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921969 0.527927 0.920635 0.934653 0.601496 0.311203 0.574648 0.529197 0.859536 0.939655 0.72795 0.953488 515 517 chr2 81870918 81870920 chr2:81870918-81870920:+:L1HS:NONREF 9 + L1HS KNR euL1db:mrip3763,1KGP:L1_umary_LINE1_346,Philippe:EXP_ID_0615 HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.854706 0.841143 0.582742 0.859734 0.0119048 0.832857 0.977296 0.756853 0.953061 516 518 chr2 83088804 83094831 chr2:83088804-83094831:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.136364 0.804057 0.884058 0.963361 0.493886 0.832476 0.0718336 0.877248 0.980029 0.940503 0.952381 0.863937 517 519 chr2 83347474 83353489 chr2:83347474-83353489:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910304 0.770411 0.713121 0.508701 0.701082 0.0125392 0.705592 0.984516 0.7897 0.750325 0.969027 518 520 chr2 83768302 83774332 chr2:83768302-83774332:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.825464 0.765452 0.829163 0.833472 0.53719 0.784762 0.636975 0.485963 0.984669 0.838483 0.853719 0.979355 519 521 chr2 84103801 84104490 chr2:84103801-84104490:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.809677 0.623306 0.7743 0.751391 0.452542 0.10567 0.058011 0.305233 0.0427892 0.816129 0.644182 0.851266 520 522 chr2 84224738 84230910 chr2:84224738-84230910:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.917402 0.752552 0.713942 0.683638 0.305615 0.439196 0.0184443 0.89578 0.97856 0.740541 0.915726 0.962687 521 523 chr2 85963806 85969950 chr2:85963806-85969950:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.894737 0.492188 0.881607 0.882133 0.688766 0.174107 0.646259 0.665635 0.233393 0.856031 0.887755 0.90458 522 524 chr2 86655238 86661268 chr2:86655238-86661268:-:L1HS:REF 12 - L1HS REF full-length RNF103-CHMP3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.924812 0.967672 0.893541 0.897368 0.815668 0.953757 0.541259 0.968852 0.97407 0.888889 0.949283 0.974922 Brouha_2003:0.0 523 525 chr2 86663685 86669846 chr2:86663685-86669846:+:L1PA6:REF 1 + L1PA6 REF full-length RNF103-CHMP3 MRC5 0.0178571 524 526 chr2 88107541 88108083 chr2:88107541-88108083:-:L1P1:REF 12 - L1P1 REF 3prime-truncated SMYD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901338 0.806978 0.796262 0.79287 0.932253 0.789474 0.470499 0.952141 0.972686 0.811594 0.960199 0.930314 525 527 chr2 90350348 90356484 chr2:90350348-90356484:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.497275 0.419619 0.479702 0.454054 0.37622 0.331409 0.0105581 0.510393 0.457476 0.47093 0.489496 0.536901 526 528 chr2 91446947 91453083 chr2:91446947-91453083:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.825532 0.604018 0.670803 0.666432 0.48298 0.554922 0.030086 0.62766 0.638494 0.650589 0.706259 0.790006 527 529 chr2 91921173 91927204 chr2:91921173-91927204:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.386938 0.425344 0.560778 0.635108 0.22156 0.378641 0.011811 0.192182 0.716848 0.602064 0.596131 0.800602 528 530 chr2 95092743 95098852 chr2:95092743-95098852:+:L1PA6:REF 1 + L1PA6 REF full-length MRPS5 MRC5 0.4 529 531 chr2 95252086 95258210 chr2:95252086-95258210:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91974 0.207383 0.691244 0.650391 0.513761 0.339901 0.00808081 0.857143 0.887097 0.65798 0.869732 0.860714 530 532 chr2 95869529 95875690 chr2:95869529-95875690:+:L1PA3:REF 11 + L1PA3 REF full-length ANKRD36C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.86 0.827451 0.993289 0.772595 0.888235 0.96124 0.822222 0.8 0.903226 1.0 0.911111 531 533 chr2 96378981 96385131 chr2:96378981-96385131:+:L1PA3:REF 12 + L1PA3 REF full-length NCAPH 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.884921 0.87908 0.936404 0.969141 0.874737 0.965812 0.819469 0.974886 0.982812 0.970109 0.928222 0.97 532 534 chr2 97225627 97231779 chr2:97225627-97231779:-:L1PA3:REF 12 - L1PA3 REF full-length ANKRD36 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918699 0.966912 0.982143 0.974359 0.973684 0.954545 0.927083 0.967949 0.958333 1.0 0.954545 0.902778 533 535 chr2 97525420 97531566 chr2:97525420-97531566:+:L1PA3:REF 8 + L1PA3 REF full-length ANKRD36B HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293 0.978261 1.0 0.973214 0.985714 0.929577 1.0 1.0 0.907407 534 536 chr2 98977835 98984013 chr2:98977835-98984013:+:L1PA4:REF 11 + L1PA4 REF full-length 2102Ep,HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.858561 0.421951 0.715284 0.439801 0.607595 0.00542741 0.871505 0.954312 0.724046 0.816873 0.908774 535 537 chr2 99000538 99002862 chr2:99000538-99002862:+:L1P1:REF 4 + L1P1 REF 3prime-truncated TSGA10 BJ,MRC5,HEK293T,K562 0.744186 0.748538 0.821429 0.0 536 538 chr2 101935381 101940619 chr2:101935381-101940619:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873853 0.521669 0.671329 0.827536 0.814741 0.168776 0.0111732 0.951311 0.896825 0.724359 0.901376 0.958333 537 539 chr2 102295989 102295991 chr2:102295989-102295991:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip3821,1KGP:L1_umary_LINE1_366 K562 0.358342 538 540 chr2 102324371 102330501 chr2:102324371-102330501:+:L1PA4:REF 12 + L1PA4 REF full-length IL1RL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.789916 0.484058 0.709184 0.790466 0.571042 0.453752 0.427379 0.880399 0.830239 0.904908 0.724505 0.884097 539 541 chr2 102566355 102572385 chr2:102566355-102572385:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.17112 0.802132 0.844072 0.87931 0.84433 0.7853 0.0805569 0.976214 0.970825 0.869313 0.9399 0.950425 Brouha_2003:0.9 540 542 chr2 102874020 102880174 chr2:102874020-102880174:-:L1PA3:REF 12 - L1PA3 REF full-length LINC01796 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.904762 0.594636 0.720109 0.750175 0.828447 0.544204 0.0922619 0.938897 0.942424 0.789757 0.917827 0.942177 541 543 chr2 104607338 104610704 chr2:104607338-104610704:+:L1P2:REF 11 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.740741 0.189655 0.32 0.233766 0.763158 0.0416667 0.0 0.3125 0.24 0.727273 1.0 542 544 chr2 104953606 104959755 chr2:104953606-104959755:-:L1PA6:REF 2 - L1PA6 REF full-length LOC102724691 HepG2,MRC5 0.025641 0.17284 543 545 chr2 105211969 105214490 chr2:105211969-105214490:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.927619 0.83663 0.869252 0.880319 0.91552 0.851957 0.194099 0.579444 0.966667 0.845936 0.962225 0.981503 544 546 chr2 106130892 106136925 chr2:106130892-106136925:+:L1PA2:REF 12 + L1PA2 REF full-length UXS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.209581 0.988636 0.80826 0.958574 0.0563258 0.825545 0.827251 0.935354 0.98295 0.9 0.959869 0.529412 545 547 chr2 108458274 108458276 chr2:108458274-108458276:-:L1HS:NONREF 1 - L1HS KNR Philippe:EXP_ID_0633 GCC2 HCT116 0.982942 546 548 chr2 108643201 108646694 chr2:108643201-108646694:+:L1PA7:REF 9 + L1PA7 REF 3prime-truncated LIMS1 2102Ep,HepG2,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.894231 0.891892 0.884615 0.964706 0.86 0.96 0.869565 0.78 0.975 547 549 chr2 109111631 109117785 chr2:109111631-109117785:-:L1PA3:REF 11 - L1PA3 REF full-length SH3RF3-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.947044 0.835938 0.915767 0.936364 0.801993 0.0675944 0.95122 0.919903 0.892377 0.857143 0.952569 548 550 chr2 109952956 109959093 chr2:109952956-109959093:+:L1PA6:REF 11 + L1PA6 REF full-length LIMS3-LOC440895 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885714 0.735632 0.811111 0.779817 0.903704 0.0 0.928571 0.984615 0.633333 0.925234 1.0 549 551 chr2 110250921 110257059 chr2:110250921-110257059:+:L1PA6:REF 10 + L1PA6 REF full-length LOC100507334 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.858209 0.651786 0.67619 0.545455 0.732558 0.906667 0.77381 0.647727 0.684932 0.833333 550 552 chr2 110274188 110274519 chr2:110274188-110274519:-:L1P3:REF 12 - L1P3 REF 3prime-truncated LOC100507334 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.842105 0.0816327 0.714286 0.71831 0.791667 0.172414 0.0 0.73913 0.698113 0.571429 0.901961 0.96 551 553 chr2 110412395 110418532 chr2:110412395-110418532:-:L1PA6:REF 11 - L1PA6 REF full-length LOC100288570 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906103 0.873362 0.934524 0.835681 0.873016 0.0348837 0.957983 0.946809 0.714286 0.926829 0.957265 552 554 chr2 110697181 110697512 chr2:110697181-110697512:+:L1P3:REF 11 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.931034 0.223404 0.626667 0.696133 0.877778 0.880952 0.888889 0.933333 0.673913 0.932692 0.952381 553 555 chr2 112503812 112509845 chr2:112503812-112509845:-:L1HS:REF 12 - L1HS REF full-length TTL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.398727 0.983788 0.969839 0.980789 0.949273 0.945191 0.609817 0.877063 0.98093 0.966268 0.980751 0.959508 554 556 chr2 113471481 113477545 chr2:113471481-113477545:-:L1PA3:REF 12 - L1PA3 REF full-length CBWD2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.371827 0.98072 0.990262 0.939189 0.907379 0.982275 0.944569 0.98265 0.984233 0.892665 0.905397 0.845679 555 557 chr2 113656151 113657874 chr2:113656151-113657874:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.178774 0.0048951 0.815228 0.948199 0.00994126 0.644848 0.0311135 0.00801165 0.964411 0.935052 0.922099 0.491039 556 558 chr2 114012951 114019126 chr2:114012951-114019126:-:L1PA3:REF 11 - L1PA3 REF full-length LINC01191 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.979167 0.787313 0.816176 0.918072 0.314721 0.156627 0.0210526 0.867133 0.831169 0.927711 0.858974 557 559 chr2 114096298 114102405 chr2:114096298-114102405:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871429 0.538462 0.525424 0.608833 0.103044 0.152 0.012987 0.6 0.762215 0.637363 0.463203 0.855769 558 560 chr2 114408865 114414136 chr2:114408865-114414136:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated MRC5 0.00515464 559 561 chr2 115004354 115007143 chr2:115004354-115007143:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated DPP10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.820546 0.729045 0.724638 0.758065 0.374036 0.318237 0.0142602 0.651649 0.710775 0.761711 0.647898 0.869403 560 562 chr2 115376550 115382573 chr2:115376550-115382573:-:L1PA3:REF 12 - L1PA3 REF full-length DPP10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.899594 0.807626 0.73821 0.796521 0.647506 0.705618 0.0565445 0.547344 0.842045 0.787645 0.68915 0.971739 561 563 chr2 115799431 115805573 chr2:115799431-115805573:-:L1PA4:REF 12 - L1PA4 REF full-length DPP10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.882166 0.803977 0.744949 0.795011 0.432277 0.596899 0.0106007 0.498403 0.819444 0.728 0.70229 0.972222 562 564 chr2 115889046 115895541 chr2:115889046-115895541:-:L1PA7:REF 10 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.8 0.13913 0.566667 0.342222 0.0 0.266667 0.274194 0.448276 0.390625 0.653846 563 565 chr2 116048941 116054967 chr2:116048941-116054967:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.152965 0.713035 0.823029 0.75041 0.654709 0.78839 0.0180668 0.779793 0.938931 0.873292 0.837458 0.900545 564 566 chr2 117001151 117007277 chr2:117001151-117007277:+:L1PA6:REF 11 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.807692 0.333333 0.148148 0.330357 0.0147059 0.0 0.0 0.0 0.0 0.28125 0.310811 565 567 chr2 117156034 117162051 chr2:117156034-117162051:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.373019 0.603025 0.72809 0.706309 0.323328 0.504019 0.0172865 0.336333 0.704672 0.775 0.775058 0.957557 566 568 chr2 117525395 117530328 chr2:117525395-117530328:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.225321 0.843981 0.766454 0.698577 0.756229 0.71096 0.017644 0.82534 0.830484 0.743199 0.86982 0.878276 567 569 chr2 117579236 117582415 chr2:117579236-117582415:+:L1P2:REF 11 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.907173 0.66092 0.643617 0.701564 0.661644 0.699531 0.0283688 0.887387 0.740566 0.754993 0.951872 568 570 chr2 117649184 117655215 chr2:117649184-117655215:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.226027 0.572973 0.456386 0.633948 0.490334 0.522642 0.0148831 0.488825 0.650694 0.58663 0.693474 0.691089 569 571 chr2 117778178 117784316 chr2:117778178-117784316:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889515 0.767882 0.925926 0.765139 0.787519 0.772043 0.104321 0.78956 0.950736 0.915233 0.870482 0.97836 570 572 chr2 117803780 117809809 chr2:117803780-117809809:+:L1PA3:REF 12 + L1PA3 REF full-length DDX18 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0690345 0.0113599 0.688134 0.21118 0.381051 0.833032 0.0261333 0.00956938 0.941208 0.410817 0.656881 0.136306 571 573 chr2 118137000 118143020 chr2:118137000-118143020:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.102914 0.0444712 0.84003 0.792553 0.0176991 0.004329 0.0148233 0.688172 0.00784314 0.821782 0.649261 0.845926 572 574 chr2 118895761 118901792 chr2:118895761-118901792:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.623306 0.827912 0.80763 0.816295 0.671378 0.0487078 0.973568 0.858447 0.816384 0.863041 0.958217 573 575 chr2 119001633 119004483 chr2:119001633-119004483:-:L1P1:REF 12 - L1P1 REF 3prime-truncated MARCO 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.772222 0.281075 0.435714 0.365714 0.0677507 0.012987 0.0243161 0.906122 0.57967 0.502793 0.75 0.849673 574 576 chr2 119618288 119620942 chr2:119618288-119620942:+:L1PA7:REF 8 + L1PA7 REF 3prime-truncated CFAP221 2102Ep,HepG2,MRC5,HEK293T,HCT116,IMR90,HEK293,H1 0.818182 0.0 0.297872 0.5 0.72 0.166667 0.470588 0.8 575 577 chr2 122012673 122018708 chr2:122012673-122018708:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.474606 0.923077 0.894872 0.770819 0.884941 0.6 0.0774125 0.941176 0.893424 0.905537 0.972081 0.861818 576 578 chr2 122046204 122052249 chr2:122046204-122052249:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.633257 0.822586 0.835066 0.784821 0.75 0.702194 0.0422675 0.00269107 0.859035 0.857498 0.934654 0.956844 577 579 chr2 122348937 122352314 chr2:122348937-122352314:-:L1PA2:REF 8 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HEK293 0.216049 0.536585 0.622222 0.553616 0.025641 0.0373832 0.0186916 0.211111 578 580 chr2 122550744 122556816 chr2:122550744-122556816:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898866 0.243473 0.732075 0.712442 0.297297 0.306329 0.0190597 0.572034 0.692153 0.76 0.712259 0.972851 579 581 chr2 123628724 123634742 chr2:123628724-123634742:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.439541 0.620339 0.709434 0.765255 0.379675 0.587413 0.0121581 0.564036 0.756654 0.720884 0.556785 0.822967 580 582 chr2 124122949 124129073 chr2:124122949-124129073:+:L1PA5:REF 8 + L1PA5 REF full-length CNTNAP5 HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293 0.359756 0.6875 0.232456 0.347222 0.0 0.294118 0.352941 0.535211 581 583 chr2 124139775 124145807 chr2:124139775-124145807:+:L1PA2:REF 12 + L1PA2 REF full-length CNTNAP5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.441628 0.7692 0.822612 0.806158 0.606186 0.601004 0.0179487 0.748489 0.891342 0.886105 0.767321 0.934152 582 584 chr2 124356306 124362334 chr2:124356306-124362334:-:L1PA2:REF 12 - L1PA2 REF full-length CNTNAP5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.558696 0.823014 0.827085 0.814355 0.555336 0.749231 0.0191281 0.695747 0.898198 0.857247 0.825535 0.960375 583 585 chr2 124407870 124413893 chr2:124407870-124413893:+:L1PA2:REF 12 + L1PA2 REF full-length CNTNAP5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.227549 0.91123 0.854912 0.810596 0.587675 0.654367 0.0303266 0.77095 0.868893 0.849711 0.787205 0.932127 584 586 chr2 124593139 124599168 chr2:124593139-124599168:-:L1PA2:REF 12 - L1PA2 REF full-length CNTNAP5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.208461 0.899062 0.823026 0.858533 0.604686 0.767374 0.0373832 0.818798 0.869064 0.88724 0.753078 0.963678 585 587 chr2 126178048 126184064 chr2:126178048-126184064:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.457576 0.605263 0.718631 0.79361 0.640845 0.709677 0.148936 0.685864 0.841121 0.807882 0.808036 0.862595 586 588 chr2 126195613 126199204 chr2:126195613-126199204:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.853261 0.382151 0.46875 0.62039 0.311787 0.0740741 0.0416667 0.29697 0.318898 0.630631 0.675676 0.931034 587 589 chr2 128816413 128816415 chr2:128816413-128816415:+:L1HS:NONREF 4 + L1HS KNR euL1db:mrip3905,1KGP:L1_umary_LINE1_398,Philippe:EXP_ID_0645 2102Ep,HepG2,BJ,MRC5 0.660428 0.903543 0.86165 0.881768 Beck_2010:0.0 588 590 chr2 128858984 128865016 chr2:128858984-128865016:-:L1PA2:REF 12 - L1PA2 REF full-length LOC101927881 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.141261 0.780382 0.871707 0.860167 0.795207 0.688787 0.016129 0.91507 0.904082 0.812981 0.938043 0.894572 589 591 chr2 129415687 129417400 chr2:129415687-129417400:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0691048 0.778348 0.783959 0.77983 0.637064 0.630654 0.108487 0.935682 0.795423 0.812746 0.85083 0.928789 590 592 chr2 129531920 129537968 chr2:129531920-129537968:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863501 0.659091 0.662222 0.666667 0.492958 0.394286 0.0234604 0.96633 0.716346 0.769231 0.630058 0.916667 591 593 chr2 129685897 129687022 chr2:129685897-129687022:-:L1HS:REF 11 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.272471 0.188949 0.430028 0.717809 0.167808 0.0140783 0.0252918 0.921023 0.286853 0.42616 0.286719 592 594 chr2 129998470 130000000 chr2:129998470-130000000:+:L1P1:REF 11 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.823615 0.513816 0.640665 0.543646 0.731278 0.0210804 0.96142 0.892655 0.711246 0.825666 0.927954 593 595 chr2 131341481 131347665 chr2:131341481-131347665:-:L1PA4:REF 2 - L1PA4 REF full-length 2102Ep,MRC5 0.670213 0.616438 594 596 chr2 131818809 131819312 chr2:131818809-131819312:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.760671 0.455952 0.545455 0.656173 0.615274 0.415094 0.0118906 0.830247 0.970588 0.623913 0.813609 0.72093 595 597 chr2 132062875 132069016 chr2:132062875-132069016:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.785047 0.363436 0.606884 0.681948 0.384615 0.308017 0.0143149 0.618243 0.89834 0.693333 0.590308 0.890052 596 598 chr2 132231325 132237282 chr2:132231325-132237282:+:L1PA3:REF 12 + L1PA3 REF full-length ANKRD30BL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.557895 0.472843 0.703947 0.730892 0.84669 0.533333 0.0243902 0.8 0.884259 0.775281 0.8 0.825581 597 599 chr2 132363793 132364061 chr2:132363793-132364061:+:L1PA8:REF 12 + L1PA8 REF 3prime-truncated FAM201B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.370588 0.0120482 0.215686 0.115942 0.0609756 0.0150376 0.0105263 0.292683 0.316667 0.198473 0.329609 0.517241 598 600 chr2 132457507 132458261 chr2:132457507-132458261:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated GPR39 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.88535 0.0892857 0.472603 0.69697 0.0382514 0.5625 0.0 0.926829 0.939597 0.463415 0.429577 0.87069 599 601 chr2 133465007 133471038 chr2:133465007-133471038:-:L1PA2:REF 12 - L1PA2 REF full-length NCKAP5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.650206 0.859021 0.911884 0.969365 0.950477 0.967677 0.0880881 0.976645 0.975841 0.965863 0.965833 0.950791 600 602 chr2 133546865 133552758 chr2:133546865-133552758:+:L1PA2:REF 12 + L1PA2 REF full-length NCKAP5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0940171 0.853677 0.899174 0.893508 0.85061 0.905263 0.0370968 0.948649 0.579892 0.976879 0.872798 0.83682 601 603 chr2 133910480 133916504 chr2:133910480-133916504:+:L1PA2:REF 10 + L1PA2 REF full-length 2102Ep,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.120565 0.792272 0.864962 0.716955 0.0183758 0.923506 0.964194 0.8975 0.894975 0.914375 602 604 chr2 134650547 134656574 chr2:134650547-134656574:-:L1PA2:REF 5 - L1PA2 REF full-length TMEM163 2102Ep,BJ,MRC5,HEK293T,K562 0.075969 0.801047 0.868243 0.0454545 0.100733 603 605 chr2 134746514 134752631 chr2:134746514-134752631:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.793478 0.0225989 0.419643 0.333333 0.46875 0.0434783 0.040404 0.473684 0.953704 0.396825 0.867257 0.824561 604 606 chr2 134825451 134831458 chr2:134825451-134831458:+:L1PA2:REF 12 + L1PA2 REF full-length ACMSD 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.52246 0.871402 0.824803 0.794399 0.922185 0.519308 0.0123278 0.978405 0.980221 0.855991 0.956843 0.937198 605 607 chr2 135231810 135237948 chr2:135231810-135237948:+:L1PA4:REF 12 + L1PA4 REF full-length ZRANB3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.940447 0.962853 0.95501 0.955729 0.949367 0.97093 0.719064 0.886207 0.97449 0.952096 0.955145 0.989418 606 608 chr2 135291597 135297711 chr2:135291597-135297711:-:L1PA4:REF 12 - L1PA4 REF full-length ZRANB3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.932494 0.981392 0.984904 0.980424 0.899876 0.986421 0.964334 0.975508 0.987355 0.924125 0.915767 0.980085 607 609 chr2 135402975 135404882 chr2:135402975-135404882:+:L1P1:REF 3 + L1P1 REF 3prime-truncated ZRANB3 HEK293T,IMR90,HEK293 0.97446 0.954887 0.978261 608 610 chr2 135515298 135518720 chr2:135515298-135518720:-:L1P3:REF 12 - L1P3 REF 3prime-truncated ZRANB3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.867769 0.960748 0.960317 0.97351 0.751553 0.967949 0.948805 0.983333 0.974763 0.81982 0.758621 0.923077 609 611 chr2 136264052 136267203 chr2:136264052-136267203:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.829787 0.0102041 0.209677 0.221374 0.150943 0.814815 0.0 0.736842 0.705882 0.25 0.438596 0.793103 610 612 chr2 136596065 136602178 chr2:136596065-136602178:+:L1PA5:REF 11 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.884477 0.119007 0.383628 0.468567 0.215139 0.0106007 0.331754 0.344512 0.403785 0.288754 0.784672 611 613 chr2 136940864 136947121 chr2:136940864-136947121:-:L1PA6:REF 12 - L1PA6 REF full-length THSD7B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.843537 0.103943 0.510638 0.478188 0.0782123 0.147368 0.0 0.915789 0.52027 0.436975 0.5375 0.936709 612 614 chr2 137070564 137076737 chr2:137070564-137076737:-:L1PA4:REF 1 - L1PA4 REF full-length THSD7B MRC5 0.731707 613 615 chr2 137309506 137315534 chr2:137309506-137315534:-:L1PA3:REF 9 - L1PA3 REF full-length THSD7B 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,IMR90,HEK293,H1 0.848249 0.708092 0.787037 0.824343 0.568841 0.879032 0.759494 0.77533 0.954545 614 616 chr2 137393160 137399190 chr2:137393160-137399190:-:L1PA2:REF 11 - L1PA2 REF full-length THSD7B 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.525 0.740845 0.840336 0.774194 0.617801 0.12931 0.966387 0.808511 0.757143 0.892308 0.850649 615 617 chr2 137582343 137588434 chr2:137582343-137588434:-:L1PA5:REF 2 - L1PA5 REF full-length THSD7B MRC5,HEK293 0.318182 0.363636 616 618 chr2 138069171 138071693 chr2:138069171-138071693:-:L1P2:REF 3 - L1P2 REF 3prime-truncated MRC5,IMR90,HEK293 0.860294 0.888889 0.666667 617 619 chr2 138795654 138802086 chr2:138795654-138802086:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.950617 0.236025 0.422535 0.428571 0.346939 0.04 0.0 0.861111 0.91954 0.520833 0.784314 0.974359 618 620 chr2 138939402 138943113 chr2:138939402-138943113:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.833333 0.0181818 0.25 0.0686275 0.25 0.0625 0.0 0.757576 0.9375 0.0454545 0.757576 1.0 619 621 chr2 139532787 139538975 chr2:139532787-139538975:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.758454 0.377193 0.692958 0.635747 0.882667 0.34717 0.0471014 0.771481 0.964286 0.767123 0.779762 0.965157 620 622 chr2 142607781 142613812 chr2:142607781-142613812:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.317708 0.214911 0.839977 0.959744 0.914439 0.937824 0.0100143 0.970409 0.971991 0.849279 0.93923 0.900433 621 623 chr2 142806275 142812293 chr2:142806275-142812293:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.393718 0.977227 0.902664 0.966489 0.826177 0.224172 0.0760719 0.985739 0.974963 0.951864 0.948927 622 624 chr2 143006042 143012076 chr2:143006042-143012076:+:L1PA2:REF 12 + L1PA2 REF full-length KYNU 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.550874 0.979609 0.810629 0.9617 0.95962 0.982659 0.0781861 0.97502 0.976328 0.933219 0.961861 0.979266 623 625 chr2 143253223 143253225 chr2:143253223-143253225:+:L1HS:NONREF 5 + L1HS KNR euL1db:mrip3984,1KGP:L1_umary_LINE1_410,Philippe:EXP_ID_0660 ARHGAP15 BJ,HEK293T,HeLaS3,MCF7,IMR90 0.863743 0.962264 0.813839 0.931818 0.917874 Gardner_2017:1,Rodriguez-Martin_2020:14 624 626 chr2 143536378 143542524 chr2:143536378-143542524:-:L1PA4:REF 12 - L1PA4 REF full-length ARHGAP15 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.793157 0.635362 0.946606 0.891318 0.865513 0.694992 0.239252 0.616949 0.922502 0.825088 0.869565 0.831731 625 627 chr2 143661562 143667611 chr2:143661562-143667611:+:L1PA2:REF 12 + L1PA2 REF full-length ARHGAP15 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87337 0.402969 0.886516 0.925 0.908794 0.751845 0.313941 0.875553 0.977023 0.926543 0.916742 0.96 626 628 chr2 143860956 143866987 chr2:143860956-143866987:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.214908 0.838639 0.957895 0.975102 0.957459 0.870796 0.671587 0.936108 0.98272 0.97609 0.975037 0.958841 Philippe_2016:1 627 629 chr2 144104121 144108357 chr2:144104121-144108357:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated GTDC1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.934066 0.540284 0.940959 0.963077 0.913514 0.76 0.784861 0.971074 0.968051 0.938931 0.983287 0.958042 628 630 chr2 144897598 144903603 chr2:144897598-144903603:-:L1PA2:REF 11 - L1PA2 REF full-length TEX41 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.0884211 0.799452 0.964393 0.973631 0.954156 0.920368 0.886466 0.987258 0.95283 0.969679 0.884371 629 631 chr2 146405741 146411341 chr2:146405741-146411341:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.645361 0.806043 0.871192 0.93153 0.00925926 0.757825 0.0219409 0.364564 0.95136 0.938023 0.777027 0.928177 630 632 chr2 147150792 147156955 chr2:147150792-147156955:+:L1PA4:REF 2 + L1PA4 REF full-length HepG2,MRC5 0.541667 0.779762 631 633 chr2 147580469 147586902 chr2:147580469-147586902:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.834983 0.0535714 0.66343 0.562784 0.780255 0.0518519 0.00374532 0.828704 0.934641 0.724359 0.767442 0.947712 632 634 chr2 147727004 147733028 chr2:147727004-147733028:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.147574 0.786667 0.847071 0.830211 0.827947 0.69544 0.0188802 0.893827 0.936183 0.816167 0.866374 0.859322 633 635 chr2 148148940 148154956 chr2:148148940-148154956:-:L1PA2:REF 12 - L1PA2 REF full-length MBD5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.839666 0.854007 0.915997 0.867811 0.849765 0.949919 0.216334 0.390359 0.816019 0.929368 0.85443 0.858469 634 636 chr2 148188745 148194773 chr2:148188745-148194773:+:L1HS:REF 12 + L1HS REF full-length MBD5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.154625 0.857339 0.912767 0.878898 0.845027 0.899261 0.719428 0.900732 0.877768 0.914866 0.836877 0.872087 Gardner_2017:1 635 637 chr2 148322844 148328854 chr2:148322844-148328854:-:L1PA3:REF 12 - L1PA3 REF full-length MBD5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918083 0.944014 0.977848 0.980174 0.954098 0.982993 0.029661 0.91945 0.976357 0.99235 0.954965 0.974952 636 638 chr2 149501242 149507406 chr2:149501242-149507406:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.489872 0.490995 0.877999 0.863072 0.899768 0.755597 0.0355221 0.666667 0.967383 0.903431 0.958305 0.935484 637 639 chr2 149637880 149643991 chr2:149637880-149643991:-:L1PA4:REF 12 - L1PA4 REF full-length LOC101929231 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.884615 0.950652 0.959391 0.957496 0.793574 0.257525 0.00640342 0.913323 0.929341 0.972452 0.901639 0.946215 638 640 chr2 149850457 149856466 chr2:149850457-149856466:+:L1PA2:REF 12 + L1PA2 REF full-length LINC01931 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911526 0.792202 0.948254 0.978853 0.895142 0.82545 0.00785083 0.969612 0.882775 0.964492 0.926969 0.906785 639 641 chr2 149945265 149951292 chr2:149945265-149951292:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.169409 0.811335 0.956787 0.976037 0.775781 0.899431 0.015562 0.97327 0.938093 0.924344 0.891056 0.966647 640 642 chr2 149965733 149971865 chr2:149965733-149971865:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.947619 0.841085 0.928882 0.95758 0.619565 0.87291 0.0275 0.964835 0.97931 0.984127 0.948148 0.983923 641 643 chr2 151698868 151704889 chr2:151698868-151704889:-:L1PA2:REF 11 - L1PA2 REF full-length NEB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.243968 0.909556 0.866667 0.914324 0.970199 0.864516 0.118598 0.942308 0.961652 0.945355 0.958549 642 644 chr2 153007766 153013796 chr2:153007766-153013796:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.198618 0.773751 0.602262 0.604174 0.511592 0.753425 0.0297582 0.781179 0.71847 0.716667 0.592989 0.917832 643 645 chr2 153251473 153257477 chr2:153251473-153257477:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.236948 0.681034 0.621258 0.789644 0.386601 0.804552 0.0123537 0.959199 0.963351 0.569353 0.758769 0.940476 644 646 chr2 153397921 153403952 chr2:153397921-153403952:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.122673 0.70051 0.70162 0.59791 0.643399 0.512104 0.0190616 0.736908 0.526854 0.675197 0.954589 0.519504 645 647 chr2 153433831 153439958 chr2:153433831-153439958:-:L1PA4:REF 1 - L1PA4 REF full-length HEK293T 0.425926 646 648 chr2 153719447 153725466 chr2:153719447-153725466:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.121611 0.507003 0.818849 0.795292 0.521557 0.851562 0.0175316 0.90396 0.975069 0.808576 0.761296 0.876972 647 649 chr2 154147919 154154081 chr2:154147919-154154081:-:L1PA3:REF 12 - L1PA3 REF full-length GALNT13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.829287 0.566667 0.635302 0.603687 0.721612 0.87483 0.00928998 0.548954 0.979054 0.676849 0.78214 0.946824 648 650 chr2 155345507 155351990 chr2:155345507-155351990:-:L1PA8:REF 12 - L1PA8 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.706522 0.0503597 0.0721154 0.0169014 0.360465 0.0384615 0.079096 0.561538 0.888235 0.027027 0.129213 0.729323 649 651 chr2 155466628 155472644 chr2:155466628-155472644:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863316 0.681462 0.70255 0.722595 0.476577 0.810627 0.423966 0.640138 0.968869 0.736422 0.674419 0.943888 650 652 chr2 155671335 155671341 chr2:155671335-155671341:+:L1HS:NONREF 5 + L1HS KNR euL1db:mrip4030,1KGP:L1_umary_LINE1_426,Philippe:EXP_ID_0666 2102Ep,HEK293T,HCT116,HEK293,H1 0.0552326 0.848022 0.986823 0.913325 0.933333 Brouha_2002:1,Gardner_2017:41,MacFarlane_2013:7,Philippe_2016:1,Rodriguez-Martin_2020:116,Tubio_2014:21 651 653 chr2 155763399 155767519 chr2:155763399-155767519:-:L1P3:REF 1 - L1P3 REF 3prime-truncated MRC5 0.243697 652 654 chr2 155879907 155885578 chr2:155879907-155885578:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.803571 0.0546875 0.24 0.189573 0.446429 0.266667 0.0 0.333333 0.640625 0.194444 0.0793651 0.809524 653 655 chr2 155965887 155971915 chr2:155965887-155971915:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0850561 0.899541 0.753119 0.7685 0.0118679 0.927641 0.0131579 0.666402 0.979079 0.761957 0.939185 0.893431 654 656 chr2 156254518 156260532 chr2:156254518-156260532:+:L1PA2:REF 12 + L1PA2 REF full-length LINC01876 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0606061 0.51593 0.675105 0.819465 0.0166028 0.935103 0.09 0.992347 0.0163728 0.764085 0.273684 0.372807 655 657 chr2 156775796 156776575 chr2:156775796-156776575:-:L1PA3:REF 11 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.961856 0.519014 0.815758 0.927105 0.953793 0.808 0.434468 0.968434 0.91858 0.977757 0.977778 656 658 chr2 156962342 156968483 chr2:156962342-156968483:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878626 0.800362 0.85061 0.949118 0.70884 0.958115 0.188166 0.957282 0.97622 0.937428 0.885772 0.966916 657 659 chr2 157368535 157374566 chr2:157368535-157374566:+:L1PA2:REF 12 + L1PA2 REF full-length FAM133DP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.276267 0.743053 0.799347 0.828042 0.728596 0.638112 0.0169312 0.901116 0.970662 0.800657 0.875796 0.933726 658 660 chr2 157397599 157403696 chr2:157397599-157403696:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.847793 0.241722 0.587847 0.537151 0.285061 0.0299401 0.0133333 0.426829 0.958791 0.562334 0.811688 0.962145 659 661 chr2 157515143 157521173 chr2:157515143-157521173:+:L1PA2:REF 12 + L1PA2 REF full-length ACVR1C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0823117 0.905372 0.83531 0.85287 0.644459 0.725968 0.0547604 0.879741 0.981009 0.868035 0.954827 0.845669 660 662 chr2 157566353 157572377 chr2:157566353-157572377:+:L1HS:REF 12 + L1HS REF full-length ACVR1C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.141176 0.814511 0.793333 0.866047 0.808539 0.754237 0.0162086 0.939394 0.983389 0.801852 0.910037 0.904412 661 663 chr2 158351231 158357242 chr2:158351231-158357242:+:L1PA2:REF 12 + L1PA2 REF full-length CCDC148 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.101843 0.890776 0.914304 0.906169 0.877477 0.698779 0.397885 0.877295 0.969466 0.9375 0.974946 0.896605 662 664 chr2 158522617 158528649 chr2:158522617-158528649:+:L1PA2:REF 12 + L1PA2 REF full-length PKP4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.596719 0.933283 0.949948 0.937987 0.973827 0.975751 0.946536 0.943339 0.985397 0.942482 0.98178 0.97125 663 665 chr2 159821745 159828118 chr2:159821745-159828118:+:L1PA7:REF 7 + L1PA7 REF full-length LY75-CD302 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116 0.5 0.137255 0.571429 0.6 0.807692 0.0333333 0.818182 664 666 chr2 160114516 160120680 chr2:160114516-160120680:+:L1HS:REF 7 + L1HS REF full-length ITGB6 2102Ep,HepG2,MRC5,HEK293T,K562,HCT116,HEK293 0.946565 0.373444 0.904878 0.570423 0.0 0.921986 0.863636 665 667 chr2 160756918 160763090 chr2:160756918-160763090:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.926316 0.694205 0.944598 0.945154 0.803042 0.128378 0.00816327 0.962825 0.962583 0.883311 0.920949 0.97829 666 668 chr2 160766499 160772615 chr2:160766499-160772615:+:L1PA4:REF 10 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293,H1 0.892231 0.741189 0.849162 0.97113 0.6678 0.00858369 0.973913 0.927729 0.948187 0.980198 667 669 chr2 160797332 160803466 chr2:160797332-160803466:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.945205 0.860904 0.879781 0.975913 0.908532 0.965152 0.0109536 0.977372 0.932266 0.955684 0.969131 0.95315 668 670 chr2 160850732 160856748 chr2:160850732-160856748:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.168453 0.830837 0.937135 0.904209 0.869262 0.836425 0.0212474 0.902778 0.942822 0.949153 0.897882 0.878563 669 671 chr2 161002169 161003669 chr2:161002169-161003669:+:L1P1:REF 7 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.761006 0.865801 0.861386 0.899598 0.839286 0.89781 0.838509 670 672 chr2 161457298 161462858 chr2:161457298-161462858:-:L1P3:REF 1 - L1P3 REF 3prime-truncated MRC5 0.610526 671 673 chr2 161892394 161892396 chr2:161892394-161892396:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip4047,Philippe:EXP_ID_0668 SLC4A10 K562 0.0331361 672 674 chr2 163432002 163432004 chr2:163432002-163432004:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip4053,1KGP:L1_umary_LINE1_439,Philippe:EXP_ID_0670 MRC5 0.750159 673 675 chr2 163497385 163500000 chr2:163497385-163500000:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918919 0.517915 0.609626 0.878049 0.927083 0.818182 0.015873 0.99 0.982759 0.622642 0.97093 0.926829 674 676 chr2 164261247 164267132 chr2:164261247-164267132:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890014 0.253648 0.508234 0.778409 0.702749 0.720994 0.0269151 0.826115 0.971306 0.613357 0.718853 0.862745 675 677 chr2 165485934 165491963 chr2:165485934-165491963:+:L1PA2:REF 11 + L1PA2 REF full-length CSRNP3 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.359676 0.819436 0.889469 0.922407 0.95444 0.0170394 0.769616 0.890661 0.854031 0.969973 0.974478 676 678 chr2 165731663 165737694 chr2:165731663-165737694:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.280702 0.873554 0.920068 0.973158 0.951407 0.667546 0.018711 0.945882 0.952846 0.977041 0.960967 0.962733 677 679 chr2 165971495 165977930 chr2:165971495-165977930:+:L1PA8:REF 8 + L1PA8 REF full-length LOC102724058 HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293 0.320611 0.651685 0.436548 0.676923 0.00980392 0.805556 0.666667 0.708333 678 680 chr2 166685835 166691939 chr2:166685835-166691939:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.746667 0.502222 0.503876 0.632075 0.133929 0.479167 0.0240964 0.4 0.587302 0.770833 0.520325 0.641026 679 681 chr2 166702725 166708745 chr2:166702725-166708745:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.940419 0.534211 0.906601 0.403243 0.380435 0.0042735 0.672794 0.82899 0.936034 0.746584 0.947608 680 682 chr2 166853711 166859875 chr2:166853711-166859875:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896454 0.411667 0.587581 0.893511 0.33134 0.356923 0.0242261 0.405537 0.557598 0.9 0.656985 0.947137 681 683 chr2 166939709 166941592 chr2:166939709-166941592:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated XIRP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.819749 0.281398 0.192488 0.917874 0.0777643 0.0487805 0.00410397 0.0350195 0.126781 0.929114 0.489884 0.947781 682 684 chr2 166988454 166994509 chr2:166988454-166994509:+:L1HS:REF 11 + L1HS REF full-length XIRP2 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.488584 0.768298 0.8125 0.960374 0.53 0.0171858 0.849624 0.868363 0.93319 0.806084 0.724928 683 685 chr2 167081946 167087967 chr2:167081946-167087967:-:L1PA2:REF 12 - L1PA2 REF full-length XIRP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.94514 0.833154 0.7989 0.94412 0.515098 0.756899 0.0152672 0.697909 0.844444 0.953393 0.795549 0.945396 684 686 chr2 167662955 167668974 chr2:167662955-167668974:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.936368 0.861048 0.868282 0.936904 0.529758 0.765389 0.0172414 0.78125 0.939631 0.932603 0.933056 0.974323 685 687 chr2 167804326 167810426 chr2:167804326-167810426:-:L1PA4:REF 12 - L1PA4 REF full-length LOC105616981 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.787611 0.966325 0.403893 0.62069 0.21256 0.0564972 0.546275 0.287671 0.360294 0.732394 0.881459 0.912409 686 688 chr2 167835042 167841189 chr2:167835042-167841189:+:L1PA3:REF 12 + L1PA3 REF full-length LOC105616981 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.930684 0.982235 0.77513 0.91192 0.475548 0.444169 0.911593 0.93401 0.916342 0.878628 0.959204 0.978858 687 689 chr2 169248623 169254656 chr2:169248623-169254656:+:L1HS:REF 12 + L1HS REF full-length LRP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.115108 0.821844 0.763547 0.844858 0.929678 0.815937 0.360054 0.874401 0.977034 0.780239 0.969521 0.849866 688 690 chr2 169452781 169458934 chr2:169452781-169458934:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.776224 0.730947 0.787149 0.8837 0.903974 0.855422 0.716012 0.335025 0.818731 0.894231 0.875587 0.973799 689 691 chr2 170125609 170132418 chr2:170125609-170132418:+:L1PA7:REF 1 + L1PA7 REF full-length MRC5 0.364706 690 692 chr2 171641285 171647419 chr2:171641285-171647419:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872123 0.583512 0.80344 0.788764 0.841141 0.756839 0.0968153 0.894502 0.954155 0.835979 0.856639 0.946615 691 693 chr2 172187264 172193414 chr2:172187264-172193414:-:L1PA3:REF 9 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.880952 0.662983 0.794643 0.871324 0.60119 0.816092 0.923077 0.827586 0.616279 692 694 chr2 172315270 172321297 chr2:172315270-172321297:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.220068 0.922283 0.955446 0.919881 0.888052 0.861878 0.0165899 0.96112 0.969388 0.975309 0.959064 0.946429 Gardner_2017:1 693 695 chr2 173527289 173533317 chr2:173527289-173533317:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.112954 0.798856 0.890984 0.893957 0.0592417 0.335832 0.0860746 0.0215703 0.0274983 0.893431 0.961851 0.866873 694 696 chr2 173699375 173705410 chr2:173699375-173705410:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.16684 0.857237 0.908249 0.941354 0.977383 0.914093 0.224362 0.975133 0.980822 0.926049 0.968638 0.949183 695 697 chr2 174404458 174410482 chr2:174404458-174410482:-:L1PA2:REF 12 - L1PA2 REF full-length SCRN3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.104265 0.987377 0.902174 0.673862 0.013308 0.487671 0.869152 0.978123 0.982253 0.880983 0.0207805 0.417671 696 698 chr2 175481951 175487994 chr2:175481951-175487994:-:L1HS:REF 10 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.134189 0.804842 0.818636 0.848649 0.879941 0.756032 0.677419 0.974806 0.856604 0.944898 Brouha_2003:0.0 697 699 chr2 175588546 175594563 chr2:175588546-175594563:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.0725 0.307531 0.898551 0.787786 0.0 0.894309 0.0805085 0.956522 0.97973 0.77551 0.935233 698 700 chr2 175668021 175671166 chr2:175668021-175671166:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated MRC5 0.174603 699 701 chr2 175703157 175704878 chr2:175703157-175704878:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.401066 0.933884 0.862819 0.848606 0.968831 0.751451 0.0976465 0.672269 0.975405 0.858491 0.961369 0.964158 700 702 chr2 175759595 175765629 chr2:175759595-175765629:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.787206 0.621151 0.554167 0.749488 0.699895 0.391941 0.026506 0.676991 0.694263 0.563588 0.698795 0.583748 701 703 chr2 175912136 175914757 chr2:175912136-175914757:-:L1P3:REF 12 - L1P3 REF 3prime-truncated LNPK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.914286 0.943327 0.949275 0.931818 0.962536 0.626984 0.333333 0.94 0.973485 0.882353 0.97153 0.936937 702 704 chr2 176305923 176312032 chr2:176305923-176312032:-:L1PA6:REF 10 - L1PA6 REF full-length MTX2 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.942529 0.985 0.991525 0.983936 0.979167 0.976608 0.968354 0.98995 0.95283 0.962567 703 705 chr2 176796422 176802427 chr2:176796422-176802427:+:L1PA3:REF 4 + L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T 0.675439 0.35503 0.672464 0.958763 704 706 chr2 177785395 177791549 chr2:177785395-177791549:+:L1PA3:REF 8 + L1PA3 REF full-length PDE11A 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,HEK293 0.928571 0.8107 0.909091 0.775281 0.934066 0.1 0.983051 0.92233 705 707 chr2 177973073 177979090 chr2:177973073-177979090:+:L1HS:REF 12 + L1HS REF full-length PDE11A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0785714 0.967407 0.847387 0.92142 0.938831 0.8 0.113556 0.94391 0.980036 0.85159 0.961392 0.695724 706 708 chr2 178049371 178055510 chr2:178049371-178055510:+:L1PA5:REF 11 + L1PA5 REF full-length PDE11A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.9 0.7 0.564626 0.671053 0.883333 0.118644 0.0416667 0.897727 0.941748 0.590909 0.941667 707 709 chr2 178352113 178358247 chr2:178352113-178358247:+:L1PA6:REF 1 + L1PA6 REF full-length OSBPL6 MRC5 0.00458716 708 710 chr2 178982451 178988482 chr2:178982451-178988482:+:L1PA3:REF 12 + L1PA3 REF full-length CCDC141 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.614042 0.718771 0.76871 0.823165 0.879581 0.735267 0.0195995 0.832307 0.966817 0.75918 0.927553 0.944393 709 711 chr2 179061184 179067325 chr2:179061184-179067325:-:L1PA3:REF 2 - L1PA3 REF full-length 2102Ep,H1 0.902098 0.927083 710 712 chr2 179087387 179093560 chr2:179087387-179093560:-:L1PA4:REF 12 - L1PA4 REF full-length SESTD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921674 0.508607 0.719355 0.811104 0.700099 0.734597 0.0102623 0.834725 0.970334 0.850129 0.778882 0.93578 711 713 chr2 179195944 179201918 chr2:179195944-179201918:+:L1PA3:REF 12 + L1PA3 REF full-length SESTD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868704 0.980319 0.934659 0.93235 0.958184 0.974795 0.0141791 0.916877 0.928898 0.936855 0.973898 0.92508 712 714 chr2 179212023 179218140 chr2:179212023-179218140:+:L1PA6:REF 1 + L1PA6 REF full-length SESTD1 K562 0.0 713 715 chr2 180765101 180769322 chr2:180765101-180769322:+:L1P2:REF 1 + L1P2 REF 3prime-truncated SCHLAP1 MRC5 0.0393701 714 716 chr2 180833661 180839689 chr2:180833661-180839689:-:L1HS:REF 12 - L1HS REF full-length SCHLAP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.105772 0.760902 0.944858 0.977503 0.959508 0.932603 0.0314506 0.952734 0.975453 0.952924 0.975834 0.812894 715 717 chr2 181731649 181737829 chr2:181731649-181737829:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.847222 0.590028 0.784431 0.72426 0.789916 0.928571 0.02 0.985612 0.967742 0.829114 0.817972 0.884956 716 718 chr2 182025225 182031239 chr2:182025225-182031239:-:L1PA2:REF 12 - L1PA2 REF full-length PPP1R1C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.100665 0.83982 0.878767 0.948226 0.932577 0.973721 0.062599 0.956432 0.982709 0.948579 0.951314 0.576606 717 719 chr2 182212404 182218434 chr2:182212404-182218434:+:L1PA3:REF 12 + L1PA3 REF full-length PDE1A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.932487 0.885381 0.940212 0.966985 0.948292 0.898862 0.0703125 0.970514 0.966395 0.963504 0.97188 0.967866 718 720 chr2 183448314 183454476 chr2:183448314-183454476:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.848435 0.401734 0.506475 0.551667 0.276402 0.116438 0.0138539 0.716024 0.971193 0.601286 0.764873 0.917582 719 721 chr2 183586195 183592337 chr2:183586195-183592337:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.894321 0.533205 0.664585 0.679746 0.413003 0.514393 0.0151663 0.876847 0.979715 0.75842 0.728999 0.978417 720 722 chr2 183841545 183844205 chr2:183841545-183844205:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated MRC5 0.276316 721 723 chr2 185419434 185425462 chr2:185419434-185425462:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0457291 0.809954 0.736367 0.459695 0.429632 0.940242 0.0208558 0.855893 0.92161 0.717656 0.892755 0.0929432 722 724 chr2 185585887 185591908 chr2:185585887-185591908:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.137864 0.418097 0.705998 0.787293 0.520516 0.781155 0.0383663 0.825321 0.959276 0.675676 0.643836 0.937685 723 725 chr2 185841720 185847756 chr2:185841720-185847756:-:L1PA2:REF 12 - L1PA2 REF full-length FSIP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.747619 0.790625 0.718407 0.748391 0.806373 0.914894 0.156398 0.779006 0.779126 0.658228 0.648038 0.851282 724 726 chr2 185864597 185870656 chr2:185864597-185870656:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.110299 0.872677 0.793317 0.857364 0.00506543 0.882751 0.00634249 0.841484 0.903105 0.889391 0.794279 0.857538 725 727 chr2 186792716 186799099 chr2:186792716-186799099:+:L1PA7:REF 1 + L1PA7 REF full-length MRC5 0.244444 726 728 chr2 186811774 186817171 chr2:186811774-186817171:+:L1PA7:REF 3 + L1PA7 REF 3prime-truncated MRC5,IMR90,HEK293 0.784431 0.787234 0.777778 727 729 chr2 188123561 188129537 chr2:188123561-188129537:+:L1PA3:REF 12 + L1PA3 REF full-length LINC01090 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.157929 0.0479103 0.550111 0.465517 0.120975 0.805195 0.0203837 0.300481 0.0720486 0.51634 0.890909 0.224751 728 730 chr2 189351806 189358184 chr2:189351806-189358184:-:L1PA7:REF 1 - L1PA7 REF full-length MRC5 0.859155 729 731 chr2 189891522 189893682 chr2:189891522-189893682:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.936061 0.614967 0.89693 0.943327 0.935282 0.785714 0.363636 0.941176 0.969639 0.945338 0.969231 0.968912 730 732 chr2 190613973 190613975 chr2:190613973-190613975:-:L1HS:NONREF 3 - L1HS KNR euL1db:mrip4147,1KGP:L1_umary_LINE1_477,Philippe:EXP_ID_0686 HEK293T,IMR90,HEK293 0.894665 0.883142 0.907285 Beck_2010:57.0 Rodriguez-Martin_2020:15 731 733 chr2 190772250 190778401 chr2:190772250-190778401:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.924119 0.954521 0.891946 0.931346 0.860187 0.967791 0.648107 0.95807 0.969867 0.899281 0.925587 0.95 732 734 chr2 191160584 191164944 chr2:191160584-191164944:+:L1P2:REF 12 + L1P2 REF 3prime-truncated STAT4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.93154 0.378468 0.954296 0.906534 0.889279 0.727273 0.00666667 0.814917 0.882255 0.92 0.904459 0.935897 733 735 chr2 191761849 191767876 chr2:191761849-191767876:+:L1PA2:REF 10 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293,H1 0.400261 0.816558 0.868217 0.889458 0.89387 0.875 0.882237 0.911915 0.908163 0.862903 734 736 chr2 192268435 192274450 chr2:192268435-192274450:-:L1PA2:REF 6 - L1PA2 REF full-length HepG2,MRC5,HEK293T,MCF7,HCT116,HEK293 0.780488 0.948276 0.890909 0.897351 0.977778 0.901554 735 737 chr2 193170704 193171720 chr2:193170704-193171720:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0499376 0.919277 0.841294 0.87878 0.662162 0.977716 0.046274 0.978716 0.981837 0.831903 0.904587 0.0600189 736 738 chr2 193212420 193218448 chr2:193212420-193218448:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.125767 0.859485 0.837527 0.856105 0.929493 0.927586 0.0814053 0.941486 0.980938 0.842155 0.891414 0.952602 737 739 chr2 193704913 193710934 chr2:193704913-193710934:-:L1PA3:REF 6 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116 0.716667 0.590909 0.583333 0.648318 0.611111 0.985714 738 740 chr2 193903874 193905536 chr2:193903874-193905536:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.356522 0.284698 0.358491 0.439623 0.387947 0.410072 0.0140351 0.405063 0.46888 0.427835 0.403509 0.452096 739 741 chr2 194854737 194855258 chr2:194854737-194855258:+:L1P1:REF 6 + L1P1 REF 3prime-truncated HepG2,BJ,MRC5,K562,IMR90,HEK293 0.0102041 0.358696 0.274576 0.0 0.384615 0.4375 740 742 chr2 195067521 195073543 chr2:195067521-195073543:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.180085 0.716805 0.742459 0.769834 0.817676 0.825065 0.0148233 0.785888 0.980085 0.698006 0.673713 0.875912 741 743 chr2 195228435 195234459 chr2:195228435-195234459:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.276995 0.667582 0.737609 0.795302 0.765625 0.743682 0.12766 0.740741 0.903465 0.719101 0.775 742 744 chr2 195373191 195379241 chr2:195373191-195379241:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.197057 0.810088 0.868627 0.894158 0.876515 0.900518 0.854334 0.898489 0.973522 0.926431 0.880297 0.895374 743 745 chr2 195523002 195529095 chr2:195523002-195529095:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.749141 0.499049 0.94086 0.98031 0.813453 0.947727 0.895735 0.560265 0.978231 0.899767 0.922542 0.953804 744 746 chr2 195743883 195749992 chr2:195743883-195749992:+:L1PA3:REF 12 + L1PA3 REF full-length DNAH7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.924757 0.88191 0.974087 0.986851 0.961123 0.983092 0.957576 0.613014 0.992933 0.991979 0.969402 0.964953 745 747 chr2 196521488 196527500 chr2:196521488-196527500:-:L1PA2:REF 12 - L1PA2 REF full-length HECW2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.106109 0.76974 0.927488 0.927437 0.868843 0.97992 0.107075 0.0182106 0.971501 0.918987 0.936873 0.874332 746 748 chr2 196905587 196911636 chr2:196905587-196911636:+:L1HS:REF 12 + L1HS REF full-length PGAP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.111212 0.973634 0.9412 0.970832 0.0596259 0.969903 0.487947 0.914332 0.973739 0.919473 0.130973 0.456604 Brouha_2003:0.0 747 749 chr2 197634735 197640761 chr2:197634735-197640761:-:L1PA2:REF 12 - L1PA2 REF full-length RFTN2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0570437 0.913483 0.934726 0.97772 0.0199889 0.911411 0.561011 0.911548 0.941568 0.969845 0.973629 0.975527 748 750 chr2 197687546 197693561 chr2:197687546-197693561:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.103614 0.853659 0.862115 0.94186 0.0408889 0.0 0.431907 0.943987 0.963374 0.941948 0.929282 0.888337 749 751 chr2 198017928 198024409 chr2:198017928-198024409:+:L1PA7:REF 10 + L1PA7 REF full-length PLCL1 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.885057 0.0224215 0.431818 0.378319 0.601351 0.475 0.115854 0.6 0.42963 0.886364 750 752 chr2 198196260 198202415 chr2:198196260-198202415:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890244 0.183649 0.778846 0.805348 0.912313 0.5 0.229102 0.661765 0.850575 0.691099 0.93 0.921811 751 753 chr2 198684460 198690891 chr2:198684460-198690891:+:L1PA7:REF 3 + L1PA7 REF full-length HepG2,MRC5,HEK293 0.0338983 0.48 0.8 752 754 chr2 198915189 198915191 chr2:198915189-198915191:+:L1HS:NONREF 3 + L1HS KNR euL1db:mrip4173,1KGP:L1_umary_LINE1_489,Philippe:EXP_ID_0690 BJ,MCF7,HCT116 0.894389 0.487805 0.978528 753 755 chr2 199028485 199034598 chr2:199028485-199034598:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.882535 0.590541 0.75656 0.670507 0.891334 0.56044 0.0148368 0.787097 0.926544 0.733945 0.850299 0.947005 754 756 chr2 199239608 199245731 chr2:199239608-199245731:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.916667 0.235484 0.726667 0.566494 0.704301 0.108333 0.0 0.730337 0.943503 0.823009 0.768844 1.0 755 757 chr2 200561046 200567211 chr2:200561046-200567211:-:L1PA5:REF 12 - L1PA5 REF full-length SGO2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87814 0.971787 0.990557 0.983871 0.933735 0.976699 0.913043 0.968531 0.987391 0.988055 0.964218 0.962834 756 758 chr2 201290544 201296670 chr2:201290544-201296670:+:L1PA4:REF 12 + L1PA4 REF full-length FLACC1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.847791 0.977813 0.887892 0.90249 0.872582 0.864078 0.827869 0.945227 0.858117 0.946619 0.9233 0.889881 757 759 chr2 201299945 201306098 chr2:201299945-201306098:+:L1PA5:REF 1 + L1PA5 REF full-length FLACC1 MRC5 0.0 758 760 chr2 204991072 204997106 chr2:204991072-204997106:-:L1PA2:REF 12 - L1PA2 REF full-length PARD3B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.145965 0.873164 0.968373 0.982323 0.963952 0.794207 0.154305 0.964286 0.933594 0.975369 0.979353 0.9421 759 761 chr2 206894207 206900352 chr2:206894207-206900352:-:L1PA7:REF 11 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.894231 0.144144 0.657895 0.54321 0.581081 0.0625 0.769231 0.985294 0.729167 0.739583 0.895833 760 762 chr2 206908035 206914052 chr2:206908035-206914052:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.773879 0.699714 0.796296 0.766317 0.844746 0.474729 0.00815217 0.614802 0.976144 0.807542 0.928389 0.940452 761 763 chr2 207000910 207006934 chr2:207000910-207006934:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919532 0.873199 0.904936 0.924121 0.923513 0.0304472 0.721116 0.887589 0.926897 0.96224 0.97542 762 764 chr2 207344165 207350576 chr2:207344165-207350576:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.947644 0.525826 0.919811 0.969667 0.94 0.880952 0.856557 0.938017 0.962818 0.985577 0.947867 0.932489 763 765 chr2 208800640 208806791 chr2:208800640-208806791:+:L1PA3:REF 12 + L1PA3 REF full-length LOC101927960 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.6 0.794955 0.631884 0.67375 0.423803 0.388829 0.904215 0.932191 0.976134 0.707345 0.644121 0.932724 764 766 chr2 208811621 208817648 chr2:208811621-208817648:+:L1PA2:REF 12 + L1PA2 REF full-length LOC101927960 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.154002 0.335124 0.4133 0.40842 0.123136 0.138462 0.644068 0.426829 0.855515 0.535599 0.566417 0.818993 765 767 chr2 208831567 208837733 chr2:208831567-208837733:+:L1PA4:REF 11 + L1PA4 REF full-length LOC101927960 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.924761 0.676032 0.733423 0.70111 0.442953 0.809731 0.933718 0.931653 0.694262 0.606509 0.945466 766 768 chr2 209128529 209134554 chr2:209128529-209134554:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.762278 0.367976 0.61019 0.587302 0.233979 0.0127065 0.686508 0.914651 0.610729 0.588881 0.927611 767 769 chr2 209746180 209752208 chr2:209746180-209752208:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.366756 0.80847 0.857608 0.888365 0.76916 0.764249 0.0185185 0.845574 0.97574 0.859539 0.94301 0.939678 768 770 chr2 211219320 211225344 chr2:211219320-211225344:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.765791 0.584983 0.596215 0.669602 0.745604 0.962103 0.0193798 0.977011 0.981754 0.62422 0.90119 0.949074 769 771 chr2 211810973 211813182 chr2:211810973-211813182:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated ERBB4 MRC5 0.131313 770 772 chr2 211888536 211894571 chr2:211888536-211894571:+:L1PA2:REF 5 + L1PA2 REF full-length ERBB4 2102Ep,HepG2,BJ,MRC5,K562 0.0338428 0.758242 0.80137 0.895604 0.0308008 771 773 chr2 212785128 212791268 chr2:212785128-212791268:+:L1PA4:REF 11 + L1PA4 REF full-length LINC01878 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.892045 0.301587 0.672515 0.804769 0.474419 0.654676 0.899522 0.939815 0.854054 0.652632 0.95625 772 774 chr2 213353899 213359904 chr2:213353899-213359904:-:L1PA6:REF 12 - L1PA6 REF full-length SPAG16 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.824742 0.842742 0.722222 0.665012 0.455556 0.269231 0.0 0.888889 0.971014 0.666667 0.642424 0.947368 773 775 chr2 213567231 213573262 chr2:213567231-213573262:-:L1HS:REF 8 - L1HS REF full-length SPAG16 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,IMR90,HEK293 0.229066 0.742268 0.701835 0.878947 0.465839 0.02443 0.802083 0.775641 774 776 chr2 214683796 214689805 chr2:214683796-214689805:+:L1PA2:REF 10 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.0214715 0.0116861 0.094492 0.327648 0.593387 0.0136327 0.910502 0.161662 0.0171478 0.1067 775 777 chr2 215220243 215226331 chr2:215220243-215226331:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.864238 0.866828 0.881743 0.896205 0.85874 0.849162 0.741519 0.886057 0.949153 0.866667 0.894292 0.886686 776 778 chr2 215988102 215994568 chr2:215988102-215994568:+:L1PA7:REF 2 + L1PA7 REF full-length MREG HepG2,HCT116 0.97351 0.986301 777 779 chr2 216454715 216460842 chr2:216454715-216460842:+:L1PA5:REF 12 + L1PA5 REF full-length SMARCAL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.938713 0.980782 0.979882 0.986622 0.983789 0.960613 0.990323 0.98786 0.982178 0.99633 0.969121 0.973404 778 780 chr2 216977758 216983154 chr2:216977758-216983154:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated MRC5 0.341772 779 781 chr2 218102605 218108683 chr2:218102605-218108683:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.967742 0.237245 0.828125 0.880407 0.708108 0.4375 0.00578035 0.973684 0.965174 0.913043 0.964912 0.985507 780 782 chr2 218771971 218773383 chr2:218771971-218773383:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated CYP27A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.89748 0.978166 0.942987 0.936652 0.928503 0.911043 0.0192308 0.96582 0.977581 0.966009 0.952156 0.954545 781 783 chr2 219931818 219937838 chr2:219931818-219937838:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.223599 0.902638 0.784111 0.92769 0.84255 0.790179 0.00893471 0.824757 0.862687 0.67561 0.961538 0.897214 782 784 chr2 220382217 220388343 chr2:220382217-220388343:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.840637 0.0383877 0.868132 0.863372 0.563636 0.451613 0.01 0.795 0.872054 0.829268 0.717131 0.913043 783 785 chr2 220413500 220413502 chr2:220413500-220413502:-:L1HS:NONREF 3 - L1HS KNR euL1db:mrip4243 HEK293T,HEK293,H1 0.765464 0.770395 0.83081 784 786 chr2 221984562 221990586 chr2:221984562-221990586:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.24565 0.72321 0.804945 0.933999 0.944192 0.560137 0.0162242 0.966912 0.814338 0.909091 0.940447 0.965714 785 787 chr2 222149601 222155632 chr2:222149601-222155632:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.137769 0.721847 0.737979 0.656147 0.921951 0.46875 0.0196078 0.867212 0.831611 0.504037 0.95741 0.610104 786 788 chr2 227064885 227070875 chr2:227064885-227070875:+:L1PA3:REF 12 + L1PA3 REF full-length COL4A4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0657819 0.791578 0.842896 0.910714 0.877398 0.924425 0.175767 0.926307 0.98763 0.840402 0.979036 0.771951 787 789 chr2 227544418 227546619 chr2:227544418-227546619:-:L1PA5:REF 11 - L1PA5 REF 3prime-truncated AGFG1 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.865221 0.838373 0.726842 0.837959 0.989754 0.835689 0.472406 0.846235 0.982143 0.84153 0.920601 788 790 chr2 228030894 228037043 chr2:228030894-228037043:+:L1PA4:REF 12 + L1PA4 REF full-length SPHKAP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.838162 0.127285 0.652008 0.523597 0.1141 0.588843 0.0127796 0.874275 0.865889 0.551724 0.596491 0.944444 789 791 chr2 228199138 228205299 chr2:228199138-228205299:-:L1PA4:REF 11 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.912572 0.485015 0.696555 0.604603 0.253012 0.330891 0.00258844 0.567061 0.741417 0.630409 0.936027 790 792 chr2 228419987 228426024 chr2:228419987-228426024:-:L1PA2:REF 10 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,HEK293,H1 0.102041 0.23913 0.85 0.662611 0.253275 0.0253807 0.0 0.61157 0.545455 0.830986 791 793 chr2 228568257 228574281 chr2:228568257-228574281:+:L1PA2:REF 12 + L1PA2 REF full-length LINC01807 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0899345 0.777155 0.92378 0.883343 0.63557 0.330312 0.0251012 0.0203081 0.406604 0.89166 0.830448 0.918824 792 794 chr2 228755693 228761717 chr2:228755693-228761717:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.634146 0.771871 0.946117 0.898895 0.591844 0.756255 0.0214329 0.869591 0.904207 0.889193 0.864023 0.960956 793 795 chr2 229441293 229441295 chr2:229441293-229441295:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip4267,1KGP:L1_umary_LINE1_525,Philippe:EXP_ID_0698 DNER HepG2 0.459519 794 796 chr2 229476842 229476844 chr2:229476842-229476844:+:L1HS:NONREF 5 + L1HS KNR euL1db:mrip4268,1KGP:L1_umary_LINE1_526,Philippe:EXP_ID_0699 DNER HEK293T,MCF7,HCT116,HEK293,H1 0.714106 0.82948 0.902778 0.886003 0.859281 795 797 chr2 230337069 230342513 chr2:230337069-230342513:-:L1HS:REF 11 - L1HS REF 3prime-truncated SP140L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.0813953 0.972208 0.980642 0.979102 0.500701 0.985152 0.00343446 0.00628743 0.981033 0.961881 0.951636 796 798 chr2 230619262 230622123 chr2:230619262-230622123:+:L1PA6:REF 11 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.939394 0.723577 0.977528 0.993333 0.9375 0.785714 0.992366 1.0 0.985714 0.95122 0.982456 797 799 chr2 232149196 232155229 chr2:232149196-232155229:-:L1HS:REF 12 - L1HS REF full-length DIS3L2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.176198 0.982686 0.957386 0.975052 0.972249 0.937973 0.929793 0.968074 0.987294 0.936937 0.961245 0.811271 798 800 chr2 232355238 232361245 chr2:232355238-232361245:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.892822 0.1309 0.899527 0.914174 0.916368 0.44 0.0871795 0.0138889 0.873807 0.908297 0.977099 0.970874 799 801 chr2 233577839 233583870 chr2:233577839-233583870:-:L1PA3:REF 10 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.0414508 0.936902 0.853242 0.837669 0.939394 0.964789 0.873239 0.939241 0.917647 0.971223 800 802 chr2 234775486 234781643 chr2:234775486-234781643:+:L1PA5:REF 11 + L1PA5 REF full-length 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.877133 0.848 0.932299 0.624021 0.449102 0.0142349 0.873016 0.942149 0.908602 0.858859 0.945783 801 803 chr2 234888389 234894419 chr2:234888389-234894419:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0816256 0.981528 0.882117 0.954787 0.0212472 0.956497 0.030153 0.465383 0.989314 0.926512 0.979906 0.771519 802 804 chr2 236383666 236389689 chr2:236383666-236389689:-:L1PA2:REF 12 - L1PA2 REF full-length IQCA1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.176826 0.81445 0.80547 0.859208 0.955545 0.922264 0.214254 0.971871 0.969368 0.781027 0.975923 0.774924 803 805 chr2 237843469 237849565 chr2:237843469-237849565:-:L1PA5:REF 12 - L1PA5 REF full-length RBM44 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.897651 0.547297 0.758681 0.841754 0.785294 0.557692 0.0729167 0.92284 0.957055 0.776062 0.816327 0.919355 804 806 chr2 240544494 240550522 chr2:240544494-240550522:+:L1PA3:REF 12 + L1PA3 REF full-length ANKMY1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906335 0.978403 0.981363 0.980407 0.919688 0.889323 0.908832 0.982852 0.983992 0.971212 0.90994 0.977692 805 807 chr3 809376 815406 chr3:809376-815406:+:L1PA3:REF 12 + L1PA3 REF full-length LINC01266 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.579264 0.684015 0.785514 0.815117 0.470558 0.957065 0.0149683 0.568083 0.831302 0.800203 0.818866 0.952799 806 808 chr3 1387560 1393571 chr3:1387560-1393571:+:L1PA2:REF 12 + L1PA2 REF full-length CNTN6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.117586 0.647807 0.716735 0.743622 0.348545 0.654676 0.00749625 0.344514 0.707704 0.690722 0.956888 0.868182 807 809 chr3 1913508 1919645 chr3:1913508-1919645:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.649351 0.0204082 0.16 0.313333 0.137931 0.164384 0.0285714 0.0648148 0.0631579 0.247423 0.396825 0.942857 808 810 chr3 2666594 2672735 chr3:2666594-2672735:-:L1PA5:REF 12 - L1PA5 REF full-length CNTN4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883058 0.482605 0.753005 0.80341 0.667339 0.651543 0.0109152 0.248785 0.688967 0.842294 0.805017 0.946392 809 811 chr3 3719386 3725382 chr3:3719386-3725382:+:L1PA2:REF 12 + L1PA2 REF full-length LOC100130207 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.817805 0.898915 0.821454 0.704689 0.617861 0.712222 0.048722 0.96711 0.842706 0.811321 0.838685 0.978142 810 812 chr3 3885605 3892070 chr3:3885605-3892070:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.738636 0.1 0.209302 0.182203 0.00884956 0.152941 0.0291262 0.460784 0.111111 0.149254 0.0756303 0.916667 811 813 chr3 3963076 3969110 chr3:3963076-3969110:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.113049 0.851685 0.671676 0.734682 0.166063 0.754864 0.0296069 0.28342 0.746221 0.762806 0.805498 0.601997 Brouha_2003:0.0 812 814 chr3 4253248 4259276 chr3:4253248-4259276:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.105085 0.829787 0.767568 0.768333 0.457143 0.653226 0.0454545 0.735426 0.763587 0.823129 0.849765 0.880734 813 815 chr3 4916534 4922591 chr3:4916534-4922591:+:L1HS:REF 12 + L1HS REF full-length BHLHE40-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0678225 0.802251 0.867843 0.799068 0.82255 0.85879 0.840121 0.904745 0.855613 0.882653 0.787034 0.893855 814 816 chr3 5376541 5377480 chr3:5376541-5377480:+:L1PA6:REF 5 + L1PA6 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,K562 0.789474 0.55 0.582915 0.309091 0.0348837 815 817 chr3 5590805 5596951 chr3:5590805-5596951:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.869565 0.826087 0.616279 0.712687 0.401544 0.15625 0.719388 0.460123 0.52551 0.722222 0.705357 0.97619 816 818 chr3 6266919 6273034 chr3:6266919-6273034:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883117 0.692708 0.711988 0.752758 0.318072 0.445491 0.0108147 0.556691 0.90628 0.796703 0.451273 0.940367 817 819 chr3 6484911 6490929 chr3:6484911-6490929:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.081209 0.40944 0.833857 0.826621 0.511247 0.766061 0.0113072 0.551493 0.945167 0.752595 0.845468 0.91749 818 820 chr3 6711039 6711041 chr3:6711039-6711041:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip4767,1KGP:L1_umary_LINE1_546 GRM7-AS3 IMR90 0.661905 819 821 chr3 6764136 6770100 chr3:6764136-6770100:-:L1PA3:REF 11 - L1PA3 REF full-length GRM7-AS3 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0844515 0.687552 0.791869 0.27689 0.747628 0.00336889 0.572228 0.94958 0.776484 0.789203 0.810705 820 822 chr3 6945054 6951190 chr3:6945054-6951190:-:L1PA4:REF 12 - L1PA4 REF full-length GRM7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.85732 0.563291 0.690585 0.648522 0.380009 0.407407 0.0207852 0.427232 0.967026 0.733983 0.744457 0.958309 821 823 chr3 7903494 7906799 chr3:7903494-7906799:-:L1P3:REF 12 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880952 0.00333333 0.233607 0.245798 0.00421941 0.03125 0.00473934 0.0164835 0.97807 0.154472 0.284916 0.941748 822 824 chr3 8611524 8617535 chr3:8611524-8617535:+:L1PA3:REF 11 + L1PA3 REF full-length SSUH2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.328205 0.836538 0.912371 0.951613 0.896321 0.85641 0.137809 0.561856 0.959596 0.887029 0.98324 823 825 chr3 8716076 8722097 chr3:8716076-8722097:+:L1PA3:REF 10 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293 0.492625 0.723926 0.803571 0.890127 0.739437 0.800847 0.288591 0.892377 0.87395 0.837989 824 826 chr3 11488672 11492490 chr3:11488672-11492490:-:L1HS:REF 12 - L1HS REF 3prime-truncated ATG7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.930925 0.93387 0.968434 0.973595 0.936275 0.95815 0.836114 0.950841 0.96568 0.956081 0.976161 0.945098 825 827 chr3 15186665 15192699 chr3:15186665-15192699:+:L1PA3:REF 12 + L1PA3 REF full-length COL6A4P1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.461267 0.820364 0.831305 0.859446 0.151895 0.258638 0.0161486 0.190492 0.308037 0.858521 0.974101 0.950038 826 828 chr3 16158871 16164990 chr3:16158871-16164990:-:L1PA6:REF 10 - L1PA6 REF full-length GALNT15 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.603175 0.0253807 0.757576 0.8 0.0649819 0.564103 0.0123457 0.703704 0.878788 0.441667 827 829 chr3 16676612 16682753 chr3:16676612-16682753:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.930103 0.562698 0.84326 0.759777 0.892887 0.852564 0.00560448 0.791199 0.713018 0.665929 0.866981 0.914005 828 830 chr3 17693113 17697953 chr3:17693113-17697953:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated TBC1D5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.830549 0.944544 0.9825 0.832814 0.718421 0.990698 0.289604 0.417544 0.981609 0.980952 0.976812 0.980645 829 831 chr3 17858274 17861391 chr3:17858274-17861391:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0101215 0.933636 0.896552 0.901856 0.855016 0.861289 0.125866 0.956081 0.567442 0.897508 0.069378 0.652898 830 832 chr3 18328056 18331287 chr3:18328056-18331287:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0898792 0.0328046 0.807064 0.786304 0.230301 0.448605 0.0117064 0.0258118 0.973482 0.860051 0.822625 0.87156 831 833 chr3 18516080 18520244 chr3:18516080-18520244:+:L1HS:REF 12 + L1HS REF 3prime-truncated SATB1-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.113939 0.492941 0.513089 0.527525 0.0818428 0.213283 0.0164416 0.420301 0.661236 0.5 0.851235 0.712375 832 834 chr3 18692573 18694307 chr3:18692573-18694307:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0635015 0.499748 0.781044 0.753852 0.354686 0.537347 0.0257302 0.547331 0.748332 0.751603 0.810793 0.866841 833 835 chr3 18930482 18936506 chr3:18930482-18936506:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0555937 0.860265 0.804984 0.797121 0.663043 0.603491 0.0253807 0.651463 0.846809 0.829114 0.869519 0.836186 834 836 chr3 18957806 18963833 chr3:18957806-18963833:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0357698 0.707263 0.736041 0.743359 0.599075 0.565084 0.00617708 0.88062 0.81402 0.735562 0.789033 0.807874 835 837 chr3 18975949 18982086 chr3:18975949-18982086:+:L1PA3:REF 7 + L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,MCF7,HCT116,HEK293 0.588889 0.610526 0.661191 0.352941 0.0820896 0.426667 0.683333 836 838 chr3 19097368 19103347 chr3:19097368-19103347:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0779468 0.390681 0.282983 0.652296 0.400376 0.415 0.0 0.125237 0.779964 0.605114 0.743421 0.516908 837 839 chr3 19370610 19376625 chr3:19370610-19376625:-:L1PA2:REF 12 - L1PA2 REF full-length KCNH8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.213135 0.75562 0.669104 0.656489 0.522118 0.418769 0.0195204 0.393028 0.749644 0.778107 0.631963 0.931596 838 840 chr3 19855048 19861075 chr3:19855048-19861075:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0886918 0.87615 0.837094 0.877503 0.76484 0.897059 0.276366 0.685874 0.908714 0.897133 0.896482 0.942004 839 841 chr3 20707402 20707404 chr3:20707402-20707404:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip4799,Philippe:EXP_ID_0772 BJ,HeLaS3 0.912704 0.771622 Beck_2010:0.0 840 842 chr3 21249724 21255755 chr3:21249724-21255755:-:L1PA2:REF 10 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.932153 0.442982 0.953191 0.790076 0.451327 0.53 0.17094 0.754098 0.94 0.62439 841 843 chr3 21364853 21367295 chr3:21364853-21367295:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.865719 0.259542 0.846293 0.515385 0.0338983 0.150171 0.0813743 0.44389 0.205556 0.651515 0.333333 0.876543 842 844 chr3 21556087 21561608 chr3:21556087-21561608:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated ZNF385D MRC5 0.333333 843 845 chr3 22082078 22086635 chr3:22082078-22086635:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.819533 0.134106 0.577075 0.388108 0.140873 0.537671 0.00928074 0.257831 0.179825 0.434978 0.654054 0.872449 844 846 chr3 22737735 22743754 chr3:22737735-22743754:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.201578 0.830079 0.803899 0.804265 0.468037 0.441088 0.0712055 0.00761421 0.878407 0.819599 0.886872 0.908224 845 847 chr3 22801378 22807403 chr3:22801378-22807403:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.100344 0.545638 0.684756 0.680063 0.212103 0.697796 0.0106171 0.53603 0.608357 0.68568 0.810829 0.701016 846 848 chr3 23030417 23036543 chr3:23030417-23036543:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.723684 0.173575 0.785235 0.671217 0.82017 0.216359 0.0154799 0.0392523 0.950783 0.749226 0.942602 0.951482 847 849 chr3 23349243 23355385 chr3:23349243-23355385:+:L1PA3:REF 12 + L1PA3 REF full-length UBE2E2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.9375 0.860488 0.982676 0.979301 0.973974 0.988024 0.0226501 0.978022 0.967136 0.983333 0.969363 0.964427 848 850 chr3 24089454 24095487 chr3:24089454-24095487:-:L1PA2:REF 12 - L1PA2 REF full-length LINC00691 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0881188 0.934041 0.970247 0.982662 0.632192 0.95082 0.494449 0.9401 0.979915 0.95993 0.965276 0.946293 849 851 chr3 25199455 25205563 chr3:25199455-25205563:-:L1PA4:REF 12 - L1PA4 REF full-length RARB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.879415 0.349854 0.734719 0.69358 0.731461 0.1893 0.01375 0.56192 0.255042 0.680473 0.799764 0.862843 850 852 chr3 26036528 26042769 chr3:26036528-26042769:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.877358 0.297948 0.608234 0.645974 0.440884 0.151079 0.00850547 0.48524 0.699338 0.669065 0.576043 0.90676 851 853 chr3 26239082 26245212 chr3:26239082-26245212:-:L1PA3:REF 10 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.918129 0.625 0.574468 0.689655 0.27907 0.141791 0.0 0.020202 0.761905 0.743056 852 854 chr3 26384735 26390767 chr3:26384735-26390767:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0526696 0.792703 0.830817 0.721379 0.56248 0.740847 0.0260744 0.632804 0.899644 0.77451 0.809041 0.863792 853 855 chr3 26398017 26404045 chr3:26398017-26404045:-:L1HS:REF 11 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.283647 0.565017 0.724608 0.766244 0.452321 0.593698 0.18143 0.780533 0.73444 0.782765 0.859956 Philippe_2016:1 854 856 chr3 26530128 26534456 chr3:26530128-26534456:-:L1PA4:REF 6 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,K562,HCT116 0.904762 0.05 0.270833 0.390071 0.0238095 0.368421 855 857 chr3 26783096 26789130 chr3:26783096-26789130:+:L1PA3:REF 9 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90 0.663968 0.690058 0.809091 0.788462 0.55 0.015625 0.714286 0.799065 0.756098 856 858 chr3 26881365 26887510 chr3:26881365-26887510:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.859882 0.273792 0.592845 0.682864 0.0866373 0.166124 0.0164706 0.321962 0.639655 0.597468 0.409247 0.921739 857 859 chr3 27262107 27263952 chr3:27262107-27263952:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated NEK10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880705 0.958367 0.914198 0.969617 0.556807 0.787928 0.0091623 0.712583 0.964853 0.921986 0.880613 0.938429 858 860 chr3 27815983 27821983 chr3:27815983-27821983:-:L1PA7:REF 12 - L1PA7 REF full-length LINC01980 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.107357 0.853347 0.785631 0.842366 0.107162 0.877637 0.0163934 0.874085 0.976457 0.85623 0.955357 0.758123 859 861 chr3 28059242 28065270 chr3:28059242-28065270:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.0221825 0.874232 0.855617 0.874595 0.0944079 0.807885 0.0695689 0.427545 0.894578 0.898618 0.830721 860 862 chr3 29108111 29112113 chr3:29108111-29112113:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.159147 0.771442 0.924242 0.978311 0.842779 0.675393 0.0191972 0.671447 0.974846 0.971451 0.973708 0.963377 861 863 chr3 29993917 29999918 chr3:29993917-29999918:+:L1PA4:REF 11 + L1PA4 REF full-length RBMS3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.858597 0.858088 0.955535 0.982488 0.935865 0.793558 0.970186 0.978531 0.895075 0.951708 0.959811 862 864 chr3 30049918 30050507 chr3:30049918-30050507:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.904051 0.925197 0.939145 0.948929 0.928455 0.882353 0.0469314 0.898305 0.976834 0.951648 0.950216 0.981685 863 865 chr3 30213408 30216503 chr3:30213408-30216503:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.920635 0.782222 0.973054 0.773504 0.557471 0.782609 0.00378788 0.922131 0.791667 0.777143 0.886861 0.973333 864 866 chr3 30377889 30377891 chr3:30377889-30377891:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip4831,Philippe:EXP_ID_0783 HepG2 0.908749 865 867 chr3 32010453 32016606 chr3:32010453-32016606:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91637 0.874627 0.766332 0.83698 0.905861 0.874627 0.00583658 0.980519 0.956912 0.828671 0.948498 0.970085 866 868 chr3 33281055 33287153 chr3:33281055-33287153:-:L1PA5:REF 11 - L1PA5 REF full-length FBXL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.915194 0.923881 0.975694 0.986288 0.966486 0.977401 0.984772 0.985095 0.988142 0.980769 0.96978 867 869 chr3 33671454 33677714 chr3:33671454-33677714:+:L1PA3:REF 11 + L1PA3 REF full-length CLASP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.940426 0.985915 0.990741 0.973585 0.954198 1.0 0.917293 0.984615 0.989418 0.926829 0.991935 868 870 chr3 34079711 34085844 chr3:34079711-34085844:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.835185 0.412467 0.648387 0.574508 0.107425 0.360465 0.0329154 0.901266 0.587387 0.706897 0.819565 0.934211 869 871 chr3 34089897 34090548 chr3:34089897-34090548:-:L1PA3:REF 6 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,MRC5,K562,HCT116,HEK293 0.90604 0.487179 0.747989 0.0522388 0.406417 0.751553 870 872 chr3 34094086 34100223 chr3:34094086-34100223:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.841499 0.172727 0.439326 0.49966 0.139979 0.230461 0.0756757 0.915517 0.199309 0.459519 0.361556 0.84466 871 873 chr3 34120347 34122726 chr3:34120347-34122726:-:L1PA6:REF 9 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,HCT116,IMR90,HEK293 0.652482 0.309598 0.704 0.480726 0.106017 0.0294118 0.715054 0.75 0.7552 872 874 chr3 34413126 34419172 chr3:34413126-34419172:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.100251 0.878252 0.796296 0.874079 0.758824 0.7806 0.047259 0.873362 0.830732 0.836676 0.813406 0.874251 873 875 chr3 34427736 34433885 chr3:34427736-34433885:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.916556 0.166175 0.587888 0.583694 0.245592 0.206122 0.011236 0.748837 0.65142 0.619048 0.592701 0.896667 874 876 chr3 35103912 35109933 chr3:35103912-35109933:+:L1PA3:REF 1 + L1PA3 REF full-length LOC101928135 MRC5 0.514019 875 877 chr3 35225817 35231938 chr3:35225817-35231938:+:L1PA4:REF 12 + L1PA4 REF full-length LOC101928135 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911932 0.714868 0.738544 0.769231 0.485981 0.533333 0.0252525 0.92 0.730952 0.742268 0.882883 0.96347 876 878 chr3 35454617 35458296 chr3:35454617-35458296:+:L1HS:REF 11 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.928885 0.637857 0.658537 0.576752 0.450077 0.464226 0.00468604 0.912121 0.640625 0.852814 0.962477 877 879 chr3 35818653 35824692 chr3:35818653-35824692:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890345 0.860042 0.760779 0.704259 0.501418 0.591656 0.0227457 0.724455 0.779474 0.770909 0.901015 0.963738 878 880 chr3 38405400 38411538 chr3:38405400-38411538:+:L1PA3:REF 12 + L1PA3 REF full-length XYLB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.78294 0.882212 0.856115 0.742192 0.975895 0.989796 0.729368 0.973384 0.979866 0.994286 0.979737 0.851711 879 881 chr3 38584590 38584592 chr3:38584590-38584592:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip4862,1KGP:L1_umary_LINE1_580,Philippe:EXP_ID_0787 SCN5A H1 0.761905 Beck_2010:101.0 880 882 chr3 38932236 38938390 chr3:38932236-38938390:+:L1PA3:REF 12 + L1PA3 REF full-length SCN11A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.8125 0.566102 0.56875 0.759651 0.490323 0.490066 0.00555556 0.769841 0.59751 0.760563 0.656085 0.825112 881 883 chr3 39304219 39309843 chr3:39304219-39309843:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.816327 0.106383 0.515152 0.471795 0.202128 0.0363636 0.0178571 0.903226 0.636364 0.296296 0.72043 0.893939 882 884 chr3 39550909 39557348 chr3:39550909-39557348:+:L1PA7:REF 11 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.832298 0.122549 0.306859 0.351878 0.35082 0.00706714 0.540984 0.684211 0.377953 0.606426 0.844156 883 885 chr3 39839557 39842926 chr3:39839557-39842926:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated MYRIP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872727 0.641304 0.425 0.25 0.222222 0.27907 0.0181818 0.97561 0.820896 0.230769 0.836735 0.897436 884 886 chr3 39953562 39959686 chr3:39953562-39959686:+:L1PA5:REF 12 + L1PA5 REF full-length MYRIP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.870588 0.835556 0.716253 0.46677 0.138122 0.0921659 0.0108401 0.940299 0.617486 0.515152 0.876984 0.957265 885 887 chr3 39994053 39999999 chr3:39994053-39999999:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated MYRIP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.877456 0.839506 0.851282 0.672781 0.265625 0.562771 0.0155039 0.847222 0.781903 0.760714 0.822139 0.961637 886 888 chr3 40154990 40161029 chr3:40154990-40161029:-:L1PA3:REF 12 - L1PA3 REF full-length MYRIP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908181 0.845676 0.886067 0.694982 0.654738 0.862375 0.0989615 0.949474 0.9375 0.78705 0.926773 0.856877 887 889 chr3 40240315 40240603 chr3:40240315-40240603:+:L1P1:REF 11 + L1P1 REF 3prime-truncated MYRIP HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.838088 0.777234 0.731621 0.607276 0.414508 0.224238 0.947977 0.958614 0.754545 0.864211 0.942275 888 890 chr3 40902374 40908432 chr3:40902374-40908432:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.282667 0.962466 0.666667 0.726542 0.822437 0.765207 0.0669895 0.942029 0.874885 0.669776 0.947054 0.346087 889 891 chr3 40953869 40960021 chr3:40953869-40960021:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.766372 0.781931 0.825 0.738989 0.763636 0.854167 0.973881 0.886105 0.757895 0.946809 0.969072 890 892 chr3 41370356 41376413 chr3:41370356-41376413:+:L1PA7:REF 12 + L1PA7 REF full-length ULK4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.853147 0.791667 0.646341 0.642384 0.655172 0.683333 0.0 0.888889 0.95614 0.722222 0.630769 0.833333 891 893 chr3 41616351 41622775 chr3:41616351-41622775:+:L1PA8:REF 12 + L1PA8 REF full-length ULK4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.82716 0.946237 0.8 0.763006 0.875 0.871795 0.011236 1.0 0.951613 0.6 0.92126 0.911111 892 894 chr3 41642194 41648350 chr3:41642194-41648350:-:L1PA4:REF 12 - L1PA4 REF full-length ULK4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.924018 0.963197 0.944134 0.962996 0.940341 0.952811 0.0751678 0.968373 0.979874 0.957219 0.956522 0.963265 893 895 chr3 43064774 43070790 chr3:43064774-43070790:+:L1PA2:REF 12 + L1PA2 REF full-length GASK1A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.888512 0.845521 0.836297 0.917842 0.873318 0.758532 0.147017 0.913669 0.971429 0.9 0.96235 0.914956 894 896 chr3 43565822 43571847 chr3:43565822-43571847:+:L1PA2:REF 12 + L1PA2 REF full-length ANO10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.133756 0.980481 0.968967 0.985124 0.0497857 0.965243 0.00897959 0.281853 0.0461538 0.96745 0.970447 0.785154 895 897 chr3 43659085 43660672 chr3:43659085-43660672:+:L1PA7:REF 4 + L1PA7 REF 3prime-truncated ANO10 HepG2,MRC5,HEK293T,K562 0.350877 0.407008 0.761905 0.435897 896 898 chr3 43678954 43685094 chr3:43678954-43685094:+:L1PA4:REF 12 + L1PA4 REF full-length ANO10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923012 0.716258 0.931354 0.969749 0.96415 0.9625 0.769815 0.978448 0.980083 0.916293 0.990033 0.95302 897 899 chr3 44822089 44824143 chr3:44822089-44824143:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated KIF15 MRC5 0.584906 898 900 chr3 46315213 46315215 chr3:46315213-46315215:+:L1HS:NONREF 1 + L1HS KNR Philippe:EXP_ID_0793 HeLaS3 0.830234 899 901 chr3 46783105 46789138 chr3:46783105-46789138:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.211039 0.880682 0.81268 0.844022 0.815534 0.60396 0.0114548 0.864169 0.930348 0.876712 0.926316 0.884013 900 902 chr3 50921202 50922670 chr3:50921202-50922670:-:L1PA5:REF 8 - L1PA5 REF 3prime-truncated DOCK3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,IMR90 0.666667 0.223176 0.452991 0.37386 0.788732 0.235294 0.0 0.392523 901 903 chr3 50973137 50979172 chr3:50973137-50979172:-:L1PA3:REF 12 - L1PA3 REF full-length DOCK3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0480366 0.90539 0.84252 0.835469 0.00491918 0.900786 0.237095 0.829349 0.977372 0.890253 0.942497 0.913347 902 904 chr3 51091710 51092830 chr3:51091710-51092830:+:L1P3:REF 9 + L1P3 REF 3prime-truncated DOCK3 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293 0.925 0.952 0.721519 0.746154 0.952381 0.0 0.982609 0.618182 0.96 903 905 chr3 51095923 51098075 chr3:51095923-51098075:-:L1P3:REF 1 - L1P3 REF 3prime-truncated DOCK3 MRC5 0.951456 904 906 chr3 51199048 51205178 chr3:51199048-51205178:+:L1PA3:REF 12 + L1PA3 REF full-length DOCK3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.894092 0.739687 0.782772 0.80495 0.922124 0.554662 0.00835655 0.659955 0.98135 0.828571 0.81547 0.94052 905 907 chr3 51368115 51369569 chr3:51368115-51369569:+:L1PA5:REF 10 + L1PA5 REF 3prime-truncated DOCK3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,H1 0.820144 0.0794979 0.467105 0.577778 0.619048 0.626263 0.0135135 0.875969 0.3 0.909091 906 908 chr3 51455920 51462098 chr3:51455920-51462098:+:L1PA4:REF 2 + L1PA4 REF full-length DCAF1 2102Ep,MRC5 0.528571 0.649351 907 909 chr3 53365276 53371325 chr3:53365276-53371325:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.131307 0.934794 0.882754 0.942602 0.385259 0.940341 0.555556 0.232019 0.968047 0.923077 0.935922 0.894394 Rodriguez-Martin_2020:4,Tubio_2014:1 908 910 chr3 53391155 53397284 chr3:53391155-53397284:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.44697 909 911 chr3 53440758 53446902 chr3:53440758-53446902:-:L1PA5:REF 9 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90 0.698864 0.797619 0.592105 0.598383 0.729814 0.347826 0.0 0.7 0.481928 910 912 chr3 53921747 53927805 chr3:53921747-53927805:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0308778 0.529812 0.880179 0.858336 0.00857889 0.00326797 0.00672143 0.551901 0.470487 0.884855 0.954245 0.944077 911 913 chr3 54284955 54291072 chr3:54284955-54291072:+:L1PA4:REF 12 + L1PA4 REF full-length CACNA2D3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.947256 0.681863 0.847196 0.763452 0.927877 0.889984 0.00682594 0.958065 0.885458 0.815261 0.970487 0.971625 912 914 chr3 54394322 54400323 chr3:54394322-54400323:-:L1HS:REF 12 - L1HS REF full-length CACNA2D3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.554945 0.631219 0.79485 0.780465 0.910156 0.902873 0.0286104 0.863095 0.837613 0.77907 0.934679 0.946309 913 915 chr3 54458770 54464920 chr3:54458770-54464920:-:L1PA3:REF 12 - L1PA3 REF full-length CACNA2D3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.724936 0.764511 0.847015 0.794224 0.847091 0.906077 0.174283 0.7669 0.88309 0.871465 0.947692 0.867424 914 916 chr3 54468131 54474552 chr3:54468131-54474552:+:L1PA7:REF 12 + L1PA7 REF full-length CACNA2D3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.845528 0.548344 0.677898 0.580508 0.742638 0.898947 0.0 0.664179 0.624585 0.635015 0.903292 0.874302 915 917 chr3 55046104 55052129 chr3:55046104-55052129:-:L1PA2:REF 12 - L1PA2 REF full-length CACNA2D3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.782274 0.514497 0.936587 0.969283 0.850093 0.956094 0.0194585 0.850868 0.744792 0.946161 0.888823 0.964613 916 918 chr3 55754551 55754553 chr3:55754551-55754553:+:L1HS:NONREF 8 + L1HS KNR euL1db:mrip4908,1KGP:L1_umary_LINE1_590,Philippe:EXP_ID_0796 ERC2 2102Ep,BJ,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.0231293 0.918997 0.55838 0.0158033 0.951952 0.879769 0.938503 0.980913 Gardner_2017:2,Helman_2013:1,Rodriguez-Martin_2020:15,Tubio_2014:3 917 919 chr3 55831626 55837762 chr3:55831626-55837762:+:L1PA4:REF 12 + L1PA4 REF full-length ERC2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.785388 0.330972 0.91342 0.785362 0.860515 0.926357 0.037037 0.968 0.953069 0.837573 0.961373 0.837209 918 920 chr3 56213069 56219149 chr3:56213069-56219149:+:L1PA4:REF 12 + L1PA4 REF full-length ERC2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910633 0.495963 0.829706 0.789602 0.804878 0.45098 0.0114286 0.900826 0.579915 0.763547 0.961131 0.9 919 921 chr3 56945132 56951290 chr3:56945132-56951290:+:L1PA4:REF 12 + L1PA4 REF full-length ARHGEF3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.933333 0.968284 0.841176 0.894595 0.925889 0.951111 0.0299296 0.971154 0.981436 0.867568 0.954819 0.970845 920 922 chr3 57324583 57330726 chr3:57324583-57330726:+:L1PA3:REF 12 + L1PA3 REF full-length DNAH12 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.907886 0.850654 0.832643 0.863228 0.932914 0.773913 0.416554 0.961756 0.978763 0.828877 0.909392 0.92437 921 923 chr3 57476938 57483084 chr3:57476938-57483084:+:L1PA4:REF 4 + L1PA4 REF full-length DNAH12 2102Ep,MRC5,HEK293T,HCT116 0.618421 0.5 0.609375 0.586957 922 924 chr3 58275643 58281729 chr3:58275643-58281729:-:L1PA6:REF 1 - L1PA6 REF full-length ABHD6 MRC5 0.932836 923 925 chr3 58758539 58764668 chr3:58758539-58764668:-:L1PA4:REF 12 - L1PA4 REF full-length C3orf67 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.931412 0.44467 0.868293 0.911354 0.839305 0.434679 0.980349 0.933993 0.979616 0.852861 0.864567 0.97619 924 926 chr3 58806577 58812715 chr3:58806577-58812715:+:L1PA3:REF 12 + L1PA3 REF full-length C3orf67 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.897727 0.737166 0.914894 0.929057 0.887172 0.557756 0.949309 0.933824 0.961712 0.915323 0.956522 0.97006 925 927 chr3 58816278 58822304 chr3:58816278-58822304:+:L1PA2:REF 12 + L1PA2 REF full-length C3orf67 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.669571 0.80868 0.94623 0.946291 0.86564 0.792784 0.914505 0.927107 0.964613 0.912304 0.942664 0.961487 926 928 chr3 58842154 58848179 chr3:58842154-58848179:+:L1PA2:REF 12 + L1PA2 REF full-length C3orf67 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0753156 0.79186 0.967089 0.973747 0.904436 0.781392 0.00451322 0.924097 0.981918 0.952657 0.944119 0.817085 927 929 chr3 58930787 58936933 chr3:58930787-58936933:+:L1PA3:REF 10 + L1PA3 REF full-length C3orf67 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293,H1 0.813472 0.596154 0.976744 0.954023 0.916084 0.527132 0.979021 0.865385 0.818792 0.948387 928 930 chr3 58942283 58944327 chr3:58942283-58944327:+:L1P3:REF 1 + L1P3 REF 3prime-truncated C3orf67 MRC5 0.651079 929 931 chr3 59395156 59400281 chr3:59395156-59400281:+:L1PA4:REF 1 + L1PA4 REF 3prime-truncated IMR90 0.9 930 932 chr3 59613855 59619953 chr3:59613855-59619953:+:L1PA5:REF 11 + L1PA5 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.431452 0.793893 0.911298 0.897476 0.14939 0.025788 0.919048 0.834572 0.821192 0.967089 0.941463 931 933 chr3 60710285 60715325 chr3:60710285-60715325:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated FHIT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.952727 0.74 0.719057 0.906318 0.943026 0.162602 0.15873 0.865497 0.986667 0.925466 0.972696 0.962366 932 934 chr3 60960425 60966566 chr3:60960425-60966566:-:L1PA5:REF 11 - L1PA5 REF full-length FHIT 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.839286 0.940594 0.559322 0.723404 0.968944 0.642857 0.928571 0.99177 0.770115 0.989011 0.967033 933 935 chr3 61042988 61049130 chr3:61042988-61049130:+:L1PA5:REF 12 + L1PA5 REF full-length FHIT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863839 0.962175 0.554779 0.571843 0.921649 0.126316 0.703518 0.955224 0.968254 0.656388 0.939297 0.943478 934 936 chr3 61211021 61217154 chr3:61211021-61217154:+:L1PA3:REF 7 + L1PA3 REF full-length FHIT HepG2,BJ,HEK293T,HeLaS3,HCT116,IMR90,HEK293 0.833034 0.65896 0.859375 0.235294 0.968254 0.73494 0.752941 935 937 chr3 61259278 61264274 chr3:61259278-61264274:-:L1PA7:REF 9 - L1PA7 REF 3prime-truncated FHIT 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293 0.899281 0.285714 0.509091 0.542773 0.872881 0.0277778 0.985714 0.576271 0.905172 936 938 chr3 61364032 61365006 chr3:61364032-61365006:+:L1P2:REF 1 + L1P2 REF 3prime-truncated MRC5 0.229167 937 939 chr3 63136268 63142301 chr3:63136268-63142301:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0299804 0.881805 0.78345 0.779202 0.43925 0.659939 0.0150309 0.312119 0.861397 0.809609 0.888079 0.883095 938 940 chr3 63211708 63217714 chr3:63211708-63217714:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.131849 0.0881157 0.347773 0.291667 0.589192 0.666286 0.0367055 0.161401 0.847983 0.305461 0.745158 0.325455 939 941 chr3 63255612 63261711 chr3:63255612-63261711:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.765182 0.756809 0.745592 0.647773 0.341518 0.0769231 0.0675676 0.519497 0.533898 0.763285 0.931373 0.887179 940 942 chr3 63645170 63651333 chr3:63645170-63651333:+:L1PA4:REF 12 + L1PA4 REF full-length SNTN 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0779221 0.837838 0.826972 0.749112 0.582278 0.188235 0.0196078 0.0116225 0.772876 0.753846 0.907816 0.321429 941 943 chr3 63693928 63695195 chr3:63693928-63695195:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.787302 0.0242424 0.513834 0.288421 0.0238806 0.0510204 0.0 0.457038 0.286738 0.47651 0.403061 0.85124 942 944 chr3 63733312 63739364 chr3:63733312-63739364:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.232229 0.537301 0.901355 0.826176 0.454706 0.634228 0.261404 0.813119 0.763711 0.889655 0.855299 0.925806 943 945 chr3 64776493 64779116 chr3:64776493-64779116:+:L1PA7:REF 10 + L1PA7 REF 3prime-truncated ADAMTS9-AS2 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.848921 0.174242 0.6875 0.652525 0.833333 0.556291 0.466667 0.725 0.858696 0.928571 944 946 chr3 65220271 65220867 chr3:65220271-65220867:-:L1P2:REF 11 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.943894 0.21446 0.752809 0.760728 0.688184 0.140127 0.0280561 0.72619 0.618357 0.767528 0.795031 945 947 chr3 65509292 65515316 chr3:65509292-65515316:+:L1PA2:REF 12 + L1PA2 REF full-length MAGI1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0879733 0.976903 0.918946 0.870836 0.426342 0.8049 0.106789 0.282186 0.985233 0.833619 0.943805 0.698057 946 948 chr3 66771155 66772282 chr3:66771155-66772282:-:L1P3:REF 3 - L1P3 REF 3prime-truncated HepG2,MRC5,HEK293T 0.5625 0.943548 0.9 947 949 chr3 66842801 66848943 chr3:66842801-66848943:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908754 0.84111 0.815227 0.88989 0.884886 0.481717 0.0534521 0.914074 0.906225 0.94825 0.90445 0.954365 948 950 chr3 67139739 67142859 chr3:67139739-67142859:-:L1PA8:REF 9 - L1PA8 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293 0.928571 0.6 0.734375 0.898649 0.516667 0.0 0.986111 0.8 0.884615 949 951 chr3 67147643 67153797 chr3:67147643-67153797:+:L1PA3:REF 8 + L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116 0.784615 0.805556 0.765517 0.259542 0.269504 0.00888889 0.625 0.542484 950 952 chr3 67153986 67160430 chr3:67153986-67160430:+:L1PA7:REF 1 + L1PA7 REF full-length MRC5 0.136364 951 953 chr3 67393029 67399181 chr3:67393029-67399181:+:L1PA3:REF 12 + L1PA3 REF full-length SUCLG2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.947748 0.982987 0.986379 0.984707 0.950719 0.941964 0.883212 0.990338 0.916762 0.90566 0.898283 0.989975 952 954 chr3 67726858 67727223 chr3:67726858-67727223:-:L1P1:REF 12 - L1P1 REF 3prime-truncated SUCLG2-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.844495 0.839192 0.711557 0.731223 0.534604 0.0989011 0.0034904 0.790323 0.95 0.692073 0.679128 0.845238 953 955 chr3 67764184 67764923 chr3:67764184-67764923:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated SUCLG2-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.904762 0.912698 0.766423 0.829978 0.463964 0.0853659 0.0 0.613861 0.855967 0.654762 0.787879 0.944444 954 956 chr3 67775624 67782079 chr3:67775624-67782079:-:L1PA7:REF 12 - L1PA7 REF full-length SUCLG2-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.851602 0.917889 0.126524 0.379203 0.692171 0.378505 0.0795756 0.957704 0.933981 0.28739 0.748441 0.948339 955 957 chr3 67947816 67953946 chr3:67947816-67953946:+:L1PA6:REF 12 + L1PA6 REF full-length SUCLG2-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.496183 0.032032 0.437164 0.333783 0.107554 0.183333 0.00487805 0.0466019 0.228643 0.313984 0.417462 0.732861 956 958 chr3 68076319 68082339 chr3:68076319-68082339:-:L1PA3:REF 12 - L1PA3 REF full-length TAFA1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.812675 0.718535 0.812354 0.755493 0.492996 0.551313 0.032872 0.753333 0.854612 0.808661 0.793233 0.974586 957 959 chr3 68684388 68686911 chr3:68684388-68686911:-:L1P3:REF 12 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.842391 0.316667 0.671329 0.530093 0.0673077 0.153846 0.0 0.684211 0.354167 0.537037 0.571429 0.875 958 960 chr3 69475205 69481363 chr3:69475205-69481363:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.73899 0.644571 0.732416 0.716366 0.823529 0.666667 0.0261438 0.929167 0.762326 0.767932 0.811052 0.950562 959 961 chr3 69631368 69637484 chr3:69631368-69637484:-:L1PA6:REF 9 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90 0.638889 0.0347222 0.666667 0.648536 0.638889 0.410256 0.0 0.904 0.818182 960 962 chr3 70285056 70291083 chr3:70285056-70291083:-:L1PA3:REF 12 - L1PA3 REF full-length MDFIC2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0513566 0.781935 0.813031 0.848777 0.193878 0.777003 0.00718133 0.866388 0.840074 0.874477 0.959432 0.778816 961 963 chr3 70675668 70681798 chr3:70675668-70681798:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.894472 0.693798 0.796443 0.903259 0.785714 0.536885 0.0253968 0.923313 0.555762 0.901575 0.946701 0.976471 962 964 chr3 72710341 72716487 chr3:72710341-72716487:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883008 0.952247 0.879121 0.876387 0.944223 0.684211 0.489051 0.962025 0.976898 0.916031 0.931217 0.972477 963 965 chr3 73990712 73996834 chr3:73990712-73996834:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90855 0.855963 0.846956 0.842796 0.627337 0.641772 0.0095339 0.147826 0.898864 0.887204 0.779182 0.975813 964 966 chr3 74156962 74163113 chr3:74156962-74163113:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87933 0.232007 0.618681 0.629073 0.045292 0.119107 0.00621118 0.199675 0.534538 0.76 0.48927 0.930417 965 967 chr3 74794138 74800348 chr3:74794138-74800348:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.666667 0.0113636 0.134146 0.0921053 0.0138889 0.0 0.0357143 0.0 0.508772 0.0925926 0.0319149 0.840909 966 968 chr3 75091959 75098014 chr3:75091959-75098014:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.143925 0.712 0.709871 0.722877 0.318036 0.371298 0.0163132 0.767303 0.738144 0.774834 0.735632 0.805861 967 969 chr3 75119849 75125881 chr3:75119849-75125881:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.67666 0.790637 0.737942 0.743676 0.679435 0.698113 0.0863158 0.592058 0.721504 0.735294 0.726968 0.95082 968 970 chr3 75273461 75279470 chr3:75273461-75279470:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90824 0.641915 0.924155 0.763231 0.522078 0.571595 0.017871 0.624169 0.690118 0.866606 0.803359 0.962896 969 971 chr3 75707464 75708765 chr3:75707464-75708765:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.424312 0.0336879 0.0959119 0.262272 0.0276243 0.12234 0.00894855 0.0311688 0.125296 0.220963 0.0627306 0.273016 970 972 chr3 75831756 75837912 chr3:75831756-75837912:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.867797 0.167617 0.563504 0.615894 0.508704 0.0619469 0.0 0.167816 0.900344 0.64939 0.316832 0.939655 971 973 chr3 77210593 77216723 chr3:77210593-77216723:-:L1PA4:REF 12 - L1PA4 REF full-length ROBO2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.933594 0.479532 0.679245 0.837061 0.963855 0.120879 0.815789 0.450331 0.974684 0.72549 0.817204 0.979167 972 974 chr3 77756444 77762685 chr3:77756444-77762685:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.9 0.057971 0.828283 0.839623 0.776316 0.0 0.0 0.347826 0.770115 0.765957 0.435484 0.914894 973 975 chr3 77763677 77769678 chr3:77763677-77769678:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.185867 0.729527 0.876314 0.872661 0.879525 0.6733 0.0038961 0.721297 0.974527 0.830534 0.821021 0.970414 974 976 chr3 78487036 78493167 chr3:78487036-78493167:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.864917 0.449718 0.574427 0.784047 0.777477 0.668122 0.0117188 0.51497 0.885167 0.710817 0.600724 0.863918 975 977 chr3 78675184 78681346 chr3:78675184-78681346:+:L1PA3:REF 12 + L1PA3 REF full-length ROBO1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.803743 0.981656 0.96987 0.974219 0.972472 0.915978 0.037871 0.00654022 0.967976 0.929496 0.973529 0.739931 976 978 chr3 78944526 78950672 chr3:78944526-78950672:+:L1PA4:REF 12 + L1PA4 REF full-length ROBO1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921466 0.979775 0.9701 0.972313 0.956456 0.968872 0.0202899 0.953033 0.968696 0.908772 0.970093 0.958199 977 979 chr3 80541011 80541013 chr3:80541011-80541013:-:L1HS:NONREF 6 - L1HS KNR euL1db:mrip4990,Philippe:EXP_ID_0806 BJ,HEK293T,K562,MCF7,HEK293,H1 0.857143 0.923077 0.0236025 0.93049 0.864595 0.974281 Gardner_2017:1,Rodriguez-Martin_2020:3 978 980 chr3 80891646 80897665 chr3:80891646-80897665:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.144928 0.869235 0.80848 0.723611 0.898886 0.74606 0.0199147 0.854603 0.980854 0.860759 0.645081 0.969147 979 981 chr3 81010919 81011739 chr3:81010919-81011739:+:L1P1:REF 12 + L1P1 REF 3prime-truncated LINC02027 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.847656 0.29717 0.425676 0.395522 0.568493 0.15625 0.0197368 0.546053 0.965517 0.5 0.133065 0.958333 980 982 chr3 81051389 81057413 chr3:81051389-81057413:-:L1PA2:REF 12 - L1PA2 REF full-length LINC02027 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0524831 0.819718 0.791765 0.790958 0.848596 0.897633 0.0210697 0.607969 0.938448 0.794003 0.789756 0.85619 981 983 chr3 81878123 81884278 chr3:81878123-81884278:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910873 0.673644 0.849765 0.816738 0.824639 0.914938 0.0411255 0.851296 0.97561 0.819608 0.766476 0.959524 982 984 chr3 82095700 82095703 chr3:82095700-82095703:-:L1HS:NONREF 3 - L1HS KNR euL1db:mrip5002,1KGP:L1_umary_LINE1_624,Philippe:EXP_ID_0810 LINC02008 2102Ep,BJ,MCF7 0.0214656 0.903199 0.794904 983 985 chr3 82104884 82111042 chr3:82104884-82111042:-:L1PA3:REF 12 - L1PA3 REF full-length LINC02008 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901435 0.929737 0.798541 0.725253 0.854417 0.736549 0.00723764 0.808612 0.987521 0.765766 0.758653 0.977712 984 986 chr3 82337499 82339442 chr3:82337499-82339442:+:L1HS:REF 12 + L1HS REF 3prime-truncated LINC02008 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.24498 0.96768 0.844191 0.81635 0.870027 0.857848 0.087386 0.881616 0.983333 0.861961 0.791763 0.937023 985 987 chr3 82370309 82376434 chr3:82370309-82376434:-:L1PA5:REF 12 - L1PA5 REF full-length LINC02008 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.932702 0.81278 0.730947 0.678414 0.713306 0.66443 0.0114943 0.611584 0.969659 0.73545 0.589099 0.931034 986 988 chr3 84086620 84086868 chr3:84086620-84086868:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.823529 0.0901235 0.5 0.482234 0.295858 0.96875 0.0601504 0.391635 0.980344 0.534743 0.111399 0.950617 987 989 chr3 84362965 84366754 chr3:84362965-84366754:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.853968 0.479866 0.650602 0.665944 0.686364 0.990099 0.8 0.569106 0.96087 0.550562 0.666667 0.984496 988 990 chr3 85153071 85158885 chr3:85153071-85158885:+:L1PA3:REF 12 + L1PA3 REF full-length CADM2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.925441 0.878359 0.874897 0.855957 0.878285 0.944177 0.0322129 0.876661 0.969604 0.853251 0.8455 0.952059 989 991 chr3 85289930 85295940 chr3:85289930-85295940:+:L1PA2:REF 12 + L1PA2 REF full-length CADM2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.848346 0.565511 0.766754 0.727681 0.818947 0.864762 0.00168634 0.881995 0.978237 0.799564 0.774611 0.94375 990 992 chr3 85527417 85527423 chr3:85527417-85527423:+:L1HS:NONREF 8 + L1HS KNR euL1db:mrip5016,1KGP:L1_umary_LINE1_629,Philippe:EXP_ID_0815 CADM2 2102Ep,BJ,MRC5,K562,MCF7,HCT116,HEK293,H1 0.0589147 0.898897 0.823209 0.944816 0.811594 0.983234 0.935374 0.946429 991 993 chr3 85800462 85800865 chr3:85800462-85800865:-:L1PA7:REF 11 - L1PA7 REF 3prime-truncated CADM2 2102Ep,HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.866337 0.205212 0.64532 0.833333 0.690265 0.0327869 0.392 0.968085 0.601852 0.907801 0.905172 992 994 chr3 87092250 87098391 chr3:87092250-87098391:-:L1PA4:REF 1 - L1PA4 REF full-length LINC00506 MRC5 0.93617 993 995 chr3 87340526 87346504 chr3:87340526-87346504:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921151 0.798299 0.907176 0.799452 0.92054 0.843236 0.284335 0.974939 0.984301 0.732955 0.935264 0.981197 994 996 chr3 87647889 87654326 chr3:87647889-87654326:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.818182 0.017094 0.547945 0.69697 0.946667 0.909091 0.470588 0.984848 0.972973 0.69697 0.846154 0.923077 995 997 chr3 88181952 88188095 chr3:88181952-88188095:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.219512 996 998 chr3 88503101 88509122 chr3:88503101-88509122:-:L1PA2:REF 10 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.305288 0.324444 0.719512 0.76 0.0735849 0.234848 0.24186 0.95 0.773438 0.911111 997 999 chr3 88869833 88875863 chr3:88869833-88875863:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.279786 0.671337 0.933041 0.890311 0.945675 0.559876 0.0135287 0.865443 0.983373 0.881766 0.938725 0.910653 998 1000 chr3 89345615 89351640 chr3:89345615-89351640:-:L1PA2:REF 12 - L1PA2 REF full-length EPHA3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0761712 0.925067 0.946411 0.955517 0.687144 0.838897 0.0143113 0.969795 0.982376 0.941026 0.970661 0.886833 999 1001 chr3 89460825 89466856 chr3:89460825-89466856:-:L1HS:REF 12 - L1HS REF full-length EPHA3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.047105 0.874294 0.918682 0.938491 0.968995 0.815107 0.0222046 0.979644 0.982744 0.927835 0.978778 0.97479 Gardner_2017:3,Rodriguez-Martin_2020:8,Tubio_2014:1 1000 1002 chr3 89747613 89753632 chr3:89747613-89753632:+:L1PA3:REF 10 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.198068 0.0508475 0.742857 0.871636 0.475336 0.808511 0.951128 0.880952 0.801527 0.813333 1001 1003 chr3 89869044 89875069 chr3:89869044-89875069:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.827011 0.774902 0.8 0.838387 0.893898 0.684354 0.0182292 0.961412 0.96648 0.835575 0.912329 0.951909 1002 1004 chr3 89939076 89945113 chr3:89939076-89945113:-:L1PA3:REF 9 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.638783 0.271493 0.531532 0.722334 0.2 0.733871 0.0827586 0.972727 0.835052 1003 1005 chr3 89957833 89963855 chr3:89957833-89963855:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.521534 0.780756 0.807902 0.892058 0.948868 0.881559 0.00140056 0.954442 0.982793 0.887435 0.929163 0.93356 1004 1006 chr3 90104986 90111136 chr3:90104986-90111136:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923754 0.437363 0.689024 0.770149 0.918782 0.737705 0.0372671 0.93007 0.985119 0.91411 0.983936 0.947368 1005 1007 chr3 90169567 90175598 chr3:90169567-90175598:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.248055 0.744866 0.825539 0.823186 0.925729 0.662058 0.0325765 0.938185 0.979626 0.861167 0.915922 0.901487 1006 1008 chr3 91314638 91320763 chr3:91314638-91320763:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.741935 0.012285 0.194737 0.184602 0.136476 0.00963855 0.00258398 0.531802 0.855738 0.21372 0.179439 0.507895 1007 1009 chr3 93807327 93808615 chr3:93807327-93808615:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87156 0.414634 0.672598 0.694444 0.662125 0.408072 0.0162602 0.858586 0.978788 0.685606 0.80198 0.836879 1008 1010 chr3 93846770 93852898 chr3:93846770-93852898:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.687151 0.714286 0.328 0.566802 0.630952 0.131783 0.0169492 0.57971 0.951049 0.470149 0.679775 0.666667 1009 1011 chr3 93949717 93955738 chr3:93949717-93955738:+:L1PA5:REF 10 + L1PA5 REF full-length PROS1 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.6 0.605769 0.818182 0.558659 0.416667 0.535714 0.0915493 0.961538 0.568182 0.78 1010 1012 chr3 94077243 94081366 chr3:94077243-94081366:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated NSUN3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.840164 0.980488 0.958824 0.98791 0.942222 0.991667 0.844444 0.975 0.862857 0.969231 0.96 0.933333 1011 1013 chr3 94745469 94751496 chr3:94745469-94751496:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.708275 0.801444 0.622084 0.651786 0.897742 0.729927 0.0275591 0.908922 0.983114 0.666667 0.858911 0.956679 1012 1014 chr3 94836023 94842079 chr3:94836023-94842079:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.903034 0.593793 0.642054 0.692774 0.745098 0.722114 0.0204918 0.95478 0.976579 0.656467 0.405405 0.948229 1013 1015 chr3 94846027 94852063 chr3:94846027-94852063:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.702 0.69221 0.569054 0.592795 0.637597 0.729141 0.023085 0.839439 0.798394 0.687683 0.494634 0.769829 1014 1016 chr3 95059814 95065951 chr3:95059814-95065951:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918796 0.669283 0.791918 0.789351 0.899196 0.854465 0.381862 0.947154 0.985304 0.807601 0.769759 0.972345 1015 1017 chr3 95286705 95287969 chr3:95286705-95287969:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.661597 0.376812 0.626596 0.638262 0.798395 0.413121 0.00173611 0.862355 0.790989 0.568396 0.840391 0.942623 1016 1018 chr3 95657314 95663341 chr3:95657314-95663341:-:L1PA3:REF 12 - L1PA3 REF full-length MTHFD2P1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.849292 0.188755 0.574697 0.605488 0.775432 0.669364 0.00646552 0.812808 0.975132 0.596394 0.705433 0.949422 1017 1019 chr3 96090880 96097375 chr3:96090880-96097375:+:L1PA7:REF 4 + L1PA7 REF full-length HepG2,BJ,MRC5,HCT116 0.0526316 0.611111 0.296296 1.0 1018 1020 chr3 96526666 96528751 chr3:96526666-96528751:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.851852 0.216949 0.25 0.29476 0.493464 0.635514 0.0102041 0.610577 0.949541 0.340426 0.505747 0.946565 1019 1021 chr3 96936611 96942758 chr3:96936611-96942758:-:L1PA4:REF 12 - L1PA4 REF full-length EPHA6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.841424 0.65 0.716292 0.783473 0.970464 0.977578 0.00549451 0.757143 0.969152 0.778656 0.878049 0.937063 1020 1022 chr3 96979060 96985198 chr3:96979060-96985198:-:L1PA5:REF 12 - L1PA5 REF full-length EPHA6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.80814 0.357743 0.589425 0.561216 0.926829 0.899329 0.00514139 0.967677 0.952128 0.59824 0.917431 0.945607 1021 1023 chr3 97641427 97645082 chr3:97641427-97645082:+:L1PA2:REF 8 + L1PA2 REF 3prime-truncated EPHA6 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,IMR90,HEK293 0.136691 0.873333 0.785714 0.82439 0.900826 0.0338983 0.733333 0.958333 1022 1024 chr3 97904737 97910773 chr3:97904737-97910773:-:L1PA3:REF 12 - L1PA3 REF full-length CRYBG3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.18226 0.853249 0.977062 0.932849 0.110535 0.971302 0.031362 0.907352 0.976162 0.983626 0.967249 0.840045 1023 1025 chr3 98174083 98180245 chr3:98174083-98180245:+:L1PA4:REF 12 + L1PA4 REF full-length OR5H15 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.799874 0.366528 0.566922 0.472698 0.514786 0.392701 0.00754006 0.292937 0.82991 0.490544 0.463487 0.827888 1024 1026 chr3 98406586 98412727 chr3:98406586-98412727:+:L1PA4:REF 11 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.840435 0.02115 0.266723 0.420774 0.0111111 0.0376344 0.00149254 0.0782698 0.954859 0.545064 0.801214 1025 1027 chr3 99073672 99074671 chr3:99073672-99074671:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.904867 0.282828 0.797521 0.763023 0.960152 0.525862 0.00632911 0.446686 0.981211 0.923445 0.949861 0.930556 1026 1028 chr3 100667810 100668238 chr3:100667810-100668238:-:L1P3:REF 1 - L1P3 REF 3prime-truncated ADGRG7 MRC5 1.0 1027 1029 chr3 101108330 101114476 chr3:101108330-101114476:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.832624 0.0714286 0.917348 0.951542 0.888006 0.545685 0.489164 0.583867 0.91675 0.912409 0.7426 0.858509 1028 1030 chr3 101236399 101239038 chr3:101236399-101239038:+:L1PA7:REF 8 + L1PA7 REF 3prime-truncated IMPG2 2102Ep,HepG2,BJ,MRC5,HeLaS3,HCT116,IMR90,HEK293 0.979167 0.597403 0.895833 0.939252 0.701754 0.928571 0.974359 0.684211 1029 1031 chr3 101536931 101541323 chr3:101536931-101541323:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891117 0.842424 0.628125 0.843003 0.770161 0.594427 0.708197 0.769231 0.9791 0.742105 0.821138 0.955556 1030 1032 chr3 101560812 101560814 chr3:101560812-101560814:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip5074,Philippe:EXP_ID_0827 TRMT10C HCT116 0.976852 Philippe_2016:1,Rodriguez-Martin_2020:15 1031 1033 chr3 101605457 101605940 chr3:101605457-101605940:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.62069 0.506173 0.722826 0.778364 0.643836 0.840237 0.494845 0.828125 0.976744 0.843137 0.910714 0.888889 1032 1034 chr3 101735395 101739625 chr3:101735395-101739625:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated CEP97 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.888514 0.961009 0.971519 0.976422 0.980263 0.960526 0.948718 0.965517 0.976676 0.941176 0.969828 0.953704 1033 1035 chr3 101750444 101754042 chr3:101750444-101754042:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated CEP97 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919263 0.981867 0.984027 0.980309 0.972085 0.978998 0.977914 0.0382166 0.987844 0.980226 0.973928 0.984416 1034 1036 chr3 101905442 101911853 chr3:101905442-101911853:-:L1PA7:REF 1 - L1PA7 REF full-length MRC5 1.0 1035 1037 chr3 102008204 102014355 chr3:102008204-102014355:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.866397 0.769764 0.979439 0.972251 0.904025 0.960613 0.0176322 0.964218 0.95438 0.991837 0.944444 0.970588 1036 1038 chr3 102221216 102223529 chr3:102221216-102223529:-:L1P3:REF 3 - L1P3 REF 3prime-truncated HepG2,MRC5,HCT116 0.11828 0.944444 0.930556 1037 1039 chr3 102836264 102842422 chr3:102836264-102842422:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.846154 0.0300752 0.0769231 0.0629921 0.321429 0.146341 0.02 0.197802 0.71875 0.173077 0.0 0.695652 1038 1040 chr3 103220448 103226476 chr3:103220448-103226476:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.145024 0.773585 0.680779 0.711816 0.697064 0.752018 0.0130246 0.593828 0.796499 0.7 0.674322 0.825312 1039 1041 chr3 103556537 103562569 chr3:103556537-103562569:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.244486 0.791121 0.851404 0.882891 0.891688 0.858913 0.0323887 0.897436 0.940992 0.848816 0.814118 0.897924 1040 1042 chr3 105296223 105302219 chr3:105296223-105302219:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.156701 0.310937 0.93407 0.930123 0.855895 0.967552 0.0125392 0.93274 0.897601 0.872873 0.94351 0.914963 1041 1043 chr3 106665293 106671324 chr3:106665293-106671324:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.795918 0.761369 0.959041 0.961247 0.89306 0.902017 0.0122951 0.953168 0.981937 0.975275 0.96129 0.968708 1042 1044 chr3 106975444 106981476 chr3:106975444-106981476:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.372723 0.745115 0.90807 0.906135 0.750709 0.830496 0.0294562 0.929333 0.908973 0.86092 0.895465 0.905615 1043 1045 chr3 107144092 107150246 chr3:107144092-107150246:+:L1PA4:REF 12 + L1PA4 REF full-length LINC00882 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.865493 0.518854 0.804921 0.910368 0.852416 0.727128 0.19274 0.920952 0.974217 0.88228 0.916872 0.95251 1044 1046 chr3 107333744 107339866 chr3:107333744-107339866:+:L1PA3:REF 12 + L1PA3 REF full-length DUBR 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.782344 0.346918 0.696286 0.6875 0.789252 0.620818 0.244939 0.816361 0.963816 0.796748 0.890385 0.944282 1045 1047 chr3 107692204 107698221 chr3:107692204-107698221:-:L1PA3:REF 12 - L1PA3 REF full-length BBX 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.176066 0.982153 0.909145 0.966451 0.0583512 0.987542 0.165529 0.0287081 0.97946 0.878534 0.943792 0.657929 1046 1048 chr3 108369326 108375491 chr3:108369326-108375491:+:L1PA4:REF 6 + L1PA4 REF full-length HHLA2 MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.46875 0.533333 0.564103 0.671642 0.791045 0.564516 1047 1049 chr3 108749400 108755425 chr3:108749400-108755425:+:L1HS:REF 12 + L1HS REF full-length RETNLB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0525478 0.852295 0.782869 0.803715 0.915625 0.689516 0.0508982 0.90297 0.939655 0.820375 0.948837 0.825175 1048 1050 chr3 109199872 109205903 chr3:109199872-109205903:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.147574 0.870423 0.864787 0.902658 0.899415 0.677298 0.0274725 0.923401 0.976744 0.889026 0.955296 0.938838 1049 1051 chr3 109508196 109514400 chr3:109508196-109514400:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.776456 0.648299 0.706987 0.757674 0.703453 0.612798 0.158345 0.558455 0.924554 0.747175 0.564397 0.859454 1050 1052 chr3 109521768 109524160 chr3:109521768-109524160:+:L1PA5:REF 1 + L1PA5 REF 3prime-truncated MRC5 0.848485 1051 1053 chr3 109527497 109529326 chr3:109527497-109529326:-:L1PA6:REF 8 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,H1 0.848 0.428571 0.570175 0.714744 0.616667 0.276923 0.941176 1.0 1052 1054 chr3 109664743 109670946 chr3:109664743-109670946:+:L1PA6:REF 11 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.941667 0.0958084 0.447619 0.835962 0.288288 0.263158 0.0933333 0.988095 0.565217 0.188889 0.947368 1053 1055 chr3 110000000 110002500 chr3:110000000-110002500:-:L1P2:REF 4 - L1P2 REF 3prime-truncated HepG2,HEK293T,MCF7,HEK293 0.738462 0.423077 0.0380952 0.769231 1054 1056 chr3 110440086 110446113 chr3:110440086-110446113:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.37004 0.935018 0.965234 0.968577 0.756603 0.890963 0.474794 0.308802 0.984817 0.902439 0.836234 0.969248 1055 1057 chr3 110494714 110500000 chr3:110494714-110500000:+:L1P3:REF 1 + L1P3 REF 3prime-truncated MRC5 0.333333 1056 1058 chr3 110632031 110638051 chr3:110632031-110638051:-:L1PA3:REF 10 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.755245 0.637363 0.853846 0.891304 0.767442 0.593023 0.572727 0.927928 0.909091 0.778947 1057 1059 chr3 110768850 110769943 chr3:110768850-110769943:+:L1P2:REF 11 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.968421 0.947917 0.950495 0.979381 0.727273 0.2 0.347222 0.964912 0.933333 0.925926 0.973684 1058 1060 chr3 110888814 110890548 chr3:110888814-110890548:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.128192 0.888627 0.96648 0.98467 0.0196488 0.85842 0.0414508 0.928617 0.987213 0.969667 0.966447 0.892019 1059 1061 chr3 110911437 110917460 chr3:110911437-110917460:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.914314 0.82147 0.915653 0.945192 0.668966 0.558491 0.0146893 0.579824 0.970485 0.912983 0.804642 0.980603 1060 1062 chr3 111018716 111024745 chr3:111018716-111024745:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.595353 0.836281 0.857962 0.867829 0.815097 0.809935 0.0507042 0.789006 0.880286 0.882068 0.80575 0.898256 1061 1063 chr3 111556203 111562234 chr3:111556203-111562234:-:L1PA2:REF 12 - L1PA2 REF full-length CD96 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.101278 0.848375 0.907848 0.956843 0.550661 0.903323 0.0144695 0.557405 0.980798 0.955771 0.965349 0.966292 1062 1064 chr3 112211221 112217359 chr3:112211221-112217359:+:L1PA5:REF 9 + L1PA5 REF full-length SLC9C1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90 0.807229 0.0844156 0.604167 0.651769 0.55336 0.352332 0.0298507 0.203947 0.741935 1063 1065 chr3 112233483 112239593 chr3:112233483-112239593:-:L1PA5:REF 11 - L1PA5 REF full-length SLC9C1 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.89675 0.311178 0.617647 0.320574 0.434629 0.0060423 0.696262 0.727273 0.560137 0.348285 0.679104 1064 1066 chr3 112659127 112665164 chr3:112659127-112665164:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0597015 0.44376 0.971042 0.975371 0.549881 0.721761 0.00739958 0.133486 0.990402 0.881832 0.873239 0.917623 1065 1067 chr3 112724116 112730267 chr3:112724116-112730267:+:L1PA3:REF 12 + L1PA3 REF full-length LINC02042 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863905 0.666667 0.911724 0.959168 0.819927 0.648402 0.455696 0.917258 0.969298 0.905512 0.803922 0.961686 1066 1068 chr3 113366591 113372740 chr3:113366591-113372740:+:L1PA6:REF 12 + L1PA6 REF full-length CFAP44 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.907104 0.870056 0.873418 0.919847 0.940171 0.977273 0.205882 0.957983 0.987903 0.926829 0.958824 0.974026 1067 1069 chr3 113471798 113477946 chr3:113471798-113477946:+:L1PA3:REF 3 + L1PA3 REF full-length SPICE1 2102Ep,MRC5,HEK293T 0.571429 0.98913 0.703046 1068 1070 chr3 114276891 114282906 chr3:114276891-114282906:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929562 0.746341 0.921747 0.942857 0.894632 0.848011 0.185155 0.865062 0.971793 0.925684 0.937768 0.914648 1069 1071 chr3 114531689 114538145 chr3:114531689-114538145:+:L1PA7:REF 1 + L1PA7 REF full-length ZBTB20 MRC5 0.333333 1070 1072 chr3 115312305 115318470 chr3:115312305-115318470:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0898662 0.640546 0.983578 0.967045 0.723416 0.957323 0.0539715 0.375451 0.980498 0.938255 0.953125 0.972467 1071 1073 chr3 115737165 115738630 chr3:115737165-115738630:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.836299 0.957447 0.563467 0.573228 0.2589 0.451282 0.00529101 0.166667 0.978648 0.684685 0.666667 0.872549 1072 1074 chr3 116203398 116209426 chr3:116203398-116209426:-:L1PA2:REF 12 - L1PA2 REF full-length LSAMP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886512 0.710208 0.908782 0.824929 0.963956 0.948081 0.442857 0.7357 0.883693 0.967471 0.891172 0.965082 1073 1075 chr3 116359999 116366026 chr3:116359999-116366026:+:L1HS:REF 12 + L1HS REF full-length LSAMP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.128321 0.631466 0.904241 0.944209 0.921251 0.886191 0.104421 0.585024 0.871262 0.728992 0.797594 0.923358 1074 1076 chr3 116455196 116461295 chr3:116455196-116461295:+:L1PA4:REF 12 + L1PA4 REF full-length LSAMP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.838739 0.395968 0.803704 0.881238 0.852941 0.469807 0.00359712 0.426451 0.664403 0.914894 0.668993 0.950284 1075 1077 chr3 118162603 118163477 chr3:118162603-118163477:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.913725 0.650862 0.612319 0.609302 0.419689 0.584795 0.0 0.574468 0.974359 0.8 0.672727 0.928058 1076 1078 chr3 118914243 118920271 chr3:118914243-118920271:+:L1PA2:REF 12 + L1PA2 REF full-length IGSF11 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0524366 0.883553 0.855227 0.869373 0.83184 0.831201 0.383412 0.658702 0.958096 0.852359 0.967063 0.913643 1077 1079 chr3 119001470 119007490 chr3:119001470-119007490:-:L1PA2:REF 12 - L1PA2 REF full-length IGSF11 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.154842 0.921844 0.858884 0.871044 0.775856 0.83432 0.541914 0.908924 0.937223 0.707254 0.770807 0.867854 1078 1080 chr3 119045132 119051153 chr3:119045132-119051153:+:L1PA3:REF 10 + L1PA3 REF full-length IGSF11 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.658929 0.689183 0.772509 0.762111 0.773448 0.956407 0.961398 0.747562 0.85495 0.765051 1079 1081 chr3 119106586 119112745 chr3:119106586-119112745:-:L1PA3:REF 12 - L1PA3 REF full-length IGSF11 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.848404 0.447557 0.658627 0.719029 0.479558 0.333333 0.00883652 0.800712 0.913897 0.756098 0.810888 0.80429 1080 1082 chr3 119563180 119569317 chr3:119563180-119569317:-:L1PA5:REF 12 - L1PA5 REF full-length CD80 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909091 0.448684 0.814649 0.802143 0.820937 0.394256 0.481481 0.686456 0.883721 0.765873 0.842829 0.962185 1081 1083 chr3 120372615 120378640 chr3:120372615-120378640:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.219092 0.146108 0.886093 0.897051 0.373134 0.00706001 0.0249307 0.646261 0.963792 0.893074 0.947517 0.923852 1082 1084 chr3 120573021 120579186 chr3:120573021-120579186:+:L1HS:REF 11 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.935484 0.81295 0.896861 0.900925 0.924084 0.921788 0.9447 0.949555 0.866667 0.942308 0.889706 1083 1085 chr3 120973554 120979692 chr3:120973554-120979692:-:L1PA3:REF 10 - L1PA3 REF full-length STXBP5L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293,H1 0.901042 0.336634 0.603175 0.671518 0.465686 0.674157 0.394161 0.991228 0.688889 0.947917 1084 1086 chr3 121351482 121356825 chr3:121351482-121356825:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated STXBP5L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.897436 0.00884956 0.27907 0.372807 0.0660377 0.259259 0.0 0.563636 0.938144 0.365385 0.425926 0.791667 1085 1087 chr3 121386403 121392538 chr3:121386403-121392538:-:L1PA6:REF 1 - L1PA6 REF full-length STXBP5L MRC5 0.595745 1086 1088 chr3 121810991 121817438 chr3:121810991-121817438:+:L1PA8:REF 10 + L1PA8 REF full-length IQCB1 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.961538 1.0 1.0 0.969388 0.904762 1.0 0.96875 1.0 0.909091 0.916667 1087 1089 chr3 121932760 121938786 chr3:121932760-121938786:-:L1PA3:REF 6 - L1PA3 REF full-length SLC15A2 2102Ep,BJ,MRC5,HeLaS3,K562,MCF7 0.124242 0.662252 0.7339 0.263158 0.247148 0.0216216 1088 1090 chr3 122041911 122047938 chr3:122041911-122047938:-:L1PA2:REF 12 - L1PA2 REF full-length CD86 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.197897 0.652951 0.744241 0.784474 0.845668 0.701915 0.0100365 0.949734 0.96606 0.739321 0.890852 0.917503 1089 1091 chr3 122137076 122143228 chr3:122137076-122143228:-:L1PA4:REF 11 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.892405 0.450131 0.523109 0.640585 0.353141 0.335793 0.0251799 0.819936 0.548507 0.710801 0.911439 1090 1092 chr3 122732871 122739022 chr3:122732871-122739022:+:L1PA4:REF 12 + L1PA4 REF full-length HSPBAP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871002 0.882601 0.959948 0.978368 0.959163 0.00554017 0.884323 0.952782 0.944681 0.988479 0.963542 0.966316 1091 1093 chr3 123871878 123871880 chr3:123871878-123871880:+:L1HS:NONREF 12 + L1HS KNR euL1db:mrip5147,Philippe:EXP_ID_0843 MYLK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.126095 0.959563 0.986691 0.987599 0.947447 0.75237 0.158108 0.980036 0.977122 0.985507 0.969849 0.889213 Rodriguez-Martin_2020:97,Tubio_2014:40 1092 1094 chr3 125936638 125942696 chr3:125936638-125942696:+:L1PA2:REF 12 + L1PA2 REF full-length ALG1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.690661 0.817513 0.889194 0.925509 0.588179 0.833871 0.244792 0.0148515 0.938211 0.932773 0.97027 0.970252 1093 1095 chr3 126331604 126337586 chr3:126331604-126337586:+:L1PA2:REF 12 + L1PA2 REF full-length KLF15 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.681205 0.799141 0.613086 0.710714 0.610991 0.368149 0.100705 0.846535 0.706657 0.72 0.653846 0.912892 1094 1096 chr3 126801074 126807208 chr3:126801074-126807208:+:L1PA4:REF 12 + L1PA4 REF full-length CHCHD6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.934356 0.980814 0.985275 0.979103 0.97179 0.963526 0.94207 0.960181 0.980795 0.972868 0.9758 0.980884 1095 1097 chr3 131041808 131045185 chr3:131041808-131045185:+:L1P3:REF 12 + L1P3 REF 3prime-truncated NEK11 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871579 0.941252 0.955108 0.864356 0.960236 0.947917 0.517815 0.975771 0.9625 0.960177 0.949761 0.942982 1096 1098 chr3 131115989 131122113 chr3:131115989-131122113:-:L1PA5:REF 11 - L1PA5 REF full-length NEK11 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891176 0.354724 0.759563 0.5325 0.632735 0.00819672 0.84918 0.848837 0.560748 0.760518 0.918919 1097 1099 chr3 131331470 131337625 chr3:131331470-131337625:+:L1PA3:REF 12 + L1PA3 REF full-length NEK11 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.373028 0.158698 0.931422 0.929888 0.0285874 0.825411 0.248276 0.0341686 0.976271 0.877577 0.942222 0.652113 1098 1100 chr3 132118781 132118783 chr3:132118781-132118783:-:L1HS:NONREF 1 - L1HS KNR Philippe:EXP_ID_0848 HeLaS3 0.644776 1099 1101 chr3 132136909 132141753 chr3:132136909-132141753:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.266423 0.459195 0.93183 0.928543 0.866303 0.877295 0.0159933 0.935035 0.954636 0.707113 0.961337 0.636757 1100 1102 chr3 132371232 132377261 chr3:132371232-132377261:-:L1PA2:REF 12 - L1PA2 REF full-length ACPP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0801868 0.863745 0.846212 0.968287 0.0123169 0.877025 0.235463 0.940028 0.950707 0.881218 0.963147 0.811618 1101 1103 chr3 132741144 132747312 chr3:132741144-132747312:-:L1PA6:REF 12 - L1PA6 REF full-length NPHP3-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929553 0.743363 0.888386 0.92172 0.958275 0.110312 0.56 0.973333 0.949533 0.822785 0.970297 0.955026 1102 1104 chr3 132760656 132766652 chr3:132760656-132766652:-:L1PA2:REF 12 - L1PA2 REF full-length NPHP3-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.175477 0.766572 0.861251 0.868397 0.879106 0.753443 0.658339 0.895833 0.87523 0.768539 0.917615 0.924757 1103 1105 chr3 132946006 132952034 chr3:132946006-132952034:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0885767 0.904018 0.840115 0.872059 0.884737 0.803016 0.776224 0.953081 0.910853 0.865011 0.942004 0.93248 1104 1106 chr3 133000000 133005662 chr3:133000000-133005662:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.708445 0.0365374 0.475849 0.588264 0.416942 0.269276 0.422285 0.0343511 0.517406 0.573171 0.664116 0.755144 1105 1107 chr3 133310559 133312866 chr3:133310559-133312866:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated TMEM108 MRC5 0.35 1106 1108 chr3 133681221 133687356 chr3:133681221-133687356:+:L1PA5:REF 12 + L1PA5 REF full-length TF 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.884848 0.957672 0.727273 0.679764 0.758333 0.15 0.0 0.907692 0.96129 0.742857 0.91875 0.98 1107 1109 chr3 133723674 133729811 chr3:133723674-133729811:-:L1PA3:REF 12 - L1PA3 REF full-length TF 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.797664 0.786351 0.651676 0.559972 0.411537 0.354227 0.124597 0.798942 0.919654 0.643997 0.651917 0.866562 1108 1110 chr3 134100582 134102200 chr3:134100582-134102200:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919765 0.21466 0.889119 0.880525 0.760812 0.941781 0.00735294 0.949864 0.97076 0.921839 0.926471 0.960069 1109 1111 chr3 135002247 135005976 chr3:135002247-135005976:-:L1HS:REF 5 - L1HS REF 3prime-truncated EPHB1 2102Ep,BJ,MRC5,HEK293T,HCT116 0.89781 0.959596 0.794702 0.709091 0.88024 1110 1112 chr3 135025209 135031249 chr3:135025209-135031249:-:L1PA3:REF 12 - L1PA3 REF full-length EPHB1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.136659 0.450787 0.291117 0.18006 0.405229 0.552632 0.156371 0.758186 0.660043 0.154074 0.809145 0.280272 1111 1113 chr3 135252214 135258230 chr3:135252214-135258230:-:L1PA2:REF 12 - L1PA2 REF full-length EPHB1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.62639 0.481876 0.71065 0.672669 0.457254 0.395987 0.00559284 0.734904 0.741507 0.62906 0.922027 0.812102 1112 1114 chr3 135439148 135439860 chr3:135439148-135439860:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0538058 0.132653 0.561538 0.401947 0.0433121 0.086758 0.00330579 0.00721154 0.547097 0.487654 0.77102 0.544393 1113 1115 chr3 135584725 135590755 chr3:135584725-135590755:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.226365 0.577023 0.748945 0.736634 0.619104 0.475 0.558696 0.895404 0.789536 0.766871 0.852535 0.920918 1114 1116 chr3 135658603 135664636 chr3:135658603-135664636:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0346145 0.919788 0.847006 0.85752 0.808295 0.811361 0.320978 0.955179 0.928604 0.858974 0.966418 0.840496 1115 1117 chr3 136224307 136230440 chr3:136224307-136230440:+:L1PA3:REF 4 + L1PA3 REF full-length 2102Ep,MRC5,HEK293T,HCT116 0.826531 0.948052 0.910714 0.97619 1116 1118 chr3 136479056 136485103 chr3:136479056-136485103:-:L1HS:REF 12 - L1HS REF full-length STAG1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.31813 0.972222 0.97928 0.9875 0.98498 0.977749 0.935135 0.974925 0.975553 0.979899 0.956629 0.964 1117 1119 chr3 136963693 136969736 chr3:136963693-136969736:-:L1HS:REF 12 - L1HS REF full-length IL20RB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0579417 0.950152 0.939791 0.982977 0.970284 0.986264 0.94596 0.969128 0.979959 0.955189 0.97699 0.833968 1118 1120 chr3 137211031 137217172 chr3:137211031-137217172:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885167 0.581517 0.646925 0.727626 0.4125 0.296684 0.00838926 0.657277 0.615128 0.739958 0.811066 0.907563 1119 1121 chr3 137372109 137377745 chr3:137372109-137377745:-:L1PA7:REF 7 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.708333 0.0 0.192308 0.27619 0.0 0.0263158 0.227273 1120 1122 chr3 137412472 137418746 chr3:137412472-137418746:+:L1PA4:REF 10 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.630952 0.292453 0.689076 0.584416 0.268293 0.0970874 0.213115 0.647059 0.557377 0.723684 1121 1123 chr3 137430506 137436694 chr3:137430506-137436694:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.00130208 1122 1124 chr3 137633714 137639732 chr3:137633714-137639732:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.426877 0.716593 0.663291 0.705761 0.555809 0.56658 0.0 0.589226 0.769355 0.751825 0.737913 0.866029 1123 1125 chr3 137653910 137660442 chr3:137653910-137660442:+:L1PA7:REF 2 + L1PA7 REF full-length 2102Ep,MRC5 0.904 0.653333 1124 1126 chr3 137660583 137666719 chr3:137660583-137666719:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.870793 0.322495 0.611511 0.612876 0.301802 0.392368 0.0177891 0.393608 0.346023 0.510379 0.551724 0.923077 1125 1127 chr3 137679055 137679885 chr3:137679055-137679885:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87037 0.222 0.550725 0.627877 0.411111 0.268817 0.0273224 0.562249 0.596899 0.472574 0.807407 0.919753 1126 1128 chr3 137896608 137902264 chr3:137896608-137902264:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.82439 0.0657371 0.255965 0.225725 0.0416667 0.0353698 0.0116279 0.211921 0.186583 0.282051 0.437659 0.846995 1127 1129 chr3 139325613 139325615 chr3:139325613-139325615:+:L1HS:NONREF 4 + L1HS KNR euL1db:mrip5209,1KGP:L1_umary_LINE1_695,Philippe:EXP_ID_0854 2102Ep,MRC5,HEK293T,HEK293 0.240409 0.878031 0.811024 0.841603 1128 1130 chr3 139404562 139410725 chr3:139404562-139410725:+:L1PA6:REF 9 + L1PA6 REF full-length LOC100507291 HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.205128 0.366667 0.283951 0.285714 0.0 0.0526316 0.678571 0.35 0.45 1129 1131 chr3 139590956 139596035 chr3:139590956-139596035:+:L1HS:REF 12 + L1HS REF 3prime-truncated NMNAT3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.108787 0.526731 0.845334 0.844049 0.939626 0.792154 0.152486 0.973477 0.978844 0.873087 0.980307 0.926126 1130 1132 chr3 139877463 139883576 chr3:139877463-139883576:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.81694 0.0290102 0.256338 0.252392 0.044843 0.052 0.00307692 0.760479 0.224206 0.290749 0.476071 0.863905 1131 1133 chr3 140479951 140486093 chr3:140479951-140486093:-:L1PA4:REF 12 - L1PA4 REF full-length CLSTN2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.865052 0.420112 0.677223 0.570423 0.565289 0.223022 0.00181818 0.941292 0.625162 0.588556 0.768953 0.964706 1132 1134 chr3 140797237 140803746 chr3:140797237-140803746:-:L1PA7:REF 10 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.904762 0.142857 0.4 0.255102 0.0789474 0.0909091 0.0 0.184211 0.05 0.923077 1133 1135 chr3 140987571 140993670 chr3:140987571-140993670:+:L1PA5:REF 12 + L1PA5 REF full-length SLC25A36 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.931298 0.79803 0.845103 0.842399 0.911017 0.718519 0.0247253 0.947236 0.973415 0.848485 0.958637 0.966346 1134 1136 chr3 141135363 141141479 chr3:141135363-141141479:-:L1PA4:REF 12 - L1PA4 REF full-length SPSB4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.846059 0.761749 0.719451 0.764348 0.789079 0.630319 0.00660066 0.948645 0.880952 0.735556 0.86221 0.930939 1135 1137 chr3 141757129 141763153 chr3:141757129-141763153:-:L1PA2:REF 12 - L1PA2 REF full-length RNF7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.279928 0.816159 0.966761 0.975878 0.950666 0.911546 0.901752 0.474494 0.98391 0.969256 0.976419 0.903803 1136 1138 chr3 142290203 142296232 chr3:142290203-142296232:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.942584 0.838006 0.875817 0.956848 0.874233 0.939394 0.821429 0.990826 0.961326 0.897436 0.920455 1137 1139 chr3 142475105 142481234 chr3:142475105-142481234:-:L1PA5:REF 12 - L1PA5 REF full-length ATR 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.926027 0.976744 0.962293 0.974301 0.959763 0.977778 0.981697 0.985075 0.981742 0.968531 0.992248 0.986159 1138 1140 chr3 143402915 143402917 chr3:143402915-143402917:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip5216,Philippe:EXP_ID_0855 SLC9A9 MRC5 0.873998 1139 1141 chr3 143662333 143668488 chr3:143662333-143668488:+:L1PA5:REF 12 + L1PA5 REF full-length SLC9A9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921944 0.337553 0.706708 0.915527 0.914894 0.135359 0.0173228 0.648506 0.955178 0.805897 0.87909 0.961194 1140 1142 chr3 145252617 145258622 chr3:145252617-145258622:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.658169 0.680333 0.817025 0.810226 0.607388 0.492405 0.00718133 0.915836 0.970614 0.8 0.781312 0.874263 1141 1143 chr3 145877907 145880135 chr3:145877907-145880135:-:L1PA8:REF 2 - L1PA8 REF 3prime-truncated MRC5,HCT116 0.47619 1.0 1142 1144 chr3 145917900 145924052 chr3:145917900-145924052:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880769 0.346275 0.59434 0.720063 0.790289 0.236805 0.0193322 0.512227 0.96319 0.340116 0.569116 0.721137 1143 1145 chr3 145927778 145933791 chr3:145927778-145933791:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.458984 0.422928 0.80779 0.805341 0.765356 0.280028 0.00204638 0.755484 0.936601 0.730512 0.639368 0.923155 1144 1146 chr3 146285252 146294041 chr3:146285252-146294041:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890274 0.182692 0.903084 0.910667 0.899818 0.908854 0.010274 0.869128 0.957333 0.914894 0.773585 0.922414 1145 1147 chr3 146940674 146946795 chr3:146940674-146946795:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868499 0.288 0.881038 0.812289 0.690272 0.618519 0.0127714 0.611307 0.947739 0.760073 0.593849 0.929757 1146 1148 chr3 147315153 147317763 chr3:147315153-147317763:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.666667 0.194203 0.783784 0.677279 0.565217 0.268519 0.0194175 0.152632 0.945652 0.783951 0.588235 0.954198 1147 1149 chr3 147593845 147599956 chr3:147593845-147599956:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.799087 0.165242 0.520599 0.558984 0.734848 0.693467 0.00961538 0.608491 0.923077 0.510067 0.617424 0.857143 1148 1150 chr3 148780637 148786767 chr3:148780637-148786767:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.859296 0.415541 0.497608 0.595843 0.881633 0.610778 0.0121951 0.813953 0.975369 0.733333 0.874346 0.966387 1149 1151 chr3 151241772 151247772 chr3:151241772-151247772:+:L1PA2:REF 11 + L1PA2 REF full-length MED12L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.753968 0.964789 0.941558 0.980973 0.99635 0.893939 0.0545455 0.961832 0.956081 0.984772 0.981481 1150 1152 chr3 151430754 151430756 chr3:151430754-151430756:-:L1HS:NONREF 6 - L1HS KNR euL1db:mrip5243,1KGP:L1_umary_LINE1_714,Philippe:EXP_ID_0858 MED12L 2102Ep,BJ,MRC5,HeLaS3,HCT116,IMR90 0.296471 0.843458 0.847401 0.780465 0.845462 0.818533 Rodriguez-Martin_2020:10,Tubio_2014:3 1151 1153 chr3 151509490 151515631 chr3:151509490-151515631:+:L1PA4:REF 2 + L1PA4 REF full-length MRC5,HEK293 0.92735 0.894737 1152 1154 chr3 151884685 151887320 chr3:151884685-151887320:+:L1P3:REF 8 + L1P3 REF 3prime-truncated AADACL2-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,IMR90,HEK293 0.921053 0.12037 0.954545 0.841202 0.887755 0.986486 0.972973 0.970588 1153 1155 chr3 151970297 151970299 chr3:151970297-151970299:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip5246,1KGP:L1_umary_LINE1_715,Philippe:EXP_ID_0859 HepG2,H1 0.901152 0.903743 Beck_2010:0.0 1154 1156 chr3 152419281 152419680 chr3:152419281-152419680:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated MBNL1 MRC5 0.0 1155 1157 chr3 153235756 153241782 chr3:153235756-153241782:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.610714 0.726396 0.978472 0.971564 0.917963 0.800607 0.819277 0.95332 0.956019 0.984472 0.938492 0.974865 1156 1158 chr3 153506403 153512405 chr3:153506403-153512405:+:L1PA2:REF 12 + L1PA2 REF full-length LINC02006 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.145145 0.686702 0.798485 0.787961 0.758204 0.689503 0.0879495 0.155601 0.810776 0.675131 0.731697 0.793266 1157 1159 chr3 153583994 153587712 chr3:153583994-153587712:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated LINC02006 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902941 0.418288 0.810526 0.737047 0.778313 0.176829 0.0241692 0.908451 0.984 0.740741 0.75 0.956522 1158 1160 chr3 153796804 153802956 chr3:153796804-153802956:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880448 0.739671 0.693811 0.74505 0.932679 0.418521 0.0321127 0.509514 0.831889 0.711982 0.832288 0.95615 1159 1161 chr3 153823343 153825546 chr3:153823343-153825546:+:L1P1:REF 2 + L1P1 REF 3prime-truncated MRC5,HCT116 0.608939 0.815385 1160 1162 chr3 153983402 153989527 chr3:153983402-153989527:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.660668 0.276402 0.348249 0.646302 0.74954 0.214286 0.004914 0.766467 0.774554 0.61413 0.693478 0.943463 1161 1163 chr3 154619379 154623868 chr3:154619379-154623868:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.892691 0.350667 0.786517 0.828444 0.848527 0.4662 0.0140281 0.802875 0.982222 0.690554 0.884972 0.900474 1162 1164 chr3 154819995 154826090 chr3:154819995-154826090:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.789216 0.0183824 0.652361 0.598086 0.363636 0.0310559 0.0188679 0.782123 0.898305 0.67 0.31441 0.813559 1163 1165 chr3 155119416 155125444 chr3:155119416-155125444:-:L1PA2:REF 10 - L1PA2 REF full-length MME 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.186981 0.914696 0.957547 0.964097 0.306931 0.417819 0.894207 0.744152 0.931232 0.940758 1164 1166 chr3 155469062 155475088 chr3:155469062-155475088:+:L1PA2:REF 12 + L1PA2 REF full-length PLCH1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.634278 0.912526 0.911488 0.943371 0.945073 0.73572 0.353079 0.971077 0.940098 0.857301 0.957447 0.954407 1165 1167 chr3 155541893 155548049 chr3:155541893-155548049:+:L1PA3:REF 12 + L1PA3 REF full-length PLCH1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.834586 0.892291 0.751408 0.802103 0.844699 0.689453 0.066874 0.862536 0.881579 0.789322 0.809854 0.855072 1166 1168 chr3 156000000 156004549 chr3:156000000-156004549:-:L1P3:REF 12 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905376 0.935065 0.861979 0.876953 0.97 0.714667 0.0107914 0.928889 0.958333 0.813158 0.969697 0.964045 1167 1169 chr3 156278973 156284990 chr3:156278973-156284990:-:L1PA2:REF 12 - L1PA2 REF full-length KCNAB1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.231579 0.89011 0.935644 0.951923 0.964115 0.82199 0.0930233 0.988889 0.919732 0.909605 0.966667 0.984293 1168 1170 chr3 157340046 157346169 chr3:157340046-157346169:+:L1PA5:REF 12 + L1PA5 REF full-length VEPH1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.938389 0.764228 0.977477 0.92423 0.861204 0.811395 0.150558 0.845703 0.81182 0.958084 0.839851 0.948052 1169 1171 chr3 157685205 157691319 chr3:157685205-157691319:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.818425 0.333675 0.839332 0.784357 0.915212 0.37386 0.0106667 0.709064 0.896088 0.740984 0.826196 0.79918 1170 1172 chr3 157724697 157730723 chr3:157724697-157730723:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.149235 0.644377 0.851705 0.757524 0.894057 0.684211 0.0336943 0.866348 0.970226 0.823821 0.910822 0.908316 1171 1173 chr3 157879333 157885499 chr3:157879333-157885499:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.792952 0.658037 0.730914 0.703614 0.715983 0.269481 0.0269815 0.756554 0.88503 0.709677 0.799735 0.763158 1172 1174 chr3 158019676 158025704 chr3:158019676-158025704:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.203574 0.537433 0.8671 0.789991 0.891892 0.746371 0.210196 0.875453 0.974684 0.816986 0.857656 0.874693 1173 1175 chr3 158324235 158330363 chr3:158324235-158330363:-:L1PA5:REF 11 - L1PA5 REF full-length RSRC1 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.746032 0.9615 0.656863 0.910675 0.948195 0.894879 0.358382 0.97157 0.678959 0.948276 0.690021 1174 1176 chr3 158511108 158517123 chr3:158511108-158517123:-:L1PA3:REF 11 - L1PA3 REF full-length RSRC1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.801136 0.883721 0.911392 0.968317 0.957816 0.883333 0.913514 0.866142 0.884956 0.963918 0.983957 1175 1177 chr3 158634523 158640540 chr3:158634523-158640540:+:L1PA2:REF 12 + L1PA2 REF full-length GFM1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.200344 0.393836 0.461857 0.60871 0.845986 0.693795 0.668634 0.822795 0.935935 0.756703 0.838188 0.582624 1176 1178 chr3 159095379 159101394 chr3:159095379-159101394:-:L1HS:REF 12 - L1HS REF full-length IQCJ 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.173307 0.82699 0.858182 0.856512 0.811429 0.699029 0.0133511 0.891784 0.982346 0.84265 0.951981 0.917031 1177 1179 chr3 159392310 159398352 chr3:159392310-159398352:-:L1PA3:REF 12 - L1PA3 REF full-length IQCJ-SCHIP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.813514 0.440273 0.657559 0.58 0.434095 0.339223 0.0350877 0.754098 0.937086 0.646552 0.689655 0.921788 1178 1180 chr3 159505478 159511616 chr3:159505478-159511616:-:L1PA5:REF 12 - L1PA5 REF full-length IQCJ-SCHIP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.819672 0.49497 0.797315 0.626909 0.62622 0.347594 0.0122511 0.644195 0.946524 0.669211 0.748626 0.934932 1179 1181 chr3 161706794 161713195 chr3:161706794-161713195:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.666667 0.075 0.142857 0.0283019 0.857143 0.0384615 0.0 0.823529 0.916667 0.0 0.0 0.842105 1180 1182 chr3 162405866 162411893 chr3:162405866-162411893:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.131448 0.81822 0.889745 0.869771 0.141725 0.631181 0.00921883 0.464554 0.936052 0.8966 0.776147 0.877382 1181 1183 chr3 162966028 162966314 chr3:162966028-162966314:+:L1PA7:REF 3 + L1PA7 REF 3prime-truncated MRC5,HeLaS3,HEK293 0.631579 0.372549 0.2875 1182 1184 chr3 163236941 163242962 chr3:163236941-163242962:+:L1HS:REF 12 + L1HS REF full-length LINC01192 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0902326 0.590723 0.758972 0.619551 0.450801 0.619808 0.0164993 0.840085 0.905281 0.673913 0.637691 0.740127 1183 1185 chr3 164291525 164296426 chr3:164291525-164296426:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.447867 0.895748 0.846034 0.888372 0.933426 0.852018 0.190361 0.967298 0.981742 0.848138 0.873484 0.95671 1184 1186 chr3 164786818 164788008 chr3:164786818-164788008:+:L1P1:REF 12 + L1P1 REF 3prime-truncated LINC01324 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.814815 0.519298 0.439532 0.651113 0.790257 0.68431 0.00639659 0.762089 0.964392 0.547855 0.54908 0.925714 1185 1187 chr3 165572331 165578354 chr3:165572331-165578354:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0662188 0.579495 0.672679 0.764117 0.737071 0.0201772 0.72115 0.977382 0.785098 0.791469 0.940588 1186 1188 chr3 165655169 165657114 chr3:165655169-165657114:+:L1P2:REF 10 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.736842 0.197531 0.224138 0.274286 0.648649 0.223881 0.0 0.342105 0.736842 0.393443 1187 1189 chr3 166021102 166027124 chr3:166021102-166027124:-:L1PA3:REF 9 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.818792 0.666667 0.64 0.782692 0.69 0.861111 0.88 0.926316 0.726667 1188 1190 chr3 166617451 166623581 chr3:166617451-166623581:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.760417 0.0171821 0.471154 0.553672 0.540773 0.792453 0.0 0.783333 0.99435 0.656489 0.276382 0.979167 1189 1191 chr3 167129352 167135528 chr3:167129352-167135528:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.869328 0.402935 0.539024 0.594879 0.860123 0.5 0.00828157 0.660072 0.980027 0.613527 0.629442 0.929379 1190 1192 chr3 167275267 167281266 chr3:167275267-167281266:+:L1PA3:REF 11 + L1PA3 REF full-length ZBBX 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.936027 0.831731 0.728873 0.801296 0.902954 0.759197 0.0363636 0.861905 0.963333 0.817778 0.806691 1191 1193 chr3 168128296 168134440 chr3:168128296-168134440:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.846154 0.0738255 0.481633 0.741379 0.772189 0.198864 0.469388 0.716578 0.939759 0.515873 0.732794 0.83871 1192 1194 chr3 168772345 168772668 chr3:168772345-168772668:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated EGFEM1P 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.89458 0.0664474 0.658094 0.905847 0.695671 0.19983 0.0168841 0.0915698 0.721264 0.826829 0.803233 0.951673 1193 1195 chr3 169413059 169413467 chr3:169413059-169413467:+:L1P3:REF 11 + L1P3 REF 3prime-truncated MECOM 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.919355 0.110294 0.15873 0.851485 0.958763 0.815217 0.785714 0.620155 0.736842 0.958333 0.909091 1194 1196 chr3 169552175 169552177 chr3:169552175-169552177:+:L1HS:NONREF 5 + L1HS KNR euL1db:mrip5311,Philippe:EXP_ID_0872 MECOM BJ,HEK293T,MCF7,HCT116,HEK293 0.727183 0.899712 0.912482 0.785669 0.904269 1195 1197 chr3 169567925 169568732 chr3:169567925-169568732:+:L1PA7:REF 6 + L1PA7 REF 3prime-truncated MECOM HepG2,BJ,MRC5,HeLaS3,K562,HCT116 0.660714 0.291667 0.596685 0.863636 0.0 0.454545 1196 1198 chr3 169679487 169685517 chr3:169679487-169685517:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0964513 0.940631 0.827287 0.950372 0.933646 0.8867 0.388839 0.907871 0.928927 0.917004 0.922727 0.854264 1197 1199 chr3 170662387 170668526 chr3:170662387-170668526:-:L1PA4:REF 12 - L1PA4 REF full-length SLC7A14-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.947115 0.57345 0.894057 0.942308 0.681989 0.613772 0.7851 0.955743 0.9625 0.941392 0.881466 0.966543 1198 1200 chr3 170878556 170884584 chr3:170878556-170884584:-:L1PA2:REF 5 - L1PA2 REF full-length EIF5A2 2102Ep,HepG2,HEK293T,K562,MCF7 0.114286 0.0402685 0.142857 0.0185185 0.11976 1199 1201 chr3 170932917 170939072 chr3:170932917-170939072:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.876448 0.706154 0.79878 0.875817 0.734255 0.510067 0.143284 0.930736 0.971108 0.868347 0.833333 0.930502 1200 1202 chr3 173381849 173388281 chr3:173381849-173388281:+:L1PA7:REF 2 + L1PA7 REF full-length NLGN1 MRC5,HEK293 0.678571 0.764706 1201 1203 chr3 174259685 174265694 chr3:174259685-174265694:-:L1PA2:REF 12 - L1PA2 REF full-length NLGN1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.142017 0.508235 0.97417 0.970703 0.961145 0.724138 0.0155172 0.907336 0.926829 0.990909 0.973872 0.936441 1202 1204 chr3 174605174 174611325 chr3:174605174-174611325:+:L1PA3:REF 8 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90 0.82197 0.671642 0.911111 0.939922 0.861111 0.52349 0.953668 0.956835 1203 1205 chr3 175781710 175787737 chr3:175781710-175787737:-:L1PA2:REF 12 - L1PA2 REF full-length NAALADL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.126968 0.836299 0.965835 0.977144 0.940459 0.803536 0.0287556 0.980609 0.979583 0.969841 0.928068 0.957022 1204 1206 chr3 176016123 176022184 chr3:176016123-176022184:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.438086 0.557888 0.884494 0.870831 0.0421512 0.571138 0.025974 0.87395 0.903697 0.923203 0.709917 0.946237 1205 1207 chr3 176705531 176711710 chr3:176705531-176711710:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.876047 0.607323 0.648069 0.702486 0.68099 0.329513 0.010101 0.621269 0.979592 0.608955 0.649452 0.93586 1206 1208 chr3 177388770 177394751 chr3:177388770-177394751:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.0994475 0.915385 0.936027 0.943089 0.0182927 0.47482 0.905579 0.571823 0.996296 0.846154 0.944056 1207 1209 chr3 177659339 177665319 chr3:177659339-177665319:-:L1PA4:REF 11 - L1PA4 REF full-length LINC00578 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90099 0.874776 0.930113 0.965324 0.932796 0.82755 0.120287 0.017425 0.97527 0.945878 0.920805 1208 1210 chr3 178859948 178865979 chr3:178859948-178865979:+:L1PA2:REF 12 + L1PA2 REF full-length KCNMB2-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.125863 0.553333 0.763514 0.943387 0.0587838 0.406074 0.00950119 0.193548 0.00563607 0.758838 0.808052 0.88755 1209 1211 chr3 179126722 179132866 chr3:179126722-179132866:-:L1PA3:REF 8 - L1PA3 REF full-length LOC101928739 2102Ep,HepG2,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.902778 0.182292 0.891008 0.804598 0.0172414 0.903061 0.88 0.866667 1210 1212 chr3 180367353 180373522 chr3:180367353-180373522:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.805755 0.0454545 0.475806 0.515599 0.1 0.154362 0.00877193 0.787097 0.626316 0.744828 0.195767 0.963636 1211 1213 chr3 180448471 180452905 chr3:180448471-180452905:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.849558 0.774262 0.737832 0.754098 0.609267 0.587678 0.0075188 0.932374 0.84497 0.879195 0.775749 0.924208 1212 1214 chr3 181041413 181046904 chr3:181041413-181046904:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated SOX2-OT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.875445 0.454225 0.726644 0.805988 0.847561 0.419118 0.011236 0.56875 0.939759 0.826087 0.721429 0.974138 1213 1215 chr3 182426092 182432110 chr3:182426092-182432110:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.128469 0.811973 0.752671 0.745925 0.198817 0.696341 0.148184 0.0965147 0.980083 0.827372 0.943235 0.898279 1214 1216 chr3 186654351 186654353 chr3:186654351-186654353:+:L1HS:NONREF 3 + L1HS KNR euL1db:mrip5357,1KGP:L1_umary_LINE1_761,Philippe:EXP_ID_0882 FETUB 2102Ep,BJ,MRC5 0.428571 0.916168 0.911392 Rodriguez-Martin_2020:22 1215 1217 chr3 187052299 187058423 chr3:187052299-187058423:-:L1PA6:REF 12 - L1PA6 REF full-length ST6GAL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.808072 0.983284 0.720655 0.846652 0.956458 0.65312 0.975309 0.969828 0.891667 0.8816 0.919708 0.898848 1216 1218 chr3 187412123 187418152 chr3:187412123-187418152:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0516129 0.25777 0.884283 0.822261 0.0324846 0.759207 0.0 0.293381 0.273973 0.73913 0.85241 0.730132 1217 1219 chr3 187512728 187514886 chr3:187512728-187514886:+:L1P2:REF 10 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.722222 0.142857 0.636364 0.191176 0.633333 0.0 0.923077 0.111111 0.28125 0.645161 1218 1220 chr3 187862480 187868516 chr3:187862480-187868516:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0732258 0.954422 0.775624 0.977099 0.950939 0.968095 0.217444 0.498087 0.984679 0.939196 0.968852 0.859955 1219 1221 chr3 187890220 187896214 chr3:187890220-187896214:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0665742 0.422356 0.959054 0.963192 0.640784 0.955571 0.0124252 0.834917 0.0245207 0.940601 0.938955 0.832916 1220 1222 chr3 188372709 188378861 chr3:188372709-188378861:-:L1PA4:REF 12 - L1PA4 REF full-length LPP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.933998 0.966781 0.96893 0.985133 0.953947 0.979695 0.00981997 0.962547 0.973013 0.989228 0.962396 0.967005 1221 1223 chr3 190964647 190965526 chr3:190964647-190965526:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.430962 0.670927 0.802111 0.926636 0.956731 0.929508 0.0384615 0.925926 0.981659 0.848907 0.963066 0.645062 1222 1224 chr3 192149315 192155328 chr3:192149315-192155328:-:L1PA2:REF 10 - L1PA2 REF full-length FGF12 HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.336583 0.0734127 0.00435323 0.478398 0.00687285 0.0126796 0.492537 0.114899 0.0454133 0.468198 1223 1225 chr3 192739213 192745242 chr3:192739213-192745242:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0664488 0.79677 0.679721 0.808867 0.826454 0.63468 0.00896414 0.844467 0.896124 0.791897 0.899819 0.911504 1224 1226 chr3 192961457 192965642 chr3:192961457-192965642:-:L1PA3:REF 11 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.850719 0.431833 0.907246 0.840386 0.516285 0.0125786 0.204738 0.974446 0.923538 0.967538 0.971935 1225 1227 chr3 193179387 193185025 chr3:193179387-193185025:+:L1PA6:REF 1 + L1PA6 REF 3prime-truncated MRC5 0.273224 1226 1228 chr3 195087672 195093677 chr3:195087672-195093677:+:L1PA2:REF 12 + L1PA2 REF full-length XXYLT1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.285486 0.969377 0.762069 0.901835 0.820465 0.987583 0.866979 0.969231 0.977011 0.781997 0.975227 0.35214 1227 1229 chr4 4953897 4959919 chr4:4953897-4959919:-:L1PA2:REF 12 - L1PA2 REF full-length LOC101928306 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.058692 0.826105 0.834361 0.833775 0.711931 0.871465 0.0328667 0.983631 0.973602 0.912859 0.960028 0.892546 1228 1230 chr4 5241574 5247720 chr4:5241574-5247720:-:L1PA4:REF 12 - L1PA4 REF full-length STK32B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.857271 0.60687 0.91323 0.970197 0.288544 0.411192 0.00816327 0.52649 0.732407 0.858757 0.868831 0.943243 1229 1231 chr4 5438601 5444628 chr4:5438601-5444628:-:L1PA2:REF 12 - L1PA2 REF full-length STK32B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.199197 0.802672 0.95189 0.92954 0.616482 0.692308 0.0157109 0.663706 0.833333 0.899254 0.926653 0.833034 1230 1232 chr4 5490577 5496698 chr4:5490577-5496698:-:L1PA3:REF 12 - L1PA3 REF full-length STK32B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.928652 0.370027 0.803922 0.960486 0.387652 0.408108 0.00768386 0.936508 0.707661 0.900524 0.852437 0.951271 1231 1233 chr4 5518180 5523974 chr4:5518180-5523974:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated LINC01587 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.762767 0.673522 0.969601 0.972851 0.652697 0.752475 0.0483986 0.00954329 0.882784 0.973238 0.960784 0.966338 1232 1234 chr4 5593579 5599733 chr4:5593579-5599733:+:L1PA3:REF 9 + L1PA3 REF full-length EVC2 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.965066 0.691892 0.97619 0.964083 0.428571 0.867347 0.729412 0.922481 0.858586 1233 1235 chr4 5761914 5767928 chr4:5761914-5767928:-:L1PA3:REF 12 - L1PA3 REF full-length EVC 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.724593 0.931365 0.96994 0.977115 0.966583 0.855148 0.260191 0.84022 0.825095 0.921053 0.96956 0.923944 1234 1236 chr4 10631053 10631055 chr4:10631053-10631055:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip5406,1KGP:L1_umary_LINE1_777,Philippe:EXP_ID_0891 CLNK MRC5 0.939585 Rodriguez-Martin_2020:7 1235 1237 chr4 10775393 10781420 chr4:10775393-10781420:-:L1PA2:REF 9 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293 0.9125 0.768116 0.90404 0.945312 0.847926 0.00862069 0.94359 0.878049 0.911565 1236 1238 chr4 10824426 10829322 chr4:10824426-10829322:-:L1PA2:REF 1 - L1PA2 REF 3prime-truncated MCF7 0.778761 1237 1239 chr4 11060915 11066938 chr4:11060915-11066938:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0730337 0.865988 0.847222 0.867071 0.359406 0.75 0.0108303 0.700441 0.982162 0.798595 0.966057 0.392936 1238 1240 chr4 11143617 11149645 chr4:11143617-11149645:-:L1PA3:REF 1 - L1PA3 REF full-length MRC5 0.845528 1239 1241 chr4 11235217 11241254 chr4:11235217-11241254:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.228758 0.647569 0.715663 0.685053 0.548134 0.545833 0.0253165 0.6875 0.834215 0.724062 0.834606 0.726087 1240 1242 chr4 11378740 11384770 chr4:11378740-11384770:-:L1PA2:REF 9 - L1PA2 REF full-length HS3ST1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.669565 0.75 0.833333 0.845477 0.736626 0.886905 0.816667 0.980609 0.893204 1241 1243 chr4 11557447 11563586 chr4:11557447-11563586:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.938462 0.379747 0.722892 0.905512 0.405797 0.916667 0.0681818 0.7 0.988889 0.887097 0.876712 1242 1244 chr4 11578358 11583517 chr4:11578358-11583517:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890029 0.381425 0.53644 0.922804 0.238335 0.942786 0.015748 0.495495 0.972569 0.837037 0.748547 0.950292 1243 1245 chr4 11792760 11798752 chr4:11792760-11798752:+:L1PA2:REF 6 + L1PA2 REF full-length HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.5625 0.4 0.696246 0.297297 0.954545 0.715909 1244 1246 chr4 12089981 12096125 chr4:12089981-12096125:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923077 0.724245 0.787957 0.83363 0.512574 0.716595 0.0273876 0.365874 0.965632 0.770048 0.695187 0.960536 1245 1247 chr4 12334559 12340607 chr4:12334559-12340607:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.843718 0.621096 0.691021 0.71474 0.333333 0.421505 0.0532319 0.407563 0.941849 0.734127 0.595989 0.933206 1246 1248 chr4 12461348 12467472 chr4:12461348-12467472:+:L1PA4:REF 11 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.836538 0.649266 0.424034 0.442284 0.0426439 0.0777096 0.00977995 0.185792 0.962062 0.406297 0.945545 1247 1249 chr4 12748272 12754295 chr4:12748272-12754295:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90762 0.616658 0.656958 0.635889 0.246769 0.277852 0.017138 0.830309 0.973469 0.57284 0.646072 0.942895 1248 1250 chr4 12903431 12909456 chr4:12903431-12909456:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.26981 0.834947 0.605769 0.585822 0.592629 0.457171 0.0110917 0.880935 0.873041 0.714443 0.657525 0.727011 1249 1251 chr4 13664471 13665255 chr4:13664471-13665255:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated LINC01182 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.852941 0.655955 0.949275 0.912033 0.5 0.798319 0.217778 0.839623 0.869732 0.88 0.774038 0.915612 1250 1252 chr4 13798977 13800320 chr4:13798977-13800320:+:L1PA3:REF 6 + L1PA3 REF 3prime-truncated LINC01182 2102Ep,HepG2,BJ,MRC5,MCF7,HCT116 0.806122 0.278912 0.698795 0.840816 0.0857143 0.505495 1251 1253 chr4 14009454 14015486 chr4:14009454-14015486:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.616715 0.828587 0.920165 0.923013 0.42522 0.767908 0.0292237 0.854118 0.817204 0.88601 0.733583 0.943066 1252 1254 chr4 14207099 14213244 chr4:14207099-14213244:-:L1PA3:REF 5 - L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HCT116 0.902439 0.412037 0.850746 0.295455 0.757353 1253 1255 chr4 14480751 14486827 chr4:14480751-14486827:+:L1PA2:REF 12 + L1PA2 REF full-length LINC00504 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.696086 0.459394 0.746801 0.742177 0.242299 0.413203 0.0102612 0.782998 0.703622 0.654624 0.61194 0.931072 1254 1256 chr4 14660296 14666326 chr4:14660296-14666326:-:L1PA2:REF 12 - L1PA2 REF full-length LINC00504 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.876856 0.775485 0.850407 0.785043 0.530266 0.832792 0.0135891 0.936198 0.927395 0.847761 0.71582 0.963878 1255 1257 chr4 14755114 14761144 chr4:14755114-14761144:+:L1HS:REF 12 + L1HS REF full-length LINC00504 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.474838 0.692223 0.781924 0.833825 0.503077 0.887446 0.016129 0.919417 0.899547 0.758465 0.67265 0.895172 1256 1258 chr4 15174004 15180043 chr4:15174004-15180043:+:L1PA3:REF 12 + L1PA3 REF full-length LOC101929095 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.378897 0.832453 0.844156 0.860246 0.588028 0.928571 0.398477 0.660182 0.8887 0.904054 0.807941 0.894454 1257 1259 chr4 15278666 15284652 chr4:15278666-15284652:+:L1PA2:REF 12 + L1PA2 REF full-length LOC101929095 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.42654 0.492925 0.525458 0.797073 0.26055 0.278008 0.00396825 0.697368 0.690031 0.642424 0.722973 0.557143 1258 1260 chr4 15841546 15847572 chr4:15841546-15847572:+:L1HS:REF 12 + L1HS REF full-length CD38 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.144176 0.8923 0.858255 0.906581 0.839268 0.82493 0.031941 0.968976 0.965721 0.868809 0.931567 0.961612 1259 1261 chr4 16557085 16563224 chr4:16557085-16563224:+:L1PA3:REF 12 + L1PA3 REF full-length LDB2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909765 0.827966 0.976445 0.982058 0.589714 0.781208 0.0214241 0.970958 0.944154 0.970696 0.841172 0.957926 1260 1262 chr4 16628635 16632765 chr4:16628635-16632765:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated LDB2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.951111 0.572581 0.973978 0.843849 0.264706 0.557971 0.0 0.710938 0.566116 0.983333 0.707006 0.942308 1261 1263 chr4 16942776 16944630 chr4:16942776-16944630:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.815725 0.910983 0.94863 0.981803 0.745292 0.787004 0.0293255 0.625179 0.873717 0.974922 0.943069 0.96679 1262 1264 chr4 17728768 17730630 chr4:17728768-17730630:+:L1PA4:REF 11 + L1PA4 REF 3prime-truncated FAM184B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.906098 0.698892 0.679551 0.782849 0.65 0.619597 0.0283688 0.840215 0.798839 0.851574 0.962366 1263 1265 chr4 17848545 17849678 chr4:17848545-17849678:+:L1P1:REF 12 + L1P1 REF 3prime-truncated LCORL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.93508 0.981735 0.978862 0.987111 0.969349 0.988318 0.969251 0.985337 0.988597 0.984326 0.984829 0.984091 1264 1266 chr4 18559112 18565521 chr4:18559112-18565521:+:L1PA8:REF 1 + L1PA8 REF full-length MRC5 0.178571 1265 1267 chr4 19077911 19083929 chr4:19077911-19083929:-:L1HS:REF 5 - L1HS REF full-length HepG2,HeLaS3,K562,HCT116,IMR90 0.80265 0.715421 0.167808 0.965152 0.886121 1266 1268 chr4 19862802 19868968 chr4:19862802-19868968:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.830935 0.00722022 0.819527 0.888211 0.378531 0.0901639 0.005 0.246988 0.989437 0.880282 0.607692 0.918367 1267 1269 chr4 19920144 19921804 chr4:19920144-19921804:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921053 0.294118 0.979167 0.924765 0.839286 0.536232 0.025641 0.867347 1.0 0.980392 0.96063 0.926829 1268 1270 chr4 20738625 20744778 chr4:20738625-20744778:+:L1PA5:REF 9 + L1PA5 REF full-length PACRGL 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293 0.888889 0.97619 0.969697 0.956989 0.822222 1.0 0.952381 1.0 0.904762 1269 1271 chr4 21103586 21109754 chr4:21103586-21109754:-:L1PA3:REF 12 - L1PA3 REF full-length KCNIP4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.743646 0.671448 0.747894 0.714212 0.379968 0.486405 0.0145985 0.148019 0.689627 0.722919 0.683967 0.944675 1270 1272 chr4 21159390 21165421 chr4:21159390-21165421:+:L1HS:REF 8 + L1HS REF full-length KCNIP4 HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293 0.939363 0.848469 0.84056 0.584416 0.0377818 0.924067 0.848809 0.934669 Rodriguez-Martin_2020:7 1271 1273 chr4 21352152 21358331 chr4:21352152-21358331:+:L1PA6:REF 12 + L1PA6 REF full-length KCNIP4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.795122 0.0305085 0.364444 0.247076 0.0325581 0.0307692 0.0 0.08125 0.0872727 0.36 0.276923 0.9 1272 1274 chr4 22039466 22041317 chr4:22039466-22041317:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated MRC5 0.0168539 1273 1275 chr4 22146427 22152457 chr4:22146427-22152457:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.827357 0.296548 0.601942 0.676976 0.271429 0.333333 0.0111654 0.23741 0.687009 0.801187 0.557319 0.946121 1274 1276 chr4 23614771 23620793 chr4:23614771-23620793:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.189415 0.590308 0.801226 0.835603 0.521964 0.776151 0.149502 0.577259 0.715054 0.910973 0.572581 0.820896 Rodriguez-Martin_2020:2,Tubio_2014:1 1275 1277 chr4 23641744 23647772 chr4:23641744-23647772:-:L1PA3:REF 9 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.784946 0.294798 0.730769 0.696742 0.485437 0.382979 0.623457 0.810127 0.693182 1276 1278 chr4 24938412 24944561 chr4:24938412-24944561:+:L1PA4:REF 12 + L1PA4 REF full-length CCDC149 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.881877 0.529096 0.7744 0.75066 0.572188 0.438776 0.0188442 0.908505 0.942691 0.729064 0.719844 0.958678 1277 1279 chr4 26167871 26170223 chr4:26167871-26170223:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.934752 0.881781 0.889034 0.975916 0.894009 0.828571 0.0993631 0.934142 0.969499 0.973154 0.892508 0.885845 1278 1280 chr4 26640435 26645841 chr4:26640435-26645841:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated TBC1D19 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.933702 0.978193 0.962457 0.981053 0.979058 0.97076 0.776892 0.980769 0.97019 0.950893 0.975309 0.88587 1279 1281 chr4 26652540 26656020 chr4:26652540-26656020:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated TBC1D19 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919962 0.917375 0.983091 0.983292 0.962736 0.971616 0.678303 0.955525 0.982133 0.976331 0.965318 0.979267 1280 1282 chr4 27070203 27076264 chr4:27070203-27076264:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.470693 0.799461 0.739508 0.782424 0.794837 0.609436 0.0720598 0.771707 0.899438 0.751861 0.847089 0.872283 1281 1283 chr4 27375687 27381719 chr4:27375687-27381719:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.211565 0.704113 0.877262 0.892681 0.71332 0.816032 0.0938098 0.939779 0.934959 0.855341 0.907863 0.976339 1282 1284 chr4 28851527 28857668 chr4:28851527-28857668:-:L1PA5:REF 4 - L1PA5 REF full-length BJ,MRC5,HEK293T,HEK293 0.340909 0.586735 0.0447761 0.0416667 1283 1285 chr4 29893106 29893108 chr4:29893106-29893108:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip5482,1KGP:L1_umary_LINE1_808,Philippe:EXP_ID_0910 IMR90 0.915254 1284 1286 chr4 30623733 30624057 chr4:30623733-30624057:+:L1P3:REF 2 + L1P3 REF 3prime-truncated HepG2,MRC5 0.0229885 0.495192 1285 1287 chr4 33240863 33242027 chr4:33240863-33242027:-:L1P2:REF 1 - L1P2 REF 3prime-truncated MRC5 0.178082 1286 1288 chr4 37407738 37414133 chr4:37407738-37414133:+:L1PA7:REF 2 + L1PA7 REF full-length NWD2 2102Ep,MRC5 0.693878 0.586207 1287 1289 chr4 38442787 38448926 chr4:38442787-38448926:-:L1PA4:REF 12 - L1PA4 REF full-length LINC01258 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887519 0.719189 0.49797 0.464692 0.242915 0.674487 0.291513 0.667279 0.738318 0.477218 0.17134 0.875776 1288 1290 chr4 41270421 41276554 chr4:41270421-41276554:-:L1PA4:REF 12 - L1PA4 REF full-length UCHL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.892063 0.65977 0.965625 0.954412 0.929825 0.8 0.0213675 0.865 0.949045 0.969925 0.977612 0.966667 1289 1291 chr4 41349460 41355618 chr4:41349460-41355618:+:L1PA6:REF 12 + L1PA6 REF full-length LIMCH1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.959732 0.626728 0.952586 0.819178 0.961702 0.9625 0.0 0.985714 0.975089 0.759615 0.973684 0.95 1290 1292 chr4 42041757 42048239 chr4:42041757-42048239:+:L1PA7:REF 1 + L1PA7 REF full-length SLC30A9 MRC5 0.0990099 1291 1293 chr4 42696300 42702436 chr4:42696300-42702436:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.849128 0.214509 0.558824 0.536713 0.82171 0.547222 0.0117647 0.871444 0.92176 0.552311 0.882733 0.906844 1292 1294 chr4 43092867 43099023 chr4:43092867-43099023:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.841989 0.379893 0.587334 0.681659 0.215919 0.264438 0.0106157 0.412969 0.531105 0.633833 0.385159 0.930283 1293 1295 chr4 43891541 43897640 chr4:43891541-43897640:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.888325 0.240654 0.379828 0.453048 0.116279 0.103774 0.0132013 0.232143 0.367403 0.435 0.410256 0.927928 1294 1296 chr4 44264460 44270554 chr4:44264460-44270554:+:L1PA3:REF 12 + L1PA3 REF full-length KCTD8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.735265 0.343629 0.545654 0.586173 0.254679 0.309524 0.00905563 0.316556 0.570022 0.616246 0.583164 0.820789 1295 1297 chr4 44743989 44750132 chr4:44743989-44750132:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.912698 0.292593 0.542553 0.534884 0.2 0.457944 0.0147059 0.372093 0.728033 0.571429 0.713636 0.802721 1296 1298 chr4 44879460 44885597 chr4:44879460-44885597:+:L1PA4:REF 10 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,H1 0.873418 0.424837 0.632653 0.675214 0.183333 0.0 0.369863 0.798319 0.678571 0.958904 1297 1299 chr4 45051553 45054140 chr4:45051553-45054140:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.860248 0.0417335 0.72 0.639563 0.0676471 0.305556 0.0166667 0.604762 0.581921 0.696154 0.438931 0.948571 1298 1300 chr4 46404685 46410810 chr4:46404685-46410810:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.8 0.281013 0.501066 0.809133 0.0759494 0.368421 0.05 0.127341 0.179533 0.730769 0.67 0.878788 1299 1301 chr4 46567128 46573270 chr4:46567128-46573270:+:L1PA3:REF 9 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,K562,MCF7,HCT116,IMR90,H1 0.909091 0.627907 0.597403 0.649701 0.0 0.45082 0.615385 0.604651 0.874172 1300 1302 chr4 47294116 47300250 chr4:47294116-47300250:+:L1PA3:REF 7 + L1PA3 REF full-length GABRB1 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116 0.78125 0.303371 0.288 0.923529 0.179104 0.0333333 0.471429 1301 1303 chr4 48051954 48057974 chr4:48051954-48057974:-:L1HS:REF 11 - L1HS REF full-length TXK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.14802 0.905887 0.874693 0.862726 0.921739 0.866939 0.921348 0.982494 0.838156 0.936216 0.869912 1302 1304 chr4 48711074 48717284 chr4:48711074-48717284:+:L1PA3:REF 12 + L1PA3 REF full-length FRYL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91269 0.927248 0.988142 0.945656 0.966653 0.974215 0.932232 0.970455 0.981321 0.987097 0.968896 0.981373 1303 1305 chr4 48864580 48870732 chr4:48864580-48870732:-:L1PA4:REF 12 - L1PA4 REF full-length OCIAD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.86178 0.706878 0.820404 0.843815 0.630021 0.883333 0.228723 0.949266 0.978046 0.811508 0.877524 0.900424 1304 1306 chr4 48917870 48923851 chr4:48917870-48923851:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.945431 0.88051 0.902985 0.953245 0.89373 0.656805 0.681643 0.669435 0.966102 0.917031 0.958175 0.969388 1305 1307 chr4 49007476 49013621 chr4:49007476-49013621:-:L1PA6:REF 7 - L1PA6 REF full-length CWH43 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HEK293 0.877193 0.0 0.346939 0.433071 0.15 0.0 0.610169 1306 1308 chr4 49067846 49071936 chr4:49067846-49071936:+:L1P1:REF 10 + L1P1 REF 3prime-truncated CWH43 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293,H1 0.0627178 0.421053 0.644013 0.821918 0.401899 0.226667 0.609626 0.955285 0.835556 0.38674 1307 1309 chr4 49071924 49074016 chr4:49071924-49074016:+:L1PA3:REF 10 + L1PA3 REF 3prime-truncated CWH43 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,HEK293,H1 0.540541 0.48913 0.561404 0.507599 0.260563 0.47561 0.102564 0.720779 0.448276 0.74359 1308 1310 chr4 49169833 49175964 chr4:49169833-49175964:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.558376 0.570312 0.466667 0.559717 0.31723 0.195021 0.119565 0.179063 0.491329 0.685484 0.51992 0.554348 1309 1311 chr4 49620917 49626617 chr4:49620917-49626617:+:L1P1:REF 11 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.543189 0.243161 0.388535 0.385739 0.037844 0.00402145 0.0379061 0.193324 0.38089 0.175778 0.727969 1310 1312 chr4 51935074 51941089 chr4:51935074-51941089:-:L1PA3:REF 6 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116 0.603093 0.870192 0.869231 0.704104 0.786364 0.948718 1311 1313 chr4 51952088 51953366 chr4:51952088-51953366:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.817797 0.420382 0.363636 0.371148 0.179211 0.0 0.00408163 0.911565 0.879656 0.378571 0.446009 0.760684 1312 1314 chr4 51985080 51990520 chr4:51985080-51990520:-:L1P1:REF 11 - L1P1 REF 3prime-truncated LRRC66 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.711538 0.381877 0.386364 0.387244 0.11413 0.0326087 0.0 0.603448 0.397959 0.298507 0.710526 1313 1315 chr4 52119227 52123104 chr4:52119227-52123104:-:L1P1:REF 11 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.922101 0.704942 0.824212 0.865405 0.809346 0.446809 0.929412 0.937919 0.730038 0.870614 0.95339 1314 1316 chr4 52218222 52224371 chr4:52218222-52224371:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905488 0.845238 0.884706 0.821185 0.872093 0.694215 0.0242215 0.812245 0.901124 0.742857 0.877323 0.980198 1315 1317 chr4 52319788 52325813 chr4:52319788-52325813:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.912312 0.567164 0.691525 0.740943 0.64346 0.465385 0.0264151 0.838084 0.817114 0.75493 0.781161 0.815661 1316 1318 chr4 52446348 52452482 chr4:52446348-52452482:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.800604 0.152174 0.53352 0.54415 0.0807799 0.0406091 0.0 0.608696 0.5375 0.544715 0.267913 0.851351 1317 1319 chr4 52538471 52544498 chr4:52538471-52544498:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.715807 0.851922 0.903297 0.942165 0.925308 0.877193 0.0856918 0.924837 0.97116 0.968847 0.937626 0.954257 1318 1320 chr4 52816456 52822486 chr4:52816456-52822486:+:L1HS:REF 12 + L1HS REF full-length LINC01618 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.56091 0.941914 0.925382 0.962158 0.950713 0.804145 0.140655 0.933884 0.963974 0.952104 0.982082 0.940922 1319 1321 chr4 52895176 52901291 chr4:52895176-52901291:-:L1PA4:REF 12 - L1PA4 REF full-length SCFD2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901042 0.956767 0.975248 0.96781 0.909375 0.970395 0.948636 0.952273 0.978448 0.97733 0.921311 0.954268 1320 1322 chr4 52970031 52976182 chr4:52970031-52976182:+:L1PA4:REF 12 + L1PA4 REF full-length SCFD2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929548 0.972538 0.978452 0.97224 0.959548 0.9163 0.657767 0.955357 0.968547 0.957806 0.961219 0.969697 1321 1323 chr4 53213660 53219784 chr4:53213660-53219784:-:L1PA5:REF 12 - L1PA5 REF full-length SCFD2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.892857 0.802198 0.987288 0.964557 0.965368 0.975207 0.937173 0.913333 0.972763 0.931373 0.944785 0.95283 1322 1324 chr4 53297965 53304112 chr4:53297965-53304112:+:L1PA4:REF 12 + L1PA4 REF full-length SCFD2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.84127 0.869116 0.87251 0.982 0.832321 0.920091 0.84918 0.92915 0.922059 0.866044 0.87 0.9163 1323 1325 chr4 53328731 53334762 chr4:53328731-53334762:+:L1PA2:REF 11 + L1PA2 REF full-length SCFD2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.841637 0.90184 0.981045 0.987257 0.868339 0.978908 0.543478 0.547915 0.979343 0.885057 0.984595 1324 1326 chr4 53339989 53346107 chr4:53339989-53346107:+:L1PA6:REF 12 + L1PA6 REF full-length SCFD2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.93117 0.973941 0.949309 0.976066 0.962392 0.965909 0.934949 0.960411 0.971044 0.977131 0.965247 0.948995 1325 1327 chr4 53404014 53410141 chr4:53404014-53410141:-:L1PA3:REF 12 - L1PA3 REF full-length FIP1L1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.926316 0.98715 0.981132 0.981674 0.974422 0.986083 0.971429 0.990991 0.992188 0.978131 0.978723 0.992874 1326 1328 chr4 53502121 53502123 chr4:53502121-53502123:-:L1HS:NONREF 1 - L1HS KNR 1KGP:L1_umary_LINE1_840,Philippe:EXP_ID_0935 LNX1 K562 0.377982 1327 1329 chr4 53564637 53570664 chr4:53564637-53570664:+:L1PA3:REF 5 + L1PA3 REF full-length LNX1 2102Ep,HepG2,BJ,MRC5,HCT116 0.196262 0.886364 0.89 0.97411 0.867133 1328 1330 chr4 53823629 53829782 chr4:53823629-53829782:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.828452 0.632231 0.924242 0.939173 0.862543 0.567797 0.0 0.752294 0.897959 0.892857 0.944954 1329 1331 chr4 53877116 53883135 chr4:53877116-53883135:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.122426 0.804665 0.839965 0.852029 0.821394 0.560465 0.0628507 0.84595 0.888007 0.899833 0.84838 0.738014 1330 1332 chr4 54243580 54249798 chr4:54243580-54249798:+:L1PA3:REF 12 + L1PA3 REF full-length PDGFRA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878427 0.8707 0.987143 0.980463 0.860619 0.775253 0.0533597 0.929515 0.94302 0.986364 0.919708 0.967517 1331 1333 chr4 54450897 54453929 chr4:54450897-54453929:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.801527 0.045283 0.539326 0.342857 0.45098 0.0206186 0.0379747 0.652632 0.210811 0.292135 0.356061 0.541667 1332 1334 chr4 54458779 54459751 chr4:54458779-54459751:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.965116 0.0238095 0.892857 0.842391 0.878049 0.0 0.188525 0.975 0.220472 0.7625 0.826531 0.880597 1333 1335 chr4 54528934 54535093 chr4:54528934-54535093:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.854369 0.836957 0.951524 0.970082 0.951178 0.632399 0.910165 0.979943 0.879085 0.980769 0.955801 0.961783 1334 1336 chr4 54807074 54813217 chr4:54807074-54813217:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.0 1335 1337 chr4 55619153 55625181 chr4:55619153-55625181:+:L1PA2:REF 12 + L1PA2 REF full-length NMU 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.216667 0.407674 0.762466 0.904762 0.955801 0.834951 0.884161 0.978022 0.983377 0.825193 0.963615 0.725971 1336 1338 chr4 55841737 55847894 chr4:55841737-55847894:+:L1PA3:REF 12 + L1PA3 REF full-length EXOC1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.635135 0.719934 0.778746 0.931434 0.448687 0.760504 0.237113 0.0395683 0.85155 0.82449 0.906667 0.82684 1337 1339 chr4 56331254 56337382 chr4:56331254-56337382:-:L1PA3:REF 12 - L1PA3 REF full-length KIAA1211 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.934694 0.972973 0.96 0.965829 0.9811 0.967857 0.945161 0.992565 0.984183 0.97561 0.955696 0.972067 1338 1340 chr4 56884322 56885537 chr4:56884322-56885537:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.881679 0.407035 0.78481 0.861878 0.944785 0.988372 0.544715 0.915663 0.987854 0.921212 0.988636 0.992063 1339 1341 chr4 57383830 57389973 chr4:57383830-57389973:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.829694 0.214859 0.749351 0.552632 0.495787 0.335366 0.00511073 0.716702 0.787086 0.634006 0.72617 0.883234 1340 1342 chr4 57531853 57537985 chr4:57531853-57537985:-:L1PA4:REF 7 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,H1 0.875 0.0526316 0.285714 0.304348 0.137255 0.478261 0.852941 1341 1343 chr4 57562316 57568347 chr4:57562316-57568347:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.280882 0.755319 0.781515 0.804814 0.568324 0.686477 0.0355854 0.666077 0.7849 0.806335 0.759214 0.898348 1342 1344 chr4 57568343 57571561 chr4:57568343-57571561:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863354 0.0514286 0.247059 0.309055 0.269608 0.0654206 0.0 0.130952 0.550562 0.284483 0.246914 0.955224 1343 1345 chr4 57714124 57717199 chr4:57714124-57717199:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.728972 0.0163043 0.278195 0.142276 0.367742 0.0 0.0208333 0.0958904 0.559633 0.180328 0.224299 0.885714 1344 1346 chr4 57899612 57900878 chr4:57899612-57900878:+:L1PA3:REF 6 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HCT116,HEK293 0.747126 0.349398 0.477612 0.481013 0.608696 0.323529 1345 1347 chr4 57918071 57919673 chr4:57918071-57919673:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.795571 0.547009 0.729659 0.730692 0.648276 0.583784 0.0296167 0.487719 0.795539 0.762431 0.599045 0.924342 1346 1348 chr4 58149260 58155721 chr4:58149260-58155721:+:L1PA7:REF 1 + L1PA7 REF full-length MRC5 0.0 1347 1349 chr4 58397662 58401922 chr4:58397662-58401922:-:L1PA4:REF 11 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.774 0.280045 0.45953 0.353417 0.27883 0.208754 0.00235849 0.563712 0.460411 0.305243 0.871866 1348 1350 chr4 59078847 59084877 chr4:59078847-59084877:+:L1HS:REF 7 + L1HS REF full-length 2102Ep,HepG2,HeLaS3,K562,HCT116,IMR90,H1 0.0798548 0.719897 0.834 0.0133197 0.97272 0.863365 0.947262 1349 1351 chr4 59206451 59212619 chr4:59206451-59212619:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.709581 0.0973154 0.492228 0.466143 0.414847 0.284768 0.00766284 0.0823045 0.784 0.479263 0.278169 0.875706 1350 1352 chr4 59392113 59394959 chr4:59392113-59394959:-:L1P3:REF 12 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.815385 0.0792899 0.420872 0.310559 0.439394 0.396667 0.006 0.254279 0.485133 0.35376 0.245 0.920482 1351 1353 chr4 59419693 59425790 chr4:59419693-59425790:+:L1PA5:REF 10 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293,H1 1.0 0.8 0.653846 0.615741 0.578947 0.0 0.759259 0.526316 0.653846 0.958333 1352 1354 chr4 59428521 59430467 chr4:59428521-59430467:+:L1PA5:REF 1 + L1PA5 REF 3prime-truncated HCT116 0.0 1353 1355 chr4 60413392 60419835 chr4:60413392-60419835:-:L1PA7:REF 3 - L1PA7 REF full-length HepG2,MRC5,HEK293 0.0 0.163462 0.305556 1354 1356 chr4 60695876 60701951 chr4:60695876-60701951:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918803 0.0393939 0.897106 0.915905 0.659864 0.235849 0.0135747 0.716667 0.616279 0.992701 0.57384 0.917722 1355 1357 chr4 60831273 60837284 chr4:60831273-60837284:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.630264 0.474238 0.851665 0.790594 0.758098 0.436252 0.0187997 0.359606 0.862295 0.911633 0.942241 0.895433 1356 1358 chr4 61011661 61017788 chr4:61011661-61017788:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.820276 0.187861 0.643148 0.679443 0.790698 0.232274 0.00974026 0.776961 0.574495 0.692708 0.855014 0.922306 1357 1359 chr4 61367239 61373248 chr4:61367239-61373248:-:L1PA3:REF 11 - L1PA3 REF full-length ADGRL3 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.252669 0.551331 0.747368 0.871901 0.0 0.0 0.30303 0.798479 0.816794 0.927374 0.875 1358 1360 chr4 61641294 61647303 chr4:61641294-61647303:-:L1PA3:REF 9 - L1PA3 REF full-length ADGRL3 2102Ep,HepG2,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.241176 0.194139 0.978723 0.0 0.026087 0.375 0.862637 0.972727 0.793814 1359 1361 chr4 61743721 61749869 chr4:61743721-61749869:+:L1PA3:REF 12 + L1PA3 REF full-length ADGRL3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.845726 0.700361 0.778775 0.858009 0.962003 0.687943 0.0134794 0.820513 0.84735 0.924716 0.935229 0.958812 1360 1362 chr4 61939927 61945962 chr4:61939927-61945962:-:L1HS:REF 12 - L1HS REF full-length ADGRL3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.279979 0.684441 0.854839 0.933024 0.973903 0.822954 0.0243746 0.85012 0.944556 0.904287 0.939671 0.946864 1361 1363 chr4 62088338 62094802 chr4:62088338-62094802:-:L1PA7:REF 12 - L1PA7 REF full-length ADGRL3-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.725275 0.0512821 0.149038 0.283673 0.684015 0.134831 0.00558659 0.24 0.572016 0.291262 0.656566 0.866197 1362 1364 chr4 62309260 62315383 chr4:62309260-62315383:+:L1PA4:REF 1 + L1PA4 REF full-length K562 0.0 1363 1365 chr4 62602276 62608302 chr4:62602276-62608302:+:L1PA3:REF 3 + L1PA3 REF full-length HepG2,MRC5,HEK293T 0.771863 0.743017 0.434783 1364 1366 chr4 62726948 62732969 chr4:62726948-62732969:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.337652 0.83218 0.875084 0.860596 0.936554 0.823985 0.0257848 0.912139 0.935512 0.869718 0.903627 0.976134 1365 1367 chr4 63097264 63098444 chr4:63097264-63098444:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.784195 0.319149 0.42 0.487515 0.508353 0.293893 0.0102828 0.616667 0.609375 0.470588 0.400662 0.926702 1366 1368 chr4 63244989 63250959 chr4:63244989-63250959:-:L1PA4:REF 8 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293,H1 0.344538 0.705426 0.628571 0.683363 0.815668 0.753731 0.741667 0.754545 1367 1369 chr4 64859153 64865171 chr4:64859153-64865171:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.197353 0.815581 0.8125 0.806246 0.938576 0.760684 0.0184651 0.8683 0.925989 0.818103 0.82935 0.958696 1368 1370 chr4 65052166 65058198 chr4:65052166-65058198:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.82802 0.616856 0.734661 0.703119 0.863284 0.641441 0.00607533 0.83494 0.881929 0.793839 0.839614 0.893993 1369 1371 chr4 65288237 65294261 chr4:65288237-65294261:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0858506 0.589028 0.688297 0.688284 0.840265 0.733546 0.012828 0.739507 0.857451 0.762552 0.838428 0.839265 1370 1372 chr4 65993299 65999302 chr4:65993299-65999302:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0317365 0.360752 0.82268 0.803994 0.00761542 0.334913 0.00472193 0.459138 0.9361 0.761518 0.655016 0.756962 1371 1373 chr4 66782770 66783455 chr4:66782770-66783455:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906426 0.516652 0.679856 0.734127 0.929423 0.383721 0.00951249 0.651656 0.883696 0.702857 0.943442 0.96371 1372 1374 chr4 66981462 66984461 chr4:66981462-66984461:+:L1P3:REF 2 + L1P3 REF 3prime-truncated HepG2,MRC5 0.0267857 0.493392 1373 1375 chr4 67062389 67068523 chr4:67062389-67068523:-:L1PA3:REF 5 - L1PA3 REF full-length 2102Ep,HepG2,MRC5,MCF7,HCT116 0.66 0.267857 0.668966 0.594595 0.787611 1374 1376 chr4 67177042 67183058 chr4:67177042-67183058:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.133916 0.777285 0.787071 0.878295 0.690254 0.0127346 0.468612 0.901592 0.817178 0.879248 0.946686 1375 1377 chr4 67294850 67301125 chr4:67294850-67301125:-:L1PA4:REF 1 - L1PA4 REF full-length MRC5 0.25 1376 1378 chr4 67967414 67973442 chr4:67967414-67973442:-:L1PA2:REF 12 - L1PA2 REF full-length TMPRSS11A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.605516 0.865073 0.76165 0.574526 0.817374 0.672878 0.237543 0.95795 0.970885 0.746988 0.858345 0.798956 1377 1379 chr4 68194058 68200204 chr4:68194058-68200204:+:L1PA2:REF 4 + L1PA2 REF full-length FTLP10 MRC5,K562,MCF7,H1 0.712274 0.0989399 0.980392 0.930348 1378 1380 chr4 68420253 68426333 chr4:68420253-68426333:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.825301 0.478411 0.76962 0.877717 0.812095 0.735294 0.423077 0.54902 0.980488 0.791667 0.884181 0.958333 1379 1381 chr4 68509804 68515820 chr4:68509804-68515820:-:L1PA2:REF 7 - L1PA2 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,HEK293 0.839161 0.333333 0.470383 0.741379 0.267857 0.62 0.75 1380 1382 chr4 68618785 68621995 chr4:68618785-68621995:+:L1P2:REF 11 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.0681818 0.730964 0.164103 0.106849 0.356763 0.0252525 0.0208333 0.833898 0.792947 0.278008 0.821029 1381 1383 chr4 68621991 68622809 chr4:68621991-68622809:-:L1P2:REF 7 - L1P2 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,K562,HCT116,HEK293 0.956522 0.5125 0.494799 0.797619 0.0 0.978632 0.82963 1382 1384 chr4 68641689 68646386 chr4:68641689-68646386:-:L1PA8:REF 12 - L1PA8 REF 3prime-truncated UGT2B15 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872642 0.967822 0.519582 0.510373 0.762646 0.159851 0.0340426 0.981221 0.990893 0.628159 0.736419 0.890756 1383 1385 chr4 68677498 68683661 chr4:68677498-68683661:-:L1PA4:REF 11 - L1PA4 REF full-length UGT2B15 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.764599 0.378136 0.200653 0.214939 0.367852 0.0383142 0.0239521 0.896869 0.290503 0.312775 0.885835 1384 1386 chr4 68707017 68707021 chr4:68707017-68707021:-:L1HS:NONREF 5 - L1HS KNR euL1db:mrip5637,Philippe:EXP_ID_0953 2102Ep,HepG2,MRC5,HeLaS3,IMR90 0.73057 0.913849 0.764319 0.59801 0.801905 1385 1387 chr4 68720494 68721028 chr4:68720494-68721028:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.877984 0.975752 0.319444 0.381129 0.588547 0.0763889 0.00869565 0.96118 0.951522 0.403361 0.389058 0.894428 1386 1388 chr4 69660885 69661727 chr4:69660885-69661727:-:L1P2:REF 9 - L1P2 REF 3prime-truncated UGT2A1 HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.02 0.047619 0.0676692 0.0384615 0.0909091 0.0454545 0.827586 0.3 0.0333333 1387 1389 chr4 69664009 69667565 chr4:69664009-69667565:+:L1HS:REF 11 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0918259 0.709703 0.762754 0.65248 0.362876 0.00846979 0.818182 0.962327 0.766576 0.862903 0.911205 1388 1390 chr4 70015396 70019676 chr4:70015396-70019676:-:L1HS:REF 12 - L1HS REF 3prime-truncated HTN3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.333333 0.911905 0.672619 0.734143 0.679077 0.51184 0.0121457 0.643917 0.977253 0.649326 0.861482 0.93988 1389 1391 chr4 70207215 70213358 chr4:70207215-70213358:-:L1PA6:REF 2 - L1PA6 REF full-length ODAM HepG2,MRC5 0.979167 0.433962 1390 1392 chr4 70417906 70424057 chr4:70417906-70424057:-:L1PA4:REF 9 - L1PA4 REF full-length MUC7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293 0.77381 0.323529 0.284314 0.411616 0.0925926 0.125 0.898551 0.326923 0.357143 1391 1393 chr4 71053846 71059857 chr4:71053846-71059857:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0579216 0.891822 0.923178 0.903852 0.716601 0.809117 0.00625978 0.515709 0.432445 0.966565 0.965902 0.814815 1392 1394 chr4 71308427 71314945 chr4:71308427-71314945:+:L1PA8:REF 6 + L1PA8 REF full-length SLC4A4 HepG2,MRC5,HEK293T,K562,HCT116,HEK293 0.316667 0.666667 0.885714 0.0 0.166667 1.0 1393 1395 chr4 71418823 71419847 chr4:71418823-71419847:-:L1PA3:REF 1 - L1PA3 REF 3prime-truncated SLC4A4 MRC5 0.482759 1394 1396 chr4 71791666 71797803 chr4:71791666-71797803:-:L1PA6:REF 10 - L1PA6 REF full-length GC HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.181495 0.313364 0.350442 0.830645 0.1 0.147287 0.357895 0.438144 0.422222 0.44382 1395 1397 chr4 72119478 72125359 chr4:72119478-72125359:+:L1P3:REF 1 + L1P3 REF 3prime-truncated NPFFR2 MRC5 0.36 1396 1398 chr4 72142299 72142568 chr4:72142299-72142568:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated NPFFR2 MRC5 0.0 1397 1399 chr4 72163776 72169919 chr4:72163776-72169919:-:L1PA3:REF 10 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293,H1 0.755319 0.3125 0.456897 0.407407 0.74359 0.0142857 0.0972222 0.256944 0.638554 0.884058 1398 1400 chr4 72514834 72520993 chr4:72514834-72520993:-:L1PA3:REF 12 - L1PA3 REF full-length ADAMTS3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.75 0.691358 0.915493 0.827051 0.911392 0.555556 0.726562 0.823529 0.846154 0.769231 0.83871 0.980769 1399 1401 chr4 72593713 72599863 chr4:72593713-72599863:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872544 0.237095 0.86747 0.788845 0.0605496 0.257184 0.798083 0.564626 0.664344 0.82265 0.912119 0.954927 1400 1402 chr4 72845982 72847627 chr4:72845982-72847627:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.754386 0.431373 0.574074 0.286713 0.5 0.0238095 0.444444 0.644444 0.267442 0.196078 0.348837 0.969697 1401 1403 chr4 73360155 73366246 chr4:73360155-73366246:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.834087 0.829132 0.606727 0.664725 0.624082 0.455128 0.248869 0.470067 0.921816 0.682692 0.591716 0.82866 1402 1404 chr4 74717539 74723587 chr4:74717539-74723587:-:L1HS:REF 9 - L1HS REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293,H1 0.637397 0.72093 0.918702 0.92892 0.864048 0.4568 0.954936 0.945833 0.967492 Gardner_2017:2,Rodriguez-Martin_2020:6 1403 1405 chr4 74910212 74916645 chr4:74910212-74916645:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.735294 0.0408163 0.133333 0.112903 0.741935 0.0 0.0 0.352941 0.869565 0.125 0.722222 0.933333 1404 1406 chr4 75126805 75132838 chr4:75126805-75132838:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.141561 0.799511 0.708275 0.738714 0.852174 0.661765 0.0129032 0.880488 0.326329 0.74717 0.957565 0.86383 1405 1407 chr4 75215015 75221174 chr4:75215015-75221174:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.829659 0.521355 0.577603 0.43787 0.837891 0.131833 0.00518135 0.86217 0.954802 0.589286 0.894309 0.914474 1406 1408 chr4 75270579 75276607 chr4:75270579-75276607:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.473262 0.607004 0.462644 0.475282 0.617261 0.442105 0.0311526 0.694253 0.648855 0.574344 0.638356 0.889091 1407 1409 chr4 75298846 75301125 chr4:75298846-75301125:-:L1PA6:REF 6 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HCT116,HEK293 0.833333 0.0 0.269231 0.171053 0.75 0.173913 1408 1410 chr4 75331003 75333439 chr4:75331003-75333439:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated MRC5 0.625 1409 1411 chr4 75401194 75407226 chr4:75401194-75407226:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.221937 0.909813 0.79638 0.855525 0.909852 0.763975 0.0267023 0.900149 0.969568 0.834416 0.97518 0.932701 1410 1412 chr4 75418529 75421391 chr4:75418529-75421391:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.897436 0.71028 0.430233 0.479381 0.759036 0.0606061 0.0266667 0.657895 0.904762 0.487179 0.765625 0.714286 1411 1413 chr4 75442536 75448552 chr4:75442536-75448552:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.474293 0.865104 0.776733 0.799225 0.834444 0.603568 0.0547355 0.898032 0.970045 0.760563 0.807229 0.903179 1412 1414 chr4 76477675 76484153 chr4:76477675-76484153:+:L1PA7:REF 12 + L1PA7 REF full-length SHROOM3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.944444 0.470588 0.636364 0.829333 0.9 0.492308 0.0149254 0.944444 0.965812 0.771739 0.935065 0.955556 1413 1415 chr4 77298460 77301620 chr4:77298460-77301620:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated MRC5 0.888889 1414 1416 chr4 77301626 77303726 chr4:77301626-77303726:-:L1P2:REF 7 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,MCF7,HCT116,IMR90 0.72093 0.0656566 0.492308 0.16 0.589928 0.925926 0.474138 1415 1417 chr4 77321655 77327742 chr4:77321655-77327742:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.798319 0.469697 0.631579 0.454139 0.330986 0.271739 0.0 0.766667 0.846154 0.614035 0.781609 0.821429 1416 1418 chr4 77522544 77524858 chr4:77522544-77524858:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated CXCL13 MRC5 0.4 1417 1419 chr4 77531376 77534179 chr4:77531376-77534179:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated CXCL13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.81069 0.0621118 0.216036 0.550647 0.297521 0.00414938 0.00598802 0.970954 0.877876 0.495327 0.876877 0.808362 1418 1420 chr4 78105735 78111765 chr4:78105735-78111765:+:L1HS:REF 12 + L1HS REF full-length FRAS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.214004 0.909758 0.983379 0.792183 0.969715 0.815528 0.0675361 0.911454 0.983465 0.809417 0.971353 0.941587 1419 1421 chr4 78112832 78118967 chr4:78112832-78118967:-:L1PA4:REF 12 - L1PA4 REF full-length FRAS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90057 0.976761 0.93509 0.651007 0.938628 0.176471 0.006917 0.847222 0.974817 0.738265 0.940391 0.945718 1420 1422 chr4 78125567 78126535 chr4:78125567-78126535:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated FRAS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.82971 0.817276 0.952555 0.474672 0.872093 0.201754 0.020202 0.71519 0.976667 0.40678 0.95098 0.9 1421 1423 chr4 78192050 78195922 chr4:78192050-78195922:-:L1P1:REF 12 - L1P1 REF 3prime-truncated FRAS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905369 0.98103 0.92196 0.612776 0.917637 0.559124 0.0220049 0.938394 0.982863 0.663043 0.91755 0.93248 1422 1424 chr4 78271318 78277463 chr4:78271318-78277463:-:L1PA5:REF 12 - L1PA5 REF full-length FRAS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.844828 0.985876 0.932584 0.535294 0.913043 0.194444 0.0116732 0.692737 0.96679 0.535519 0.897196 0.931624 1423 1425 chr4 78301853 78307882 chr4:78301853-78307882:-:L1PA3:REF 12 - L1PA3 REF full-length FRAS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.697595 0.977129 0.963037 0.883254 0.958018 0.732075 0.223481 0.930801 0.984091 0.845455 0.965318 0.925253 1424 1426 chr4 78347980 78354013 chr4:78347980-78354013:+:L1HS:REF 2 + L1HS REF full-length FRAS1 2102Ep,MCF7 0.335832 0.927573 1425 1427 chr4 78501721 78506887 chr4:78501721-78506887:-:L1PA6:REF 4 - L1PA6 REF 3prime-truncated FRAS1 2102Ep,MRC5,K562,HCT116 0.670886 0.938462 0.136364 0.644444 1426 1428 chr4 79704552 79710581 chr4:79704552-79710581:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.128122 0.839347 0.830769 0.921209 0.915584 0.645918 0.736842 0.881402 0.905863 0.90884 0.929025 0.913303 Philippe_2016:1 1427 1429 chr4 79937715 79943746 chr4:79937715-79943746:+:L1HS:REF 12 + L1HS REF full-length ANTXR2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.110289 0.976829 0.985383 0.977532 0.856423 0.845898 0.970024 0.848241 0.980154 0.971675 0.980973 0.909212 1428 1430 chr4 79966907 79972933 chr4:79966907-79972933:+:L1HS:REF 5 + L1HS REF full-length ANTXR2 HeLaS3,K562,MCF7,HCT116,H1 0.899123 0.976855 0.891165 0.984975 0.964824 Gardner_2017:3,Rodriguez-Martin_2020:7,Tubio_2014:2 1429 1431 chr4 80855406 80861562 chr4:80855406-80861562:-:L1PA3:REF 12 - L1PA3 REF full-length CFAP299 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.907504 0.48757 0.768746 0.840718 0.647848 0.332524 0.0130522 0.794805 0.849023 0.789474 0.585752 0.916459 1430 1432 chr4 81153755 81154892 chr4:81153755-81154892:+:L1PA3:REF 7 + L1PA3 REF 3prime-truncated PRKG2 HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,HEK293 0.234286 0.908397 0.911681 0.716495 0.016129 0.0123967 0.921687 1431 1433 chr4 81473382 81475487 chr4:81473382-81475487:+:L1PA7:REF 9 + L1PA7 REF 3prime-truncated RASGEF1B 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293 0.839506 0.88024 0.909091 0.917373 0.943396 0.0729167 0.717557 0.946565 0.941176 1432 1434 chr4 81714938 81720512 chr4:81714938-81720512:+:L1PA7:REF 11 + L1PA7 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.528958 0.59403 0.694772 0.878378 0.474453 0.057971 0.70438 0.540609 0.693642 0.965517 0.94 1433 1435 chr4 81931746 81937925 chr4:81931746-81937925:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.766626 0.272491 0.505274 0.531066 0.46712 0.681909 0.01287 0.255319 0.716285 0.664372 0.596405 0.77381 1434 1436 chr4 82019561 82022377 chr4:82019561-82022377:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919758 0.616 0.717912 0.780359 0.416076 0.606742 0.0136882 0.544242 0.708758 0.772519 0.785013 0.873846 1435 1437 chr4 82184119 82190281 chr4:82184119-82190281:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.861364 0.692174 0.733615 0.621272 0.730512 0.722449 0.00240964 0.703593 0.61913 0.738889 0.904412 0.725 1436 1438 chr4 82271479 82274851 chr4:82271479-82274851:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated MRC5 0.333333 1437 1439 chr4 83397906 83404039 chr4:83397906-83404039:+:L1PA4:REF 12 + L1PA4 REF full-length HELQ 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.807843 0.816327 0.864 0.927536 0.867725 0.945736 0.160494 0.934066 0.98324 0.871795 0.879195 0.956044 1438 1440 chr4 83952175 83958205 chr4:83952175-83958205:-:L1PA3:REF 12 - L1PA3 REF full-length LOC101928978 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.928972 0.796506 0.901434 0.804219 0.919692 0.717131 0.195149 0.78501 0.988409 0.902669 0.925625 0.961753 1439 1441 chr4 84126785 84132814 chr4:84126785-84132814:+:L1PA2:REF 12 + L1PA2 REF full-length LOC101928978 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0546318 0.931722 0.529479 0.527921 0.00732104 0.902266 0.0170567 0.642624 0.97807 0.650055 0.954031 0.60099 1440 1442 chr4 84285633 84288591 chr4:84285633-84288591:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated LOC101928978 HepG2 0.0 1441 1443 chr4 84298780 84304810 chr4:84298780-84304810:+:L1PA2:REF 9 + L1PA2 REF full-length LOC101928978 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,IMR90,HEK293,H1 0.0456621 0.58427 0.829114 0.81348 0.00373134 0.972414 0.837838 0.964824 0.846561 1442 1444 chr4 84987206 84993388 chr4:84987206-84993388:+:L1PA4:REF 12 + L1PA4 REF full-length WDFY3-AS2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918646 0.851406 0.954165 0.977744 0.904776 0.782242 0.0486044 0.959894 0.977234 0.962729 0.931361 0.964797 1443 1445 chr4 85043345 85049688 chr4:85043345-85049688:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.830508 0.583333 0.431373 0.645985 0.666667 0.288889 0.0 1.0 0.942029 0.36036 0.611111 1.0 1444 1446 chr4 85160656 85166963 chr4:85160656-85166963:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880952 0.0197368 0.611111 0.8 0.855422 0.015625 0.0 0.840909 0.965278 0.48913 0.826923 0.848485 1445 1447 chr4 85500717 85506879 chr4:85500717-85506879:-:L1PA6:REF 1 - L1PA6 REF full-length ARHGAP24 MRC5 0.75 1446 1448 chr4 85622099 85628225 chr4:85622099-85628225:-:L1PA4:REF 1 - L1PA4 REF full-length ARHGAP24 MRC5 0.903226 1447 1449 chr4 85661518 85667643 chr4:85661518-85667643:-:L1PA3:REF 11 - L1PA3 REF full-length ARHGAP24 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.88764 0.735043 0.930233 0.871264 0.962025 0.714286 0.960526 0.974026 0.815789 0.940476 0.985294 1448 1450 chr4 86070390 86076419 chr4:86070390-86076419:-:L1PA2:REF 11 - L1PA2 REF full-length MAPK10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.2 0.915751 0.938462 0.890671 0.0410256 0.886905 0.0714286 0.888112 0.936652 0.944444 0.916388 1449 1451 chr4 86134671 86140696 chr4:86134671-86140696:+:L1PA3:REF 12 + L1PA3 REF full-length MAPK10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.802161 0.549176 0.888448 0.901311 0.935897 0.948498 0.0236172 0.881967 0.927242 0.929234 0.948886 0.902133 1450 1452 chr4 86168071 86171346 chr4:86168071-86171346:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated MAPK10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906883 0.623277 0.772414 0.939602 0.878583 0.96861 0.0562347 0.811138 0.967033 0.887043 0.875289 0.959641 1451 1453 chr4 86191592 86194206 chr4:86191592-86194206:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated MAPK10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.892857 0.0356537 0.586907 0.911735 0.863636 0.950704 0.0153061 0.954918 0.963983 0.824468 0.779264 0.966292 1452 1454 chr4 86654381 86657369 chr4:86654381-86657369:-:L1P1:REF 1 - L1P1 REF 3prime-truncated PTPN13 HepG2 0.515152 1453 1455 chr4 87347103 87353146 chr4:87347103-87353146:-:L1HS:REF 11 - L1HS REF full-length HSD17B11 2102Ep,HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.44375 0.970013 0.987727 0.965928 0.976395 0.959234 0.850166 0.984579 0.970455 0.962211 0.974722 1454 1456 chr4 87486929 87489548 chr4:87486929-87489548:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated SPARCL1 MRC5 0.0 1455 1457 chr4 87710373 87716399 chr4:87710373-87716399:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.186483 0.908291 0.903009 0.920038 0.946553 0.867525 0.0357143 0.406156 0.984744 0.886388 0.959119 0.970628 1456 1458 chr4 88870166 88876304 chr4:88870166-88876304:+:L1PA6:REF 12 + L1PA6 REF full-length FAM13A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.949318 0.749585 0.957371 0.976503 0.940928 0.976526 0.896956 0.872229 0.97799 0.968254 0.981503 0.969868 1457 1459 chr4 88919559 88925734 chr4:88919559-88925734:+:L1PA3:REF 12 + L1PA3 REF full-length FAM13A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.938865 0.87068 0.940722 0.972048 0.97955 0.948864 0.938517 0.967153 0.979412 0.970149 0.962418 0.964684 1458 1460 chr4 89856130 89857102 chr4:89856130-89857102:+:L1P1:REF 6 + L1P1 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HCT116,IMR90 0.884615 0.0289855 0.916667 0.936508 1.0 0.76 1459 1461 chr4 90152884 90159024 chr4:90152884-90159024:-:L1PA3:REF 5 - L1PA3 REF full-length CCSER1 HepG2,MRC5,HEK293T,HCT116,IMR90 0.870968 0.856604 0.857143 0.989362 0.889908 1460 1462 chr4 90407649 90411965 chr4:90407649-90411965:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated CCSER1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.915636 0.484288 0.727866 0.74973 0.934066 0.951613 0.00296296 0.971631 0.975395 0.772043 0.924757 0.942699 1461 1463 chr4 91437491 91443691 chr4:91437491-91443691:+:L1HS:REF 12 + L1HS REF full-length CCSER1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.888988 0.855302 0.748957 0.786872 0.929231 0.862884 0.00935454 0.845869 0.986903 0.796694 0.829026 0.94825 1462 1464 chr4 91541227 91545455 chr4:91541227-91545455:-:L1PA5:REF 12 - L1PA5 REF full-length CCSER1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.658858 0.169421 0.373096 0.424976 0.52426 0.330275 0.00677201 0.761021 0.983607 0.460317 0.276438 0.843318 1463 1465 chr4 91786024 91792049 chr4:91786024-91792049:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.100129 0.0154534 0.327535 0.754353 0.00853659 0.771023 0.0470588 0.318795 0.559979 0.358039 0.0159611 0.146503 1464 1466 chr4 91978211 91984413 chr4:91978211-91984413:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.17358 0.757523 0.812523 0.864611 0.892657 0.794118 0.0752625 0.933762 0.973148 0.858526 0.845799 0.96779 1465 1467 chr4 92078686 92085126 chr4:92078686-92085126:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878049 0.0555556 0.607143 0.613139 0.717949 0.529412 0.166667 0.95 0.953488 0.76 0.586207 1.0 1466 1468 chr4 92916365 92922491 chr4:92916365-92922491:-:L1PA4:REF 12 - L1PA4 REF full-length GRID2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902174 0.255605 0.572727 0.555725 0.858586 0.727891 0.0106007 0.785124 0.95 0.467005 0.742972 0.939597 1467 1469 chr4 92938563 92944694 chr4:92938563-92944694:-:L1PA4:REF 12 - L1PA4 REF full-length GRID2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90641 0.175373 0.590034 0.737138 0.828664 0.799443 0.00403226 0.942913 0.97541 0.66005 0.738562 0.928832 1468 1470 chr4 93589053 93595080 chr4:93589053-93595080:-:L1PA3:REF 12 - L1PA3 REF full-length GRID2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.781365 0.389498 0.652991 0.677536 0.56766 0.722513 0.00519481 0.609898 0.841871 0.768642 0.496774 0.829314 1469 1471 chr4 93608283 93614338 chr4:93608283-93614338:-:L1HS:REF 12 - L1HS REF full-length GRID2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.228875 0.763207 0.840157 0.851712 0.920712 0.881356 0.0246098 0.761103 0.975713 0.894624 0.90445 0.902439 1470 1472 chr4 93638307 93644337 chr4:93638307-93644337:-:L1HS:REF 10 - L1HS REF full-length GRID2 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.0740979 0.746829 0.80722 0.863636 0.878307 0.0114247 0.926099 0.966667 0.864198 0.876838 1471 1473 chr4 93676798 93682944 chr4:93676798-93682944:+:L1PA3:REF 11 + L1PA3 REF full-length GRID2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.798354 0.529597 0.722366 0.849293 0.934759 0.826237 0.805962 0.977724 0.838302 0.868326 0.97401 1472 1474 chr4 93927898 93933215 chr4:93927898-93933215:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.807692 0.00675676 0.25 0.167488 0.230769 0.0540541 0.0864198 0.0731707 0.891089 0.102041 0.150685 0.918367 1473 1475 chr4 94098904 94105047 chr4:94098904-94105047:+:L1PA3:REF 4 + L1PA3 REF full-length HepG2,MRC5,HEK293T,HCT116 0.540541 0.520833 0.885906 0.818182 1474 1476 chr4 94309125 94315291 chr4:94309125-94315291:-:L1PA4:REF 12 - L1PA4 REF full-length HPGDS 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863445 0.76338 0.827869 0.840544 0.734914 0.791667 0.481481 0.942982 0.988701 0.853333 0.860681 0.930041 1475 1477 chr4 94835758 94841785 chr4:94835758-94841785:-:L1PA3:REF 12 - L1PA3 REF full-length BMPR1B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0731707 0.949062 0.855738 0.945372 0.0188849 0.815436 0.0112676 0.200658 0.938193 0.919298 0.933333 0.926174 1476 1478 chr4 95133878 95140064 chr4:95133878-95140064:-:L1PA5:REF 12 - L1PA5 REF full-length BMPR1B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929339 0.894793 0.916667 0.962913 0.973005 0.89911 0.0670241 0.97561 0.913165 0.950292 0.975177 0.965087 1477 1479 chr4 95171232 95177256 chr4:95171232-95177256:-:L1PA3:REF 12 - L1PA3 REF full-length UNC5C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887446 0.786055 0.862515 0.967614 0.98 0.753463 0.614743 0.911079 0.972067 0.951368 0.968404 0.977049 1478 1480 chr4 95791404 95797509 chr4:95791404-95797509:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910053 0.15 0.522556 0.604027 0.756554 0.179487 0.0225564 0.887324 0.976562 0.464286 0.835294 0.936364 1479 1481 chr4 95914759 95920788 chr4:95914759-95920788:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.581615 0.656749 0.736234 0.766922 0.879905 0.735894 0.0547863 0.936095 0.934732 0.839919 0.856942 0.884906 1480 1482 chr4 96409195 96415225 chr4:96409195-96415225:-:L1PA3:REF 10 - L1PA3 REF full-length LINC02267 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.564935 0.715232 0.813492 0.821162 0.767606 0.0692308 0.891667 0.923445 0.806452 0.727273 1481 1483 chr4 97560897 97566581 chr4:97560897-97566581:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated STPG2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885284 0.74189 0.759813 0.822134 0.864796 0.726225 0.00990099 0.955631 0.979401 0.788632 0.834278 0.967816 1482 1484 chr4 97633479 97639503 chr4:97633479-97639503:+:L1PA3:REF 12 + L1PA3 REF full-length STPG2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0498161 0.894568 0.841345 0.866907 0.319662 0.736578 0.0210035 0.973001 0.980361 0.848794 0.914932 0.944353 1483 1485 chr4 97736223 97742374 chr4:97736223-97742374:+:L1PA3:REF 11 + L1PA3 REF full-length STPG2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.915493 0.382353 0.744 0.752026 0.740741 0.656566 0.016129 0.917355 0.696629 0.741935 0.938776 1484 1486 chr4 97777927 97784080 chr4:97777927-97784080:+:L1PA5:REF 12 + L1PA5 REF full-length STPG2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.795666 0.219178 0.476261 0.476727 0.700157 0.0824373 0.00408163 0.912536 0.97449 0.521898 0.536449 0.925 1485 1487 chr4 97903598 97905807 chr4:97903598-97905807:+:L1PA3:REF 11 + L1PA3 REF 3prime-truncated STPG2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.122796 0.60395 0.644016 0.624581 0.0578313 0.523364 0.0222222 0.962162 0.972328 0.607817 0.727749 1486 1488 chr4 98018021 98024143 chr4:98018021-98024143:-:L1PA4:REF 8 - L1PA4 REF full-length STPG2 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,H1 0.752 0.391667 0.55 0.601942 0.377193 0.92 0.95 0.949153 1487 1489 chr4 98592435 98598463 chr4:98592435-98598463:-:L1HS:REF 11 - L1HS REF full-length TSPAN5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.467921 0.844048 0.985141 0.984541 0.736462 0.820225 0.322887 0.977516 0.9866 0.987013 0.951846 Gardner_2017:1 1488 1490 chr4 99114079 99117819 chr4:99114079-99117819:-:L1P1:REF 8 - L1P1 REF 3prime-truncated LOC100507053 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90 0.817021 0.866337 0.813559 0.961644 0.899329 0.762238 0.950355 0.844156 1489 1491 chr4 99492128 99498275 chr4:99492128-99498275:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.920588 0.915468 0.569002 0.815534 0.6375 0.426573 0.00609756 0.956349 0.962687 0.780488 0.471875 0.957143 1490 1492 chr4 99765432 99771462 chr4:99765432-99771462:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909091 0.871451 0.876391 0.944889 0.916807 0.892086 0.227249 0.697419 0.987291 0.881434 0.949192 0.970913 1491 1493 chr4 99792655 99798764 chr4:99792655-99798764:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902405 0.698095 0.717857 0.877863 0.848101 0.648294 0.0290381 0.88668 0.966507 0.845638 0.788 0.882845 1492 1494 chr4 100000524 100006553 chr4:100000524-100006553:-:L1PA2:REF 11 - L1PA2 REF full-length LOC256880 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.155932 0.799363 0.953901 0.958333 0.908629 0.666667 0.114286 0.93007 0.970588 0.945455 0.928571 1493 1495 chr4 100043522 100049465 chr4:100043522-100049465:-:L1PA3:REF 12 - L1PA3 REF full-length LOC256880 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.945946 0.411875 0.909886 0.877248 0.866111 0.713622 0.0838041 0.94105 0.986851 0.896321 0.91636 0.943574 1494 1496 chr4 101405667 101411695 chr4:101405667-101411695:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.190972 0.866426 0.888 0.924276 0.900862 0.00862069 0.826389 0.951852 0.919192 0.747475 0.958042 1495 1497 chr4 101744142 101744458 chr4:101744142-101744458:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878515 0.407927 0.749614 0.767043 0.824296 0.833167 0.00413907 0.973764 0.91342 0.671815 0.924921 0.958546 1496 1498 chr4 102204930 102210958 chr4:102204930-102210958:-:L1PA2:REF 6 - L1PA2 REF full-length 2102Ep,BJ,MRC5,HEK293T,K562,HCT116 0.522727 0.733333 0.808989 0.79646 0.0377358 0.939655 1497 1499 chr4 102374729 102380899 chr4:102374729-102380899:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.754075 0.713235 0.587156 0.713337 0.833792 0.904306 0.0314319 0.622772 0.904486 0.690958 0.920792 0.835132 1498 1500 chr4 103250265 103256290 chr4:103250265-103256290:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0682708 0.423002 0.821217 0.812142 0.391629 0.738648 0.00432366 0.931567 0.979959 0.82242 0.864946 0.713115 1499 1501 chr4 104321484 104327628 chr4:104321484-104327628:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.794233 0.204765 0.484577 0.611285 0.483101 0.0445434 0.0100629 0.572139 0.88 0.579655 0.645333 0.912371 1500 1502 chr4 104687024 104692901 chr4:104687024-104692901:-:L1PA2:REF 12 - L1PA2 REF full-length CXXC4-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0902724 0.745965 0.830923 0.857596 0.838255 0.602662 0.0964143 0.974199 0.979433 0.901768 0.8875 0.932961 1501 1503 chr4 104786988 104793014 chr4:104786988-104793014:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.151369 0.777278 0.645353 0.763889 0.730796 0.457831 0.0126283 0.919687 0.889744 0.762011 0.738793 0.855357 1502 1504 chr4 105307236 105313391 chr4:105307236-105313391:-:L1PA2:REF 12 - L1PA2 REF full-length TET2-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883117 0.647273 0.80531 0.851852 0.731579 0.584615 0.00340136 0.877273 0.952681 0.859649 0.893082 0.924731 1503 1505 chr4 105408931 105413479 chr4:105408931-105413479:+:L1PA6:REF 1 + L1PA6 REF full-length PPA2 MRC5 0.00140449 1504 1506 chr4 105729743 105735830 chr4:105729743-105735830:-:L1PA5:REF 12 - L1PA5 REF full-length GSTCD 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.917857 0.965517 0.974414 0.984914 0.964435 0.962264 0.943841 0.943463 0.968234 0.929539 0.96789 0.961661 1505 1507 chr4 105860130 105866235 chr4:105860130-105866235:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.9117 0.955237 0.963168 0.982466 0.91774 0.977925 0.627246 0.906946 0.987976 0.976277 0.986322 0.971193 1506 1508 chr4 106119954 106121104 chr4:106119954-106121104:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated TBCK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.462606 0.982529 0.889462 0.977676 0.907883 0.970771 0.725225 0.340541 0.854189 0.971119 0.968698 0.968268 1507 1509 chr4 106213354 106219380 chr4:106213354-106219380:+:L1PA3:REF 12 + L1PA3 REF full-length TBCK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.416875 0.986034 0.959529 0.984214 0.583175 0.981503 0.965431 0.78921 0.986294 0.931774 0.977901 0.970894 1508 1510 chr4 106571057 106577070 chr4:106571057-106577070:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.155405 0.851978 0.939645 0.834535 0.968579 0.699205 0.0277946 0.921793 0.985075 0.899272 0.94172 0.922687 1509 1511 chr4 106935103 106941147 chr4:106935103-106941147:+:L1PA2:REF 12 + L1PA2 REF full-length DKK2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.587786 0.731002 0.866717 0.804308 0.803375 0.507128 0.0175277 0.528809 0.977407 0.761269 0.863864 0.956723 1510 1512 chr4 107672082 107678199 chr4:107672082-107678199:+:L1PA4:REF 12 + L1PA4 REF full-length PAPSS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.817102 0.863151 0.871166 0.874489 0.962457 0.93658 0.748628 0.904523 0.784569 0.920516 0.965961 0.867647 1511 1513 chr4 107956731 107962823 chr4:107956731-107962823:+:L1PA5:REF 6 + L1PA5 REF full-length CYP2U1 2102Ep,BJ,MRC5,HEK293T,K562,IMR90 0.654321 0.928571 0.94958 0.862069 0.159091 0.909091 1512 1514 chr4 108435420 108441589 chr4:108435420-108441589:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.858333 0.00704225 0.408333 0.852018 0.75 0.0222222 0.158416 0.662651 0.836066 0.666667 0.4 0.934426 1513 1515 chr4 108503121 108509236 chr4:108503121-108509236:+:L1PA7:REF 10 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293,H1 0.826389 0.434783 0.69697 0.894118 0.726496 0.0606061 0.835979 0.820513 0.715517 0.887755 1514 1516 chr4 109327158 109327160 chr4:109327158-109327160:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip5779,1KGP:L1_umary_LINE1_922,Philippe:EXP_ID_0984 HCT116 0.863301 Beck_2010:36.0 Rodriguez-Martin_2020:27 1515 1517 chr4 109775045 109781152 chr4:109775045-109781152:+:L1PA5:REF 12 + L1PA5 REF full-length CFI 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.835443 0.965167 0.847953 0.861196 0.876471 0.53913 0.704819 0.956395 0.967914 0.852381 0.965587 0.981818 1516 1518 chr4 109934344 109939674 chr4:109934344-109939674:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated EGF 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909677 0.336343 0.66092 0.885978 0.954955 0.496689 0.164706 0.939516 0.976378 0.747423 0.903509 0.968354 1517 1519 chr4 110409693 110411445 chr4:110409693-110411445:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0984503 0.941623 0.870712 0.849146 0.00817439 0.865225 0.280749 0.00966184 0.0186747 0.877138 0.913812 0.158696 1518 1520 chr4 110690112 110693684 chr4:110690112-110693684:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0905563 0.747899 0.870968 0.934653 0.964657 0.668224 0.0536723 0.917706 0.977931 0.855967 0.978599 0.94686 1519 1521 chr4 110757482 110763634 chr4:110757482-110763634:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905109 0.248744 0.724315 0.835605 0.874835 0.210084 0.00345423 0.66998 0.961194 0.791667 0.929889 0.924399 1520 1522 chr4 110870809 110876821 chr4:110870809-110876821:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0588235 0.653404 0.9275 0.961278 0.973935 0.514862 0.0992415 0.803306 0.985542 0.95497 0.98028 0.898131 1521 1523 chr4 111147043 111153194 chr4:111147043-111153194:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929825 0.361111 0.702265 0.809524 0.718182 0.738462 0.0153846 0.744444 0.837449 0.842105 0.757282 0.8125 1522 1524 chr4 111336943 111342946 chr4:111336943-111342946:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.133391 0.789505 0.961283 0.943802 0.0223933 0.740541 0.00889248 0.870824 0.987986 0.805169 0.925865 0.918367 1523 1525 chr4 111377903 111384069 chr4:111377903-111384069:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.879237 0.703039 0.92272 0.94742 0.934122 0.614786 0.0118483 0.823529 0.979079 0.817857 0.935632 0.963899 1524 1526 chr4 111626287 111628940 chr4:111626287-111628940:-:L1PA7:REF 8 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,IMR90,HEK293 0.818182 0.533333 0.9 1.0 1.0 0.933333 0.9 0.9 1525 1527 chr4 111707816 111707818 chr4:111707816-111707818:+:L1HS:NONREF 2 + L1HS KNR euL1db:mrip5789,1KGP:L1_umary_LINE1_928,Philippe:EXP_ID_0985 HepG2,MRC5 0.869298 0.914784 Philippe_2016:1,Rodriguez-Martin_2020:6,Tubio_2014:3 1526 1528 chr4 111894801 111900831 chr4:111894801-111900831:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0553685 0.792581 0.812479 0.784212 0.88284 0.8 0.0204593 0.787757 0.947428 0.748266 0.8839 0.940511 Brouha_2003:0.1 1527 1529 chr4 112575290 112581425 chr4:112575290-112581425:+:L1PA4:REF 12 + L1PA4 REF full-length ZGRF1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.930862 0.975781 0.973732 0.959976 0.955611 0.980583 0.915423 0.906667 0.98237 0.966463 0.970624 0.9701 1528 1530 chr4 113424514 113430701 chr4:113424514-113430701:-:L1PA4:REF 4 - L1PA4 REF full-length HepG2,MRC5,HEK293T,IMR90 0.725 0.951311 0.897727 0.84375 1529 1531 chr4 113489138 113495167 chr4:113489138-113495167:-:L1PA2:REF 12 - L1PA2 REF full-length CAMK2D 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.951359 0.98467 0.989905 0.986594 0.97299 0.961679 0.0236542 0.981086 0.985017 0.928882 0.983755 0.982786 1530 1532 chr4 113852142 113858298 chr4:113852142-113858298:+:L1PA3:REF 7 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.850649 0.829268 0.947368 0.98913 0.916667 0.982609 0.93007 1531 1533 chr4 115523614 115525735 chr4:115523614-115525735:-:L1PA8:REF 1 - L1PA8 REF 3prime-truncated MRC5 0.625 1532 1534 chr4 116405696 116411731 chr4:116405696-116411731:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.105405 0.545618 0.763062 0.800639 0.801339 0.822891 0.077635 0.78112 0.980564 0.816891 0.891796 0.962494 1533 1535 chr4 116775043 116781055 chr4:116775043-116781055:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.255025 0.30086 0.576231 0.705133 0.659138 0.663158 0.018043 0.665856 0.96937 0.553047 0.710781 0.919729 1534 1536 chr4 117921983 117927986 chr4:117921983-117927986:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.501933 0.518681 0.700571 0.731775 0.2208 0.491319 0.0383081 0.444934 0.981183 0.825986 0.736256 0.954286 1535 1537 chr4 119061901 119068062 chr4:119061901-119068062:-:L1PA3:REF 12 - L1PA3 REF full-length SYNPO2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.367901 0.585198 0.904444 0.951111 0.0268456 0.901163 0.0115607 0.186047 0.918719 0.933086 0.941463 0.458333 1536 1538 chr4 119073638 119079786 chr4:119073638-119079786:+:L1PA4:REF 8 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,HEK293 0.933673 0.874214 0.917431 0.960688 0.711443 0.0 0.860215 0.696203 1537 1539 chr4 119251686 119255882 chr4:119251686-119255882:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated USP53 MRC5 0.336508 1538 1540 chr4 119948726 119954758 chr4:119948726-119954758:-:L1HS:REF 12 - L1HS REF full-length LINC02502 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0586448 0.824179 0.958786 0.978729 0.970642 0.802924 0.0228616 0.95968 0.980642 0.964569 0.97726 0.956338 1539 1541 chr4 120256079 120256778 chr4:120256079-120256778:-:L1PA2:REF 11 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.0772627 0.350063 0.841962 0.909156 0.0100877 0.575053 0.372252 0.969959 0.885892 0.909036 0.470169 1540 1542 chr4 120460346 120464352 chr4:120460346-120464352:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.466667 0.0 0.375 0.568182 0.818182 0.0 0.0 0.12 0.636364 0.515625 0.681319 0.7 1541 1543 chr4 120508813 120515250 chr4:120508813-120515250:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.810811 0.0266204 0.731579 0.812643 0.899306 0.323276 0.00945626 0.105919 0.977153 0.711628 0.754717 0.953901 1542 1544 chr4 120645591 120648485 chr4:120645591-120648485:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0995575 0.819988 0.912304 0.955527 0.0546713 0.809935 0.0274779 0.569136 0.978831 0.89603 0.971751 0.90512 1543 1545 chr4 120943774 120948151 chr4:120943774-120948151:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.783333 0.164474 0.666667 0.565068 0.857143 0.220588 0.0136986 0.78125 0.956897 0.636364 0.946429 0.875 1544 1546 chr4 121000000 121002150 chr4:121000000-121002150:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.792453 0.0173913 0.542857 0.555369 0.805907 0.0125786 0.0 0.64539 0.719764 0.385965 0.729358 0.845455 1545 1547 chr4 121616231 121622378 chr4:121616231-121622378:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.827586 0.13555 0.619377 0.58132 0.863636 0.1 0.0166667 0.642336 0.783972 0.771186 0.838542 0.87619 1546 1548 chr4 122110092 122116118 chr4:122110092-122116118:+:L1PA3:REF 1 + L1PA3 REF full-length HCT116 0.875 1547 1549 chr4 122492915 122499068 chr4:122492915-122499068:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919273 0.72058 0.853215 0.925105 0.811192 0.651927 0.668898 0.917073 0.972127 0.875883 0.871698 0.952798 1548 1550 chr4 122939633 122945796 chr4:122939633-122945796:-:L1PA4:REF 12 - L1PA4 REF full-length SPATA5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.95432 0.982736 0.987595 0.980716 0.977064 0.91844 0.968833 0.024359 0.981281 0.983165 0.979218 0.982792 1549 1551 chr4 123000000 123004460 chr4:123000000-123004460:-:L1P1:REF 12 - L1P1 REF 3prime-truncated SPATA5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.932624 0.963964 0.962238 0.983617 0.195146 0.941725 0.902574 0.905063 0.983471 0.944321 0.947282 0.953975 1550 1552 chr4 123330661 123337152 chr4:123330661-123337152:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.858209 0.911602 0.781818 0.948925 0.808081 0.755814 0.636364 0.970588 0.925 0.882353 0.772059 0.931507 1551 1553 chr4 123721384 123727541 chr4:123721384-123727541:+:L1PA3:REF 12 + L1PA3 REF full-length LINC01091 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.666667 0.690265 0.876033 0.909441 0.868914 0.585635 0.0226415 0.92437 0.959016 0.880342 0.889655 0.968 1552 1554 chr4 124361247 124367393 chr4:124361247-124367393:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.927536 0.562092 0.925926 0.973684 0.94 0.962963 0.0123457 1.0 1.0 0.785047 0.890244 1.0 1553 1555 chr4 125150267 125152292 chr4:125150267-125152292:-:L1PA8:REF 12 - L1PA8 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.931818 0.0151515 0.59375 0.899563 0.671875 0.909091 0.0 1.0 0.959459 0.854167 0.6 0.892857 1554 1556 chr4 126860856 126867000 chr4:126860856-126867000:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.823764 0.26775 0.963399 0.981325 0.78636 0.561433 0.810967 0.654172 0.974684 0.876881 0.797763 0.918367 1555 1557 chr4 126928255 126934284 chr4:126928255-126934284:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.21 0.739313 0.962761 0.96555 0.90191 0.512048 0.77278 0.774566 0.980827 0.958796 0.855145 0.96882 1556 1558 chr4 127020568 127026555 chr4:127020568-127026555:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.663158 0.837012 0.958333 0.975196 0.890921 0.774942 0.592834 0.872587 0.960404 0.937337 0.845853 0.97227 1557 1559 chr4 127062560 127068603 chr4:127062560-127068603:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.703769 0.515634 0.773522 0.808017 0.872727 0.643148 0.429624 0.0465116 0.839489 0.926591 0.82173 0.813154 1558 1560 chr4 127458138 127464617 chr4:127458138-127464617:-:L1PA7:REF 11 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.787356 0.00735294 0.619883 0.744344 0.583333 0.0240964 0.449664 0.946121 0.725 0.383838 0.865979 1559 1561 chr4 127472690 127478829 chr4:127472690-127478829:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90522 0.362196 0.795918 0.903163 0.876238 0.587234 0.205529 0.787565 0.978535 0.865741 0.717949 0.959459 1560 1562 chr4 127588930 127594962 chr4:127588930-127594962:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.681713 0.513853 0.900538 0.951931 0.917927 0.725894 0.080872 0.859786 0.962436 0.926566 0.943511 0.958067 1561 1563 chr4 127650220 127656245 chr4:127650220-127656245:-:L1PA2:REF 12 - L1PA2 REF full-length INTU 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.495981 0.513498 0.948553 0.973634 0.930057 0.966717 0.435808 0.941176 0.979664 0.967062 0.954589 0.914894 1562 1564 chr4 127676608 127682756 chr4:127676608-127682756:+:L1PA3:REF 12 + L1PA3 REF full-length INTU 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.950495 0.97868 0.977845 0.970772 0.975904 0.986047 0.879121 0.963359 0.976974 0.981595 0.98374 0.975845 1563 1565 chr4 128213789 128219796 chr4:128213789-128219796:+:L1PA2:REF 12 + L1PA2 REF full-length LARP1B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921099 0.973362 0.969668 0.979848 0.968934 0.970884 0.957413 0.976403 0.977099 0.961343 0.971311 0.976342 1564 1566 chr4 128895551 128901681 chr4:128895551-128901681:+:L1PA4:REF 11 + L1PA4 REF full-length SCLT1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.871304 0.96645 0.966292 0.981453 0.935241 0.974178 0.941532 0.973765 0.965517 0.954023 0.963542 1565 1567 chr4 129023547 129029691 chr4:129023547-129029691:+:L1PA4:REF 12 + L1PA4 REF full-length SCLT1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.916381 0.97903 0.978613 0.983646 0.958929 0.975069 0.968525 0.976791 0.985477 0.97541 0.970614 0.970588 1566 1568 chr4 129121171 129126976 chr4:129121171-129126976:-:L1PA8:REF 1 - L1PA8 REF 3prime-truncated C4orf33 MRC5 0.722222 1567 1569 chr4 129715499 129721626 chr4:129715499-129721626:-:L1PA5:REF 12 - L1PA5 REF full-length LINC02466 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.913669 0.828309 0.823353 0.827437 0.948864 0.866667 0.0223881 0.867882 0.973966 0.825806 0.768879 0.961538 1568 1570 chr4 129853905 129859930 chr4:129853905-129859930:+:L1PA3:REF 12 + L1PA3 REF full-length LINC02465 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.097973 0.359155 0.718894 0.76746 0.545193 0.228643 0.0186688 0.875111 0.907589 0.829187 0.628949 0.936192 1569 1571 chr4 130046202 130052342 chr4:130046202-130052342:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.850686 0.858593 0.691489 0.677895 0.919154 0.457093 0.00840336 0.830675 0.977061 0.697674 0.783613 0.959057 1570 1572 chr4 131260491 131260493 chr4:131260491-131260493:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip5874,1KGP:L1_umary_LINE1_965,Philippe:EXP_ID_1004 2102Ep,HeLaS3 0.169111 0.914209 1571 1573 chr4 131352393 131358409 chr4:131352393-131358409:+:L1PA3:REF 3 + L1PA3 REF full-length HepG2,MRC5,HEK293T 0.611111 0.777778 0.738095 1572 1574 chr4 132631286 132637304 chr4:132631286-132637304:-:L1PA2:REF 12 - L1PA2 REF full-length LINC01256 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.750441 0.443868 0.634437 0.792256 0.88914 0.785141 0.0183585 0.81941 0.852751 0.743725 0.755027 0.824957 1573 1575 chr4 132944445 132950433 chr4:132944445-132950433:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.845865 0.81876 0.821681 0.843339 0.919595 0.837321 0.00373483 0.96763 0.96003 0.845329 0.817724 0.957192 1574 1576 chr4 133330359 133334605 chr4:133330359-133334605:-:L1PA7:REF 10 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.7 0.0487805 0.246231 0.3174 0.764706 0.35514 0.0147059 0.964912 0.349206 0.368421 1575 1577 chr4 133733942 133739952 chr4:133733942-133739952:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.900877 0.765041 0.874521 0.891773 0.93778 0.859416 0.17515 0.955017 0.981947 0.908524 0.865918 0.980047 1576 1578 chr4 134207778 134213927 chr4:134207778-134213927:+:L1PA3:REF 12 + L1PA3 REF full-length PABPC4L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909548 0.284075 0.9343 0.789876 0.96309 0.847134 0.226902 0.958271 0.98066 0.864198 0.82419 0.974206 1577 1579 chr4 134923018 134929206 chr4:134923018-134929206:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895425 0.226852 0.810345 0.573864 0.952991 0.702381 0.030303 0.916667 0.985294 0.537879 0.643192 0.921569 1578 1580 chr4 135178140 135183747 chr4:135178140-135183747:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.938487 0.806904 0.825199 0.855889 0.960656 0.888211 0.0473214 0.802998 0.98227 0.92803 0.847966 0.955908 1579 1581 chr4 135447537 135453551 chr4:135447537-135453551:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0460405 0.769679 0.820939 0.836744 0.943639 0.889503 0.0158311 0.962246 0.990909 0.857909 0.877665 0.940526 1580 1582 chr4 135467974 135474423 chr4:135467974-135474423:-:L1PA3:REF 1 - L1PA3 REF full-length MRC5 0.463158 1581 1583 chr4 136293494 136299546 chr4:136293494-136299546:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.147346 0.903516 0.831193 0.880342 0.948577 0.943114 0.0283541 0.946442 0.939458 0.835455 0.927781 0.960762 Brouha_2003:6.2 Rodriguez-Martin_2020:22 1582 1584 chr4 137350580 137357055 chr4:137350580-137357055:+:L1PA8:REF 12 + L1PA8 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890411 0.0181818 0.894366 0.824675 0.84375 0.304348 0.0 0.345238 0.946309 0.92 0.788618 0.931034 1583 1585 chr4 137496278 137500000 chr4:137496278-137500000:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.354033 0.771525 0.941505 0.967362 0.0685062 0.946223 0.127263 0.949209 0.98513 0.984742 0.381379 0.773784 1584 1586 chr4 138480635 138480957 chr4:138480635-138480957:-:L1PA5:REF 9 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,H1 0.90571 0.512772 0.845606 0.959128 0.872437 0.516539 0.792553 0.968586 0.983471 1585 1587 chr4 138881278 138887439 chr4:138881278-138887439:-:L1PA3:REF 12 - L1PA3 REF full-length LOC105377448 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.944656 0.887122 0.942918 0.967548 0.977215 0.956332 0.774194 0.996337 0.986395 0.947368 0.961219 0.977528 1586 1588 chr4 140413342 140419363 chr4:140413342-140419363:+:L1PA2:REF 10 + L1PA2 REF full-length CLGN 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,H1 0.259259 0.918114 0.805195 0.959368 0.969466 0.87395 0.914894 0.964912 0.868263 0.96 1587 1589 chr4 140782680 140788847 chr4:140782680-140788847:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.879173 0.720192 0.758883 0.818125 0.715586 0.861728 0.0104348 0.967864 0.966002 0.823944 0.820031 0.95 1588 1590 chr4 141367012 141368858 chr4:141367012-141368858:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906504 0.0 0.847222 0.76049 0.286207 0.903509 0.0706522 0.721212 0.949833 0.787234 0.484163 0.880597 1589 1591 chr4 141377781 141383925 chr4:141377781-141383925:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.92233 0.383244 0.944091 0.891213 0.755224 0.912977 0.136842 0.882736 0.963609 0.971781 0.936493 0.970359 1590 1592 chr4 141503846 141510060 chr4:141503846-141510060:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.927273 0.461538 0.954545 0.958005 0.804965 0.970297 0.0560748 0.0530973 0.952381 0.989899 0.820359 0.955224 1591 1593 chr4 141549289 141555444 chr4:141549289-141555444:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.572222 0.473684 0.715328 0.769504 0.476744 0.496124 0.054878 0.296296 0.70303 0.647059 0.639456 0.670213 1592 1594 chr4 141877346 141883376 chr4:141877346-141883376:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.160393 0.844917 0.918885 0.966164 0.836326 0.926719 0.132286 0.974979 0.971289 0.953795 0.937992 0.893004 1593 1595 chr4 142253344 142259388 chr4:142253344-142259388:+:L1PA3:REF 12 + L1PA3 REF full-length INPP4B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896234 0.821951 0.93865 0.896832 0.830995 0.965875 0.0111732 0.945545 0.896 0.954606 0.882265 0.914286 1594 1596 chr4 142648199 142654383 chr4:142648199-142654383:+:L1PA6:REF 1 + L1PA6 REF full-length INPP4B MRC5 0.0 1595 1597 chr4 142990876 142997042 chr4:142990876-142997042:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.764641 0.357947 0.810861 0.752711 0.536946 0.539642 0.0027894 0.819398 0.854545 0.836096 0.505634 0.826873 1596 1598 chr4 143100259 143106289 chr4:143100259-143106289:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.281195 0.702454 0.862947 0.910818 0.890447 0.762386 0.0354767 0.958028 0.976477 0.898696 0.882012 0.944751 1597 1599 chr4 143166456 143172590 chr4:143166456-143172590:+:L1PA4:REF 1 + L1PA4 REF full-length LOC105377623 MRC5 0.714286 1598 1600 chr4 143659114 143665240 chr4:143659114-143665240:-:L1PA3:REF 12 - L1PA3 REF full-length FREM3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.903392 0.610717 0.926348 0.904762 0.778638 0.796834 0.0483729 0.873926 0.984221 0.916509 0.908389 0.94831 1599 1601 chr4 143672418 143674177 chr4:143672418-143674177:-:L1PA5:REF 9 - L1PA5 REF 3prime-truncated FREM3 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,HCT116,IMR90,H1 0.868852 0.459574 0.628125 0.80787 0.296296 0.0166667 0.764205 0.584821 0.8 1600 1602 chr4 144391554 144397691 chr4:144391554-144397691:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910059 0.318078 0.789203 0.754153 0.85336 0.510345 0.0165017 0.649351 0.987047 0.823308 0.935438 0.962901 1601 1603 chr4 144434630 144441108 chr4:144434630-144441108:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.772727 0.028754 0.241803 0.414847 0.84589 0.0612245 0.015 0.651899 0.980695 0.436364 0.873626 0.920732 1602 1604 chr4 144768558 144774706 chr4:144768558-144774706:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.428 0.371663 0.875536 0.808799 0.76431 0.682635 0.0359712 0.0514286 0.968051 0.915966 0.963855 0.94898 1603 1605 chr4 144791618 144796881 chr4:144791618-144796881:+:L1P1:REF 4 + L1P1 REF 3prime-truncated HepG2,MRC5,HEK293T,HCT116 0.306122 0.665217 0.493333 0.815385 1604 1606 chr4 144809658 144810951 chr4:144809658-144810951:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0454545 0.79565 0.782774 0.797361 0.803685 0.682857 0.0116861 0.853372 0.893564 0.820257 0.863384 0.530864 1605 1607 chr4 144836726 144842477 chr4:144836726-144842477:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.835017 0.0399386 0.550336 0.515419 0.625571 0.0310881 0.0153846 0.759804 0.968523 0.62844 0.734082 0.936709 1606 1608 chr4 145240809 145243951 chr4:145240809-145243951:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated HepG2 0.0869565 1607 1609 chr4 145369388 145375369 chr4:145369388-145375369:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.391576 0.774748 0.737282 0.876756 0.899306 0.567398 0.0284858 0.958005 0.965444 0.706294 0.935127 0.683582 1608 1610 chr4 146304143 146304145 chr4:146304143-146304145:+:L1HS:NONREF 9 + L1HS KNR euL1db:mrip5922,1KGP:L1_umary_LINE1_985,Philippe:EXP_ID_1012 SLC10A7 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90 0.0794702 0.451957 0.698052 0.916019 0.909091 0.809955 0.887531 0.922775 0.908832 Beck_2010:0.0 1609 1611 chr4 146350018 146356052 chr4:146350018-146356052:+:L1PA2:REF 12 + L1PA2 REF full-length SLC10A7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.121729 0.903414 0.740116 0.903557 0.0244917 0.889029 0.89666 0.80692 0.196907 0.829665 0.0296248 0.475728 1610 1612 chr4 146552929 146559080 chr4:146552929-146559080:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.924731 0.568627 0.772152 0.835583 0.785714 0.688742 0.0315789 0.812 0.96477 0.864583 0.796992 0.904348 1611 1613 chr4 146663286 146663613 chr4:146663286-146663613:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.124318 0.745208 0.715351 0.829093 0.953336 0.659401 0.0243161 0.93934 0.940998 0.810243 0.936642 0.89487 1612 1614 chr4 147255044 147256750 chr4:147255044-147256750:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.970297 0.390625 0.924731 0.495549 0.868687 0.923077 0.0 0.507937 0.979167 0.50365 0.915888 0.931034 1613 1615 chr4 147292169 147298625 chr4:147292169-147298625:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911058 0.388664 0.812775 0.969957 0.903002 0.926174 0.00980392 0.934498 0.984749 0.956667 0.921348 0.97006 1614 1616 chr4 147465925 147471941 chr4:147465925-147471941:-:L1PA4:REF 9 - L1PA4 REF full-length EDNRA 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,H1 0.890158 0.649297 0.87451 0.951751 0.910853 0.0236814 0.868313 0.981897 0.959484 1615 1617 chr4 148082263 148086453 chr4:148082263-148086453:+:L1PA7:REF 6 + L1PA7 REF 3prime-truncated NR3C2 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116 0.93617 0.706667 0.971831 0.978648 0.909091 0.968085 1616 1618 chr4 148317874 148323904 chr4:148317874-148323904:-:L1PA2:REF 12 - L1PA2 REF full-length NR3C2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0398551 0.847668 0.627096 0.928928 0.225585 0.776637 0.0267041 0.939768 0.984877 0.927749 0.976356 0.834816 1617 1619 chr4 149088594 149094734 chr4:149088594-149094734:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.924227 0.334167 0.784549 0.954737 0.482637 0.374866 0.00961538 0.806897 0.985604 0.929972 0.66539 0.951694 1618 1620 chr4 149468022 149474136 chr4:149468022-149474136:+:L1PA5:REF 1 + L1PA5 REF full-length IQCM MRC5 0.2 1619 1621 chr4 149848204 149854224 chr4:149848204-149854224:+:L1PA3:REF 7 + L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,MCF7,HCT116,HEK293 0.45 0.758454 0.941589 0.767568 0.732824 0.947115 0.944444 1620 1622 chr4 149915524 149921557 chr4:149915524-149921557:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.224009 0.773944 0.922256 0.94574 0.0395634 0.872441 0.0244969 0.857837 0.95925 0.931532 0.940909 0.96325 1621 1623 chr4 150502570 150507814 chr4:150502570-150507814:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated LRBA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906888 0.973251 0.970286 0.964333 0.95679 0.985507 0.958199 0.975836 0.985261 0.977444 0.984934 0.940447 1622 1624 chr4 151511295 151517459 chr4:151511295-151517459:+:L1PA3:REF 12 + L1PA3 REF full-length FAM160A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923032 0.906239 0.838296 0.915972 0.90443 0.92924 0.184932 0.890311 0.914573 0.802267 0.90254 0.944196 1623 1625 chr4 151811653 151811655 chr4:151811653-151811655:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip5940,1KGP:L1_umary_LINE1_998,Philippe:EXP_ID_1016 MCF7 0.734904 Rodriguez-Martin_2020:17,Tubio_2014:1 1624 1626 chr4 153978080 153984223 chr4:153978080-153984223:-:L1PA4:REF 2 - L1PA4 REF full-length K562,IMR90 0.00763359 0.757353 1625 1627 chr4 154108480 154114958 chr4:154108480-154114958:+:L1PA3:REF 1 + L1PA3 REF full-length MRC5 0.307692 1626 1628 chr4 154891689 154898150 chr4:154891689-154898150:+:L1PA8:REF 12 + L1PA8 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.835443 0.880597 0.625 0.727778 0.630137 0.113636 0.0 0.945946 0.951807 0.525424 0.916667 0.840909 1627 1629 chr4 156284540 156290599 chr4:156284540-156290599:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.14554 0.80838 0.971218 0.975379 0.942627 0.726208 0.00960384 0.758449 0.985369 0.973716 0.955326 0.904701 1628 1630 chr4 156367269 156373295 chr4:156367269-156373295:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898835 0.63001 0.957188 0.98013 0.481048 0.859155 0.0162602 0.130781 0.98 0.968391 0.968514 0.961577 1629 1631 chr4 157157345 157163450 chr4:157157345-157163450:-:L1PA5:REF 10 - L1PA5 REF full-length GLRB 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293,H1 0.95 0.025 0.925 0.972678 0.934783 0.0 1.0 0.928571 0.95 1.0 1630 1632 chr4 157174892 157180916 chr4:157174892-157180916:-:L1PA3:REF 11 - L1PA3 REF full-length GLRB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.68125 0.209877 0.878173 0.91443 0.497674 0.604651 0.163462 0.0 0.901099 0.864865 0.986755 1631 1633 chr4 157986118 157986120 chr4:157986118-157986120:-:L1HS:NONREF 3 - L1HS KNR euL1db:mrip5955,1KGP:L1_umary_LINE1_1008,Philippe:EXP_ID_1017 HepG2,BJ,HCT116 0.917738 0.94 0.984733 1632 1634 chr4 158084240 158090272 chr4:158084240-158090272:-:L1PA2:REF 9 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293 0.368421 0.91018 0.927711 0.673712 0.58 0.00653595 0.576389 0.944223 0.757576 1633 1635 chr4 158362555 158368702 chr4:158362555-158368702:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.907994 0.491142 0.918171 0.892884 0.524552 0.881612 0.100478 0.0159405 0.867925 0.906767 0.78087 0.946292 1634 1636 chr4 158544449 158550599 chr4:158544449-158550599:-:L1PA4:REF 12 - L1PA4 REF full-length RXFP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898148 0.185714 0.811189 0.83241 0.544776 0.788618 0.197115 0.288703 0.965839 0.760479 0.816754 0.925 1635 1637 chr4 159528029 159534173 chr4:159528029-159534173:-:L1PA5:REF 1 - L1PA5 REF full-length MRC5 0.240458 1636 1638 chr4 159709512 159715562 chr4:159709512-159715562:-:L1PA3:REF 9 - L1PA3 REF full-length LINC02233 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293 0.623616 0.911255 0.677305 0.764278 0.782328 0.037415 0.661538 0.868932 0.807229 1637 1639 chr4 159804371 159810375 chr4:159804371-159810375:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.703746 0.710009 0.662051 0.593378 0.457052 0.0462963 0.0283019 0.0341297 0.939282 0.712667 0.709736 0.897187 1638 1640 chr4 160001351 160005462 chr4:160001351-160005462:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated MRC5 0.183333 1639 1641 chr4 160120217 160126215 chr4:160120217-160126215:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.144231 0.773709 0.742491 0.779958 0.405192 0.985386 0.0222635 0.965539 0.980434 0.809731 0.878505 0.97593 1640 1642 chr4 160151167 160157326 chr4:160151167-160157326:-:L1PA4:REF 7 - L1PA4 REF full-length HepG2,BJ,HeLaS3,MCF7,HCT116,IMR90,H1 0.186761 0.445415 0.864407 0.841727 0.971429 0.617391 0.956757 1641 1643 chr4 160574032 160580085 chr4:160574032-160580085:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.148298 0.771692 0.770708 0.796676 0.747041 0.72895 0.0106383 0.974257 0.986593 0.833089 0.80625 0.966967 1642 1644 chr4 160746380 160748536 chr4:160746380-160748536:+:L1P2:REF 8 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,HEK293 0.75 0.025 0.25 0.190909 0.0588235 0.846154 1.0 0.230769 1643 1645 chr4 162965871 162970335 chr4:162965871-162970335:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.80602 0.0171674 0.421053 0.543561 0.289286 0.346154 0.0 0.920354 1.0 0.575758 0.610442 0.934911 1644 1646 chr4 163000000 163005177 chr4:163000000-163005177:-:L1P3:REF 12 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.922297 0.231579 0.472678 0.42973 0.217523 0.112903 0.004 0.901163 0.980296 0.439189 0.570048 0.950617 1645 1647 chr4 163207006 163212968 chr4:163207006-163212968:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.487141 0.883585 0.826531 0.862437 0.735758 0.693038 0.839662 0.949239 0.942094 0.872917 0.913478 0.84359 1646 1648 chr4 163632232 163638253 chr4:163632232-163638253:+:L1PA2:REF 12 + L1PA2 REF full-length MARCH1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.779435 0.605607 0.677681 0.837515 0.46936 0.798771 0.0153722 0.776119 0.967677 0.785124 0.767504 0.966276 1647 1649 chr4 163719033 163725152 chr4:163719033-163725152:-:L1PA5:REF 12 - L1PA5 REF full-length MARCH1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887302 0.412565 0.603651 0.790921 0.428814 0.916449 0.0147783 0.559194 0.913288 0.782609 0.707885 0.913462 1648 1650 chr4 164100748 164106778 chr4:164100748-164106778:+:L1PA2:REF 10 + L1PA2 REF full-length MARCH1 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293,H1 0.219512 0.638231 0.74031 0.82358 0.646552 0.0304054 0.950096 0.839142 0.879808 0.935135 1649 1651 chr4 164141807 164147832 chr4:164141807-164147832:+:L1PA3:REF 8 + L1PA3 REF full-length MARCH1 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,HEK293 0.617188 0.365385 0.517986 0.635611 0.203704 0.0555556 0.880952 0.583333 1650 1652 chr4 164241613 164247620 chr4:164241613-164247620:+:L1PA2:REF 5 + L1PA2 REF full-length MARCH1 HepG2,MRC5,MCF7,IMR90,H1 0.815789 0.726174 0.744292 0.809091 0.863636 1651 1653 chr4 164350749 164356776 chr4:164350749-164356776:+:L1PA2:REF 12 + L1PA2 REF full-length MARCH1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0459653 0.692049 0.769768 0.807102 0.502099 0.23673 0.0464871 0.138537 0.938477 0.817161 0.779314 0.945808 1652 1654 chr4 164553492 164559523 chr4:164553492-164559523:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.679376 0.471885 0.75741 0.81201 0.554527 0.660944 0.0442478 0.760999 0.8445 0.661844 0.86106 0.944262 1653 1655 chr4 166374373 166375365 chr4:166374373-166375365:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.892523 0.0183486 0.414013 0.230769 0.110204 0.243119 0.0101351 0.0892193 0.914583 0.24031 0.0737463 0.878594 1654 1656 chr4 166449405 166449678 chr4:166449405-166449678:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856115 0.864887 0.826479 0.828079 0.747454 0.918972 0.0267983 0.755796 0.896673 0.830022 0.863173 0.902703 1655 1657 chr4 166463312 166469345 chr4:166463312-166469345:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.735921 0.428644 0.645656 0.684328 0.661905 0.851064 0.0266458 0.496151 0.808029 0.712452 0.746466 0.741018 1656 1658 chr4 166569976 166576007 chr4:166569976-166576007:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0846774 0.735935 0.841658 0.823067 0.772753 0.856209 0.0216509 0.332766 0.97869 0.880399 0.878498 0.936937 1657 1659 chr4 166755895 166761908 chr4:166755895-166761908:+:L1HS:REF 6 + L1HS REF full-length SPOCK3 2102Ep,BJ,MRC5,HeLaS3,K562,MCF7 0.486884 0.539051 0.716338 0.891892 0.0107143 0.797153 1658 1660 chr4 166850455 166851634 chr4:166850455-166851634:+:L1HS:REF 12 + L1HS REF 3prime-truncated SPOCK3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.900197 0.514164 0.721186 0.719947 0.559461 0.846575 0.0083682 0.499514 0.98067 0.726402 0.811966 0.954401 1659 1661 chr4 167055311 167058094 chr4:167055311-167058094:+:L1PA3:REF 6 + L1PA3 REF 3prime-truncated SPOCK3 2102Ep,MRC5,HEK293T,HeLaS3,HCT116,H1 0.931677 0.781046 0.617978 0.828947 0.938776 0.97619 1660 1662 chr4 167276135 167282161 chr4:167276135-167282161:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0836473 0.650402 0.787879 0.810427 0.643237 0.943377 0.0431491 0.851399 0.97494 0.825784 0.922909 0.923944 1661 1663 chr4 167343516 167349561 chr4:167343516-167349561:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.212358 0.54921 0.723514 0.78511 0.594088 0.887417 0.0163701 0.716998 0.984625 0.839404 0.885025 0.940635 1662 1664 chr4 167857881 167863903 chr4:167857881-167863903:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.169312 0.6 0.744681 0.846698 0.547703 0.804196 0.0546875 0.349558 0.906433 0.838462 0.873684 0.956044 1663 1665 chr4 168441989 168448038 chr4:168441989-168448038:+:L1PA2:REF 12 + L1PA2 REF full-length DDX60L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.490208 0.730167 0.927729 0.982985 0.862795 0.929185 0.0522209 0.898317 0.973765 0.980287 0.876144 0.943377 1664 1666 chr4 168491946 168491948 chr4:168491946-168491948:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip5991,Philippe:EXP_ID_1023 PALLD IMR90 0.89781 1665 1667 chr4 169448685 169453420 chr4:169448685-169453420:+:L1PA6:REF 1 + L1PA6 REF 3prime-truncated NEK1 MRC5 0.480088 1666 1668 chr4 169515501 169521532 chr4:169515501-169521532:-:L1HS:REF 12 - L1HS REF full-length NEK1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.374528 0.984458 0.981616 0.983883 0.96986 0.966805 0.948217 0.970202 0.983983 0.983587 0.981213 0.967123 1667 1669 chr4 170263278 170269442 chr4:170263278-170269442:-:L1PA4:REF 12 - L1PA4 REF full-length LINC01612 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906832 0.80603 0.656958 0.72609 0.369598 0.496314 0.00507614 0.961165 0.975709 0.797721 0.582168 0.952522 1668 1670 chr4 170431382 170437424 chr4:170431382-170437424:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.422414 0.631579 0.78534 0.625743 0.483221 0.730435 0.00304414 0.836257 0.918919 0.832117 0.664835 1669 1671 chr4 170505054 170511194 chr4:170505054-170511194:-:L1PA5:REF 7 - L1PA5 REF full-length HepG2,BJ,MRC5,HEK293T,K562,IMR90,HEK293 0.666667 0.615556 0.660682 0.538889 0.0119048 0.741667 0.644144 1670 1672 chr4 170639225 170645417 chr4:170639225-170645417:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.824369 0.522644 0.649293 0.58371 0.339888 0.531401 0.0195556 0.723101 0.940341 0.616959 0.496982 0.921649 1671 1673 chr4 170782980 170789002 chr4:170782980-170789002:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.219477 0.857561 0.774063 0.761993 0.0295643 0.638682 0.0137845 0.972277 0.757047 0.75945 0.722045 1672 1674 chr4 171758830 171764612 chr4:171758830-171764612:+:L1P2:REF 9 + L1P2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293 0.533333 0.113095 0.282051 0.275542 0.490196 0.315789 0.0229885 0.311111 0.22449 1673 1675 chr4 171903130 171909158 chr4:171903130-171909158:+:L1PA3:REF 10 + L1PA3 REF full-length GALNTL6 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.0847458 0.667742 0.842593 0.802985 0.242105 0.336449 0.986842 0.78534 0.911765 0.923077 1674 1676 chr4 173603062 173609186 chr4:173603062-173609186:-:L1PA4:REF 9 - L1PA4 REF full-length HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,H1 0.598049 0.541104 0.807192 0.316642 0.177083 0.0892532 0.840756 0.643617 0.693009 1675 1677 chr4 173616934 173619370 chr4:173616934-173619370:-:L1PA6:REF 11 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.619048 0.0357143 0.0645161 0.15 0.145833 0.0625 0.375 0.217391 0.157895 0.190476 0.769231 1676 1678 chr4 173619375 173623022 chr4:173619375-173623022:-:L1PA7:REF 3 - L1PA7 REF 3prime-truncated MRC5,HEK293T,HEK293 0.0 0.5 0.0 1677 1679 chr4 173785907 173792044 chr4:173785907-173792044:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891026 0.509375 0.722589 0.929478 0.922861 0.545455 0.0652529 0.62459 0.874505 0.842593 0.849906 0.934426 1678 1680 chr4 173962946 173969035 chr4:173962946-173969035:-:L1PA5:REF 3 - L1PA5 REF full-length HepG2,HCT116,H1 0.645714 0.988235 0.966667 1679 1681 chr4 174411896 174418039 chr4:174411896-174418039:-:L1PA4:REF 12 - L1PA4 REF full-length MIR4276 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.912752 0.240385 0.512718 0.649785 0.758621 0.968481 0.827402 0.821809 0.957704 0.55814 0.84981 0.930851 1680 1682 chr4 174778462 174784478 chr4:174778462-174784478:+:L1PA2:REF 12 + L1PA2 REF full-length GLRA3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.089317 0.814611 0.731972 0.783575 0.0483871 0.809231 0.0748201 0.672711 0.980562 0.787519 0.936906 0.946328 1681 1683 chr4 175019740 175025751 chr4:175019740-175025751:+:L1PA3:REF 10 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.534884 0.795031 0.779412 0.872483 0.842105 0.0631579 0.956311 0.936027 0.746479 0.820359 1682 1684 chr4 176691786 176692112 chr4:176691786-176692112:+:L1PA3:REF 3 + L1PA3 REF 3prime-truncated VEGFC HepG2,HeLaS3,HCT116 0.858586 0.918182 0.954545 1683 1685 chr4 177017217 177023392 chr4:177017217-177023392:+:L1PA6:REF 7 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,IMR90 0.877358 0.243421 0.902985 0.869136 0.434211 0.961111 0.878788 1684 1686 chr4 177133448 177133959 chr4:177133448-177133959:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.89697 0.249012 0.914286 0.959615 0.581522 0.596899 0.0 0.757143 0.974359 0.936782 0.855491 0.976471 1685 1687 chr4 178015030 178021062 chr4:178015030-178021062:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.237119 0.793831 0.799203 0.857654 0.598011 0.371951 0.213043 0.637397 0.990389 0.81048 0.81014 0.950336 1686 1688 chr4 178636688 178642035 chr4:178636688-178642035:+:L1P3:REF 11 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.9 0.0238095 0.359375 0.376384 0.433333 0.104167 0.636364 0.973684 0.544118 0.576923 0.966667 1687 1689 chr4 179636522 179642706 chr4:179636522-179642706:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.76412 0.180082 0.552033 0.838485 0.728601 0.197183 0.0400391 0.7383 0.904027 0.927083 0.651282 0.949523 1688 1690 chr4 180468117 180472388 chr4:180468117-180472388:+:L1PA7:REF 10 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293,H1 0.852941 0.0166667 0.230769 0.326923 0.823529 0.0 0.96 0.3125 0.875 0.9 1689 1691 chr4 181408889 181414915 chr4:181408889-181414915:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.199374 0.785751 0.850631 0.889219 0.970067 0.825605 0.0260211 0.969608 0.977586 0.914662 0.966554 0.940995 1690 1692 chr4 181926712 181933174 chr4:181926712-181933174:+:L1PA7:REF 4 + L1PA7 REF full-length HepG2,BJ,MRC5,HCT116 0.0333333 0.55 0.902174 0.35 1691 1693 chr4 182356716 182362873 chr4:182356716-182362873:-:L1PA3:REF 12 - L1PA3 REF full-length TENM3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880889 0.548252 0.813142 0.92663 0.877367 0.877737 0.0514604 0.89243 0.86445 0.914504 0.886975 0.908752 1692 1694 chr4 182779057 182785080 chr4:182779057-182785080:-:L1PA2:REF 12 - L1PA2 REF full-length TENM3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.955006 0.887368 0.943944 0.938684 0.820542 0.94685 0.0301811 0.914365 0.95659 0.967273 0.83208 0.973577 1693 1695 chr4 184208227 184214253 chr4:184208227-184214253:+:L1PA3:REF 6 + L1PA3 REF full-length ENPP6 HepG2,MRC5,HEK293T,K562,HCT116,HEK293 0.68125 0.9175 0.357143 0.546218 0.979798 0.972727 1694 1696 chr4 186110393 186116420 chr4:186110393-186116420:-:L1PA2:REF 12 - L1PA2 REF full-length FAM149A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.172883 0.529796 0.782887 0.911784 0.962387 0.832928 0.278059 0.863074 0.931768 0.884892 0.972773 0.843042 1695 1697 chr4 187050521 187056650 chr4:187050521-187056650:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.961039 0.771024 0.849714 0.954154 0.881944 0.673748 0.055082 0.96657 0.974343 0.928065 0.928516 0.97568 1696 1698 chr4 187402177 187408891 chr4:187402177-187408891:-:L1PA7:REF 3 - L1PA7 REF full-length LOC339975 HepG2,BJ,MRC5 0.564103 0.8 0.920792 1697 1699 chr4 187856785 187862920 chr4:187856785-187862920:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.820755 0.589916 0.737892 0.851197 0.779167 0.660793 0.00377358 0.768786 0.94081 0.938931 0.876448 0.96063 1698 1700 chr4 188558269 188564287 chr4:188558269-188564287:-:L1PA2:REF 12 - L1PA2 REF full-length LINC01060 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.955025 0.872818 0.899118 0.908647 0.848533 0.955202 0.033534 0.967113 0.978792 0.93149 0.945854 0.949679 1699 1701 chr4 189137085 189143104 chr4:189137085-189143104:+:L1HS:REF 5 + L1HS REF full-length HepG2,BJ,HeLaS3,IMR90,H1 0.854953 0.874302 0.76087 0.957976 0.968051 1700 1702 chr4 189239994 189246154 chr4:189239994-189246154:-:L1PA6:REF 3 - L1PA6 REF full-length 2102Ep,MRC5,HCT116 0.9 0.280702 0.612903 1701 1703 chr5 60128 66259 chr5:60128-66259:-:L1PA6:REF 6 - L1PA6 REF full-length HepG2,MRC5,HEK293T,HeLaS3,K562,HEK293 0.19697 0.621762 0.168831 0.333333 0.0 0.76 1702 1704 chr5 1709818 1715835 chr5:1709818-1715835:+:L1PA3:REF 12 + L1PA3 REF full-length MIR4277 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.246553 0.796209 0.373435 0.380136 0.79014 0.80773 0.242408 0.915774 0.95024 0.202147 0.918953 0.383973 1703 1705 chr5 3439025 3445063 chr5:3439025-3445063:+:L1PA3:REF 12 + L1PA3 REF full-length LINC01019 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.915134 0.388815 0.823904 0.758528 0.587579 0.585799 0.261552 0.684018 0.741674 0.843212 0.776827 0.960059 1704 1706 chr5 3667322 3670373 chr5:3667322-3670373:-:L1PA7:REF 9 - L1PA7 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.193548 0.333333 0.297297 0.0 0.0 0.0 0.125 0.0 0.454545 1705 1707 chr5 4500001 4502372 chr5:4500001-4502372:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.244161 0.655051 0.768608 0.719573 0.4256 0.611003 0.0134844 0.419663 0.851531 0.752515 0.863232 0.937459 1706 1708 chr5 4615428 4621437 chr5:4615428-4621437:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.0704698 0.667897 0.669811 0.710832 0.15438 0.553814 0.0090834 0.234925 0.688623 0.741722 0.835526 1707 1709 chr5 6646413 6649889 chr5:6646413-6649889:-:L1P2:REF 10 - L1P2 REF 3prime-truncated SRD5A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293 0.918367 0.993506 0.978022 0.913534 0.985507 0.978723 0.514286 0.979381 0.818182 0.983193 1708 1710 chr5 6966278 6967323 chr5:6966278-6967323:+:L1PA2:REF 11 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0498382 0.762533 0.697732 0.557814 0.705238 0.0178336 0.456464 0.797357 0.837432 0.795852 0.843296 1709 1711 chr5 7170548 7176731 chr5:7170548-7176731:+:L1PA3:REF 1 + L1PA3 REF full-length MRC5 0.4875 1710 1712 chr5 7193769 7199795 chr5:7193769-7199795:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.368103 0.614384 0.66844 0.619839 0.330275 0.443954 0.0138143 0.641638 0.680392 0.692982 0.774674 0.808194 1711 1713 chr5 7230590 7236733 chr5:7230590-7236733:+:L1PA3:REF 9 + L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293 0.824859 0.323171 0.445238 0.0680628 0.298701 0.0135135 0.519608 0.291971 0.441558 1712 1714 chr5 8084215 8090244 chr5:8084215-8090244:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.822999 0.345714 0.635236 0.682612 0.433071 0.00138122 0.148773 0.838235 0.719731 0.747283 0.931408 1713 1715 chr5 8730856 8736988 chr5:8730856-8736988:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887789 0.370327 0.959276 0.964545 0.0539084 0.161333 0.0134357 0.235294 0.257749 0.973373 0.68254 0.933333 1714 1716 chr5 10002400 10005167 chr5:10002400-10005167:+:L1PA5:REF 5 + L1PA5 REF 3prime-truncated 2102Ep,MRC5,HEK293T,K562,HEK293 0.837398 0.890503 0.0862275 0.00186916 0.783937 1715 1717 chr5 10011064 10017180 chr5:10011064-10017180:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.722892 0.0078125 0.851485 0.948187 0.0199005 0.0307692 0.0228571 0.692308 0.882927 0.88 0.660287 0.877358 1716 1718 chr5 10093295 10093942 chr5:10093295-10093942:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905882 0.0376016 0.801812 0.65528 0.141569 0.129649 0.00361011 0.85023 0.94697 0.727027 0.747748 0.939551 1717 1719 chr5 10779977 10781229 chr5:10779977-10781229:+:L1P2:REF 11 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.85034 0.76431 0.809816 0.91863 0.33 0.565 0.29064 0.870748 0.950739 0.791444 0.905172 1718 1720 chr5 11666769 11673042 chr5:11666769-11673042:-:L1PA7:REF 12 - L1PA7 REF full-length CTNND2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.77208 0.0309091 0.358779 0.315502 0.012766 0.0543735 0.00824176 0.914286 0.354396 0.440789 0.736702 0.965217 1719 1721 chr5 13416497 13422525 chr5:13416497-13422525:+:L1HS:REF 7 + L1HS REF full-length 2102Ep,BJ,MRC5,HeLaS3,K562,MCF7,H1 0.183743 0.810253 0.827027 0.883123 0.0198366 0.884462 0.901639 1720 1722 chr5 15271411 15277431 chr5:15271411-15277431:+:L1PA3:REF 3 + L1PA3 REF full-length LINC02149 MRC5,HeLaS3,HCT116 0.907029 0.551724 0.8 1721 1723 chr5 15291930 15298100 chr5:15291930-15298100:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.846529 0.359542 0.875269 0.80431 0.111868 0.311215 0.00574713 0.642942 0.374549 0.84375 0.38932 0.940043 1722 1724 chr5 15396123 15398085 chr5:15396123-15398085:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.939138 0.789658 0.956391 0.933594 0.628614 0.730225 0.0302083 0.906008 0.864147 0.911765 0.91944 0.960739 1723 1725 chr5 15906515 15912550 chr5:15906515-15912550:-:L1HS:REF 12 - L1HS REF full-length FBXL7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.141945 0.854369 0.970037 0.981447 0.733212 0.589041 0.0393352 0.886027 0.852411 0.973841 0.883764 0.785714 1724 1726 chr5 16335410 16341440 chr5:16335410-16341440:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0548263 0.629157 0.824226 0.789165 0.278607 0.735436 0.036115 0.717643 0.892102 0.8198 0.827255 0.879953 1725 1727 chr5 17749600 17755756 chr5:17749600-17755756:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.852165 0.40625 0.688073 0.63804 0.399254 0.815371 0.0043592 0.870276 0.97379 0.791574 0.771178 0.886454 1726 1728 chr5 19161336 19167360 chr5:19161336-19167360:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0759003 0.823436 0.831384 0.804423 0.499232 0.753323 0.337577 0.967448 0.981647 0.844444 0.856068 0.940165 1727 1729 chr5 21107412 21113430 chr5:21107412-21113430:+:L1PA2:REF 10 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.0777559 0.861111 0.83105 0.821522 0.548157 0.790323 0.0733945 0.681159 0.795455 0.825503 1728 1730 chr5 21207622 21207624 chr5:21207622-21207624:+:L1HS:NONREF 4 + L1HS KNR euL1db:mrip6145,1KGP:L1_umary_LINE1_1067 MRC5,K562,MCF7,H1 0.889567 0.0184397 0.955679 0.987805 Beck_2010:6.0 1729 1731 chr5 24654721 24660895 chr5:24654721-24660895:-:L1PA6:REF 12 - L1PA6 REF full-length CDH10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905303 0.0239234 0.211009 0.185738 0.576792 0.775385 0.00383142 0.441406 0.953642 0.348485 0.306818 0.872 1730 1732 chr5 25077653 25083685 chr5:25077653-25083685:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.105034 0.588954 0.797732 0.856538 0.0082397 0.01608 0.158759 0.983966 0.837662 0.857335 0.95616 1731 1733 chr5 25113737 25119754 chr5:25113737-25119754:-:L1PA2:REF 12 - L1PA2 REF full-length LINC02228 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.231394 0.65933 0.773494 0.855346 0.717183 0.87434 0.115236 0.417058 0.951066 0.78626 0.653251 0.891525 1732 1734 chr5 25378529 25384556 chr5:25378529-25384556:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.289673 0.46654 0.730287 0.799781 0.710089 0.867423 0.0219895 0.55761 0.964249 0.771028 0.816644 0.856729 1733 1735 chr5 28798790 28804814 chr5:28798790-28804814:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.585034 0.719048 0.796954 0.860674 0.796407 0.865116 0.377622 0.771429 0.884323 0.798817 0.847934 0.95302 1734 1736 chr5 29191266 29192108 chr5:29191266-29192108:-:L1PA2:REF 11 - L1PA2 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.21133 0.744373 0.745988 0.086737 0.137219 0.0201541 0.246677 0.982278 0.643074 0.512383 0.668571 1735 1737 chr5 30359046 30365384 chr5:30359046-30365384:-:L1PA5:REF 7 - L1PA5 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HEK293 0.0859729 0.576923 0.666667 0.0503145 0.807692 0.0104167 0.419847 1736 1738 chr5 30423377 30429507 chr5:30423377-30429507:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.241456 0.453757 0.665142 0.811998 0.397252 0.917539 0.0136687 0.0525978 0.958844 0.82483 0.595552 0.712171 1737 1739 chr5 30496098 30499978 chr5:30496098-30499978:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91 0.930435 0.239669 0.374233 0.00892857 0.866242 0.0 0.848101 0.888889 0.546512 0.281437 1.0 1738 1740 chr5 30817969 30823996 chr5:30817969-30823996:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.239113 0.602218 0.819643 0.934783 0.583381 0.711499 0.0107681 0.595092 0.889313 0.939462 0.837037 0.968788 1739 1741 chr5 32794706 32799584 chr5:32794706-32799584:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated NPR3 MRC5 1.0 1740 1742 chr5 32892857 32899328 chr5:32892857-32899328:-:L1PA7:REF 3 - L1PA7 REF full-length HepG2,MRC5,HEK293 0.0 0.772727 0.666667 1741 1743 chr5 33095903 33102047 chr5:33095903-33102047:-:L1PA4:REF 11 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.949219 0.396648 0.972222 0.967681 0.307692 0.725926 0.00806452 0.943262 0.934343 0.746988 0.961039 1742 1744 chr5 33122370 33128395 chr5:33122370-33128395:+:L1PA2:REF 10 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293 0.719101 0.843389 0.975232 0.975 0.614403 0.833753 0.0243493 0.935211 0.987578 0.914237 1743 1745 chr5 33539828 33546021 chr5:33539828-33546021:+:L1PA6:REF 12 + L1PA6 REF full-length ADAMTS12 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909333 0.671982 0.959459 0.982968 0.634868 0.403922 0.00877193 0.9375 0.848397 0.914634 0.81791 0.901786 1744 1746 chr5 33568655 33574761 chr5:33568655-33574761:+:L1PA3:REF 12 + L1PA3 REF full-length ADAMTS12 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.932401 0.765387 0.918681 0.979455 0.438722 0.443087 0.0130405 0.847081 0.8101 0.953757 0.86291 0.961333 1745 1747 chr5 33797437 33797439 chr5:33797437-33797439:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip6194,1KGP:L1_umary_LINE1_1090,Philippe:EXP_ID_1049 ADAMTS12 BJ 0.982495 Beck_2010:0.0 1746 1748 chr5 34147845 34154031 chr5:34147845-34154031:+:L1HS:REF 12 + L1HS REF full-length C1QTNF3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.112861 0.982095 0.965554 0.982676 0.934761 0.979464 0.945246 0.966667 0.976528 0.955882 0.973437 0.908642 1747 1749 chr5 35075072 35081201 chr5:35075072-35081201:+:L1PA5:REF 11 + L1PA5 REF full-length PRLR 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.876513 0.933333 0.886853 0.411236 0.0968921 0.00756144 0.87619 0.539474 0.835 0.897674 0.771429 1748 1750 chr5 35104255 35110375 chr5:35104255-35110375:+:L1PA5:REF 1 + L1PA5 REF full-length PRLR MRC5 0.39375 1749 1751 chr5 35256058 35262086 chr5:35256058-35262086:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872 0.835106 0.819484 0.734575 0.635071 0.491003 0.00992556 0.954955 0.565702 0.778481 0.923497 0.912821 1750 1752 chr5 35396097 35402235 chr5:35396097-35402235:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.901515 0.693333 0.796296 0.736709 0.311111 0.365385 0.0210526 0.949367 0.823944 0.633803 0.858974 1751 1753 chr5 35494184 35500000 chr5:35494184-35500000:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.947502 0.953593 0.870994 0.842029 0.619315 0.691358 0.00698487 0.90099 0.83925 0.847432 0.92273 0.959514 1752 1754 chr5 35568225 35574246 chr5:35568225-35574246:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.875 0.851518 0.858004 0.82424 0.442177 0.695992 0.0236088 0.922149 0.879903 0.76568 0.770153 0.90175 1753 1755 chr5 35911739 35917876 chr5:35911739-35917876:+:L1PA4:REF 12 + L1PA4 REF full-length CAPSL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873437 0.48675 0.71708 0.718447 0.40176 0.706997 0.00398406 0.826374 0.731123 0.717579 0.905719 0.972145 1754 1756 chr5 36184263 36190366 chr5:36184263-36190366:-:L1PA5:REF 12 - L1PA5 REF full-length SKP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905028 0.976526 0.986631 0.985379 0.958243 0.967442 0.963437 0.975081 0.978313 0.982979 0.973161 0.981818 1755 1757 chr5 36508021 36514170 chr5:36508021-36514170:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.771739 0.923664 0.973214 0.601073 0.942529 0.943775 0.130769 0.936 0.957447 0.961538 0.923913 0.954545 1756 1758 chr5 38169496 38175529 chr5:38169496-38175529:-:L1PA3:REF 12 - L1PA3 REF full-length LINC02107 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873932 0.97845 0.914826 0.907717 0.926702 0.873964 0.159366 0.937605 0.975625 0.917127 0.948231 0.962338 1757 1759 chr5 38625599 38631747 chr5:38625599-38631747:-:L1PA3:REF 12 - L1PA3 REF full-length LIFR-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856989 0.788996 0.847861 0.957447 0.915552 0.933985 0.309293 0.906011 0.972 0.915044 0.921311 0.929204 1758 1760 chr5 39034329 39040476 chr5:39034329-39040476:+:L1PA4:REF 12 + L1PA4 REF full-length RICTOR 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.93262 0.902419 0.968073 0.982851 0.960573 0.978345 0.96633 0.502353 0.979284 0.932136 0.962766 0.982368 1759 1761 chr5 39343059 39349181 chr5:39343059-39349181:+:L1PA5:REF 12 + L1PA5 REF full-length C9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.85468 0.613445 0.693299 0.87234 0.54223 0.787009 0.117444 0.48468 0.911715 0.811715 0.726397 0.864253 1760 1762 chr5 39787652 39793671 chr5:39787652-39793671:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.109621 0.766772 0.952733 0.957239 0.965066 0.0645331 0.968407 0.977617 0.952179 0.881749 0.969613 Rodriguez-Martin_2020:25,Tubio_2014:17 1761 1763 chr5 40162817 40162819 chr5:40162817-40162819:-:L1HS:NONREF 1 - L1HS KNR Philippe:EXP_ID_1053 HepG2 0.0167761 1762 1764 chr5 40468742 40474889 chr5:40468742-40474889:-:L1PA3:REF 1 - L1PA3 REF full-length MRC5 0.016129 1763 1765 chr5 40541305 40547335 chr5:40541305-40547335:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.294521 0.903325 0.934627 0.966851 0.780992 0.956066 0.0174564 0.951175 0.976661 0.968394 0.955338 0.981233 1764 1766 chr5 40565244 40567520 chr5:40565244-40567520:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.643599 0.43741 0.793781 0.575872 0.31392 0.720466 0.00303951 0.697479 0.731749 0.721254 0.69783 0.960526 1765 1767 chr5 41205257 41211396 chr5:41205257-41211396:+:L1PA5:REF 11 + L1PA5 REF full-length C6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.642857 0.70852 0.481481 0.518145 0.398438 0.265306 0.0344828 0.453125 0.85 0.926471 0.668605 1766 1768 chr5 41487919 41494088 chr5:41487919-41494088:-:L1PA3:REF 12 - L1PA3 REF full-length PLCXD3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.699557 0.650169 0.724763 0.756848 0.389864 0.522971 0.0135823 0.696489 0.932573 0.789976 0.771248 0.87551 1767 1769 chr5 42254239 42260389 chr5:42254239-42260389:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911608 0.740331 0.811196 0.768362 0.645745 0.427011 0.0044843 0.767837 0.97166 0.84492 0.844845 0.942149 1768 1770 chr5 42412311 42418555 chr5:42412311-42418555:-:L1PA6:REF 11 - L1PA6 REF full-length GHR 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.713043 0.156522 0.522222 0.459397 0.6 0.00775194 0.020202 0.841121 0.96 0.52 0.8 1769 1771 chr5 42476884 42483030 chr5:42476884-42483030:-:L1PA4:REF 12 - L1PA4 REF full-length GHR 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.933735 0.715488 0.796339 0.77305 0.809278 0.265442 0.00364964 0.941176 0.971731 0.837963 0.835681 0.953307 1770 1772 chr5 42659631 42665759 chr5:42659631-42665759:+:L1PA3:REF 12 + L1PA3 REF full-length GHR 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.731105 0.552632 0.812893 0.622079 0.64375 0.250314 0.0236842 0.537786 0.808652 0.771505 0.681881 0.870504 1771 1773 chr5 42734714 42740780 chr5:42734714-42740780:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.101784 0.848824 0.901763 0.803059 0.686424 0.666933 0.0116279 0.890839 0.977788 0.853147 0.917699 0.926457 1772 1774 chr5 42931680 42937866 chr5:42931680-42937866:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.822938 0.772908 0.803661 0.908836 0.754305 0.779978 0.364312 0.109836 0.934813 0.806647 0.852284 0.874074 1773 1775 chr5 43260613 43266748 chr5:43260613-43266748:-:L1PA5:REF 12 - L1PA5 REF full-length NIM1K 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873773 0.434879 0.803974 0.837857 0.691983 0.776796 0.365253 0.930303 0.960177 0.73224 0.857627 0.964557 1774 1776 chr5 43340769 43344359 chr5:43340769-43344359:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.799114 0.810329 0.830864 0.825397 0.641824 0.812298 0.601907 0.962323 0.973002 0.754875 0.878924 0.911528 1775 1777 chr5 43402548 43408647 chr5:43402548-43408647:+:L1PA5:REF 7 + L1PA5 REF full-length CCL28 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,IMR90 0.4 0.0318471 0.753846 0.851711 0.73913 0.219731 0.563636 1776 1778 chr5 43717953 43723974 chr5:43717953-43723974:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901699 0.909046 0.964874 0.985324 0.845396 0.907048 0.244801 0.959541 0.981646 0.97973 0.950594 0.953704 1777 1779 chr5 44040911 44044131 chr5:44040911-44044131:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880126 0.142268 0.393393 0.832642 0.030303 0.601852 0.00660066 0.935976 0.951567 0.578231 0.0483871 0.818182 1778 1780 chr5 44578944 44584955 chr5:44578944-44584955:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.941297 0.503279 0.671867 0.727695 0.390056 0.77027 0.0184682 0.932091 0.957692 0.7245 0.454925 0.887059 1779 1781 chr5 44668502 44674529 chr5:44668502-44674529:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886387 0.633551 0.666961 0.683755 0.475126 0.94585 0.00857788 0.968906 0.900281 0.668484 0.63922 0.88999 1780 1782 chr5 45346381 45352534 chr5:45346381-45352534:+:L1PA3:REF 11 + L1PA3 REF full-length HCN1 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.6793 0.0228311 0.299606 0.29966 0.0375335 0.00516129 0.298165 0.97449 0.263021 0.221248 0.870732 1781 1783 chr5 45444894 45447243 chr5:45444894-45447243:+:L1P1:REF 12 + L1P1 REF 3prime-truncated HCN1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.759825 0.753119 0.647619 0.665907 0.554639 0.571751 0.0121279 0.523006 0.835125 0.628331 0.762523 0.941889 1782 1784 chr5 45493599 45499615 chr5:45493599-45499615:-:L1PA3:REF 12 - L1PA3 REF full-length HCN1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91592 0.716425 0.724843 0.744437 0.535977 0.600833 0.0319693 0.771835 0.984652 0.791813 0.834261 0.976636 1783 1785 chr5 45580536 45586672 chr5:45580536-45586672:-:L1PA4:REF 12 - L1PA4 REF full-length HCN1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856813 0.566082 0.633333 0.595855 0.410345 0.212219 0.00851789 0.313466 0.971119 0.620588 0.52028 0.95625 1784 1786 chr5 45658440 45664470 chr5:45658440-45664470:+:L1PA2:REF 12 + L1PA2 REF full-length HCN1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.409727 0.731884 0.827404 0.78679 0.599156 0.756322 0.0374593 0.715202 0.965373 0.821519 0.802243 0.927813 1785 1787 chr5 45743085 45749194 chr5:45743085-45749194:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.874419 0.47619 0.602258 0.602484 0.310512 0.379845 0.0163297 0.170108 0.949821 0.611018 0.378205 0.876569 1786 1788 chr5 45786144 45792292 chr5:45786144-45792292:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.804444 0.028169 0.27758 0.282772 0.0128205 0.0588235 0.011583 0.239766 0.855596 0.414286 0.114058 0.764706 1787 1789 chr5 45832860 45838845 chr5:45832860-45838845:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.882507 0.430769 0.506977 0.482428 0.186047 0.328713 0.028169 0.505025 0.935556 0.615385 0.399023 0.776316 1788 1790 chr5 45881229 45887211 chr5:45881229-45887211:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.695652 0.2 0.478873 0.468085 0.0537634 0.130952 0.0 0.160494 0.628205 0.416667 0.219858 0.833333 1789 1791 chr5 50280227 50286251 chr5:50280227-50286251:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.812757 0.450723 0.698813 0.618321 0.661209 0.668076 0.0466019 0.592593 0.951654 0.67378 0.818841 0.928125 1790 1792 chr5 50330069 50336236 chr5:50330069-50336236:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.705195 0.0941658 0.437844 0.390348 0.350158 0.129252 0.0115875 0.963793 0.933128 0.565116 0.688863 0.802083 1791 1793 chr5 50452986 50459008 chr5:50452986-50459008:-:L1PA3:REF 10 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293,H1 0.9 0.02 0.133333 0.338028 0.596154 0.0714286 0.25 0.477273 0.478261 0.791667 1792 1794 chr5 50467523 50471398 chr5:50467523-50471398:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889344 0.181818 0.60274 0.666667 0.684028 0.190141 0.0 0.933628 0.945652 0.733333 0.859649 0.903226 1793 1795 chr5 50483964 50490136 chr5:50483964-50490136:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.807692 0.213376 0.486547 0.361702 0.496454 0.282686 0.002457 0.898089 0.65587 0.455752 0.42485 0.623457 1794 1796 chr5 50494871 50495185 chr5:50494871-50495185:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.604497 0.0161491 0.393404 0.330716 0.388601 0.0362976 0.00410959 0.7331 0.970232 0.557339 0.285523 0.405018 1795 1797 chr5 50596109 50602273 chr5:50596109-50602273:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87589 0.667932 0.778807 0.717587 0.917953 0.275387 0.00703518 0.947106 0.965241 0.88755 0.896552 0.930769 1796 1798 chr5 51250746 51256770 chr5:51250746-51256770:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.582686 0.489122 0.75465 0.690141 0.920851 0.414115 0.0269231 0.610309 0.809045 0.748634 0.885036 0.942478 1797 1799 chr5 51304490 51310641 chr5:51304490-51310641:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.899333 0.346069 0.778191 0.74424 0.898207 0.635957 0.00723589 0.639581 0.881868 0.766484 0.834244 0.923602 1798 1800 chr5 51348667 51354822 chr5:51348667-51354822:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.793578 0.0381579 0.552347 0.311173 0.775891 0.190647 0.00244499 0.332632 0.668033 0.375385 0.696017 0.913462 1799 1801 chr5 51636771 51642771 chr5:51636771-51642771:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.799003 0.15404 0.729275 0.515718 0.943375 0.0765172 0.0364078 0.708904 0.575663 0.527132 0.896802 0.934118 1800 1802 chr5 51785150 51791298 chr5:51785150-51791298:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87069 0.0279146 0.542435 0.497899 0.777429 0.108014 0.00501253 0.593066 0.571734 0.446541 0.600368 0.884 1801 1803 chr5 51951743 51957834 chr5:51951743-51957834:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.874074 0.590909 0.759924 0.763 0.84101 0.224615 0.00581395 0.865823 0.781034 0.701887 0.684404 0.971831 1802 1804 chr5 52086499 52088220 chr5:52086499-52088220:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.715447 0.577666 0.725394 0.703008 0.780388 0.54251 0.0989011 0.841241 0.909222 0.711375 0.638738 0.938242 1803 1805 chr5 52097924 52102941 chr5:52097924-52102941:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.758403 0.010582 0.272727 0.221687 0.397163 0.0294118 0.00879765 0.371134 0.532091 0.169355 0.206972 0.859438 1804 1806 chr5 52970664 52976801 chr5:52970664-52976801:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.86 0.889706 0.82906 0.941748 0.743363 0.945205 0.0253165 0.934211 0.971154 0.979167 0.927928 0.955556 1805 1807 chr5 53141066 53147199 chr5:53141066-53147199:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.931889 0.682018 0.841549 0.970968 0.852665 0.935849 0.441048 0.980769 0.953368 0.909091 0.871901 0.915888 1806 1808 chr5 53267996 53274186 chr5:53267996-53274186:+:L1PA3:REF 4 + L1PA3 REF full-length 2102Ep,HepG2,MRC5,HCT116 0.895833 0.313953 0.916667 0.9 1807 1809 chr5 53660005 53665971 chr5:53660005-53665971:-:L1PA4:REF 12 - L1PA4 REF full-length NDUFS4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929097 0.979882 0.927607 0.987411 0.887679 0.960938 0.967315 0.926961 0.987797 0.924971 0.896705 0.979592 1808 1810 chr5 53750516 53751979 chr5:53750516-53751979:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909091 0.348837 0.828571 0.697368 0.866667 0.025641 0.0 0.8 1.0 0.675 0.847458 1.0 1809 1811 chr5 55012859 55014226 chr5:55012859-55014226:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated LOC102467081 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.759615 0.0220126 0.737778 0.711934 0.158301 0.0217391 0.0236967 0.603448 0.321839 0.583333 0.328704 0.915094 1810 1812 chr5 55075360 55081502 chr5:55075360-55081502:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.844371 0.615748 0.864286 0.8152 0.56087 0.559459 0.0166667 0.594406 0.908451 0.828205 0.867779 0.936963 1811 1813 chr5 55096561 55101301 chr5:55096561-55101301:+:L1P2:REF 12 + L1P2 REF 3prime-truncated GZMA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.838415 0.0350318 0.620072 0.56304 0.539894 0.0211268 0.0119522 0.842593 0.60472 0.555556 0.821138 0.881481 1812 1814 chr5 55803330 55809463 chr5:55803330-55809463:-:L1PA3:REF 12 - L1PA3 REF full-length DDX4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909314 0.643888 0.689698 0.837161 0.80179 0.458128 0.00650195 0.966229 0.957125 0.774359 0.84456 0.937656 1813 1815 chr5 57351496 57357526 chr5:57351496-57357526:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.192429 0.837321 0.888181 0.975073 0.75119 0.923875 0.172959 0.944606 0.98374 0.959893 0.951768 0.936636 1814 1816 chr5 57869385 57870876 chr5:57869385-57870876:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895947 0.686615 0.921917 0.975705 0.80198 0.953026 0.131225 0.978873 0.971429 0.952316 0.967658 0.984475 1815 1817 chr5 57966585 57972749 chr5:57966585-57972749:-:L1PA4:REF 5 - L1PA4 REF full-length HepG2,BJ,HEK293T,K562,HEK293 0.218997 0.856678 0.431611 0.0355872 0.966408 1816 1818 chr5 58215915 58222036 chr5:58215915-58222036:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883008 0.236842 0.879493 0.957173 0.547046 0.95572 0.273333 0.959016 0.987952 0.915254 0.972056 0.946524 1817 1819 chr5 58288061 58294158 chr5:58288061-58294158:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.782037 0.586307 0.826312 0.956948 0.66641 0.906954 0.257024 0.803688 0.918288 0.875486 0.95122 0.965054 1818 1820 chr5 58384174 58390206 chr5:58384174-58390206:+:L1HS:REF 5 + L1HS REF full-length 2102Ep,BJ,MRC5,K562,HCT116 0.910377 0.905906 0.949067 0.0321873 0.966862 Brouha_2003:0.0 Rodriguez-Martin_2020:6 1819 1821 chr5 58536154 58542290 chr5:58536154-58542290:-:L1PA3:REF 12 - L1PA3 REF full-length LINC02108 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.852792 0.520723 0.640514 0.715985 0.414993 0.671835 0.024055 0.591797 0.926537 0.644195 0.751391 0.923333 1820 1822 chr5 58552269 58558283 chr5:58552269-58558283:-:L1PA2:REF 12 - L1PA2 REF full-length LINC02108 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.116608 0.770235 0.716157 0.783688 0.620192 0.735135 0.015873 0.55 0.464646 0.744755 0.845912 0.894958 1821 1823 chr5 59394720 59400744 chr5:59394720-59400744:+:L1PA3:REF 12 + L1PA3 REF full-length PDE4D 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.916872 0.914629 0.826281 0.895273 0.96779 0.875 0.0162037 0.935722 0.882395 0.89125 0.969404 0.977586 1822 1824 chr5 60044367 60050391 chr5:60044367-60050391:-:L1PA3:REF 11 - L1PA3 REF full-length PDE4D 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.822581 0.312253 0.741935 0.727903 0.504808 0.614035 0.00490196 0.581633 0.632 0.753247 0.909091 1823 1825 chr5 60103870 60110024 chr5:60103870-60110024:+:L1PA3:REF 12 + L1PA3 REF full-length PDE4D 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.818328 0.5 0.806804 0.631342 0.337014 0.525328 0.037037 0.349017 0.760618 0.652207 0.839583 0.967507 1824 1826 chr5 60420575 60426695 chr5:60420575-60426695:+:L1PA6:REF 12 + L1PA6 REF full-length PDE4D 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.673684 0.892857 0.732342 0.545822 0.131222 0.375758 0.0275862 0.307143 0.636888 0.586207 0.746032 0.898305 1825 1827 chr5 60570768 60576107 chr5:60570768-60576107:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.96748 0.984536 0.905063 0.958425 0.909091 1.0 0.637681 0.984375 0.840278 1.0 0.977778 0.957143 1826 1828 chr5 60860389 60866437 chr5:60860389-60866437:+:L1PA3:REF 1 + L1PA3 REF full-length ERCC8 HepG2 0.547445 1827 1829 chr5 61238874 61245001 chr5:61238874-61245001:+:L1PA4:REF 12 + L1PA4 REF full-length LINC02057 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.8879 0.627426 0.892514 0.961913 0.790991 0.906667 0.00892857 0.958937 0.97377 0.896341 0.933921 0.950226 1828 1830 chr5 62798974 62804997 chr5:62798974-62804997:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.3125 0.309923 0.706406 0.713242 0.590586 0.654498 0.0168539 0.812065 0.764111 0.768156 0.696043 1829 1831 chr5 62817292 62823372 chr5:62817292-62823372:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.828319 0.845006 0.809362 0.774423 0.800153 0.783217 0.0287206 0.9 0.943132 0.829517 0.908932 0.954733 1830 1832 chr5 63090181 63094755 chr5:63090181-63094755:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919643 0.553846 0.823529 0.801527 0.627119 0.520408 0.0227273 0.941667 0.941964 0.841667 0.903465 0.97619 1831 1833 chr5 63375698 63381967 chr5:63375698-63381967:+:L1PA7:REF 11 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.818182 0.0 0.15 0.152174 0.0 0.0238095 0.0 0.9 0.1 0.0416667 0.775 1832 1834 chr5 63506972 63513441 chr5:63506972-63513441:+:L1PA7:REF 1 + L1PA7 REF full-length MRC5 0.323383 1833 1835 chr5 63581796 63587933 chr5:63581796-63587933:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.900616 0.379226 0.677596 0.687078 0.384218 0.471066 0.0409408 0.867246 0.670844 0.674293 0.548303 0.934142 1834 1836 chr5 64129091 64135124 chr5:64129091-64135124:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.152224 0.786946 0.820377 0.756182 0.584816 0.672439 0.0409463 0.930006 0.849497 0.821797 0.861063 0.926149 1835 1837 chr5 64464920 64470915 chr5:64464920-64470915:-:L1PA7:REF 10 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.731707 0.5 0.45 0.560669 0.302632 0.0 0.646154 0.270073 0.384615 0.591837 1836 1838 chr5 64473756 64477100 chr5:64473756-64477100:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.75 0.0689655 0.2 0.216783 0.166667 0.0 0.0454545 0.444444 0.0 0.184211 0.0338983 0.727273 1837 1839 chr5 64477092 64483253 chr5:64477092-64483253:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.774194 0.4875 0.558824 0.589109 0.397059 0.442623 0.658537 0.333333 0.575 0.530612 0.8 1838 1840 chr5 64709034 64715065 chr5:64709034-64715065:-:L1PA2:REF 12 - L1PA2 REF full-length SHISAL2B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0638298 0.393686 0.941447 0.963176 0.657143 0.872549 0.728929 0.96118 0.979543 0.975225 0.972284 0.847273 1839 1841 chr5 65164017 65170048 chr5:65164017-65170048:+:L1PA2:REF 12 + L1PA2 REF full-length ADAMTS6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.900771 0.972443 0.966115 0.97947 0.953576 0.835196 0.624639 0.67628 0.98318 0.963992 0.977601 0.959902 1840 1842 chr5 65370262 65376273 chr5:65370262-65376273:+:L1PA3:REF 12 + L1PA3 REF full-length ADAMTS6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.538143 0.963884 0.985463 0.979629 0.944478 0.825561 0.715356 0.948823 0.940715 0.986348 0.971094 0.977011 1841 1843 chr5 65846889 65853068 chr5:65846889-65853068:-:L1PA6:REF 1 - L1PA6 REF full-length MRC5 0.167323 1842 1844 chr5 66105953 66112079 chr5:66105953-66112079:+:L1PA6:REF 2 + L1PA6 REF full-length HepG2,MRC5 0.890909 0.309783 1843 1845 chr5 66382748 66388765 chr5:66382748-66388765:-:L1PA3:REF 5 - L1PA3 REF full-length HepG2,BJ,MRC5,HeLaS3,K562 0.497937 0.804196 0.76497 0.776173 0.0107527 1844 1846 chr5 66750283 66754219 chr5:66750283-66754219:+:L1HS:REF 12 + L1HS REF 3prime-truncated MAST4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885263 0.602245 0.789725 0.778219 0.927247 0.576471 0.00911458 0.966667 0.819704 0.780311 0.967762 0.972376 1845 1847 chr5 67598336 67604471 chr5:67598336-67604471:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.899543 0.957187 0.790476 0.593368 0.676768 0.0490798 0.00961538 0.975728 0.907407 0.521739 0.702703 0.948148 1846 1848 chr5 67703676 67708855 chr5:67703676-67708855:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910689 0.723054 0.894922 0.651637 0.814502 0.225537 0.0355769 0.980095 0.944946 0.723666 0.819048 0.939921 1847 1849 chr5 67736897 67742931 chr5:67736897-67742931:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.838109 0.905332 0.934155 0.799883 0.936585 0.555211 0.172828 0.890897 0.969884 0.775181 0.90706 0.97782 1848 1850 chr5 67757565 67763694 chr5:67757565-67763694:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.866218 0.964727 0.876664 0.686567 0.85654 0.440393 0.153635 0.971466 0.965129 0.72949 0.810152 0.914583 1849 1851 chr5 67780007 67786186 chr5:67780007-67786186:+:L1PA3:REF 12 + L1PA3 REF full-length LOC101928858 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.683047 0.8941 0.851546 0.699038 0.100189 0.471564 0.0441176 0.785489 0.923567 0.79056 0.741993 0.730216 1850 1852 chr5 67817944 67823959 chr5:67817944-67823959:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0645161 0.977528 0.947791 0.652295 0.773529 0.466667 0.0037594 0.885906 0.831858 0.814286 0.753049 0.8 1851 1853 chr5 67889604 67895628 chr5:67889604-67895628:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.121317 0.887974 0.942169 0.84761 0.458929 0.67033 0.025641 0.935976 0.954082 0.763514 0.933852 0.960265 1852 1854 chr5 68691640 68697661 chr5:68691640-68697661:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.865741 0.74256 0.927342 0.639961 0.773424 0.377119 0.569412 0.861446 0.923828 0.833977 0.828 0.929825 1853 1855 chr5 68864954 68871442 chr5:68864954-68871442:+:L1PA7:REF 2 + L1PA7 REF full-length HepG2,MRC5 0.666667 0.6875 1854 1856 chr5 71604580 71610593 chr5:71604580-71610593:-:L1PA2:REF 12 - L1PA2 REF full-length MCCC2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.924588 0.963739 0.983004 0.982123 0.977367 0.96996 0.97021 0.93617 0.981102 0.953923 0.978898 0.979192 1855 1857 chr5 72577317 72583458 chr5:72577317-72583458:+:L1PA4:REF 12 + L1PA4 REF full-length LINC02056 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919006 0.574153 0.920498 0.958252 0.947368 0.919492 0.884323 0.961326 0.971483 0.96044 0.899429 0.953596 1856 1858 chr5 73874410 73880569 chr5:73874410-73880569:-:L1PA3:REF 11 - L1PA3 REF full-length ARHGEF28 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.911582 0.982836 0.963567 0.981398 0.936733 0.850679 0.97619 0.976687 0.958814 0.971953 0.948187 1857 1859 chr5 74706305 74712443 chr5:74706305-74712443:+:L1PA3:REF 12 + L1PA3 REF full-length HEXB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.939024 0.889186 0.892857 0.942857 0.906371 0.926686 0.889049 0.884615 0.98162 0.886731 0.915028 0.895093 1858 1860 chr5 75098286 75103059 chr5:75098286-75103059:-:L1PA5:REF 1 - L1PA5 REF 3prime-truncated ANKRD31 MRC5 0.556962 1859 1861 chr5 75129665 75129959 chr5:75129665-75129959:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated ANKRD31 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91984 0.526882 0.711712 0.701215 0.728223 0.469048 0.00376648 0.930769 0.960714 0.623077 0.851429 0.932258 1860 1862 chr5 75175748 75182091 chr5:75175748-75182091:+:L1PA4:REF 12 + L1PA4 REF full-length ANKRD31 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.9125 0.832258 0.903346 0.857634 0.86359 0.919662 0.0949721 0.964912 0.944836 0.859079 0.926431 0.960961 1861 1863 chr5 75642235 75648286 chr5:75642235-75648286:+:L1PA2:REF 12 + L1PA2 REF full-length ANKDD1B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.446706 0.94744 0.972006 0.976821 0.958088 0.876562 0.862004 0.929511 0.977076 0.961791 0.962774 0.951977 1862 1864 chr5 75695698 75701728 chr5:75695698-75701728:+:L1PA3:REF 12 + L1PA3 REF full-length POC5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.683496 0.963542 0.971583 0.969963 0.315789 0.979375 0.451713 0.330056 0.974339 0.976803 0.966066 0.906919 1863 1865 chr5 75896065 75902234 chr5:75896065-75902234:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.835541 0.56461 0.564403 0.317635 0.208661 0.0159817 0.75817 0.649015 0.594937 0.635787 0.90613 1864 1866 chr5 76032249 76038204 chr5:76032249-76038204:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.174518 0.0637845 0.145129 0.496618 0.0202312 0.319846 0.0120192 0.116071 0.811417 0.267157 0.0286055 0.258856 1865 1867 chr5 77474802 77480837 chr5:77474802-77480837:+:L1PA3:REF 12 + L1PA3 REF full-length WDR41 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.626812 0.802817 0.757895 0.888368 0.711679 0.816479 0.2375 0.559783 0.893417 0.73741 0.87069 0.868778 1866 1868 chr5 77500904 77507049 chr5:77500904-77507049:+:L1PA6:REF 1 + L1PA6 REF full-length WDR41 MRC5 0.0333333 1867 1869 chr5 78118215 78124355 chr5:78118215-78124355:+:L1PA4:REF 12 + L1PA4 REF full-length AP3B1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.95467 0.986253 0.987578 0.97984 0.97748 0.980178 0.976323 0.976504 0.981672 0.988673 0.985658 0.972358 1868 1870 chr5 78452185 78458210 chr5:78452185-78458210:-:L1PA2:REF 12 - L1PA2 REF full-length SCAMP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.172261 0.982334 0.947517 0.969773 0.117389 0.917211 0.942257 0.974343 0.97681 0.906667 0.968767 0.880226 1869 1871 chr5 78681963 78688078 chr5:78681963-78688078:+:L1PA5:REF 11 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.924668 0.881283 0.913889 0.949846 0.947942 0.951673 0.841379 0.953333 0.973001 0.940701 0.921569 1870 1872 chr5 78848085 78854204 chr5:78848085-78854204:-:L1PA3:REF 11 - L1PA3 REF full-length ARSB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.931736 0.95176 0.950673 0.911681 0.941887 0.968839 0.148968 0.970691 0.954984 0.972806 0.959133 1871 1873 chr5 78866805 78872828 chr5:78866805-78872828:+:L1PA2:REF 12 + L1PA2 REF full-length ARSB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.434498 0.98409 0.960317 0.930315 0.964115 0.924743 0.559216 0.976471 0.987805 0.968912 0.982419 0.982639 1872 1874 chr5 78939282 78945425 chr5:78939282-78945425:-:L1PA4:REF 12 - L1PA4 REF full-length ARSB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918293 0.977346 0.971831 0.974704 0.930857 0.912791 0.290102 0.934046 0.973094 0.982684 0.963986 0.968379 1873 1875 chr5 79095899 79101910 chr5:79095899-79101910:-:L1PA3:REF 1 - L1PA3 REF full-length BHMT2 MRC5 0.773279 1874 1876 chr5 79778884 79784938 chr5:79778884-79784938:-:L1HS:REF 12 - L1HS REF full-length CMYA5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0570342 0.481252 0.708258 0.843706 0.6839 0.580581 0.28 0.639438 0.98495 0.651643 0.968089 0.441953 Brouha_2003:9.7 Gardner_2017:1,Rodriguez-Martin_2020:12 1875 1877 chr5 79902294 79908448 chr5:79902294-79908448:+:L1PA3:REF 10 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.777202 0.68 0.622642 0.825175 0.752941 0.436508 0.0 0.933962 0.803419 0.883598 1876 1878 chr5 79910994 79917108 chr5:79910994-79917108:+:L1PA7:REF 9 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293 0.7 0.0344828 0.15625 0.25 0.741935 0.030303 0.0357143 0.125 0.913043 1877 1879 chr5 80391144 80397265 chr5:80391144-80397265:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91498 0.878419 0.777778 0.812933 0.948718 0.937824 0.521277 0.969466 0.971429 0.911765 0.953488 0.965116 1878 1880 chr5 81028683 81034148 chr5:81028683-81034148:+:L1PA5:REF 6 + L1PA5 REF 3prime-truncated RASGRF2 BJ,MRC5,HEK293T,HeLaS3,K562,HCT116 0.615385 0.977273 0.8875 0.465278 0.0185185 0.903846 1879 1881 chr5 81373066 81379495 chr5:81373066-81379495:+:L1PA7:REF 11 + L1PA7 REF full-length ACOT12 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.896629 0.72695 0.819048 0.881163 0.924893 0.671937 0.0176471 0.967078 0.902128 0.955729 0.925234 1880 1882 chr5 81591849 81598022 chr5:81591849-81598022:+:L1PA4:REF 12 + L1PA4 REF full-length SSBP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889514 0.808537 0.97805 0.984645 0.965924 0.970287 0.968101 0.935403 0.983749 0.981588 0.965253 0.975152 1881 1883 chr5 81616090 81622140 chr5:81616090-81622140:+:L1HS:REF 12 + L1HS REF full-length SSBP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.104485 0.888051 0.845588 0.982178 0.971902 0.977287 0.981132 0.983784 0.988278 0.878625 0.980673 0.563275 Rodriguez-Martin_2020:0,Tubio_2014:1 1882 1884 chr5 82429400 82435423 chr5:82429400-82435423:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.105776 0.925873 0.89729 0.895566 0.925252 0.841998 0.3774 0.951613 0.982833 0.905632 0.942679 0.905424 1883 1885 chr5 82932443 82938460 chr5:82932443-82938460:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868351 0.840849 0.855003 0.950928 0.0493631 0.785714 0.336241 0.953394 0.983534 0.91958 0.97 0.931611 1884 1886 chr5 83457799 83463817 chr5:83457799-83463817:-:L1PA2:REF 11 - L1PA2 REF full-length VCAN 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0907452 0.788642 0.810121 0.837901 0.766667 0.180456 0.857421 0.769984 0.833987 0.807635 0.809979 1885 1887 chr5 83793611 83799642 chr5:83793611-83799642:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.124365 0.633403 0.822193 0.965286 0.823133 0.775487 0.00545171 0.900662 0.987823 0.95498 0.909742 0.903567 1886 1888 chr5 84050337 84056479 chr5:84050337-84056479:+:L1PA5:REF 12 + L1PA5 REF full-length EDIL3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.925645 0.33383 0.644089 0.973196 0.849425 0.689243 0.0075188 0.737615 0.985075 0.973568 0.945312 0.96934 1887 1889 chr5 85638451 85644538 chr5:85638451-85644538:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.127915 0.794429 0.755844 0.657194 0.00718232 0.876072 0.00433437 0.0656934 0.81466 0.528369 0.913831 0.742891 1888 1890 chr5 85657593 85663641 chr5:85657593-85663641:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0593692 0.859743 0.662684 0.702394 0.00628366 0.517014 0.00462428 0.280423 0.903689 0.759475 0.834348 0.877583 1889 1891 chr5 86265809 86271139 chr5:86265809-86271139:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.8473 0.119298 0.463878 0.593364 0.741463 0.291793 0.0157895 0.824859 0.979079 0.611374 0.655102 0.916667 1890 1892 chr5 86510690 86516743 chr5:86510690-86516743:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0582353 0.88351 0.803818 0.823948 0.894373 0.805806 0.0207291 0.908745 0.98303 0.830508 0.865598 0.940466 Gardner_2017:1 1891 1893 chr5 86772323 86778600 chr5:86772323-86778600:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.936709 0.364532 0.44186 0.491765 0.630137 0.122807 0.0 0.428571 0.967949 0.555556 0.588542 0.981481 1892 1894 chr5 87212103 87218330 chr5:87212103-87218330:-:L1PA7:REF 12 - L1PA7 REF full-length LOC101929380 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.848 0.750572 0.92446 0.849923 0.934708 0.633803 0.0816327 0.847328 0.986971 0.98 0.955224 0.953947 1893 1895 chr5 87918991 87925112 chr5:87918991-87925112:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.831395 0.370229 0.323944 0.116667 0.598131 0.349593 0.00813008 0.494737 0.788546 0.733333 0.593607 0.715909 1894 1896 chr5 88009454 88015622 chr5:88009454-88015622:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880886 0.213873 0.736544 0.715909 0.486618 0.365672 0.0262172 0.352713 0.992701 0.705202 0.941011 0.932099 1895 1897 chr5 88052330 88058345 chr5:88052330-88058345:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0980881 0.770201 0.531184 0.593715 0.813227 0.581958 0.013587 0.791498 0.842403 0.744715 0.739405 0.725253 1896 1898 chr5 88305753 88310434 chr5:88305753-88310434:+:L1P2:REF 1 + L1P2 REF 3prime-truncated TMEM161B-AS1 MRC5 0.629032 1897 1899 chr5 89219912 89224332 chr5:89219912-89224332:+:L1P2:REF 12 + L1P2 REF 3prime-truncated MEF2C-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.899696 0.116144 0.960123 0.945029 0.966049 0.688462 0.388769 0.944444 0.985075 0.952381 0.971751 0.979866 1898 1900 chr5 89621547 89627683 chr5:89621547-89627683:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.607407 0.408163 0.740385 0.472119 0.5 0.484848 0.122807 0.566667 0.976562 0.52381 0.487179 0.672 1899 1901 chr5 90031166 90037663 chr5:90031166-90037663:+:L1PA7:REF 1 + L1PA7 REF full-length MRC5 0.0136986 1900 1902 chr5 90073229 90079236 chr5:90073229-90079236:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0555867 0.694175 0.751891 0.685317 0.702934 0.645937 0.00592768 0.617875 0.968627 0.647228 0.913911 0.957159 1901 1903 chr5 90154963 90154967 chr5:90154963-90154967:+:L1HS:NONREF 11 + L1HS KNR euL1db:mrip6372,1KGP:L1_umary_LINE1_1163,Philippe:EXP_ID_1083 LINC01339 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.172784 0.802716 0.782708 0.725316 0.963284 0.573913 0.0193878 0.916404 0.975057 0.824513 0.878788 Rodriguez-Martin_2020:35,Tubio_2014:19 1902 1904 chr5 90208331 90214364 chr5:90208331-90214364:+:L1PA2:REF 12 + L1PA2 REF full-length LINC01339 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.053528 0.678845 0.737943 0.746753 0.00716226 0.544 0.00765585 0.849222 0.983072 0.728827 0.882256 0.587494 1903 1905 chr5 90662588 90668637 chr5:90662588-90668637:-:L1PA3:REF 12 - L1PA3 REF full-length ADGRV1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0863891 0.580089 0.737899 0.789632 0.40579 0.655373 0.890822 0.844916 0.92239 0.725138 0.943936 0.710267 1904 1906 chr5 90816413 90822442 chr5:90816413-90822442:-:L1PA4:REF 12 - L1PA4 REF full-length ADGRV1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.781435 0.75674 0.734168 0.776699 0.879253 0.850202 0.812853 0.890271 0.894444 0.754808 0.89043 0.874317 1905 1907 chr5 90923630 90929658 chr5:90923630-90929658:-:L1PA2:REF 12 - L1PA2 REF full-length ADGRV1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0944476 0.98256 0.94685 0.972567 0.608098 0.981224 0.945764 0.4387 0.980208 0.962081 0.976871 0.652083 1906 1908 chr5 91746646 91751658 chr5:91746646-91751658:-:L1P3:REF 1 - L1P3 REF 3prime-truncated MRC5 0.304348 1907 1909 chr5 91762133 91768161 chr5:91762133-91768161:+:L1PA3:REF 10 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.652381 0.523649 0.607143 0.802405 0.677273 0.542857 0.71831 0.897321 0.787879 0.888889 1908 1910 chr5 92193473 92199495 chr5:92193473-92199495:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.0121212 0.300395 0.655431 0.962008 0.859779 0.752941 0.674242 0.86722 0.898649 0.798077 0.804878 1909 1911 chr5 92296968 92302985 chr5:92296968-92302985:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.150519 0.899471 0.955604 0.961823 0.966102 0.947802 0.0191083 0.950635 0.983299 0.966292 0.944361 0.983135 1910 1912 chr5 93213145 93219176 chr5:93213145-93219176:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.072316 0.907991 0.953928 0.961007 0.898046 0.932825 0.0284797 0.921094 0.957134 0.934965 0.959721 0.942578 1911 1913 chr5 93261035 93267065 chr5:93261035-93267065:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0717185 0.952565 0.885862 0.889937 0.95608 0.904532 0.0316869 0.951579 0.909833 0.960976 0.969964 0.960976 1912 1914 chr5 93442075 93448205 chr5:93442075-93448205:+:L1PA6:REF 1 + L1PA6 REF full-length NR2F1-AS1 MRC5 0.824561 1913 1915 chr5 93522544 93529042 chr5:93522544-93529042:+:L1PA8:REF 12 + L1PA8 REF full-length NR2F1-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880435 0.786834 0.978304 0.97994 0.965517 0.981424 0.0196629 0.995798 0.977912 0.968858 0.979167 0.92887 1914 1916 chr5 93856115 93857936 chr5:93856115-93857936:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated FAM172A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.897837 0.968844 0.976744 0.976781 0.971429 0.989327 0.337398 0.971771 0.981 0.93758 0.946565 0.962293 1915 1917 chr5 94132827 94138583 chr5:94132827-94138583:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated MRC5 0.0 1916 1918 chr5 96103200 96109249 chr5:96103200-96109249:-:L1PA3:REF 12 - L1PA3 REF full-length LOC101929710 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.897751 0.970283 0.978247 0.966178 0.968589 0.972624 0.282843 0.774194 0.970272 0.981588 0.98006 0.96719 1917 1919 chr5 96303464 96309906 chr5:96303464-96309906:-:L1PA7:REF 12 - L1PA7 REF full-length LOC101929710 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.927326 0.990307 0.97852 0.972789 0.885135 0.958801 0.00892857 0.963351 0.974227 0.962162 0.934322 0.962264 1918 1920 chr5 96355999 96361794 chr5:96355999-96361794:-:L1PA8:REF 12 - L1PA8 REF 3prime-truncated LOC101929710 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871025 0.452465 0.812233 0.840369 0.29239 0.949597 0.002079 0.779412 0.660853 0.853814 0.784397 0.926746 1919 1921 chr5 96555240 96561368 chr5:96555240-96561368:+:L1PA4:REF 12 + L1PA4 REF full-length LOC101929710 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.852727 0.572104 0.90566 0.896989 0.399464 0.96701 0.0141844 0.801105 0.8528 0.887879 0.846032 0.939394 1920 1922 chr5 97234257 97240422 chr5:97234257-97240422:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.930095 0.60767 0.908266 0.941696 0.442235 0.342484 0.0439024 0.392505 0.986272 0.847397 0.742344 0.962963 1921 1923 chr5 97302295 97307097 chr5:97302295-97307097:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873585 0.483799 0.8 0.766077 0.145185 0.0390144 0.0147275 0.84689 0.969582 0.752542 0.378655 0.94 1922 1924 chr5 97513923 97519943 chr5:97513923-97519943:-:L1PA2:REF 12 - L1PA2 REF full-length LINC01340 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.535159 0.685731 0.757193 0.947546 0.321978 0.455882 0.0108386 0.93945 0.97541 0.785 0.620519 0.910165 1923 1925 chr5 97717792 97723895 chr5:97717792-97723895:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.88558 0.22428 0.950355 0.9516 0.291925 0.296675 0.00736377 0.806159 0.982301 0.938462 0.573374 0.966019 1924 1926 chr5 97809914 97815940 chr5:97809914-97815940:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.580723 0.311268 0.914062 0.940691 0.426277 0.697605 0.0177305 0.811801 0.979644 0.951316 0.766917 0.95675 1925 1927 chr5 98022598 98025962 chr5:98022598-98025962:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.916084 0.814984 0.962725 0.96866 0.710145 0.776119 0.025019 0.920343 0.9791 0.954766 0.886565 0.971791 1926 1928 chr5 98113450 98119596 chr5:98113450-98119596:+:L1PA5:REF 12 + L1PA5 REF full-length LINC01846 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.842105 0.0437158 0.9447 0.967105 0.211503 0.081761 0.0172414 0.842975 0.972222 0.949219 0.630631 0.960894 1927 1929 chr5 98342992 98349146 chr5:98342992-98349146:+:L1PA3:REF 3 + L1PA3 REF full-length 2102Ep,HepG2,MRC5 0.674419 0.608333 0.989399 1928 1930 chr5 98546665 98552701 chr5:98546665-98552701:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.444576 0.482881 0.794353 0.669801 0.278351 0.486602 0.0142327 0.375898 0.9767 0.963197 0.562538 0.968116 1929 1931 chr5 98737215 98739296 chr5:98737215-98739296:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878067 0.200475 0.951161 0.944745 0.314367 0.346304 0.0107411 0.936401 0.982196 0.9062 0.696735 0.944186 1930 1932 chr5 99037312 99043760 chr5:99037312-99043760:+:L1PA7:REF 7 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.875 0.592593 0.761905 0.941935 0.920635 0.74359 0.985507 1931 1933 chr5 99146176 99152358 chr5:99146176-99152358:+:L1PA5:REF 6 + L1PA5 REF full-length HepG2,MRC5,HEK293T,HeLaS3,K562,HEK293 0.236364 0.545872 0.654545 0.0190476 0.0 0.726316 1932 1934 chr5 99339615 99345764 chr5:99339615-99345764:-:L1PA3:REF 6 - L1PA3 REF full-length HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.170306 0.492308 0.516791 0.591667 0.789855 0.537815 1933 1935 chr5 99557743 99563900 chr5:99557743-99563900:-:L1PA4:REF 12 - L1PA4 REF full-length LINC02113 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.704 0.417937 0.536545 0.528446 0.676145 0.0544465 0.0030722 0.385321 0.871795 0.498413 0.748996 0.879808 1934 1936 chr5 99855982 99861944 chr5:99855982-99861944:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.406397 0.806964 0.835235 0.832165 0.923762 0.662827 0.0421569 0.970277 0.850323 0.950617 0.968254 1935 1937 chr5 100458104 100464295 chr5:100458104-100464295:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901088 0.723675 0.79542 0.884298 0.960363 0.724294 0.0504103 0.858503 0.905004 0.919725 0.902347 0.832323 1936 1938 chr5 100930088 100936228 chr5:100930088-100936228:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.8 0.0160256 0.239216 0.362445 0.400585 0.521978 0.172043 0.922619 0.940909 0.361538 0.279528 0.853846 1937 1939 chr5 101162855 101168997 chr5:101162855-101168997:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.0769231 1938 1940 chr5 101180130 101186147 chr5:101180130-101186147:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.825266 0.481915 0.708103 0.711253 0.690341 0.713831 0.0801471 0.911544 0.977501 0.77977 0.745565 0.902582 1939 1941 chr5 101528902 101530875 chr5:101528902-101530875:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883959 0.377023 0.609071 0.565083 0.724289 0.512605 0.0115942 0.907186 0.966942 0.610656 0.659674 0.934426 1940 1942 chr5 101567218 101567614 chr5:101567218-101567614:-:L1P3:REF 12 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.913165 0.0616438 0.751761 0.706422 0.895038 0.519231 0.0223214 0.966495 0.982885 0.751852 0.912409 0.972973 1941 1943 chr5 102131356 102137385 chr5:102131356-102137385:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.151656 0.883289 0.833179 0.774001 0.939424 0.675905 0.010395 0.9213 0.969104 0.777174 0.945171 0.917133 1942 1944 chr5 102177894 102179967 chr5:102177894-102179967:-:L1P3:REF 12 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.685484 0.132653 0.451613 0.44181 0.484848 0.0588235 0.0 0.952381 0.796875 0.366667 0.487179 0.921875 1943 1945 chr5 102189483 102194435 chr5:102189483-102194435:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.16859 0.9054 0.767401 0.817787 0.824524 0.609865 0.0469188 0.96124 0.973382 0.764535 0.842105 0.921895 1944 1946 chr5 102671229 102677260 chr5:102671229-102677260:+:L1PA2:REF 12 + L1PA2 REF full-length LINC00491 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.117526 0.451051 0.882155 0.96276 0.010877 0.801729 0.0975493 0.90753 0.979225 0.921589 0.898495 0.847489 1945 1947 chr5 103046752 103052769 chr5:103046752-103052769:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.364775 0.836177 0.901862 0.926291 0.952315 0.851039 0.35348 0.982226 0.969892 0.908621 0.938762 0.954306 1946 1948 chr5 104074362 104080381 chr5:104074362-104080381:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.422265 0.340426 0.782848 0.871529 0.425626 0.414005 0.00190658 0.494845 0.00599829 0.851682 0.91954 0.96223 1947 1949 chr5 104446375 104452406 chr5:104446375-104452406:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0893352 0.806054 0.803379 0.954937 0.876249 0.756514 0.0825397 0.984416 0.980737 0.860911 0.732481 0.97542 1948 1950 chr5 104518587 104524616 chr5:104518587-104524616:+:L1HS:REF 8 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HEK293,H1 0.842424 0.876712 0.848778 0.959866 0.886069 0.945055 0.791563 0.948164 1949 1951 chr5 105513236 105519274 chr5:105513236-105519274:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.166792 0.857201 0.837596 0.945489 0.927102 0.81172 0.469989 0.978276 0.981132 0.89666 0.866297 0.948498 1950 1952 chr5 106425382 106431381 chr5:106425382-106431381:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.855505 0.658307 0.860825 0.953428 0.889724 0.73 0.00684932 0.911672 0.983573 0.965066 0.848571 0.991903 1951 1953 chr5 106599671 106599673 chr5:106599671-106599673:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip6420,1KGP:L1_umary_LINE1_1189,Philippe:EXP_ID_1090 K562 0.0451197 1952 1954 chr5 106622805 106628811 chr5:106622805-106628811:-:L1PA3:REF 9 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293 0.815385 0.60274 0.77 0.939641 0.888889 0.541667 0.96875 0.882353 0.81 1953 1955 chr5 106713866 106719888 chr5:106713866-106719888:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.838006 0.816649 0.828092 0.914051 0.882835 0.672968 0.0217228 0.967919 0.985401 0.945501 0.920678 0.928987 1954 1956 chr5 106898992 106905178 chr5:106898992-106905178:-:L1PA3:REF 12 - L1PA3 REF full-length LINC01950 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.438742 0.782908 0.759831 0.908267 0.942987 0.773893 0.00383142 0.94386 0.978355 0.932551 0.936228 0.931193 1955 1957 chr5 108398474 108401117 chr5:108398474-108401117:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated MRC5 0.227823 1956 1958 chr5 109259387 109265418 chr5:109259387-109265418:+:L1HS:REF 11 + L1HS REF full-length LOC285638 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.10757 0.909868 0.954496 0.960519 0.931601 0.478992 0.969352 0.990891 0.903106 0.96925 0.969784 1957 1959 chr5 109441620 109447643 chr5:109441620-109447643:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.823504 0.821634 0.824362 0.878392 0.89963 0.96129 0.656538 0.970661 0.92851 0.848 0.909714 0.976149 1958 1960 chr5 110144555 110144557 chr5:110144555-110144557:-:L1HS:NONREF 4 - L1HS KNR euL1db:mrip6435,Philippe:EXP_ID_1092 2102Ep,HepG2,BJ,HEK293T 0.0282293 0.946752 0.862304 0.660266 Rodriguez-Martin_2020:5,Tubio_2014:3 1959 1961 chr5 110278636 110284796 chr5:110278636-110284796:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.877882 0.586207 0.771407 0.791839 0.635475 0.37037 0.00459242 0.528231 0.96325 0.774138 0.658613 0.928571 1960 1962 chr5 110933986 110940119 chr5:110933986-110940119:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.861736 0.174067 0.744186 0.953542 0.291667 0.273148 0.02589 0.302632 0.824427 0.884422 0.634146 0.901734 1961 1963 chr5 110985740 110991743 chr5:110985740-110991743:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.527809 0.478305 0.773348 0.974611 0.287807 0.672103 0.0319635 0.828241 0.937282 0.936073 0.864407 0.931655 1962 1964 chr5 111029735 111035854 chr5:111029735-111035854:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896368 0.568849 0.69795 0.951301 0.655143 0.251689 0.0125 0.371917 0.855294 0.920635 0.827586 0.933036 1963 1965 chr5 111084879 111090908 chr5:111084879-111090908:-:L1PA3:REF 10 - L1PA3 REF full-length WDR36 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293 0.841176 0.905292 0.912121 0.944381 0.910204 0.888889 0.674847 0.938095 0.871951 0.897222 1964 1966 chr5 111302238 111308262 chr5:111302238-111308262:+:L1HS:REF 12 + L1HS REF full-length CAMK4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.121076 0.64834 0.853426 0.973808 0.916719 0.573413 0.0152039 0.644909 0.920026 0.934879 0.982225 0.967049 1965 1967 chr5 111986003 111992116 chr5:111986003-111992116:-:L1PA3:REF 12 - L1PA3 REF full-length NREP-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.92233 0.888006 0.963974 0.969912 0.873857 0.727401 0.0256937 0.448598 0.942507 0.985743 0.953042 0.971014 1966 1968 chr5 112460747 112466882 chr5:112460747-112466882:-:L1PA5:REF 11 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.830409 0.175043 0.470472 0.451366 0.857732 0.047619 0.0112867 0.941634 0.561497 0.840476 0.909465 1967 1969 chr5 112538668 112545103 chr5:112538668-112545103:+:L1PA7:REF 10 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.0769231 0.0357143 0.384615 0.244604 0.521739 0.0625 0.8 0.894737 0.111111 0.684211 1968 1970 chr5 112586038 112590543 chr5:112586038-112590543:+:L1P2:REF 4 + L1P2 REF 3prime-truncated 2102Ep,MRC5,HCT116,HEK293 0.933333 0.767296 0.888889 0.98 1969 1971 chr5 112677335 112679631 chr5:112677335-112679631:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated LOC102467216 MRC5 0.9375 1970 1972 chr5 113367383 113367385 chr5:113367383-113367385:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip6452,Philippe:EXP_ID_1095 MCC HeLaS3 0.616314 Rodriguez-Martin_2020:0,Tubio_2014:6 1971 1973 chr5 113923302 113925132 chr5:113923302-113925132:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868201 0.237237 0.518717 0.539581 0.3 0.156863 0.00484262 0.91133 0.557505 0.487719 0.430108 0.944262 1972 1974 chr5 114157007 114163149 chr5:114157007-114163149:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868132 0.59588 0.936123 0.898795 0.433145 0.490909 0.00510204 0.361111 0.87242 0.929487 0.665377 0.938776 1973 1975 chr5 114295046 114295849 chr5:114295046-114295849:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923364 0.0583784 0.922297 0.975067 0.262222 0.120482 0.0149007 0.800562 0.581105 0.950658 0.601411 0.91746 1974 1976 chr5 114670871 114676900 chr5:114670871-114676900:+:L1PA3:REF 5 + L1PA3 REF full-length LOC101927078 2102Ep,HepG2,MRC5,HCT116,IMR90 0.96 0.688406 0.694624 0.873333 0.7 1975 1977 chr5 114813131 114819396 chr5:114813131-114819396:-:L1PA6:REF 10 - L1PA6 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.03125 0.378788 0.301961 0.0 0.0909091 0.0 0.282609 0.350427 0.416667 0.348485 1976 1978 chr5 115117313 115123392 chr5:115117313-115123392:+:L1PA5:REF 12 + L1PA5 REF full-length TRIM36 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.694118 0.676923 0.583333 0.710092 0.752632 0.731707 0.0222222 0.8 0.8 0.652174 0.73545 0.773333 1977 1979 chr5 115441912 115448215 chr5:115441912-115448215:+:L1PA5:REF 7 + L1PA5 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HEK293 0.0222222 0.928571 0.92623 0.533333 0.551724 0.0 0.907407 1978 1980 chr5 115674518 115680703 chr5:115674518-115680703:+:L1PA3:REF 12 + L1PA3 REF full-length LOC102467217 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.925333 0.778912 0.72103 0.83485 0.833846 0.40099 0.00740741 0.407821 0.969349 0.808696 0.881919 0.913386 1979 1981 chr5 115877197 115883667 chr5:115877197-115883667:-:L1PA7:REF 1 - L1PA7 REF full-length AP3S1 MRC5 0.282443 1980 1982 chr5 116079901 116082733 chr5:116079901-116082733:+:L1P3:REF 12 + L1P3 REF 3prime-truncated COMMD10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.881148 0.717419 0.744015 0.743003 0.91119 0.866864 0.612971 0.849785 0.787958 0.832653 0.956693 0.958716 1981 1983 chr5 116113364 116113366 chr5:116113364-116113366:-:L1HS:NONREF 7 - L1HS KNR euL1db:mrip6464 COMMD10 HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.961632 0.976562 0.895577 0.990256 0.961014 0.977697 0.648374 1982 1984 chr5 117338253 117344286 chr5:117338253-117344286:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.25 0.0295276 0.719284 0.787631 0.882948 0.416 0.0119048 0.230216 0.964667 0.678505 0.780936 0.738189 1983 1985 chr5 117527598 117533625 chr5:117527598-117533625:-:L1PA2:REF 12 - L1PA2 REF full-length LINC00992 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.281212 0.782752 0.871763 0.938721 0.947459 0.660504 0.0219629 0.941454 0.978091 0.815957 0.847476 0.935025 1984 1986 chr5 117673840 117673842 chr5:117673840-117673842:+:L1HS:NONREF 2 + L1HS KNR euL1db:mrip6467,Philippe:EXP_ID_1098 2102Ep,MRC5 0.968872 0.953028 1985 1987 chr5 118382971 118389064 chr5:118382971-118389064:+:L1PA3:REF 12 + L1PA3 REF full-length LINC02208 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.884432 0.211215 0.654924 0.735981 0.170901 0.190341 0.00769231 0.977974 0.964751 0.664038 0.547154 0.966374 1986 1988 chr5 118500000 118502912 chr5:118500000-118502912:-:L1P1:REF 12 - L1P1 REF 3prime-truncated LINC02208 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.88512 0.117289 0.774256 0.772073 0.127145 0.260432 0.00995575 0.967001 0.957011 0.763889 0.394796 0.97416 1987 1989 chr5 118651327 118651329 chr5:118651327-118651329:-:L1HS:NONREF 1 - L1HS KNR Philippe:EXP_ID_1099 MRC5 0.883025 1988 1990 chr5 119294044 119300263 chr5:119294044-119300263:-:L1PA3:REF 8 - L1PA3 REF full-length TNFAIP8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,HEK293 0.895425 0.180451 0.955556 0.976143 0.044843 0.979798 1.0 0.940171 1989 1991 chr5 119684785 119690814 chr5:119684785-119690814:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.853342 0.665559 0.77805 0.819195 0.55377 0.647362 0.0170015 0.908275 0.979592 0.719814 0.729043 0.949033 1990 1992 chr5 119776586 119780799 chr5:119776586-119780799:-:L1PA3:REF 7 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,HCT116,HEK293 0.561538 0.683333 0.888889 0.229814 0.714286 0.984536 0.842857 1991 1993 chr5 119906031 119906624 chr5:119906031-119906624:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.867257 0.214634 0.7251 0.691729 0.114846 0.0661157 0.0 0.795775 0.977358 0.712418 0.615023 0.912281 1992 1994 chr5 119987772 119992292 chr5:119987772-119992292:-:L1PA7:REF 8 - L1PA7 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293 0.0 0.454545 0.742424 0.111111 0.0833333 0.888889 0.647059 0.352941 1993 1995 chr5 120126861 120133028 chr5:120126861-120133028:-:L1PA4:REF 10 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293,H1 0.819209 0.217391 0.965909 0.966535 0.27027 0.431818 0.958678 0.771429 0.629213 0.884615 1994 1996 chr5 120176046 120182173 chr5:120176046-120182173:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.912636 0.675325 0.906096 0.920177 0.536255 0.739464 0.0767093 0.724474 0.960813 0.89821 0.775871 0.947977 1995 1997 chr5 120421208 120427233 chr5:120421208-120427233:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.255501 0.632153 0.899617 0.967997 0.525714 0.592287 0.0932005 0.878436 0.965066 0.980355 0.841841 0.960145 1996 1998 chr5 120831425 120836963 chr5:120831425-120836963:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.515246 0.458669 0.853037 0.907516 0.464042 0.526718 0.0916031 0.629006 0.978929 0.86161 0.84752 0.875174 1997 1999 chr5 121064235 121070241 chr5:121064235-121070241:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0852891 0.234927 0.824645 0.902736 0.191657 0.602679 0.0782509 0.77185 0.978664 0.88 0.746119 0.971256 1998 2000 chr5 121659901 121666048 chr5:121659901-121666048:+:L1PA6:REF 5 + L1PA6 REF full-length 2102Ep,HepG2,MRC5,HCT116,IMR90 0.767857 0.153846 0.365639 0.982143 0.846154 1999 2001 chr5 122377544 122383563 chr5:122377544-122383563:-:L1PA2:REF 12 - L1PA2 REF full-length SNCAIP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.176261 0.805702 0.935644 0.984138 0.90898 0.745577 0.138649 0.626289 0.972727 0.967862 0.965075 0.948549 2000 2002 chr5 122509616 122515639 chr5:122509616-122515639:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.626698 0.454407 0.844205 0.936648 0.93439 0.76943 0.00555556 0.801961 0.943894 0.944024 0.913172 0.925978 2001 2003 chr5 122592542 122598662 chr5:122592542-122598662:-:L1PA5:REF 12 - L1PA5 REF full-length LOC101927357 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.846723 0.312749 0.640777 0.702326 0.883469 0.57047 0.00367647 0.954724 0.952909 0.80719 0.822519 0.90991 2002 2004 chr5 122630891 122636933 chr5:122630891-122636933:-:L1PA4:REF 12 - L1PA4 REF full-length LINC02201 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906445 0.741188 0.830402 0.917882 0.933848 0.875984 0.0102215 0.972696 0.976136 0.901449 0.941469 0.973958 2003 2005 chr5 123236611 123242616 chr5:123236611-123242616:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.23369 0.893285 0.783688 0.88605 0.738926 0.253921 0.885865 0.934284 0.887608 0.942737 0.946183 2004 2006 chr5 123250932 123257062 chr5:123250932-123257062:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.857826 0.470588 0.684432 0.77529 0.82285 0.662269 0.0113422 0.967667 0.96741 0.842407 0.813644 0.901408 2005 2007 chr5 123257063 123259414 chr5:123257063-123259414:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.857923 0.178344 0.607843 0.690217 0.931373 0.170455 0.0666667 0.948718 1.0 0.833333 0.9375 0.965517 2006 2008 chr5 125359000 125365032 chr5:125359000-125365032:-:L1PA2:REF 12 - L1PA2 REF full-length LOC101927421 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.131694 0.696462 0.917654 0.854908 0.838532 0.576231 0.0126728 0.860744 0.878497 0.896867 0.853688 0.846541 2007 2009 chr5 125918412 125924564 chr5:125918412-125924564:-:L1PA3:REF 2 - L1PA3 REF full-length HepG2,MRC5 0.26 0.822785 2008 2010 chr5 126890286 126896333 chr5:126890286-126896333:-:L1PA3:REF 12 - L1PA3 REF full-length MARCH3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.293069 0.977869 0.960289 0.927711 0.94535 0.79368 0.970181 0.962751 0.973712 0.93007 0.97177 0.833333 2009 2011 chr5 126903810 126909817 chr5:126903810-126909817:-:L1PA3:REF 11 - L1PA3 REF full-length MARCH3 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.904255 0.975084 0.975022 0.950082 0.643777 0.962871 0.979243 0.983539 0.984848 0.972687 0.979245 2010 2012 chr5 127103103 127109254 chr5:127103103-127109254:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886212 0.431498 0.574013 0.636915 0.701803 0.0445682 0.0240137 0.529158 0.852201 0.662125 0.717213 0.875862 2011 2013 chr5 127197142 127203292 chr5:127197142-127203292:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.529915 0.226804 0.333333 0.303406 0.536585 0.0196078 0.0 0.0769231 0.816901 0.351852 0.757009 0.941176 2012 2014 chr5 127540900 127545031 chr5:127540900-127545031:-:L1P1:REF 12 - L1P1 REF 3prime-truncated PRRC1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923671 0.980924 0.978881 0.935025 0.931305 0.971256 0.90216 0.939227 0.927257 0.900685 0.95 0.971496 2013 2015 chr5 127733931 127739952 chr5:127733931-127739952:-:L1PA2:REF 12 - L1PA2 REF full-length CCDC192 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.263912 0.870617 0.910672 0.908683 0.75844 0.645304 0.104698 0.938462 0.927505 0.952118 0.859756 0.581673 2014 2016 chr5 127747107 127753135 chr5:127747107-127753135:-:L1PA3:REF 12 - L1PA3 REF full-length CCDC192 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.191673 0.954851 0.910042 0.978829 0.238915 0.85034 0.170326 0.0438675 0.979198 0.969697 0.972393 0.894942 2015 2017 chr5 128293846 128299849 chr5:128293846-128299849:-:L1PA3:REF 12 - L1PA3 REF full-length FBN2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919948 0.685119 0.954853 0.974317 0.974045 0.665857 0.00720906 0.840355 0.91639 0.979508 0.972613 0.962766 2016 2018 chr5 128649998 128656430 chr5:128649998-128656430:-:L1PA7:REF 7 - L1PA7 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,HCT116,HEK293 0.896552 0.0285714 0.530612 0.857143 0.346154 0.961538 0.736842 2017 2019 chr5 128937637 128943755 chr5:128937637-128943755:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908108 0.36921 0.580935 0.797575 0.592806 0.355049 0.0407674 0.870588 0.960692 0.555556 0.610635 0.917266 2018 2020 chr5 129285246 129291357 chr5:129285246-129291357:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.879154 0.432273 0.656987 0.760316 0.596639 0.366667 0.0138614 0.951271 0.97053 0.699571 0.686207 0.931559 2019 2021 chr5 129583659 129585360 chr5:129583659-129585360:-:L1P3:REF 12 - L1P3 REF 3prime-truncated ADAMTS19 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868465 0.0230179 0.661932 0.838485 0.918063 0.036 0.0 0.961538 0.97654 0.650376 0.867647 0.938525 2020 2022 chr5 129803994 129805579 chr5:129803994-129805579:-:L1P3:REF 12 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.822222 0.0410256 0.493902 0.529915 0.733668 0.0952381 0.0 0.6375 0.924242 0.486842 0.564246 0.896 2021 2023 chr5 130732094 130738109 chr5:130732094-130738109:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.1645 0.790653 0.768172 0.668406 0.613361 0.654719 0.009319 0.887097 0.976776 0.726554 0.81516 0.850459 2022 2024 chr5 130783490 130789657 chr5:130783490-130789657:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909785 0.383362 0.742747 0.635514 0.276209 0.39966 0.0108696 0.866197 0.975027 0.716475 0.678271 0.952381 2023 2025 chr5 130817737 130823763 chr5:130817737-130823763:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.188492 0.882129 0.882353 0.834171 0.273292 0.00641026 0.371212 0.978261 0.877419 0.948718 0.969697 2024 2026 chr5 130897566 130903669 chr5:130897566-130903669:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0828877 0.159605 0.731979 0.509037 0.108446 0.00755858 0.00404313 0.00923952 0.622112 0.623539 0.778603 2025 2027 chr5 131028721 131034857 chr5:131028721-131034857:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.882488 0.5 0.520833 0.491525 0.0880734 0.228571 0.027027 0.721116 0.956072 0.467593 0.439024 0.910526 2026 2028 chr5 131308075 131312967 chr5:131308075-131312967:-:L1PA3:REF 11 - L1PA3 REF 3prime-truncated CDC42SE2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.0409612 0.0489297 0.990493 0.979487 0.00630915 0.0 0.00196078 0.567335 0.9699 0.956731 0.834677 2027 2029 chr5 131331966 131338103 chr5:131331966-131338103:-:L1PA4:REF 11 - L1PA4 REF full-length CDC42SE2 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.818846 0.979211 0.99 0.982101 0.964889 0.984488 0.985677 0.985243 0.981378 0.986968 0.993506 2028 2030 chr5 131893739 131899064 chr5:131893739-131899064:-:L1P2:REF 12 - L1P2 REF 3prime-truncated MEIKIN 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873362 0.0949153 0.619734 0.556512 0.297812 0.165498 0.0159314 0.373057 0.831472 0.629067 0.665581 0.890215 2029 2031 chr5 132116469 132122838 chr5:132116469-132122838:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906996 0.705682 0.667107 0.947109 0.883829 0.802444 0.963483 0.978587 0.966418 0.922886 0.95203 0.94697 2030 2032 chr5 132513964 132519996 chr5:132513964-132519996:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.162228 0.825243 0.854369 0.948225 0.851852 0.157447 0.615385 0.929047 0.915584 0.871875 0.866337 2031 2033 chr5 133583288 133589299 chr5:133583288-133589299:+:L1HS:REF 11 + L1HS REF full-length FSTL4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.317629 0.844237 0.341435 0.797759 0.931655 0.710448 0.0297143 0.923892 0.817708 0.87451 0.244019 2032 2034 chr5 134331307 134337485 chr5:134331307-134337485:-:L1PA6:REF 12 - L1PA6 REF full-length CDKL3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883065 0.960729 0.93858 0.95429 0.948276 0.95614 0.544061 0.935673 0.953061 0.942857 0.980036 0.956989 2033 2035 chr5 136782799 136788829 chr5:136782799-136788829:-:L1PA2:REF 9 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,HEK293,H1 0.879518 0.144847 0.957447 0.802251 0.827027 0.63587 0.601173 0.973684 0.969697 2034 2036 chr5 137044642 137050656 chr5:137044642-137050656:-:L1PA2:REF 4 - L1PA2 REF full-length SPOCK1 2102Ep,HepG2,MRC5,HCT116 0.695876 0.861244 0.796247 0.891753 2035 2037 chr5 137679083 137679086 chr5:137679083-137679086:-:L1HS:NONREF 4 - L1HS KNR euL1db:mrip6525,Philippe:EXP_ID_1106 KLHL3 HepG2,K562,HCT116,HEK293 0.924598 0.0504587 0.948229 0.968699 Rodriguez-Martin_2020:8 2036 2038 chr5 137968595 137974622 chr5:137968595-137974622:+:L1PA3:REF 12 + L1PA3 REF full-length FAM13B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929846 0.985163 0.980572 0.986471 0.974645 0.960674 0.963028 0.409195 0.980974 0.985632 0.974883 0.972421 2037 2039 chr5 139005423 139011486 chr5:139005423-139011486:-:L1PA2:REF 12 - L1PA2 REF full-length SIL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.105069 0.979534 0.787529 0.827265 0.224699 0.968712 0.916367 0.0172043 0.970629 0.615942 0.968278 0.40407 2038 2040 chr5 140593229 140593744 chr5:140593229-140593744:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.153561 0.817422 0.727811 0.836797 0.94403 0.961003 0.846389 0.901639 0.981132 0.622276 0.972923 0.946785 2039 2041 chr5 142985516 142991590 chr5:142985516-142991590:-:L1PA5:REF 2 - L1PA5 REF full-length ARHGAP26 2102Ep,MRC5 0.4 0.0888889 2040 2042 chr5 143852080 143858214 chr5:143852080-143858214:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908808 0.694972 0.950066 0.83602 0.795531 0.934513 0.0121029 0.94898 0.965567 0.865633 0.838788 0.97319 2041 2043 chr5 144049945 144056062 chr5:144049945-144056062:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885093 0.184 0.820728 0.792846 0.516279 0.637736 0.0 0.702857 0.670918 0.862745 0.711806 0.851282 2042 2044 chr5 144596209 144596422 chr5:144596209-144596422:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.843243 0.0701754 0.304878 0.317757 0.0248756 0.0769231 0.0 0.884211 0.0769231 0.5 0.480263 0.927083 2043 2045 chr5 145418732 145424748 chr5:145418732-145424748:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.782746 0.872098 0.836508 0.979951 0.807284 0.885688 0.376086 0.934726 0.898333 0.920049 0.896914 0.92865 2044 2046 chr5 145455778 145456002 chr5:145455778-145456002:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.881057 0.265643 0.572474 0.882638 0.140351 0.198391 0.00938086 0.891353 0.935264 0.873016 0.550676 0.897222 2045 2047 chr5 145512151 145512344 chr5:145512151-145512344:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated MRC5 0.503106 2046 2048 chr5 146609485 146615534 chr5:146609485-146615534:+:L1HS:REF 12 + L1HS REF full-length PPP2R2B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.134839 0.824154 0.794577 0.813782 0.661056 0.847682 0.0788576 0.921483 0.926829 0.810749 0.93547 0.862566 2047 2049 chr5 147605506 147611640 chr5:147605506-147611640:-:L1PA7:REF 2 - L1PA7 REF full-length JAKMIP2-AS1 HepG2,MRC5 0.0 0.951923 2048 2050 chr5 147715845 147721872 chr5:147715845-147721872:-:L1PA2:REF 12 - L1PA2 REF full-length JAKMIP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0730864 0.78068 0.803922 0.90652 0.601928 0.716734 0.0235378 0.232246 0.777966 0.809524 0.927114 0.679502 2049 2051 chr5 147941118 147947133 chr5:147941118-147947133:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0346359 0.825025 0.758789 0.820152 0.0644436 0.927734 0.0146266 0.857668 0.841098 0.792804 0.926884 0.450273 2050 2052 chr5 148230602 148236590 chr5:148230602-148236590:+:L1PA3:REF 10 + L1PA3 REF full-length MARCOL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.0210843 0.604878 0.666667 0.707152 0.582456 0.895522 0.751678 0.859649 0.869565 0.813953 2051 2053 chr5 148279116 148281744 chr5:148279116-148281744:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated LOC102546294 MRC5 0.0 2052 2054 chr5 148319975 148321427 chr5:148319975-148321427:+:L1P1:REF 12 + L1P1 REF 3prime-truncated LOC102546294 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.113244 0.0298265 0.295127 0.43225 0.0303797 0.907059 0.0590191 0.334545 0.962733 0.684654 0.0962343 0.342857 2053 2055 chr5 148330860 148331235 chr5:148330860-148331235:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated LOC102546294 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.821755 0.303832 0.591618 0.697509 0.292063 0.852895 0.0416107 0.298485 0.906509 0.692464 0.64751 0.924242 2054 2056 chr5 148668218 148674344 chr5:148668218-148674344:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.813223 0.480432 0.527473 0.556997 0.136439 0.305085 0.488281 0.259398 0.54927 0.541284 0.534447 0.8 2055 2057 chr5 148942273 148948290 chr5:148942273-148948290:+:L1PA2:REF 10 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293 0.926282 0.87963 0.965686 0.979502 0.925743 0.96124 0.131944 0.984848 0.94697 0.956349 2056 2058 chr5 149122959 149124413 chr5:149122959-149124413:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.912459 0.586257 0.919868 0.936121 0.801348 0.878963 0.016436 0.266609 0.936717 0.951098 0.931157 0.955574 2057 2059 chr5 150742837 150748950 chr5:150742837-150748950:+:L1PA3:REF 12 + L1PA3 REF full-length DCTN4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.93308 0.977654 0.955654 0.984807 0.975164 0.98 0.979516 0.965827 0.978443 0.976905 0.979469 0.980344 2058 2060 chr5 150964139 150970275 chr5:150964139-150970275:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.727787 0.429787 0.655622 0.679525 0.348346 0.383817 0.0259009 0.266544 0.82545 0.735568 0.590455 0.805274 2059 2061 chr5 151389412 151395556 chr5:151389412-151395556:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909524 0.205479 0.633803 0.746702 0.556098 0.277228 0.00657895 0.794393 0.976636 0.666667 0.936047 0.921875 2060 2062 chr5 151830848 151833467 chr5:151830848-151833467:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated GLRA1 MRC5 0.464286 2061 2063 chr5 152025898 152027470 chr5:152025898-152027470:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated LINC01933 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.809375 0.007109 0.234114 0.20216 0.0362538 0.0108696 0.00425532 0.893805 0.025641 0.27381 0.653571 0.87 2062 2064 chr5 152076868 152082891 chr5:152076868-152082891:+:L1HS:REF 2 + L1HS REF full-length LINC01933 HepG2,MRC5 0.0464334 0.348563 2063 2065 chr5 152154288 152160759 chr5:152154288-152160759:-:L1PA8:REF 8 - L1PA8 REF full-length LINC01933 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,IMR90,H1 0.428571 0.0 0.258333 0.3258 0.0212766 0.0178571 0.351351 0.911111 2064 2066 chr5 152207300 152213333 chr5:152207300-152213333:+:L1PA2:REF 12 + L1PA2 REF full-length LINC01933 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.112186 0.771883 0.65085 0.626676 0.504837 0.680191 0.00676819 0.797886 0.740097 0.664207 0.869739 0.830258 2065 2067 chr5 152340020 152346052 chr5:152340020-152346052:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.126054 0.858392 0.805707 0.834497 0.689286 0.739028 0.0265687 0.969595 0.839157 0.869476 0.956379 0.885141 2066 2068 chr5 152653965 152659898 chr5:152653965-152659898:-:L1PA2:REF 12 - L1PA2 REF full-length LINC01470 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.161749 0.633517 0.782422 0.715593 0.316181 0.516209 0.0169492 0.204886 0.760605 0.734842 0.878497 0.931125 2067 2069 chr5 152740936 152746968 chr5:152740936-152746968:+:L1PA2:REF 12 + L1PA2 REF full-length LINC01470 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.688941 0.360887 0.654328 0.6673 0.201475 0.434517 0.0112967 0.217303 0.676422 0.655708 0.606651 0.837245 2068 2070 chr5 152762660 152768698 chr5:152762660-152768698:-:L1PA3:REF 10 - L1PA3 REF full-length LINC01470 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.488636 0.486111 0.673866 0.247387 0.319728 0.0186916 0.354167 0.72 0.775701 0.608 2069 2071 chr5 152787609 152793677 chr5:152787609-152793677:+:L1PA6:REF 1 + L1PA6 REF full-length LINC01470 MRC5 0.433962 2070 2072 chr5 152886441 152892473 chr5:152886441-152892473:-:L1HS:REF 12 - L1HS REF full-length LINC01470 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.339649 0.710255 0.788088 0.803905 0.580407 0.634304 0.0349716 0.66056 0.85434 0.802612 0.782345 0.94958 2071 2073 chr5 152913678 152919818 chr5:152913678-152919818:-:L1PA4:REF 12 - L1PA4 REF full-length LINC01470 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.766 0.0304114 0.231198 0.212081 0.026 0.0329218 0.0 0.0207469 0.208075 0.21 0.0460705 0.842342 2072 2074 chr5 153070982 153077008 chr5:153070982-153077008:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.398844 0.802071 0.82344 0.724851 0.456709 0.72282 0.0119376 0.778533 0.804791 0.795956 0.861888 0.949695 2073 2075 chr5 153300443 153306573 chr5:153300443-153306573:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873541 0.236014 0.434679 0.325606 0.0729537 0.302491 0.0364964 0.147147 0.365055 0.348018 0.493182 0.666667 2074 2076 chr5 153325326 153331330 chr5:153325326-153331330:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.634058 0.387597 0.733728 0.654832 0.277056 0.548387 0.00934579 0.440252 0.59375 0.842697 0.780303 0.953488 2075 2077 chr5 153381391 153387536 chr5:153381391-153387536:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.926944 0.571429 0.772318 0.679894 0.274027 0.236686 0.00965018 0.12188 0.624103 0.689349 0.746124 0.967557 2076 2078 chr5 153723252 153729397 chr5:153723252-153729397:+:L1PA3:REF 12 + L1PA3 REF full-length GRIA1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.860256 0.590717 0.815789 0.750645 0.190773 0.210692 0.0146628 0.521875 0.505477 0.771845 0.736086 0.833819 2077 2079 chr5 153947742 153948166 chr5:153947742-153948166:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887259 0.655035 0.938889 0.827834 0.532125 0.578662 0.0362954 0.872458 0.930207 0.87399 0.902696 0.965665 2078 2080 chr5 155168337 155174487 chr5:155168337-155174487:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.917935 0.804307 0.783691 0.766396 0.495815 0.504961 0.0235586 0.95873 0.848824 0.82 0.808763 0.912871 2079 2081 chr5 155713949 155720091 chr5:155713949-155720091:-:L1PA4:REF 8 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,K562,MCF7,HCT116,IMR90 0.612245 0.417722 0.382979 0.443182 0.177778 0.347826 0.396552 0.375 2080 2082 chr5 156061919 156067966 chr5:156061919-156067966:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.152787 0.707257 0.905586 0.924108 0.508914 0.861878 0.301424 0.902179 0.897716 0.938068 0.885406 0.956151 2081 2083 chr5 156605055 156611189 chr5:156605055-156611189:-:L1PA4:REF 12 - L1PA4 REF full-length SGCD 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918545 0.595922 0.959809 0.916282 0.373089 0.405117 0.0078329 0.362319 0.846879 0.956522 0.752531 0.945652 2082 2084 chr5 156984145 156988875 chr5:156984145-156988875:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.881503 0.697479 0.678261 0.697161 0.267516 0.366013 0.0168067 0.662338 0.770335 0.707792 0.830904 0.938776 2083 2085 chr5 158438806 158444948 chr5:158438806-158444948:-:L1PA6:REF 3 - L1PA6 REF full-length 2102Ep,MRC5,HEK293T 0.876543 0.91954 0.88764 2084 2086 chr5 158444944 158447343 chr5:158444944-158447343:-:L1P2:REF 1 - L1P2 REF 3prime-truncated MRC5 0.031746 2085 2087 chr5 160592426 160598550 chr5:160592426-160598550:+:L1PA3:REF 7 + L1PA3 REF full-length ATP10B 2102Ep,HepG2,MRC5,HEK293T,K562,HCT116,HEK293 0.888 0.462963 0.329787 0.0882353 0.0 0.0333333 0.583333 2086 2088 chr5 160709608 160715639 chr5:160709608-160715639:-:L1HS:REF 12 - L1HS REF full-length ATP10B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.824768 0.838392 0.820359 0.842235 0.775625 0.655771 0.0265537 0.880979 0.859035 0.821128 0.904364 0.954144 2087 2089 chr5 160873524 160879549 chr5:160873524-160879549:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.188525 0.788642 0.474195 0.500323 0.134137 0.414406 0.00967118 0.780347 0.743882 0.432432 0.788462 0.483645 2088 2090 chr5 161606050 161612084 chr5:161606050-161612084:-:L1PA2:REF 10 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.681333 0.475067 0.653924 0.513074 0.498783 0.0165848 0.590318 0.521228 0.662226 0.932735 2089 2091 chr5 162030925 162036952 chr5:162030925-162036952:-:L1PA2:REF 8 - L1PA2 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293 0.057377 0.815574 0.768377 0.535826 0.796053 0.768254 0.783505 0.821429 2090 2092 chr5 162530742 162531677 chr5:162530742-162531677:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.595459 0.391001 0.473684 0.472038 0.206897 0.841463 0.0167742 0.414307 0.517058 0.52648 0.41225 0.78 2091 2093 chr5 162578034 162584195 chr5:162578034-162584195:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908696 0.662424 0.701832 0.750739 0.482031 0.969362 0.0194018 0.717979 0.830684 0.736695 0.65202 0.963303 2092 2094 chr5 162690774 162696913 chr5:162690774-162696913:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.818383 0.0498615 0.481663 0.466667 0.0164779 0.941284 0.00289017 0.317337 0.144397 0.432292 0.0925 0.884422 2093 2095 chr5 163165056 163171200 chr5:163165056-163171200:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.12963 2094 2096 chr5 165041696 165046553 chr5:165041696-165046553:-:L1PA5:REF 1 - L1PA5 REF 3prime-truncated MRC5 0.243976 2095 2097 chr5 165068136 165068138 chr5:165068136-165068138:-:L1HS:NONREF 4 - L1HS KNR euL1db:mrip6619,1KGP:L1_umary_LINE1_1248,Philippe:EXP_ID_1129 2102Ep,BJ,MRC5,H1 0.821839 0.746606 0.830458 0.889246 2096 2098 chr5 166141191 166145692 chr5:166141191-166145692:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.42022 0.495893 0.721859 0.714696 0.322148 0.414806 0.00869565 0.748521 0.759065 0.717557 0.697318 0.923894 2097 2099 chr5 166444535 166450988 chr5:166444535-166450988:-:L1PA7:REF 1 - L1PA7 REF full-length MRC5 0.0238095 2098 2100 chr5 166966760 166972815 chr5:166966760-166972815:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.194824 0.825904 0.802926 0.817496 0.670929 0.784773 0.0309007 0.893919 0.835929 0.835203 0.923324 0.926684 2099 2101 chr5 168077428 168083578 chr5:168077428-168083578:-:L1PA6:REF 12 - L1PA6 REF full-length TENM2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.920746 0.49896 0.910714 0.537425 0.252822 0.929293 0.00384615 0.893773 0.543307 0.74 0.930435 0.938889 2100 2102 chr5 168630703 168637033 chr5:168630703-168637033:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.876596 0.766497 0.538043 0.596774 0.718147 0.265957 0.00757576 0.648649 0.732919 0.49 0.852564 0.909091 2101 2103 chr5 169819644 169825775 chr5:169819644-169825775:+:L1PA5:REF 12 + L1PA5 REF full-length DOCK2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919399 0.526656 0.886497 0.898776 0.776536 0.62201 0.480447 0.694864 0.632114 0.898678 0.834123 0.921212 2102 2104 chr5 170239776 170245795 chr5:170239776-170245795:-:L1PA2:REF 12 - L1PA2 REF full-length C5orf58 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.366253 0.808521 0.824189 0.814932 0.880971 0.702834 0.680456 0.894737 0.793996 0.821984 0.962576 0.930636 2103 2105 chr5 170921729 170922953 chr5:170921729-170922953:-:L1P2:REF 12 - L1P2 REF 3prime-truncated RANBP17 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.743642 0.0298103 0.863899 0.828146 0.697761 0.321429 0.0 0.749596 0.698034 0.751366 0.664642 0.600655 2104 2106 chr5 171083963 171089973 chr5:171083963-171089973:-:L1PA2:REF 11 - L1PA2 REF full-length RANBP17 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.447773 0.653578 0.977349 0.981718 0.952124 0.010682 0.98801 0.934179 0.978417 0.959786 0.844498 2105 2107 chr5 171097654 171104023 chr5:171097654-171104023:-:L1PA7:REF 2 - L1PA7 REF full-length RANBP17 MRC5,K562 1.0 0.0 2106 2108 chr5 173402796 173408828 chr5:173402796-173408828:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.110939 0.904824 0.924313 0.938821 0.875682 0.850709 0.0174726 0.899436 0.980652 0.876122 0.923311 0.906752 2107 2109 chr5 174017934 174020411 chr5:174017934-174020411:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.074834 0.217105 0.771776 0.873894 0.0682853 0.641096 0.24269 0.00473293 0.567901 0.809249 0.878003 0.603648 2108 2110 chr5 175397769 175403801 chr5:175397769-175403801:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.263618 0.729137 0.787557 0.67218 0.121622 0.748271 0.228669 0.640472 0.939236 0.881579 0.830553 0.811404 2109 2111 chr5 176276446 176282584 chr5:176276446-176282584:-:L1PA2:REF 12 - L1PA2 REF full-length SIMC1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878788 0.968025 0.945878 0.936719 0.893971 0.791165 0.904485 0.892724 0.910415 0.979296 0.900155 0.931777 2110 2112 chr5 177772245 177778274 chr5:177772245-177778274:+:L1HS:REF 8 + L1HS REF full-length FAM153A 2102Ep,BJ,MRC5,K562,MCF7,HCT116,IMR90,H1 0.0654578 0.813534 0.892027 0.15475 0.950893 0.952381 0.883417 0.899606 2111 2113 chr5 179101069 179107079 chr5:179101069-179107079:+:L1PA3:REF 12 + L1PA3 REF full-length ADAMTS2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.77799 0.656353 0.977605 0.961932 0.653368 0.621212 0.041898 0.942739 0.889714 0.966839 0.719774 0.907853 2112 2114 chr5 180902521 180908537 chr5:180902521-180908537:-:L1PA2:REF 12 - L1PA2 REF full-length BTNL8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.547282 0.831836 0.788804 0.86963 0.915414 0.604291 0.693498 0.921406 0.959965 0.688156 0.941063 0.905812 2113 2115 chr5 180926023 180932355 chr5:180926023-180932355:+:L1PA7:REF 11 + L1PA7 REF full-length BTNL8 HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0 0.330097 0.315985 0.0861244 0.0263158 0.254545 0.910256 0.855769 0.314607 0.431507 0.727273 2114 2116 chr6 1428614 1434750 chr6:1428614-1434750:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868198 0.760245 0.918919 0.967742 0.927616 0.923453 0.0123457 0.745192 0.928404 0.893246 0.949139 0.952586 2115 2117 chr6 1750291 1751485 chr6:1750291-1751485:+:L1P3:REF 10 + L1P3 REF 3prime-truncated GMDS 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.83871 0.787234 0.7 0.887179 0.945946 0.977273 0.0 0.326087 0.880952 0.548077 2116 2118 chr6 2286244 2292695 chr6:2286244-2292695:+:L1PA7:REF 1 + L1PA7 REF full-length GMDS-DT MRC5 0.911765 2117 2119 chr6 2417774 2423803 chr6:2417774-2423803:-:L1HS:REF 12 - L1HS REF full-length GMDS-DT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0845542 0.922085 0.965428 0.945243 0.949956 0.961121 0.0585191 0.940905 0.911255 0.957093 0.889969 0.957728 Brouha_2003:1.0 2118 2120 chr6 3672187 3678310 chr6:3672187-3678310:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.857616 0.151134 0.789333 0.732057 0.616183 0.0611621 0.00966184 0.704698 0.846501 0.765714 0.857685 0.918367 2119 2121 chr6 4328754 4334759 chr6:4328754-4334759:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.45614 0.689099 0.887455 0.970885 0.109596 0.955701 0.126877 0.210616 0.926718 0.896515 0.932657 0.811436 2120 2122 chr6 4831172 4836230 chr6:4831172-4836230:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated CDYL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.945638 0.976943 0.973897 0.98708 0.966031 0.01359 0.9553 0.0159521 0.983734 0.984334 0.967649 0.969072 2121 2123 chr6 5892091 5892413 chr6:5892091-5892413:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0636723 0.275691 0.644378 0.520022 0.025725 0.844138 0.00949628 0.953695 0.00874056 0.557328 0.7712 0.210784 2122 2124 chr6 6069786 6072877 chr6:6069786-6072877:-:L1P2:REF 9 - L1P2 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.162304 0.5 0.492837 0.163265 0.266667 0.010989 0.67 0.416667 0.690647 2123 2125 chr6 6185423 6191251 chr6:6185423-6191251:-:L1PA3:REF 10 - L1PA3 REF 3prime-truncated F13A1 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.613636 0.948052 0.87013 0.844237 0.642857 0.017094 0.464286 0.818681 0.771429 0.888889 2124 2126 chr6 6211664 6217690 chr6:6211664-6217690:+:L1PA3:REF 12 + L1PA3 REF full-length F13A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.907747 0.681296 0.792123 0.769493 0.574436 0.637975 0.246545 0.630516 0.864417 0.795829 0.819458 0.933411 2125 2127 chr6 6294743 6300768 chr6:6294743-6300768:-:L1PA3:REF 12 - L1PA3 REF full-length F13A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.78995 0.537287 0.766591 0.692625 0.582178 0.622673 0.0126437 0.708099 0.593949 0.694274 0.775954 0.88115 2126 2128 chr6 7925704 7931830 chr6:7925704-7931830:+:L1PA6:REF 12 + L1PA6 REF full-length BLOC1S5-TXNDC5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.903323 0.636364 0.750693 0.750831 0.776087 0.774566 0.030303 0.96 0.894428 0.767347 0.923077 1.0 2127 2129 chr6 7943195 7949299 chr6:7943195-7949299:-:L1PA4:REF 12 - L1PA4 REF full-length BLOC1S5-TXNDC5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.876993 0.58061 0.737615 0.777966 0.857562 0.788571 0.00865052 0.963554 0.974551 0.83121 0.958146 0.909091 2128 2130 chr6 8770471 8776512 chr6:8770471-8776512:-:L1PA2:REF 12 - L1PA2 REF full-length LOC100506207 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.12609 0.892033 0.911555 0.849176 0.583369 0.794899 0.0142211 0.882435 0.484045 0.903614 0.963682 0.894089 2129 2131 chr6 9443747 9449876 chr6:9443747-9449876:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.884718 0.205101 0.911084 0.879406 0.78232 0.768908 0.00539568 0.968944 0.955182 0.840909 0.937939 0.937743 2130 2132 chr6 9810750 9816777 chr6:9810750-9816777:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.123188 0.690238 0.854839 0.766703 0.861878 0.838509 0.0223176 0.911494 0.97719 0.809524 0.949153 0.884228 2131 2133 chr6 9882323 9888448 chr6:9882323-9888448:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.683948 0.535406 0.441794 0.769814 0.803831 0.889467 0.0176322 0.955207 0.956466 0.688057 0.91715 0.943914 2132 2134 chr6 9966044 9972049 chr6:9966044-9972049:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.378806 0.698988 0.860636 0.76431 0.881066 0.90429 0.0117832 0.928427 0.96567 0.851658 0.924494 0.923345 2133 2135 chr6 10133964 10134589 chr6:10133964-10134589:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.920427 0.599695 0.93046 0.696035 0.919054 0.869855 0.185864 0.527621 0.914209 0.694754 0.954604 0.926316 2134 2136 chr6 11298870 11304963 chr6:11298870-11304963:+:L1PA6:REF 7 + L1PA6 REF full-length NEDD9 HepG2,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293 0.04 0.819048 0.583333 0.181818 0.545455 0.571429 0.791667 2135 2137 chr6 12549192 12555347 chr6:12549192-12555347:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.897623 0.875734 0.965143 0.909991 0.943594 0.865258 0.00972447 0.949223 0.964753 0.934944 0.953005 0.963731 2136 2138 chr6 13190800 13190802 chr6:13190800-13190802:+:L1HS:NONREF 2 + L1HS KNR euL1db:mrip6701,1KGP:L1_umary_LINE1_1261,Philippe:EXP_ID_1140 PHACTR1 2102Ep,H1 0.410584 0.980226 Beck_2010:141.0 Gardner_2017:14,Rodriguez-Martin_2020:195,Tubio_2014:98 2137 2139 chr6 13502816 13502818 chr6:13502816-13502818:+:L1HS:NONREF 3 + L1HS KNR euL1db:mrip6703,1KGP:L1_umary_LINE1_1263,Philippe:EXP_ID_1141 HepG2,BJ,H1 0.955488 0.920703 0.956159 Beck_2010:0.0 2138 2140 chr6 14479992 14486139 chr6:14479992-14486139:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.934426 0.639828 0.964404 0.95795 0.864316 0.531034 0.940202 0.97431 0.979876 0.964992 0.952146 0.956028 2139 2141 chr6 16010534 16016561 chr6:16010534-16016561:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923711 0.632972 0.830835 0.857945 0.874172 0.710227 0.838407 0.913828 0.860636 0.81893 0.852941 0.875 2140 2142 chr6 18228389 18234361 chr6:18228389-18234361:+:L1PA5:REF 12 + L1PA5 REF full-length DEK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.934827 0.981516 0.985332 0.981363 0.968944 0.985401 0.975741 0.986431 0.983498 0.966841 0.982696 0.974026 2141 2143 chr6 19220828 19226980 chr6:19220828-19226980:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.843329 0.402322 0.698725 0.655134 0.821616 0.448743 0.00992063 0.955516 0.912605 0.75705 0.857332 0.940898 2142 2144 chr6 19246948 19253092 chr6:19246948-19253092:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.939954 0.430079 0.824356 0.714432 0.425139 0.365741 0.0135922 0.545455 0.936306 0.754098 0.818681 0.826087 2143 2145 chr6 19481741 19487890 chr6:19481741-19487890:+:L1PA5:REF 1 + L1PA5 REF full-length MRC5 0.59375 2144 2146 chr6 19495142 19500000 chr6:19495142-19500000:+:L1P1:REF 7 + L1P1 REF 3prime-truncated HepG2,MRC5,HEK293T,HeLaS3,K562,HCT116,HEK293 0.384615 0.637066 0.736842 0.532468 0.0857143 0.935065 0.897959 2145 2147 chr6 19764892 19770918 chr6:19764892-19770918:+:L1HS:REF 8 + L1HS REF full-length LOC100506885 2102Ep,HepG2,BJ,MRC5,K562,HCT116,IMR90,HEK293 0.326861 0.900123 0.954641 0.928854 0.014433 0.968344 0.898172 0.968509 Rodriguez-Martin_2020:10,Tubio_2014:17 2146 2148 chr6 22166353 22172500 chr6:22166353-22172500:-:L1PA4:REF 11 - L1PA4 REF full-length CASC15 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.920319 0.555556 0.860125 0.964725 0.737185 0.0144014 0.969565 0.972707 0.936869 0.964 0.986072 2147 2149 chr6 22174840 22180874 chr6:22174840-22180874:-:L1PA2:REF 12 - L1PA2 REF full-length CASC15 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.579386 0.606907 0.945652 0.831128 0.785276 0.693205 0.0193115 0.915487 0.828832 0.903282 0.928994 0.83114 2148 2150 chr6 23058378 23060207 chr6:23058378-23060207:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902397 0.186752 0.854191 0.922058 0.60306 0.155989 0.00158479 0.880295 0.97416 0.955381 0.632035 0.977556 2149 2151 chr6 23358988 23365117 chr6:23358988-23365117:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.83584 0.474471 0.718487 0.737416 0.437198 0.112045 0.00752688 0.884009 0.813478 0.76908 0.477143 0.883929 2150 2152 chr6 23804047 23810075 chr6:23804047-23810075:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886167 0.644034 0.777966 0.769149 0.650424 0.502451 0.0103093 0.119845 0.940503 0.729858 0.820746 0.860927 2151 2153 chr6 24082846 24089001 chr6:24082846-24089001:+:L1PA3:REF 6 + L1PA3 REF full-length HepG2,MRC5,HEK293T,HeLaS3,K562,IMR90 0.910345 0.748619 0.609272 0.623188 0.00235294 0.7 2152 2154 chr6 24811657 24817706 chr6:24811657-24817706:-:L1HS:REF 4 - L1HS REF full-length RIPOR2 2102Ep,HepG2,MRC5,HeLaS3 0.354839 0.810526 0.968127 0.96996 Brouha_2003:112.7 Gardner_2017:2,Rodriguez-Martin_2020:25,Tubio_2014:2 2153 2155 chr6 28020757 28026912 chr6:28020757-28026912:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.927626 0.89659 0.837011 0.859354 0.922466 0.848306 0.720676 0.287741 0.979682 0.889076 0.887664 0.960055 2154 2156 chr6 28621243 28627390 chr6:28621243-28627390:+:L1PA3:REF 12 + L1PA3 REF full-length ZBED9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.333775 0.0488555 0.411839 0.314506 0.0691949 0.890655 0.977401 0.0956652 0.979027 0.322016 0.22767 0.138522 2155 2157 chr6 29779787 29785823 chr6:29779787-29785823:+:L1PA6:REF 12 + L1PA6 REF full-length HCG4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.722222 0.432258 0.57839 0.361333 0.755365 0.714715 0.0534521 0.890244 0.923729 0.559091 0.775641 0.830846 2156 2158 chr6 30080599 30086625 chr6:30080599-30086625:-:L1PA3:REF 9 - L1PA3 REF full-length RNF39 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,HEK293,H1 0.955556 0.858974 0.793651 0.823129 0.863248 0.00740741 0.961111 0.939394 0.929293 2157 2159 chr6 30520820 30524408 chr6:30520820-30524408:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated LINC02569 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.914414 0.969512 0.845494 0.94709 0.923913 0.797619 0.646048 0.945355 0.967836 0.93617 0.953947 0.920792 2158 2160 chr6 32262048 32263749 chr6:32262048-32263749:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated TSBP1-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.628319 0.0292208 0.626794 0.777302 0.726166 0.911868 0.0185676 0.984615 0.75 0.781609 0.853659 0.855422 2159 2161 chr6 32489511 32489513 chr6:32489511-32489513:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip6757 MRC5 0.296464 2160 2162 chr6 32621789 32621791 chr6:32621789-32621791:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip6759,Philippe:EXP_ID_1153 BJ 0.795645 2161 2163 chr6 39454557 39460534 chr6:39454557-39460534:+:L1PA2:REF 12 + L1PA2 REF full-length KIF6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.14029 0.817106 0.948974 0.891473 0.947223 0.74674 0.138169 0.980403 0.893777 0.911925 0.969866 0.850071 2162 2164 chr6 39508241 39510081 chr6:39508241-39510081:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated KIF6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.840125 0.61829 0.782609 0.455418 0.807487 0.00847458 0.00301205 0.825175 0.318182 0.502024 0.930958 0.947368 2163 2165 chr6 39533018 39539230 chr6:39533018-39539230:+:L1PA3:REF 12 + L1PA3 REF full-length KIF6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898967 0.744749 0.94514 0.866114 0.746187 0.360691 0.0139442 0.834146 0.83353 0.891089 0.953039 0.962963 2164 2166 chr6 39736405 39742567 chr6:39736405-39742567:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.874251 0.360691 0.762846 0.604124 0.833726 0.117878 0.00519481 0.757469 0.336111 0.604905 0.805405 0.90429 2165 2167 chr6 44754479 44760501 chr6:44754479-44760501:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.750793 0.784652 0.842276 0.884777 0.917235 0.663673 0.0184564 0.96008 0.970314 0.917862 0.951756 0.962245 2166 2168 chr6 44870634 44876665 chr6:44870634-44876665:+:L1PA2:REF 12 + L1PA2 REF full-length SUPT3H 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.411477 0.965227 0.951685 0.951933 0.959037 0.888268 0.633122 0.925052 0.975735 0.955968 0.968971 0.964374 2167 2169 chr6 44878624 44884626 chr6:44878624-44884626:+:L1P3:REF 12 + L1P3 REF full-length SUPT3H 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.884161 0.966054 0.812065 0.912707 0.855072 0.743191 0.117021 0.902622 0.949153 0.933333 0.955437 0.935829 2168 2170 chr6 44884629 44890777 chr6:44884629-44890777:+:L1PA3:REF 12 + L1PA3 REF full-length SUPT3H 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.892655 0.945363 0.853318 0.820939 0.85515 0.656015 0.147605 0.96662 0.974304 0.805869 0.92891 0.983871 2169 2171 chr6 45281107 45287253 chr6:45281107-45287253:+:L1PA4:REF 12 + L1PA4 REF full-length SUPT3H 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890736 0.971564 0.928367 0.955676 0.906452 0.919811 0.860724 0.915789 0.966581 0.945 0.953822 0.959641 2170 2172 chr6 45306651 45308584 chr6:45306651-45308584:+:L1P1:REF 12 + L1P1 REF 3prime-truncated SUPT3H 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.957576 0.978078 0.9568 0.9071 0.857143 0.946636 0.950725 0.839416 0.912351 0.973783 0.854246 0.890688 2171 2173 chr6 45669375 45675401 chr6:45669375-45675401:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.268692 0.863381 0.927434 0.950829 0.954073 0.906355 0.0121422 0.910534 0.930032 0.888889 0.961576 0.643204 2172 2174 chr6 46083235 46086389 chr6:46083235-46086389:-:L1P1:REF 12 - L1P1 REF 3prime-truncated CLIC5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868106 0.615472 0.766859 0.700754 0.632312 0.724771 0.0 0.868056 0.956803 0.807143 0.926154 0.975 2173 2175 chr6 47327837 47333990 chr6:47327837-47333990:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.666667 2174 2176 chr6 48363090 48369117 chr6:48363090-48369117:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.135003 0.706714 0.83399 0.928324 0.545091 0.862765 0.016795 0.821661 0.975316 0.838752 0.789437 0.864785 2175 2177 chr6 48737348 48743377 chr6:48737348-48743377:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.490835 0.503006 0.906054 0.978641 0.672414 0.99061 0.0463768 0.840741 0.976526 0.965385 0.835991 0.963235 2176 2178 chr6 49386880 49392906 chr6:49386880-49392906:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.630499 0.353752 0.770701 0.73338 0.36147 0.827674 0.349381 0.97378 0.708824 0.654327 0.89715 2177 2179 chr6 49791502 49797511 chr6:49791502-49797511:-:L1PA3:REF 12 - L1PA3 REF full-length PGK2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.150494 0.692854 0.792542 0.86941 0.389683 0.910759 0.931114 0.0540541 0.982122 0.83787 0.268917 0.769231 2178 2180 chr6 50223304 50229465 chr6:50223304-50229465:-:L1PA4:REF 11 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.795031 0.0817844 0.272727 0.296935 0.0209974 0.0483871 0.00890208 0.321918 0.434483 0.317549 0.888235 2179 2181 chr6 50343727 50349871 chr6:50343727-50349871:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.89322 0.168847 0.3984 0.372737 0.19244 0.0535211 0.0109409 0.236318 0.477756 0.471154 0.352254 0.83758 2180 2182 chr6 50477537 50483641 chr6:50477537-50483641:+:L1PA4:REF 1 + L1PA4 REF full-length MRC5 0.854545 2181 2183 chr6 50619864 50626003 chr6:50619864-50626003:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878505 0.697498 0.740894 0.776671 0.240803 0.506849 0.00985222 0.658555 0.914106 0.761139 0.77617 0.953846 2182 2184 chr6 51121435 51127584 chr6:51121435-51127584:+:L1PA3:REF 7 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.785714 0.678571 0.588235 0.388747 0.265823 0.604167 0.785047 2183 2185 chr6 51187669 51193819 chr6:51187669-51193819:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.861079 0.771562 0.649554 0.691117 0.375 0.169884 0.633803 0.935007 0.501235 0.633613 0.725875 0.925795 2184 2186 chr6 51224349 51230496 chr6:51224349-51230496:+:L1PA4:REF 11 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.801887 0.836907 0.546906 0.436208 0.427061 0.596 0.862682 0.492308 0.518248 0.662382 0.839056 2185 2187 chr6 51874783 51880802 chr6:51874783-51880802:+:L1HS:REF 9 + L1HS REF full-length PKHD1 2102Ep,HepG2,BJ,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.128889 0.660039 0.626307 0.615979 0.0148026 0.281818 0.92057 0.931391 0.313253 2186 2188 chr6 51895656 51901683 chr6:51895656-51901683:+:L1PA3:REF 11 + L1PA3 REF full-length PKHD1 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.39726 0.667702 0.678756 0.615646 0.571429 0.0151515 0.92623 0.740741 0.644578 0.76555 0.92233 2187 2189 chr6 52090943 52097103 chr6:52090943-52097103:-:L1PA3:REF 12 - L1PA3 REF full-length PKHD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.917938 0.728159 0.697267 0.715697 0.649333 0.432075 0.0144547 0.936782 0.787962 0.709924 0.894951 0.937695 2188 2190 chr6 52771227 52777614 chr6:52771227-52777614:-:L1PA2:REF 12 - L1PA2 REF full-length GSTA2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.793194 0.393939 0.540936 0.553892 0.613537 0.104478 0.0 0.891026 0.954178 0.635417 0.861789 0.852792 2189 2191 chr6 53400050 53406226 chr6:53400050-53406226:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.897233 0.748155 0.825041 0.84273 0.932931 0.811124 0.244074 0.953642 0.95429 0.769373 0.970684 0.938294 2190 2192 chr6 53774041 53780171 chr6:53774041-53780171:+:L1PA4:REF 11 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.943243 0.935698 0.917591 0.94897 0.917343 0.00846024 0.944563 0.976589 0.915254 0.958065 0.975265 2191 2193 chr6 54961429 54967437 chr6:54961429-54967437:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.15 0.768764 0.811098 0.959267 0.811212 0.934 0.0899281 0.943958 0.982374 0.909513 0.88866 0.945378 2192 2194 chr6 55123170 55127526 chr6:55123170-55127526:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated HCRTR2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.840796 0.0142857 0.228261 0.772257 0.204225 0.107955 0.00531915 0.9 0.962121 0.5 0.506757 0.826531 2193 2195 chr6 55363436 55369467 chr6:55363436-55369467:-:L1PA2:REF 12 - L1PA2 REF full-length GFRAL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.125824 0.81265 0.762535 0.897687 0.826025 0.67571 0.00883117 0.897576 0.864564 0.845941 0.843524 0.958098 2194 2196 chr6 55684657 55690687 chr6:55684657-55690687:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908197 0.54755 0.85369 0.969948 0.962406 0.868032 0.0137097 0.337398 0.981803 0.928669 0.972222 0.973333 2195 2197 chr6 56203672 56206697 chr6:56203672-56206697:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated COL21A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.857955 0.0348525 0.645 0.852608 0.723404 0.216 0.0 0.8 0.970339 0.744681 0.931174 0.931624 2196 2198 chr6 56301711 56307870 chr6:56301711-56307870:-:L1PA4:REF 12 - L1PA4 REF full-length COL21A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.755418 0.264038 0.61325 0.731844 0.550736 0.743351 0.00543478 0.796163 0.842258 0.776772 0.611238 0.801782 2197 2199 chr6 57268635 57274780 chr6:57268635-57274780:-:L1PA3:REF 1 - L1PA3 REF full-length LOC100506188 HCT116 0.353535 2198 2200 chr6 57334868 57340871 chr6:57334868-57340871:+:L1PA3:REF 12 + L1PA3 REF full-length PRIM2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.947641 0.97452 0.988206 0.984934 0.965587 0.979127 0.972612 0.974189 0.940234 0.98307 0.973434 0.953079 2199 2201 chr6 57451781 57457923 chr6:57451781-57457923:-:L1PA4:REF 12 - L1PA4 REF full-length PRIM2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.808824 0.971536 0.916667 0.873033 0.807741 0.979893 0.862616 0.898507 0.928191 0.912378 0.839972 0.846756 2200 2202 chr6 57700427 57706542 chr6:57700427-57706542:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895455 0.153346 0.543885 0.682158 0.640389 0.0324675 0.00501672 0.765714 0.939169 0.6 0.724181 0.711111 2201 2203 chr6 58226623 58232747 chr6:58226623-58232747:-:L1PA4:REF 9 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.744898 0.206186 0.449153 0.634804 0.496403 0.17284 0.292135 0.849624 0.446667 2202 2204 chr6 58393798 58399940 chr6:58393798-58399940:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.845992 0.212185 0.669304 0.731076 0.130604 0.509595 0.0106157 0.781106 0.946218 0.742308 0.545038 0.741007 2203 2205 chr6 60344718 60350882 chr6:60344718-60350882:-:L1PA4:REF 11 - L1PA4 REF full-length 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921721 0.550575 0.59369 0.510638 0.232586 0.00650054 0.517391 0.851875 0.644809 0.780838 0.925219 2204 2206 chr6 60599849 60605969 chr6:60599849-60605969:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.847866 0.0264484 0.300676 0.361658 0.0315985 0.0625 0.00477327 0.184066 0.858423 0.230769 0.0797963 0.798165 2205 2207 chr6 60616507 60622518 chr6:60616507-60622518:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.768556 0.489877 0.611111 0.582202 0.414447 0.568677 0.0115254 0.393769 0.861697 0.677812 0.478407 0.779775 2206 2208 chr6 60629792 60635918 chr6:60629792-60635918:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.687638 0.16654 0.269521 0.266396 0.0495726 0.0722689 0.00597015 0.11509 0.746717 0.347992 0.06847 0.772494 2207 2209 chr6 60980953 60987074 chr6:60980953-60987074:-:L1PA4:REF 9 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.816667 0.133929 0.411765 0.394958 0.084507 0.269231 0.202703 0.929293 0.171429 2208 2210 chr6 61047402 61053558 chr6:61047402-61053558:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.705714 0.0257511 0.436819 0.398111 0.0241692 0.159292 0.0138889 0.201527 0.919246 0.513026 0.0546139 0.852174 2209 2211 chr6 61128036 61134432 chr6:61128036-61134432:-:L1PA7:REF 1 - L1PA7 REF full-length HepG2 0.0 2210 2212 chr6 61160548 61163754 chr6:61160548-61163754:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.675883 0.0396825 0.414343 0.369593 0.021978 0.188259 0.0279627 0.149109 0.866402 0.520362 0.167779 0.827465 2211 2213 chr6 61531491 61537897 chr6:61531491-61537897:+:L1PA7:REF 4 + L1PA7 REF full-length KHDRBS2 MRC5,HeLaS3,IMR90,HEK293 0.0601504 0.0 0.151515 0.02 2212 2214 chr6 62087592 62089684 chr6:62087592-62089684:-:L1P3:REF 12 - L1P3 REF 3prime-truncated KHDRBS2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.843537 0.013267 0.161383 0.109589 0.0322581 0.0637255 0.0 0.0916335 0.947368 0.215686 0.313625 0.801075 2213 2215 chr6 62491726 62498187 chr6:62491726-62498187:+:L1PA7:REF 4 + L1PA7 REF full-length HepG2,MRC5,HEK293T,HCT116 0.34375 0.680672 0.302632 0.980769 2214 2216 chr6 62555076 62555453 chr6:62555076-62555453:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872319 0.271651 0.657371 0.715602 0.272194 0.278464 0.0133482 0.506772 0.971963 0.6787 0.670712 0.962719 2215 2217 chr6 62658301 62658303 chr6:62658301-62658303:+:L1HS:NONREF 2 + L1HS KNR euL1db:mrip6839,1KGP:L1_umary_LINE1_1311,Philippe:EXP_ID_1167 HCT116,H1 0.973432 0.972222 Gardner_2017:1,Rodriguez-Martin_2020:2 2216 2218 chr6 62817772 62818916 chr6:62817772-62818916:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.842105 0.232877 0.465116 0.476821 0.0888889 0.0344828 0.0322581 0.275862 0.985075 0.5 0.142857 0.954545 2217 2219 chr6 63052978 63054313 chr6:63052978-63054313:+:L1PA3:REF 11 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.477405 0.0148944 0.467183 0.456371 0.215172 0.255682 0.0034662 0.141732 0.886306 0.491525 0.810918 2218 2220 chr6 63362245 63363929 chr6:63362245-63363929:+:L1PA5:REF 3 + L1PA5 REF 3prime-truncated MRC5,K562,HEK293 0.75 0.0 0.796296 2219 2221 chr6 63848381 63851875 chr6:63848381-63851875:+:L1PA8:REF 2 + L1PA8 REF 3prime-truncated EYS MRC5,HEK293 0.925 0.666667 2220 2222 chr6 64389760 64395796 chr6:64389760-64395796:+:L1PA2:REF 12 + L1PA2 REF full-length EYS 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.172031 0.649631 0.66782 0.882879 0.942573 0.691693 0.0179574 0.202938 0.985169 0.757194 0.875834 0.894828 2221 2223 chr6 64896140 64899388 chr6:64896140-64899388:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated EYS 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.568 0.012487 0.21871 0.382609 0.859285 0.487252 0.00208768 0.766257 0.979814 0.655462 0.537768 0.767619 2222 2224 chr6 66166505 66170098 chr6:66166505-66170098:+:L1PA6:REF 3 + L1PA6 REF 3prime-truncated HepG2,MRC5,K562 0.638298 0.727273 0.0 2223 2225 chr6 66540927 66547077 chr6:66540927-66547077:+:L1PA6:REF 8 + L1PA6 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293 0.142857 0.315789 0.205761 0.373333 0.125 0.0217391 0.25 0.368687 2224 2226 chr6 66630834 66636983 chr6:66630834-66636983:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.530081 0.570949 0.551192 0.733192 0.559735 0.176339 0.0129032 0.754335 0.581998 0.688525 0.437179 0.573668 2225 2227 chr6 67095414 67101549 chr6:67095414-67101549:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.257366 0.0333333 0.137956 0.437309 0.121791 0.0906298 0.164871 0.560947 0.628571 0.218134 0.0906535 0.608025 2226 2228 chr6 67295505 67301096 chr6:67295505-67301096:-:L1PA7:REF 2 - L1PA7 REF 3prime-truncated HepG2,MRC5 0.21519 0.222222 2227 2229 chr6 68283873 68290045 chr6:68283873-68290045:+:L1PA3:REF 12 + L1PA3 REF full-length LINC02549 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.851742 0.175166 0.536401 0.45271 0.472053 0.224924 0.291627 0.771676 0.974007 0.574121 0.450477 0.78769 2228 2230 chr6 69439539 69445568 chr6:69439539-69445568:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.832031 0.306977 0.709677 0.659259 0.653696 0.598485 0.0803571 0.529703 0.956175 0.734568 0.67619 0.854305 2229 2231 chr6 69495362 69500000 chr6:69495362-69500000:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.583691 0.357805 0.601175 0.693878 0.687922 0.301402 0.0195382 0.446686 0.973846 0.619116 0.656117 0.932285 2230 2232 chr6 69515143 69521169 chr6:69515143-69521169:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.235832 0.44634 0.681818 0.747545 0.336359 0.571269 0.0132399 0.76292 0.928745 0.724907 0.651319 0.843788 2231 2233 chr6 70010347 70016552 chr6:70010347-70016552:+:L1HS:REF 12 + L1HS REF full-length COL19A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0883769 0.80047 0.871776 0.796145 0.920116 0.632753 0.019802 0.630199 0.982462 0.825013 0.940249 0.945415 MacFarlane_2013:8,Myers_2002:2 2232 2234 chr6 70317563 70323719 chr6:70317563-70323719:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896552 0.713021 0.782913 0.814996 0.921088 0.489311 0.619427 0.357282 0.826923 0.750988 0.958333 0.958333 2233 2235 chr6 70914791 70920557 chr6:70914791-70920557:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated B3GAT2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.812195 0.0217391 0.417755 0.21519 0.716667 0.048 0.00867052 0.0598007 0.941725 0.494792 0.839709 0.81761 2234 2236 chr6 70944092 70950217 chr6:70944092-70950217:+:L1PA3:REF 12 + L1PA3 REF full-length B3GAT2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929006 0.723799 0.759174 0.82784 0.936044 0.69837 0.015544 0.737397 0.981912 0.825598 0.91564 0.930388 2235 2237 chr6 71270514 71276665 chr6:71270514-71276665:+:L1PA4:REF 11 + L1PA4 REF full-length 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.907478 0.935758 0.963887 0.915604 0.883065 0.0341463 0.82716 0.96713 0.955504 0.962343 0.979215 2236 2238 chr6 71355361 71361788 chr6:71355361-71361788:-:L1PA7:REF 5 - L1PA7 REF full-length 2102Ep,HepG2,MRC5,K562,HCT116 0.411111 0.302326 0.666667 0.0229885 0.787879 2237 2239 chr6 72006343 72012487 chr6:72006343-72012487:+:L1PA4:REF 3 + L1PA4 REF full-length RIMS1 2102Ep,HepG2,MRC5 0.985075 0.012987 0.794702 2238 2240 chr6 72122505 72126122 chr6:72122505-72126122:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated RIMS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.728571 0.0345679 0.389175 0.59621 0.241042 0.071066 0.00348432 0.122642 0.728261 0.707547 0.522193 0.858268 2239 2241 chr6 72469432 72475586 chr6:72469432-72475586:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890675 0.391213 0.952899 0.923655 0.805364 0.509653 0.89507 0.31746 0.835443 0.945419 0.853543 0.95672 2240 2242 chr6 72570139 72576167 chr6:72570139-72576167:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0913838 0.752809 0.973859 0.969388 0.902447 0.757487 0.953676 0.585691 0.944785 0.957709 0.956044 0.934476 2241 2243 chr6 72988654 72994686 chr6:72988654-72994686:-:L1HS:REF 12 - L1HS REF full-length KCNQ5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0973872 0.882568 0.978203 0.971724 0.969035 0.837784 0.43709 0.90608 0.918594 0.956324 0.973387 0.963208 Brouha_2003:0.0 2242 2244 chr6 73835382 73841425 chr6:73835382-73841425:-:L1PA2:REF 12 - L1PA2 REF full-length CD109 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.316707 0.759774 0.929562 0.889604 0.222261 0.886826 0.0132275 0.445535 0.884038 0.9232 0.928366 0.785763 2243 2245 chr6 73917512 73923690 chr6:73917512-73923690:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.795276 0.322581 0.467742 0.797872 0.15 0.166667 0.0 0.513514 0.971014 0.472222 0.929825 2244 2246 chr6 74013311 74013637 chr6:74013311-74013637:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910323 0.466597 0.933252 0.966757 0.498667 0.693273 0.0734017 0.945274 0.980254 0.893706 0.789962 0.960204 2245 2247 chr6 74026849 74030817 chr6:74026849-74030817:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.811203 0.0846774 0.701031 0.841509 0.215781 0.416901 0.00408163 0.475504 0.969072 0.840909 0.462639 0.875 2246 2248 chr6 74337744 74343920 chr6:74337744-74343920:-:L1PA5:REF 12 - L1PA5 REF full-length LOC101928516 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909692 0.0884451 0.876733 0.940932 0.0562701 0.547804 0.00232019 0.561772 0.736842 0.918803 0.411765 0.936759 2247 2249 chr6 74660015 74666151 chr6:74660015-74666151:+:L1PA4:REF 12 + L1PA4 REF full-length LOC101928516 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.86828 0.17551 0.880446 0.914401 0.0487541 0.80863 0.00603136 0.36 0.948823 0.923567 0.530732 0.888143 2248 2250 chr6 74903761 74909912 chr6:74903761-74909912:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.893484 0.804491 0.959792 0.963425 0.558891 0.971631 0.0259434 0.887324 0.985836 0.966752 0.804878 0.975845 2249 2251 chr6 75899741 75905745 chr6:75899741-75905745:-:L1PA3:REF 11 - L1PA3 REF full-length MYO6 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919829 0.9875 0.974542 0.982456 0.978852 0.256827 0.251603 0.986403 0.98079 0.98648 0.934031 2250 2252 chr6 76105618 76111641 chr6:76105618-76111641:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.522876 0.514085 0.77686 0.8 0.619048 0.603306 0.00833333 0.763359 0.988889 0.858156 0.827309 0.901734 2251 2253 chr6 76137899 76143882 chr6:76137899-76143882:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.860024 0.0348162 0.449896 0.469127 0.0131332 0.0676568 0.00423729 0.737226 0.932584 0.521964 0.287523 0.922581 2252 2254 chr6 76369432 76375591 chr6:76369432-76375591:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896254 0.304587 0.602649 0.735925 0.5 0.346008 0.00881057 0.881757 0.978571 0.634783 0.710526 0.946237 2253 2255 chr6 76875759 76877075 chr6:76875759-76877075:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0879121 0.622926 0.588976 0.684676 0.00179372 0.885463 0.120968 0.00958904 0.987675 0.684882 0.893851 0.0759219 2254 2256 chr6 76900222 76906229 chr6:76900222-76906229:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.821699 0.540408 0.832536 0.706399 0.604134 0.665842 0.0171891 0.190455 0.977185 0.848129 0.748621 0.962255 2255 2257 chr6 76958965 76964983 chr6:76958965-76964983:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.399579 0.767306 0.819012 0.799937 0.753846 0.744966 0.0137795 0.839818 0.982696 0.936681 0.870403 0.95559 2256 2258 chr6 77082477 77088496 chr6:77082477-77088496:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.134247 0.501373 0.705652 0.744186 0.751617 0.0153061 0.504907 0.979695 0.850082 0.890102 0.943089 2257 2259 chr6 77251532 77257669 chr6:77251532-77257669:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.728346 0.73913 0.64557 0.734353 0.904523 0.898551 0.023622 0.681373 0.979381 0.796875 0.960123 0.981481 2258 2260 chr6 77699491 77700741 chr6:77699491-77700741:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated MEI4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.916124 0.638374 0.746637 0.714923 0.403202 0.508565 0.0192476 0.00591133 0.977528 0.748457 0.758595 0.953198 2259 2261 chr6 77730626 77736661 chr6:77730626-77736661:-:L1PA3:REF 7 - L1PA3 REF full-length MEI4 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116 0.923077 0.68 0.780142 0.781186 0.603352 0.013986 0.823256 2260 2262 chr6 77798491 77804602 chr6:77798491-77804602:-:L1PA3:REF 11 - L1PA3 REF full-length MEI4 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.920949 0.867679 0.721106 0.651911 0.361783 0.031746 0.600406 0.967552 0.704134 0.621721 0.957169 2261 2263 chr6 77862081 77868224 chr6:77862081-77868224:+:L1PA4:REF 12 + L1PA4 REF full-length MEI4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901153 0.48338 0.4034 0.363027 0.0682148 0.0805369 0.00801603 0.26087 0.969651 0.371257 0.202514 0.90625 2262 2264 chr6 77991081 77997193 chr6:77991081-77997193:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.942337 0.515294 0.802737 0.770164 0.430836 0.359465 0.00722022 0.721627 0.981791 0.83125 0.729947 0.965608 2263 2265 chr6 78467208 78473345 chr6:78467208-78473345:+:L1PA4:REF 8 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,MCF7,HCT116,HEK293 0.657143 0.297872 0.745763 0.806167 0.15 0.640625 0.984375 0.560606 2264 2266 chr6 78646742 78652881 chr6:78646742-78652881:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.532258 0.0691676 0.647426 0.585217 0.190698 0.244898 0.0155556 0.0149573 0.808276 0.598945 0.6298 0.837662 2265 2267 chr6 78694312 78700460 chr6:78694312-78700460:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.8375 0.298438 0.505597 0.555783 0.0304762 0.09 0.0 0.875 0.852273 0.6375 0.325744 0.840304 2266 2268 chr6 78802650 78808101 chr6:78802650-78808101:-:L1PA7:REF 11 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.83871 0.0231481 0.430279 0.69986 0.0932476 0.261364 0.00456621 0.978125 0.610294 0.408824 0.929487 2267 2269 chr6 78877511 78879112 chr6:78877511-78879112:+:L1P2:REF 1 + L1P2 REF 3prime-truncated IRAK1BP1 MRC5 0.968 2268 2270 chr6 78920945 78924807 chr6:78920945-78924807:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated PHIP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898785 0.062603 0.763889 0.823884 0.847512 0.102236 0.0214477 0.961538 0.973231 0.811111 0.893082 0.961832 2269 2271 chr6 79284672 79290791 chr6:79284672-79290791:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.934078 0.530222 0.73407 0.673673 0.825573 0.751012 0.0134983 0.958034 0.959641 0.740594 0.897792 0.932787 2270 2272 chr6 79319638 79325774 chr6:79319638-79325774:-:L1PA4:REF 12 - L1PA4 REF full-length LCAL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.837563 0.328947 0.524691 0.530097 0.516364 0.588235 0.0138889 0.909722 0.77381 0.595238 0.735294 0.9375 2271 2273 chr6 79363357 79369020 chr6:79363357-79369020:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.717791 0.0202429 0.118557 0.0685279 0.316667 0.535088 0.00641026 0.461538 0.953488 0.11828 0.388889 0.710843 2272 2274 chr6 79577656 79583766 chr6:79577656-79583766:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.00454545 2273 2275 chr6 80051360 80054519 chr6:80051360-80054519:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated TTK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.935484 0.977723 0.96723 0.980858 0.978002 0.838403 0.667925 0.976744 0.970921 0.980892 0.96988 0.963035 2274 2276 chr6 80492276 80498296 chr6:80492276-80498296:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.591168 0.865724 0.908123 0.932073 0.812568 0.876155 0.0267738 0.945591 0.966799 0.820093 0.861835 0.955381 2275 2277 chr6 80567938 80573945 chr6:80567938-80573945:-:L1PA3:REF 9 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.523179 0.688034 0.9125 0.786036 0.140909 0.893048 0.974093 0.764045 0.791878 2276 2278 chr6 80612144 80618209 chr6:80612144-80618209:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90625 0.439024 0.898438 0.930159 0.421429 0.66129 0.0185185 0.697674 0.917808 0.833333 0.431507 0.891304 2277 2279 chr6 80783040 80785157 chr6:80783040-80785157:+:L1P1:REF 3 + L1P1 REF 3prime-truncated HepG2,MRC5,HCT116 0.666667 0.947368 0.978723 2278 2280 chr6 80847739 80853776 chr6:80847739-80853776:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.917462 0.625426 0.86025 0.892056 0.536303 0.883663 0.0172549 0.949267 0.979675 0.80241 0.71342 0.959767 2279 2281 chr6 81112065 81118183 chr6:81112065-81118183:-:L1PA5:REF 2 - L1PA5 REF full-length MRC5,HCT116 0.640449 0.928571 2280 2282 chr6 81433358 81436998 chr6:81433358-81436998:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.789182 0.561955 0.797118 0.587806 0.212087 0.768868 0.0119205 0.934513 0.825666 0.661605 0.467449 0.775862 2281 2283 chr6 81869293 81875745 chr6:81869293-81875745:+:L1PA7:REF 12 + L1PA7 REF full-length LINC02542 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.867521 0.942263 0.963504 0.746789 0.69103 0.946341 0.0571429 0.917127 0.949821 0.776224 0.907407 0.96875 2282 2284 chr6 81953035 81959176 chr6:81953035-81959176:-:L1PA5:REF 12 - L1PA5 REF full-length LINC02542 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.932292 0.90542 0.917826 0.83076 0.574163 0.931646 0.173701 0.941748 0.966781 0.825397 0.828544 0.976134 2283 2285 chr6 82101303 82107312 chr6:82101303-82107312:+:L1PA2:REF 12 + L1PA2 REF full-length LINC02542 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.132386 0.0589164 0.923119 0.835141 0.0966811 0.9375 0.0179506 0.240391 0.982839 0.884384 0.954683 0.941302 2284 2286 chr6 82150919 82152109 chr6:82150919-82152109:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.622222 0.78 0.8125 0.629454 0.666667 0.9 0.461538 0.972222 1.0 0.873016 0.857143 0.888889 2285 2287 chr6 82469506 82475649 chr6:82469506-82475649:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.627119 0.181818 0.597561 0.46473 0.397959 0.494118 0.0315789 0.610526 0.727273 0.587786 0.626168 0.767857 2286 2288 chr6 82558403 82564423 chr6:82558403-82564423:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.253906 0.68442 0.918089 0.82675 0.651909 0.797166 0.0248528 0.980198 0.962823 0.85258 0.972623 0.900606 2287 2289 chr6 83287157 83293277 chr6:83287157-83293277:-:L1PA7:REF 1 - L1PA7 REF full-length ME1 MRC5 0.66087 2288 2290 chr6 83320859 83326904 chr6:83320859-83326904:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated ME1 MRC5 0.818182 2289 2291 chr6 83333952 83339981 chr6:83333952-83339981:+:L1HS:REF 12 + L1HS REF full-length ME1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.176198 0.839929 0.955385 0.981073 0.489371 0.967718 0.885817 0.795712 0.986098 0.962478 0.984962 0.937799 2290 2292 chr6 83495670 83500000 chr6:83495670-83500000:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.914685 0.617849 0.804878 0.804225 0.912488 0.75817 0.103693 0.935725 0.965116 0.900249 0.931217 0.937093 2291 2293 chr6 84129751 84133988 chr6:84129751-84133988:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated CEP162 MRC5 0.976744 2292 2294 chr6 84133994 84134809 chr6:84133994-84134809:-:L1P3:REF 2 - L1P3 REF 3prime-truncated CEP162 MRC5,IMR90 0.097561 1.0 2293 2295 chr6 84608436 84614463 chr6:84608436-84614463:+:L1HS:REF 1 + L1HS REF full-length K562 0.0772128 2294 2296 chr6 84626355 84632366 chr6:84626355-84632366:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.104089 0.849298 0.983032 0.968576 0.832846 0.0204646 0.196475 0.920445 0.929464 0.883991 0.930299 2295 2297 chr6 85307045 85313201 chr6:85307045-85313201:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.581897 0.399381 0.542373 0.492201 0.418868 0.441489 0.0184332 0.546584 0.684211 0.546875 0.566038 2296 2298 chr6 85377220 85380046 chr6:85377220-85380046:+:L1P1:REF 12 + L1P1 REF 3prime-truncated LINC02535 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.884375 0.639241 0.883495 0.893785 0.594502 0.813842 0.00914077 0.82793 0.865546 0.872818 0.838235 0.888889 2297 2299 chr6 85751661 85755015 chr6:85751661-85755015:+:L1P2:REF 11 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.931818 0.59 0.697368 0.372951 0.0636364 0.00543478 0.886792 0.946058 0.644231 0.715867 0.784091 2298 2300 chr6 85815945 85822083 chr6:85815945-85822083:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.867987 0.275184 0.52381 0.666667 0.0914127 0.160494 0.00716846 0.744186 0.850704 0.611111 0.329082 0.810345 2299 2301 chr6 85857293 85863437 chr6:85857293-85863437:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.840933 0.376987 0.702454 0.822235 0.208466 0.447761 0.0110497 0.790531 0.612546 0.82377 0.773845 0.791469 2300 2302 chr6 85895195 85897108 chr6:85895195-85897108:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91358 0.0630631 0.25 0.115207 0.0 0.0263158 0.0 0.735294 0.333333 0.44898 0.0 0.534884 2301 2303 chr6 85930759 85936589 chr6:85930759-85936589:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.790164 0.186644 0.50565 0.57371 0.0686567 0.297297 0.00314465 0.75 0.583333 0.576159 0.183258 0.644444 2302 2304 chr6 85952904 85959050 chr6:85952904-85959050:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.790997 0.176471 0.355556 0.455939 0.0243902 0.0344828 0.0 0.527778 0.286164 0.477941 0.349869 0.794118 2303 2305 chr6 86000000 86005073 chr6:86000000-86005073:-:L1HS:REF 10 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293 0.137255 0.688427 0.880788 0.790698 0.427027 0.825806 0.0642202 0.727273 0.95611 0.908629 2304 2306 chr6 86021488 86027515 chr6:86021488-86027515:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.266667 0.691334 0.701972 0.721097 0.440075 0.461997 0.0132939 0.798892 0.865967 0.668552 0.734108 0.874703 2305 2307 chr6 86051815 86057959 chr6:86051815-86057959:-:L1PA3:REF 1 - L1PA3 REF full-length MRC5 0.627615 2306 2308 chr6 86253380 86253650 chr6:86253380-86253650:+:L1P1:REF 5 + L1P1 REF 3prime-truncated 2102Ep,BJ,HEK293T,IMR90,HEK293 0.875 0.482014 0.0784508 0.544118 0.276042 2307 2309 chr6 86304469 86307352 chr6:86304469-86307352:-:L1PA7:REF 7 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.923077 0.0 0.333333 0.382353 0.0666667 0.105263 0.210526 2308 2310 chr6 86492121 86498254 chr6:86492121-86498254:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.820856 0.342056 0.427553 0.414127 0.14447 0.263374 0.0178042 0.764444 0.488372 0.388889 0.288889 0.687783 2309 2311 chr6 86569573 86575720 chr6:86569573-86575720:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885246 0.431239 0.554688 0.62963 0.214751 0.212871 0.0160643 0.903955 0.652 0.658654 0.510721 0.881148 2310 2312 chr6 86665208 86671238 chr6:86665208-86671238:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.839529 0.423345 0.616068 0.67552 0.240741 0.289708 0.427869 0.926457 0.756991 0.645408 0.580023 0.878075 2311 2313 chr6 86731396 86732970 chr6:86731396-86732970:+:L1PA3:REF 9 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.925926 0.578431 0.566667 0.648276 0.473282 0.863636 0.666667 0.580645 0.578431 2312 2314 chr6 86806663 86812682 chr6:86806663-86812682:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.345178 0.779755 0.747948 0.744309 0.468531 0.601179 0.0139721 0.89392 0.802048 0.774278 0.678112 0.757143 2313 2315 chr6 86812682 86816094 chr6:86812682-86816094:-:L1PA7:REF 11 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.605634 0.0784314 0.425 0.231454 0.0704225 0.0892857 0.0 0.213592 0.372881 0.05625 0.833333 2314 2316 chr6 86872827 86876086 chr6:86872827-86876086:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873409 0.31386 0.699083 0.700138 0.129456 0.322398 0.00505476 0.60625 0.833209 0.689367 0.550179 0.829733 2315 2317 chr6 86897717 86903738 chr6:86897717-86903738:+:L1PA2:REF 11 + L1PA2 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.695283 0.680639 0.594479 0.561185 0.58194 0.00345224 0.587432 0.875561 0.659259 0.685185 0.691781 2316 2318 chr6 86921165 86927317 chr6:86921165-86927317:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.746385 0.404487 0.534286 0.482623 0.363251 0.229102 0.00857449 0.889034 0.372351 0.542146 0.682886 0.818594 2317 2319 chr6 87139685 87145758 chr6:87139685-87145758:+:L1PA6:REF 12 + L1PA6 REF full-length ZNF292 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856061 0.294118 0.699115 0.680217 0.41844 0.0952381 0.047619 0.333333 0.303226 0.806452 0.683258 0.888889 2318 2320 chr6 87323278 87329278 chr6:87323278-87329278:-:L1PA3:REF 12 - L1PA3 REF full-length GJB7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0868984 0.969669 0.968523 0.969622 0.453883 0.424296 0.907407 0.713018 0.980916 0.880829 0.939262 0.875306 2319 2321 chr6 88253620 88259773 chr6:88253620-88259773:+:L1PA6:REF 3 + L1PA6 REF full-length MRC5,IMR90,HEK293 0.657143 0.634615 0.814516 2320 2322 chr6 88350814 88352662 chr6:88350814-88352662:+:L1PA3:REF 11 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.832103 0.660044 0.746867 0.665477 0.396414 0.432692 0.487805 0.8 0.702586 0.770563 0.853881 2321 2323 chr6 88521207 88527351 chr6:88521207-88527351:-:L1PA3:REF 6 - L1PA3 REF full-length LOC101928936 2102Ep,HepG2,MRC5,HEK293T,HCT116,HEK293 0.855856 0.572727 0.817568 0.642105 0.961538 0.735849 2322 2324 chr6 89225263 89231287 chr6:89225263-89231287:-:L1PA2:REF 12 - L1PA2 REF full-length GABRR1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.134167 0.889173 0.86497 0.888889 0.867883 0.868051 0.286424 0.94519 0.977273 0.865889 0.959317 0.878092 2323 2325 chr6 90053981 90060141 chr6:90053981-90060141:+:L1PA4:REF 12 + L1PA4 REF full-length BACH2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.850352 0.807155 0.895016 0.857908 0.937165 0.612753 0.390117 0.668299 0.924721 0.894495 0.961607 0.973451 2324 2326 chr6 90733744 90740207 chr6:90733744-90740207:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.338462 0.0222222 0.0632911 0.114754 0.877551 0.0 0.0 0.05 0.906977 0.344828 0.514286 0.636364 2325 2327 chr6 91047151 91053161 chr6:91047151-91053161:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0960744 0.673691 0.724876 0.86687 0.212532 0.574163 0.00534759 0.865079 0.980851 0.766932 0.95677 0.919626 2326 2328 chr6 91589964 91591707 chr6:91589964-91591707:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.867133 0.919056 0.762452 0.812234 0.921241 0.975524 0.0188679 0.821826 0.982456 0.914384 0.824017 0.818182 2327 2329 chr6 92078286 92084443 chr6:92078286-92084443:+:L1PA6:REF 2 + L1PA6 REF full-length MRC5,HEK293 0.357143 0.166667 2328 2330 chr6 93631588 93637609 chr6:93631588-93637609:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0548474 0.871724 0.886758 0.912468 0.760206 0.952899 0.0936192 0.928937 0.955224 0.909192 0.975289 0.960409 2329 2331 chr6 93865738 93871783 chr6:93865738-93871783:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.208546 0.792593 0.683706 0.745587 0.75459 0.877502 0.0114329 0.776139 0.818336 0.8026 0.89265 0.879397 Philippe_2016:1 2330 2332 chr6 94197995 94204060 chr6:94197995-94204060:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.076326 0.787676 0.837618 0.882893 0.853225 0.795051 0.0239708 0.728212 0.986739 0.901811 0.87941 0.963731 2331 2333 chr6 94824163 94830307 chr6:94824163-94830307:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.607211 0.62069 0.746903 0.847059 0.841016 0.778853 0.00785855 0.814215 0.982105 0.862222 0.834655 0.94729 2332 2334 chr6 94851129 94857158 chr6:94851129-94857158:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.848241 0.75811 0.734234 0.820526 0.810989 0.718023 0.0136674 0.453057 0.97757 0.771777 0.697962 0.96 2333 2335 chr6 94869039 94874443 chr6:94869039-94874443:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.606635 0.215434 0.27572 0.64 0.530303 0.214286 0.0377358 0.324742 0.974747 0.615385 0.582645 0.920792 2334 2336 chr6 95453247 95454707 chr6:95453247-95454707:-:L1P3:REF 11 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.806452 0.0192308 0.107143 0.171171 0.341463 0.0833333 0.0 0.657143 1.0 0.115385 0.0 2335 2337 chr6 95758386 95764412 chr6:95758386-95764412:+:L1PA2:REF 7 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,HCT116,HEK293 0.019544 0.980456 0.75969 0.772171 0.673171 0.994872 0.860465 2336 2338 chr6 96478157 96479355 chr6:96478157-96479355:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873737 0.0241379 0.450413 0.53211 0.127358 0.0655738 0.0 0.966667 0.974359 0.676471 0.398305 0.966102 2337 2339 chr6 96500000 96500444 chr6:96500000-96500444:-:L1P2:REF 8 - L1P2 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293 0.953333 0.811321 0.899083 0.763158 0.568421 0.355556 0.94186 0.923664 2338 2340 chr6 96982567 96987020 chr6:96982567-96987020:-:L1P1:REF 12 - L1P1 REF 3prime-truncated KLHL32 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.822142 0.47619 0.703901 0.732075 0.547036 0.518349 0.10596 0.526157 0.972477 0.522184 0.838954 0.930061 2339 2341 chr6 97376538 97382707 chr6:97376538-97382707:-:L1PA3:REF 12 - L1PA3 REF full-length LOC101927314 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.812676 0.357839 0.7154 0.766482 0.839135 0.409405 0.0189798 0.587766 0.968037 0.738337 0.899914 0.936275 2340 2342 chr6 97794643 97800532 chr6:97794643-97800532:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.862745 0.0166667 0.373874 0.41875 0.414433 0.227941 0.0 0.15534 0.971111 0.495935 0.741551 0.93299 2341 2343 chr6 98083035 98089205 chr6:98083035-98089205:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923642 0.306613 0.562802 0.482972 0.489774 0.371747 0.00662252 0.489185 0.93526 0.532808 0.632963 0.905908 2342 2344 chr6 98416502 98422520 chr6:98416502-98422520:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.238938 0.789572 0.391304 0.736306 0.52673 0.583916 0.0132353 0.68246 0.976412 0.718062 0.907585 0.945486 2343 2345 chr6 98703059 98708329 chr6:98703059-98708329:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.154047 0.853597 0.817818 0.787048 0.362651 0.762998 0.0140384 0.811195 0.972046 0.839854 0.959076 0.935396 2344 2346 chr6 99204281 99210436 chr6:99204281-99210436:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.83159 0.640101 0.66178 0.688375 0.52094 0.371115 0.0760563 0.765133 0.943978 0.710714 0.76087 0.923664 2345 2347 chr6 99823597 99829594 chr6:99823597-99829594:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.0722222 0.0145349 0.101732 0.659627 0.0530822 0.878906 0.00966184 0.395604 0.918984 0.034965 0.62069 2346 2348 chr6 99925836 99931990 chr6:99925836-99931990:-:L1PA3:REF 12 - L1PA3 REF full-length MCHR2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.812467 0.780337 0.973388 0.94152 0.82516 0.767221 0.00511509 0.809222 0.974284 0.898577 0.881008 0.964371 2347 2349 chr6 99969576 99975717 chr6:99969576-99975717:-:L1PA4:REF 11 - L1PA4 REF full-length MCHR2 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889107 0.774603 0.749136 0.373134 0.43949 0.0117521 0.796574 0.969983 0.662028 0.654046 0.955117 2348 2350 chr6 100196461 100202490 chr6:100196461-100202490:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0800405 0.930041 0.985094 0.977582 0.567914 0.941368 0.884615 0.916162 0.482345 0.969343 0.971873 0.953662 2349 2351 chr6 100354703 100360725 chr6:100354703-100360725:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.134912 0.889952 0.972354 0.979432 0.878154 0.893484 0.073499 0.961006 0.981524 0.951402 0.972071 0.858586 2350 2352 chr6 100580586 100586736 chr6:100580586-100586736:-:L1PA3:REF 12 - L1PA3 REF full-length ASCC3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.758621 0.985401 0.809211 0.987226 0.862857 0.925926 0.835165 0.803279 0.97191 0.827586 0.919753 0.915789 2351 2353 chr6 100908125 100914267 chr6:100908125-100914267:-:L1PA4:REF 1 - L1PA4 REF full-length MRC5 0.237903 2352 2354 chr6 101028531 101031465 chr6:101028531-101031465:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.857482 0.289431 0.771739 0.801144 0.834906 0.955556 0.00961538 0.931092 0.90973 0.781784 0.793207 0.888172 2353 2355 chr6 101048507 101054605 chr6:101048507-101054605:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.494845 0.0204918 0.452229 0.66581 0.307692 0.518519 0.00900901 0.775 0.623077 0.382979 0.388601 0.625 2354 2356 chr6 101062008 101065667 chr6:101062008-101065667:+:L1PA6:REF 1 + L1PA6 REF 3prime-truncated MRC5 0.0 2355 2357 chr6 101152252 101158269 chr6:101152252-101158269:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.874074 0.591463 0.875994 0.801642 0.704248 0.81422 0.0166667 0.832653 0.952614 0.751773 0.708914 0.971429 2356 2358 chr6 101659470 101661929 chr6:101659470-101661929:-:L1P3:REF 11 - L1P3 REF 3prime-truncated GRIK2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.884615 0.0628571 0.907692 0.798148 0.536 0.88 0.0 0.897727 0.954545 0.870588 0.377778 2357 2359 chr6 101788209 101794361 chr6:101788209-101794361:-:L1PA3:REF 12 - L1PA3 REF full-length GRIK2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.855734 0.631553 0.928973 0.9291 0.73175 0.978176 0.0114695 0.901299 0.923848 0.916667 0.823687 0.972472 2358 2360 chr6 102088197 102094226 chr6:102088197-102094226:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.813861 0.672043 0.80994 0.796989 0.731143 0.927298 0.00561272 0.914151 0.975265 0.745789 0.656455 0.916667 2359 2361 chr6 102398209 102398211 chr6:102398209-102398211:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip6985,1KGP:L1_umary_LINE1_1370,Philippe:EXP_ID_1207 BJ,HCT116 0.851574 0.986823 Rodriguez-Martin_2020:4 2360 2362 chr6 102722105 102725773 chr6:102722105-102725773:+:L1PA2:REF 8 + L1PA2 REF 3prime-truncated BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.810078 0.934397 0.953908 0.952096 0.964103 0.976654 0.806202 0.841727 2361 2363 chr6 102752889 102758907 chr6:102752889-102758907:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.147727 0.780418 0.822532 0.926843 0.932088 0.914132 0.00899743 0.975684 0.885226 0.792208 0.820717 0.969697 2362 2364 chr6 103709031 103715056 chr6:103709031-103715056:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.47018 0.832799 0.829393 0.757648 0.910405 0.927419 0.0234114 0.904233 0.983425 0.837433 0.817033 0.913183 2363 2365 chr6 104374607 104380755 chr6:104374607-104380755:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.799821 0.217054 0.572119 0.497699 0.532748 0.778894 0.0869565 0.355872 0.928196 0.495667 0.436059 0.791813 2364 2366 chr6 104489393 104495424 chr6:104489393-104495424:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.119403 0.851984 0.899748 0.873069 0.886387 0.933304 0.0148576 0.930772 0.977273 0.834856 0.937824 0.959222 2365 2367 chr6 104670787 104677213 chr6:104670787-104677213:+:L1PA7:REF 9 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.775 0.240741 0.615385 0.61597 0.75 0.725 0.909091 0.972222 0.628788 2366 2368 chr6 104737315 104743324 chr6:104737315-104743324:+:L1PA2:REF 12 + L1PA2 REF full-length HACE1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.108804 0.978131 0.984962 0.983312 0.957675 0.88006 0.943442 0.977778 0.93188 0.975362 0.969065 0.952427 2367 2369 chr6 104756574 104762708 chr6:104756574-104762708:+:L1PA7:REF 12 + L1PA7 REF full-length HACE1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.954114 0.984093 0.967236 0.974385 0.956927 0.963107 0.890183 0.988942 0.983957 0.965517 0.976378 0.979412 2368 2370 chr6 105716122 105722275 chr6:105716122-105722275:+:L1PA3:REF 10 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.408922 0.480392 0.857143 0.808756 0.821782 0.116883 0.361345 0.744792 0.820809 0.911565 2369 2371 chr6 106404578 106411023 chr6:106404578-106411023:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.912698 0.268116 0.564103 0.615385 0.790541 0.648649 0.08 0.971014 0.962121 0.661017 0.903448 0.952381 2370 2372 chr6 107166663 107170611 chr6:107166663-107170611:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated PDSS2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898667 0.98366 0.96124 0.982342 0.96994 0.971098 0.83871 0.974359 0.988212 0.991525 0.973545 0.956522 2371 2373 chr6 107854715 107860748 chr6:107854715-107860748:-:L1PA3:REF 11 - L1PA3 REF full-length SEC63 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.20642 0.00852619 0.9108 0.855161 0.949585 0.481862 0.975689 0.796035 0.884688 0.970714 0.936444 2372 2374 chr6 108410815 108416935 chr6:108410815-108416935:+:L1PA5:REF 12 + L1PA5 REF full-length AFG1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872611 0.979058 0.963576 0.802875 0.975 0.983333 0.976589 0.961538 0.957143 0.889831 0.958869 0.966216 2373 2375 chr6 109245218 109251251 chr6:109245218-109251251:-:L1PA2:REF 12 - L1PA2 REF full-length CCDC162P 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0891304 0.0111524 0.873087 0.923038 0.0212766 0.955763 0.904943 0.0363636 0.93899 0.853859 0.957226 0.847953 2374 2376 chr6 109534604 109540728 chr6:109534604-109540728:-:L1PA5:REF 12 - L1PA5 REF full-length AK9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.857143 0.329268 0.59276 0.699001 0.573712 0.417969 0.0113314 0.624561 0.816229 0.617778 0.812227 0.775934 2375 2377 chr6 109640162 109640567 chr6:109640162-109640567:-:L1PA6:REF 2 - L1PA6 REF 3prime-truncated AK9 MRC5,HEK293 0.810811 1.0 2376 2378 chr6 109645087 109651236 chr6:109645087-109651236:+:L1PA4:REF 1 + L1PA4 REF full-length AK9 MRC5 0.241463 2377 2379 chr6 109678655 109682143 chr6:109678655-109682143:+:L1PA7:REF 6 + L1PA7 REF 3prime-truncated AK9 2102Ep,HepG2,MRC5,HEK293T,K562,HEK293 0.238095 0.155556 0.787234 0.754386 0.142857 0.880952 2378 2380 chr6 111505512 111507862 chr6:111505512-111507862:-:L1P2:REF 12 - L1P2 REF 3prime-truncated TRAF3IP2-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.922374 0.964072 0.970085 0.976068 0.97411 0.963504 0.9 0.965217 0.948 0.971429 0.952632 0.927273 2379 2381 chr6 111903001 111909020 chr6:111903001-111909020:-:L1PA2:REF 12 - L1PA2 REF full-length LINC02527 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.151053 0.935882 0.960973 0.953683 0.859085 0.979887 0.407867 0.972202 0.978692 0.969697 0.980237 0.911377 2380 2382 chr6 111929039 111935422 chr6:111929039-111935422:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.810606 0.177419 0.642276 0.791237 0.731481 0.47619 0.0 0.882883 0.941176 0.837838 0.708333 0.913043 2381 2383 chr6 112421100 112426517 chr6:112421100-112426517:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.855457 0.0187354 0.920988 0.883721 0.850082 0.332046 0.0 0.299479 0.962302 0.957655 0.941441 0.956522 2382 2384 chr6 112703745 112709778 chr6:112703745-112709778:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.111705 0.502636 0.866335 0.939909 0.955424 0.614254 0.284363 0.770607 0.908079 0.902037 0.905369 0.893967 2383 2385 chr6 112813021 112819047 chr6:112813021-112819047:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.132791 0.808327 0.953846 0.975527 0.909011 0.649863 0.0489604 0.245575 0.977928 0.956735 0.938617 0.853081 2384 2386 chr6 113226487 113232515 chr6:113226487-113232515:+:L1PA2:REF 4 + L1PA2 REF full-length MRC5,HEK293T,MCF7,HCT116 0.963526 0.981651 0.954545 0.968992 2385 2387 chr6 113531117 113537147 chr6:113531117-113537147:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.24183 0.935446 0.958528 0.966245 0.853708 0.967972 0.0581114 0.0223464 0.981508 0.956466 0.93763 0.881783 2386 2388 chr6 114628020 114634115 chr6:114628020-114634115:-:L1PA6:REF 2 - L1PA6 REF full-length MRC5,HEK293 0.460317 0.769231 2387 2389 chr6 114720722 114726752 chr6:114720722-114726752:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.75 0.827586 0.813725 0.78202 0.816254 0.578378 0.0183486 0.866667 0.893617 0.747899 0.73125 2388 2390 chr6 114799879 114806049 chr6:114799879-114806049:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91443 0.849558 0.80198 0.871681 0.629828 0.453883 0.00641026 0.659774 0.87766 0.831522 0.834184 0.973025 2389 2391 chr6 114865297 114865826 chr6:114865297-114865826:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.861768 0.42543 0.581536 0.638201 0.500397 0.441899 0.0288462 0.77193 0.774631 0.633083 0.546917 0.935264 2390 2392 chr6 114970386 114976401 chr6:114970386-114976401:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.782278 0.795613 0.793053 0.745998 0.71461 0.487018 0.0145329 0.850736 0.789157 0.711089 0.73542 0.938878 2391 2393 chr6 115121250 115125215 chr6:115121250-115125215:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911483 0.444799 0.66067 0.691688 0.505218 0.202405 0.0161054 0.110717 0.840051 0.685745 0.682429 0.939646 2392 2394 chr6 115175227 115181228 chr6:115175227-115181228:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.897019 0.64745 0.764085 0.765909 0.69916 0.656627 0.021164 0.905759 0.936909 0.851429 0.849485 0.949153 2393 2395 chr6 115222081 115228219 chr6:115222081-115228219:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.862069 0.0186047 0.190678 0.202055 0.113553 0.00961538 0.035461 0.57931 0.535294 0.163636 0.0983607 0.888112 2394 2396 chr6 115250072 115256240 chr6:115250072-115256240:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.853659 0.633663 0.641167 0.525526 0.413793 0.255181 0.00737101 0.7252 0.571291 0.578431 0.513796 0.908578 2395 2397 chr6 115391257 115395055 chr6:115391257-115395055:-:L1P3:REF 11 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.863636 0.0 0.392857 0.423729 0.5 0.0 0.0 0.777778 0.594595 0.0666667 0.351351 2396 2398 chr6 115644847 115649287 chr6:115644847-115649287:+:L1P3:REF 12 + L1P3 REF 3prime-truncated LINC02534 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878594 0.369512 0.815789 0.841732 0.802133 0.0923913 0.00787402 0.962644 0.864376 0.732143 0.665775 0.936508 2397 2399 chr6 115960032 115966060 chr6:115960032-115966060:+:L1PA2:REF 12 + L1PA2 REF full-length FRK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.145308 0.979007 0.864232 0.875808 0.793555 0.955947 0.0280374 0.523785 0.97769 0.81922 0.952475 0.890354 2398 2400 chr6 116342691 116348145 chr6:116342691-116348145:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated DSE 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.916667 0.391608 0.914141 0.944444 0.905556 0.754902 0.0136054 0.865672 0.996032 0.950355 0.955823 0.962963 2399 2401 chr6 116638696 116644847 chr6:116638696-116644847:+:L1PA3:REF 12 + L1PA3 REF full-length ZUP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885091 0.905083 0.980184 0.980844 0.981802 0.862291 0.978693 0.934211 0.986873 0.932886 0.980046 0.981375 2400 2402 chr6 116816523 116818252 chr6:116816523-116818252:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated GPRC6A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.295826 0.867323 0.835484 0.859705 0.916244 0.777778 0.004329 0.938547 0.967257 0.857605 0.926728 0.900196 2401 2403 chr6 117040919 117044554 chr6:117040919-117044554:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.852713 0.0226876 0.476562 0.588697 0.464935 0.165563 0.0070922 0.243902 0.97619 0.482759 0.835329 0.9 2402 2404 chr6 117102131 117108163 chr6:117102131-117108163:+:L1HS:REF 11 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.417526 0.879082 0.727273 0.813187 0.822289 0.772334 0.0152672 0.762238 0.979915 0.862319 0.954733 2403 2405 chr6 117181817 117187827 chr6:117181817-117187827:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0532017 0.833496 0.658511 0.763436 0.88279 0.797571 0.0144391 0.86782 0.98196 0.803778 0.921409 0.938083 2404 2406 chr6 117244752 117250783 chr6:117244752-117250783:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0363636 0.615432 0.541053 0.586877 0.00827898 0.441593 0.0116681 0.261454 0.740699 0.617233 0.699841 0.619711 2405 2407 chr6 117721294 117727439 chr6:117721294-117727439:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.957201 0.890773 0.979798 0.974927 0.949421 0.945562 0.720376 0.98391 0.988308 0.912575 0.979626 0.968593 2406 2408 chr6 118338046 118343006 chr6:118338046-118343006:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated MRC5 0.0 2407 2409 chr6 118421031 118426804 chr6:118421031-118426804:+:L1P2:REF 11 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.944954 0.140741 0.817308 0.907407 0.732026 0.0338983 0.324675 0.510204 0.977273 0.232143 0.981818 2408 2410 chr6 118426816 118432950 chr6:118426816-118432950:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.849802 0.312871 0.801619 0.9141 0.468235 0.580882 0.0153846 0.727273 0.740214 0.810345 0.576433 0.96 2409 2411 chr6 118796300 118796914 chr6:118796300-118796914:+:L1PA4:REF 11 + L1PA4 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.657465 0.898358 0.951462 0.952825 0.854067 0.81981 0.774945 0.810136 0.885196 0.966667 0.96131 2410 2412 chr6 119417672 119424079 chr6:119417672-119424079:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.764706 0.136364 0.434783 0.642857 0.206897 0.0769231 0.0769231 0.875 1.0 0.5 0.0789474 0.9 2411 2413 chr6 120263391 120268890 chr6:120263391-120268890:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886076 0.860884 0.578554 0.666139 0.633333 0.536585 0.0319489 0.792982 0.968825 0.601626 0.726316 0.970588 2412 2414 chr6 120522337 120523948 chr6:120522337-120523948:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.850498 0.514437 0.726976 0.744382 0.609703 0.3074 0.0148601 0.885177 0.950348 0.726736 0.677674 0.942006 2413 2415 chr6 120637494 120643647 chr6:120637494-120643647:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.744949 0.593195 0.45645 0.6548 0.535659 0.229829 0.013245 0.618834 0.785283 0.706638 0.533736 0.837553 2414 2416 chr6 120688739 120694768 chr6:120688739-120694768:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.274953 0.641232 0.738614 0.793122 0.676329 0.488778 0.00577478 0.665851 0.927731 0.624804 0.829763 0.868039 2415 2417 chr6 120748350 120754492 chr6:120748350-120754492:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.708628 0.0698096 0.383901 0.443465 0.11153 0.0807601 0.00652529 0.343537 0.957233 0.364929 0.341633 0.640927 2416 2418 chr6 120817925 120819054 chr6:120817925-120819054:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.899274 0.604365 0.650199 0.718556 0.639472 0.523697 0.0121457 0.930825 0.985743 0.746201 0.787572 0.958982 2417 2419 chr6 121162716 121168725 chr6:121162716-121168725:+:L1HS:REF 12 + L1HS REF full-length TBC1D32 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.111374 0.824667 0.954623 0.974537 0.958969 0.933726 0.222404 0.979021 0.936082 0.925532 0.910714 0.976827 2418 2420 chr6 121702938 121709090 chr6:121702938-121709090:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.714286 0.019305 0.973494 0.991736 0.964684 0.993976 0.0133333 0.484568 0.705357 0.488889 0.586558 0.742268 2419 2421 chr6 121760198 121762666 chr6:121760198-121762666:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885714 0.263982 0.979487 0.970464 0.926641 0.945055 0.0142857 0.916667 0.987013 0.985714 0.964981 0.9 2420 2422 chr6 122537169 122543352 chr6:122537169-122543352:-:L1PA4:REF 12 - L1PA4 REF full-length PKIB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.900531 0.57449 0.655425 0.70674 0.751852 0.510288 0.389718 0.93871 0.955707 0.7 0.75641 0.919897 2421 2423 chr6 123472074 123478070 chr6:123472074-123478070:+:L1PA3:REF 12 + L1PA3 REF full-length TRDN 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.120226 0.689611 0.718111 0.76423 0.956475 0.632488 0.386224 0.931338 0.872256 0.789249 0.84703 0.913462 2422 2424 chr6 123532791 123532793 chr6:123532791-123532793:-:L1HS:NONREF 3 - L1HS KNR euL1db:mrip7049,1KGP:L1_umary_LINE1_1395,Philippe:EXP_ID_1218 TRDN K562,MCF7,HEK293 0.16129 0.978967 0.898662 Rodriguez-Martin_2020:5,Tubio_2014:4 2423 2425 chr6 124348613 124349000 chr6:124348613-124349000:+:L1PA4:REF 2 + L1PA4 REF 3prime-truncated NKAIN2 HepG2,MRC5 0.2 0.538462 2424 2426 chr6 124407195 124413266 chr6:124407195-124413266:-:L1PA4:REF 12 - L1PA4 REF full-length NKAIN2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911392 0.0684615 0.800971 0.820813 0.929915 0.434879 0.0200617 0.426207 0.785532 0.821549 0.976093 0.95284 2425 2427 chr6 124706843 124712830 chr6:124706843-124712830:-:L1PA2:REF 12 - L1PA2 REF full-length NKAIN2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.189394 0.808293 0.790511 0.891181 0.89388 0.649254 0.0213946 0.517711 0.849501 0.822547 0.946305 0.854027 2426 2428 chr6 124725696 124731722 chr6:124725696-124731722:+:L1PA2:REF 12 + L1PA2 REF full-length NKAIN2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.408964 0.561592 0.726052 0.828457 0.923783 0.359223 0.176196 0.68109 0.785861 0.740995 0.925 0.92094 2427 2429 chr6 124804502 124810643 chr6:124804502-124810643:+:L1PA3:REF 12 + L1PA3 REF full-length NKAIN2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.824726 0.561962 0.82238 0.940227 0.959227 0.753138 0.0739496 0.842788 0.935664 0.924157 0.952331 0.879079 2428 2430 chr6 125279944 125282063 chr6:125279944-125282063:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated HDDC2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.860849 0.981328 0.962217 0.932635 0.946117 0.968992 0.955056 0.982206 0.974425 0.983333 0.968603 0.970954 2429 2431 chr6 126165293 126167573 chr6:126165293-126167573:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated MRC5 0.0566038 2430 2432 chr6 126237812 126241342 chr6:126237812-126241342:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.920128 0.973585 0.673626 0.71411 0.840846 0.923077 0.510582 0.804554 0.967541 0.654008 0.854871 0.944321 2431 2433 chr6 126326598 126332742 chr6:126326598-126332742:+:L1PA3:REF 12 + L1PA3 REF full-length CENPW 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.864297 0.414242 0.756672 0.785259 0.908 0.79771 0.237724 0.906089 0.967818 0.821074 0.874145 0.935374 2432 2434 chr6 126673551 126679569 chr6:126673551-126679569:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.845007 0.0902703 0.869382 0.957661 0.580114 0.726496 0.0143541 0.819484 0.972536 0.904444 0.765847 0.965636 2433 2435 chr6 127043252 127049363 chr6:127043252-127049363:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.32567 2434 2436 chr6 127255062 127261128 chr6:127255062-127261128:+:L1PA6:REF 12 + L1PA6 REF full-length RNF146 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.710227 0.441358 0.75641 0.674897 0.805556 0.62037 0.015625 0.733333 0.828431 0.697479 0.746154 0.826087 2435 2437 chr6 127593292 127599292 chr6:127593292-127599292:+:L1PA2:REF 12 + L1PA2 REF full-length C6orf58 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.142415 0.688841 0.852575 0.9641 0.323707 0.858586 0.0160966 0.475258 0.985039 0.918103 0.954082 0.800643 2436 2438 chr6 127779940 127782766 chr6:127779940-127782766:-:L1P2:REF 12 - L1P2 REF 3prime-truncated THEMIS 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.870722 0.142232 0.630282 0.68617 0.666667 0.260417 0.0 0.937107 0.859813 0.611111 0.660714 0.870229 2437 2439 chr6 128774138 128780383 chr6:128774138-128780383:-:L1PA6:REF 10 - L1PA6 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.0588235 0.764706 0.861111 0.966667 0.333333 0.0 0.666667 1.0 0.916667 0.9 2438 2440 chr6 128829462 128835615 chr6:128829462-128835615:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908759 0.201258 0.887624 0.868282 0.764479 0.586006 0.0166052 0.475836 0.970793 0.845272 0.737955 0.956186 2439 2441 chr6 128905633 128911663 chr6:128905633-128911663:-:L1PA3:REF 12 - L1PA3 REF full-length LAMA2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.106828 0.792217 0.955484 0.866625 0.8 0.80083 0.0129641 0.727218 0.910335 0.960748 0.876173 0.857008 2440 2442 chr6 128998385 129000000 chr6:128998385-129000000:+:L1HS:REF 10 + L1HS REF 3prime-truncated LAMA2 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,H1 0.381242 0.796684 0.975192 0.96792 0.77439 0.0927988 0.891813 0.986556 0.949875 0.949183 2441 2443 chr6 129167160 129173198 chr6:129167160-129173198:-:L1PA2:REF 12 - L1PA2 REF full-length LAMA2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.262804 0.511147 0.872146 0.926905 0.930061 0.970561 0.0127353 0.867316 0.989224 0.905804 0.940743 0.646434 2442 2444 chr6 129568677 129575117 chr6:129568677-129575117:+:L1PA7:REF 12 + L1PA7 REF full-length ARHGAP18 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90566 0.875 0.969072 0.970874 0.847328 0.914634 0.380488 0.738095 0.939815 0.95 0.875 0.927083 2443 2445 chr6 130346085 130352219 chr6:130346085-130352219:+:L1PA4:REF 12 + L1PA4 REF full-length SAMD3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895592 0.465863 0.936404 0.815914 0.736842 0.217021 0.00819672 0.893293 0.974359 0.816667 0.887454 0.934615 2444 2446 chr6 130475515 130481667 chr6:130475515-130481667:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.924378 0.753075 0.982899 0.809733 0.85906 0.518405 0.00928074 0.919959 0.981595 0.905282 0.940334 0.973913 2445 2447 chr6 131234906 131241067 chr6:131234906-131241067:-:L1PA4:REF 12 - L1PA4 REF full-length AKAP7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.922287 0.947464 0.917647 0.957746 0.916667 0.767857 0.0277778 0.938596 0.961019 0.929293 0.948586 0.925764 2446 2448 chr6 132634829 132638492 chr6:132634829-132638492:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated TAAR1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.798969 0.484293 0.25 0.404878 0.507874 0.0 0.0 0.0434783 0.479339 0.325581 0.473485 0.807018 2447 2449 chr6 132986165 132986608 chr6:132986165-132986608:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.834746 0.0970874 0.3625 0.780488 0.833811 0.030303 0.00606061 0.689655 0.612676 0.809249 0.774112 0.965517 2448 2450 chr6 133020691 133026746 chr6:133020691-133026746:-:L1HS:REF 7 - L1HS REF full-length 2102Ep,HepG2,BJ,K562,MCF7,HCT116,H1 0.0985401 0.906977 0.823181 0.01576 0.934023 0.902676 0.963493 2449 2451 chr6 133155143 133155561 chr6:133155143-133155561:-:L1P3:REF 2 - L1P3 REF 3prime-truncated MRC5,HEK293 0.902174 0.921053 2450 2452 chr6 135765469 135771509 chr6:135765469-135771509:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.640088 0.735359 0.879563 0.915071 0.935369 0.832117 0.0437762 0.655396 0.520456 0.976144 0.886908 0.92439 2451 2453 chr6 139084431 139090562 chr6:139084431-139090562:-:L1PA6:REF 4 - L1PA6 REF full-length HepG2,MRC5,HEK293T,MCF7 0.0363636 0.722581 0.563636 0.78125 2452 2454 chr6 139210497 139216630 chr6:139210497-139216630:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.932952 0.658375 0.942041 0.956238 0.885801 0.912329 0.0237885 0.966535 0.978956 0.873977 0.900691 0.919129 2453 2455 chr6 140114725 140120893 chr6:140114725-140120893:+:L1PA6:REF 5 + L1PA6 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HCT116 0.825 0.025 0.959184 0.673077 0.979167 2454 2456 chr6 141566105 141572136 chr6:141566105-141572136:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.795363 0.881593 0.968504 0.980642 0.9635 0.92944 0.0114943 0.961702 0.976939 0.926829 0.945839 0.977444 2455 2457 chr6 141746025 141752036 chr6:141746025-141752036:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.447929 0.920766 0.892823 0.973525 0.801491 0.896907 0.331392 0.938083 0.976344 0.961916 0.887561 0.970905 2456 2458 chr6 141814814 141820842 chr6:141814814-141820842:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.252336 0.283415 0.846382 0.923447 0.514449 0.756531 0.218698 0.855942 0.945279 0.924453 0.729803 0.922091 2457 2459 chr6 141916863 141922880 chr6:141916863-141922880:+:L1PA2:REF 9 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293 0.76129 0.747222 0.789916 0.978805 0.725322 0.374302 0.904348 0.901554 0.755435 2458 2460 chr6 141969527 141975701 chr6:141969527-141975701:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.809595 0.734552 0.875733 0.972279 0.205809 0.187898 0.500952 0.771468 0.95709 0.945344 0.837361 0.956081 2459 2461 chr6 142128962 142128964 chr6:142128962-142128964:-:L1HS:NONREF 9 - L1HS KNR euL1db:mrip7103,1KGP:L1_umary_LINE1_1418,Philippe:EXP_ID_1226 NMBR 2102Ep,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.0780886 0.76698 0.905876 0.0125112 0.0113402 0.922222 0.981413 0.84788 0.541735 2460 2462 chr6 142577013 142583172 chr6:142577013-142583172:+:L1PA3:REF 11 + L1PA3 REF full-length LOC153910 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906057 0.705234 0.801278 0.895555 0.531056 0.00544588 0.866232 0.975049 0.870927 0.866628 0.946143 2461 2463 chr6 142979399 142983546 chr6:142979399-142983546:-:L1P2:REF 11 - L1P2 REF 3prime-truncated LINC01277 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.900794 0.0893142 0.508427 0.62442 0.461538 0.0384615 0.0127389 0.871795 0.647343 0.628429 0.930233 2462 2464 chr6 142993745 142997870 chr6:142993745-142997870:+:L1P2:REF 12 + L1P2 REF 3prime-truncated LINC01277 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896921 0.701493 0.902133 0.919966 0.92724 0.57377 0.0601399 0.923077 0.981432 0.908815 0.951685 0.9475 2463 2465 chr6 143302225 143308357 chr6:143302225-143308357:-:L1PA3:REF 12 - L1PA3 REF full-length AIG1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.939137 0.845657 0.872975 0.944935 0.938568 0.847273 0.614634 0.758209 0.884108 0.870307 0.958217 0.867863 2464 2466 chr6 144041197 144047335 chr6:144041197-144047335:-:L1PA6:REF 12 - L1PA6 REF full-length PLAGL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918699 0.228571 0.619565 0.662531 0.614213 0.0961538 0.0555556 0.932432 0.851852 0.576271 0.758865 0.920635 2465 2467 chr6 145663247 145663496 chr6:145663247-145663496:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated EPM2A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.958245 0.94893 0.963299 0.969826 0.745863 0.742831 0.0125448 0.961667 0.985011 0.968724 0.945847 0.971751 2466 2468 chr6 145673301 145679421 chr6:145673301-145679421:+:L1PA6:REF 12 + L1PA6 REF full-length EPM2A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.843575 0.95977 0.951049 0.962704 0.914384 0.933333 0.0169492 0.97619 0.971429 0.988636 0.955947 0.988889 2467 2469 chr6 147842450 147842453 chr6:147842450-147842453:+:L1HS:NONREF 3 + L1HS KNR euL1db:mrip7109,1KGP:L1_umary_LINE1_1424,Philippe:EXP_ID_1228 K562,HCT116,HEK293 0.867896 0.976056 0.958621 2468 2470 chr6 148858497 148864630 chr6:148858497-148864630:-:L1PA5:REF 12 - L1PA5 REF full-length UST 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.718935 0.829893 0.972692 0.929825 0.954274 0.663492 0.01649 0.964218 0.988439 0.936667 0.968153 0.931818 2469 2471 chr6 152028158 152034290 chr6:152028158-152034290:+:L1PA5:REF 12 + L1PA5 REF full-length ESR1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.915033 0.725532 0.713235 0.739663 0.394444 0.72093 0.0196078 0.977528 0.846645 0.838983 0.892157 0.811966 2470 2472 chr6 152078502 152083797 chr6:152078502-152083797:+:L1PA6:REF 5 + L1PA6 REF 3prime-truncated ESR1 HepG2,BJ,MRC5,HEK293T,HCT116 0.0909091 0.568182 0.582734 0.4125 0.793651 2471 2473 chr6 152608998 152615129 chr6:152608998-152615129:+:L1PA6:REF 12 + L1PA6 REF full-length SYNE1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.861111 0.208955 0.933014 0.894811 0.60076 0.906977 0.0306122 0.172414 0.92068 0.961722 0.884536 0.904762 2472 2474 chr6 152712429 152712656 chr6:152712429-152712656:-:L1HS:REF 6 - L1HS REF 3prime-truncated MYCT1 2102Ep,HepG2,BJ,MRC5,MCF7,IMR90 0.939868 0.571897 0.857666 0.94191 0.932262 0.96211 2473 2475 chr6 156034135 156040165 chr6:156034135-156040165:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872359 0.763097 0.758328 0.856829 0.7654 0.428 0.026878 0.745742 0.738095 0.818523 0.686334 0.950301 2474 2476 chr6 156324980 156331010 chr6:156324980-156331010:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.275135 0.802164 0.87132 0.837878 0.920014 0.715686 0.0067598 0.932339 0.919311 0.853553 0.916399 0.962791 2475 2477 chr6 156361254 156367276 chr6:156361254-156367276:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.855964 0.760161 0.788533 0.822836 0.911512 0.62753 0.00669269 0.806492 0.837337 0.805296 0.783213 0.920078 2476 2478 chr6 157547703 157547705 chr6:157547703-157547705:-:L1HS:NONREF 10 - L1HS KNR euL1db:mrip7144,1KGP:L1_umary_LINE1_1437,Philippe:EXP_ID_1233 ZDHHC14 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.171117 0.97546 0.95589 0.928638 0.955224 0.95616 0.963354 0.98209 0.938798 0.899682 Rodriguez-Martin_2020:5 2477 2479 chr6 158178477 158184036 chr6:158178477-158184036:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated GTF2H5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.92803 0.660131 0.965699 0.979321 0.8434 0.975 0.830239 0.852564 0.972376 0.985714 0.934272 0.963964 2478 2480 chr6 159670614 159676755 chr6:159670614-159676755:+:L1PA5:REF 12 + L1PA5 REF full-length SOD2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.827789 0.966905 0.9729 0.801832 0.927313 0.976331 0.931224 0.970684 0.970547 0.962209 0.936019 0.974074 2479 2481 chr6 160564531 160570646 chr6:160564531-160570646:+:L1PA5:REF 10 + L1PA5 REF full-length LPA 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,IMR90,HEK293,H1 0.844633 0.281501 0.385542 0.449704 0.0606061 0.0212418 0.0646388 0.486726 0.573034 0.80805 2480 2482 chr6 160570644 160572338 chr6:160570644-160572338:-:L1PA7:REF 3 - L1PA7 REF 3prime-truncated LPA BJ,MRC5,HEK293 0.818182 0.791667 0.694444 2481 2483 chr6 160679719 160685751 chr6:160679719-160685751:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.136364 0.911703 0.75873 0.784687 0.654453 0.34315 0.15272 0.0424671 0.885596 0.772006 0.894994 0.916084 2482 2484 chr6 162838592 162844620 chr6:162838592-162844620:-:L1PA2:REF 12 - L1PA2 REF full-length PACRG 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.848924 0.890456 0.906153 0.893128 0.9657 0.799355 0.0165103 0.922947 0.972105 0.842942 0.968301 0.980908 2483 2485 chr6 162989737 162995762 chr6:162989737-162995762:-:L1PA2:REF 12 - L1PA2 REF full-length PACRG 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.679792 0.871948 0.905882 0.921061 0.930649 0.474548 0.00625782 0.926174 0.976232 0.852184 0.935011 0.961181 2484 2486 chr6 164702727 164708899 chr6:164702727-164708899:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.817255 0.170933 0.529278 0.626427 0.03026 0.202918 0.0121457 0.029106 0.310368 0.483232 0.619532 0.894327 2485 2487 chr6 164781960 164787983 chr6:164781960-164787983:-:L1PA2:REF 12 - L1PA2 REF full-length MEAT6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.462298 0.54009 0.580775 0.656911 0.248881 0.209418 0.0190616 0.0244499 0.703544 0.668122 0.811129 0.906122 2486 2488 chr6 166788874 166795015 chr6:166788874-166795015:+:L1PA4:REF 12 + L1PA4 REF full-length RPS6KA2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923368 0.875849 0.830275 0.891528 0.789916 0.52506 0.441126 0.0229008 0.941893 0.894137 0.916043 0.974359 2487 2489 chr6 166884811 166890997 chr6:166884811-166890997:+:L1PA5:REF 11 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.885057 0.957529 0.805882 0.759152 0.886598 0.813559 0.48 0.933333 0.78 0.924901 0.916667 2488 2490 chr7 2743552 2749674 chr7:2743552-2749674:+:L1PA4:REF 12 + L1PA4 REF full-length AMZ1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.855865 0.933782 0.939552 0.930766 0.921097 0.976285 0.88701 0.898983 0.984817 0.955426 0.987411 0.936047 2489 2491 chr7 3121545 3127690 chr7:3121545-3127690:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.821519 0.81981 0.761905 0.781163 0.760143 0.767857 0.0275527 0.888372 0.873457 0.846608 0.888276 0.87037 2490 2492 chr7 7465092 7471120 chr7:7465092-7471120:+:L1HS:REF 12 + L1HS REF full-length COL28A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0476712 0.914183 0.95746 0.966549 0.9008 0.932917 0.328293 0.960521 0.916832 0.924377 0.9375 0.95853 2491 2493 chr7 7656316 7662777 chr7:7656316-7662777:-:L1PA7:REF 1 - L1PA7 REF full-length RPA3 MRC5 0.744875 2492 2494 chr7 7979395 7979397 chr7:7979395-7979397:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip7194,1KGP:L1_umary_LINE1_1448,Philippe:EXP_ID_1238 GLCCI1 HEK293 0.838811 2493 2495 chr7 8239428 8245573 chr7:8239428-8245573:+:L1PA6:REF 7 + L1PA6 REF full-length ICA1 HepG2,BJ,MRC5,HeLaS3,K562,MCF7,IMR90 0.373333 0.576923 0.669474 0.674242 0.861538 0.702381 0.561224 2494 2496 chr7 8298113 8304140 chr7:8298113-8304140:-:L1PA3:REF 12 - L1PA3 REF full-length LOC100505938 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0405316 0.902809 0.81854 0.772286 0.00573301 0.854223 0.00572246 0.76329 0.00216763 0.778584 0.974552 0.907298 2495 2497 chr7 8351723 8353975 chr7:8351723-8353975:+:L1HS:REF 12 + L1HS REF 3prime-truncated LOC100505938 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0360268 0.846468 0.773823 0.791189 0.952151 0.772352 0.316069 0.0157255 0.981998 0.752778 0.861171 0.944093 2496 2498 chr7 8726340 8732368 chr7:8726340-8732368:-:L1PA3:REF 12 - L1PA3 REF full-length NXPH1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.899897 0.696009 0.737742 0.779955 0.678741 0.858009 0.818257 0.824293 0.985075 0.823529 0.777962 0.934694 2497 2499 chr7 8847084 8847086 chr7:8847084-8847086:+:L1HS:NONREF 5 + L1HS KNR euL1db:mrip7199,Philippe:EXP_ID_1240 BJ,MRC5,HEK293T,IMR90,HEK293 0.783231 0.846815 0.582702 0.849711 0.804586 Beck_2010:86.0 2498 2500 chr7 9163396 9169854 chr7:9163396-9169854:-:L1PA7:REF 1 - L1PA7 REF full-length MRC5 0.0 2499 2501 chr7 9398757 9404781 chr7:9398757-9404781:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.817337 0.761421 0.841649 0.872495 0.714286 0.771429 0.0338028 0.805492 0.989399 0.917355 0.886248 0.942568 2500 2502 chr7 9436392 9442524 chr7:9436392-9442524:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856916 0.275762 0.502762 0.592449 0.30303 0.291457 0.0219512 0.203077 0.962963 0.603774 0.310417 0.852174 2501 2503 chr7 10363830 10368188 chr7:10363830-10368188:-:L1P3:REF 5 - L1P3 REF 3prime-truncated 2102Ep,HepG2,MRC5,HCT116,HEK293 0.962963 0.0 0.214286 0.956522 0.411765 2502 2504 chr7 10372560 10378699 chr7:10372560-10378699:+:L1PA6:REF 3 + L1PA6 REF full-length HepG2,MRC5,HEK293T 0.0784314 0.260417 0.0181818 2503 2505 chr7 10625076 10626565 chr7:10625076-10626565:+:L1PA7:REF 6 + L1PA7 REF 3prime-truncated MGC4859 HepG2,BJ,MRC5,HEK293T,HeLaS3,HEK293 0.05 0.302632 0.40404 0.545455 0.0533333 0.457447 2504 2506 chr7 10695593 10702015 chr7:10695593-10702015:+:L1PA7:REF 12 + L1PA7 REF full-length MGC4859 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.850356 0.335294 0.510417 0.621318 0.222826 0.0664336 0.563863 0.671569 0.969136 0.643979 0.333333 0.710692 2505 2507 chr7 10747087 10753227 chr7:10747087-10753227:+:L1PA5:REF 1 + L1PA5 REF full-length MGC4859 MRC5 0.196382 2506 2508 chr7 11389460 11392052 chr7:11389460-11392052:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated THSD7A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.80618 0.0802469 0.287671 0.562319 0.825 0.12 0.00843882 0.645833 0.936396 0.270833 0.435606 0.965278 2507 2509 chr7 11674973 11681399 chr7:11674973-11681399:+:L1PA7:REF 12 + L1PA7 REF full-length THSD7A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.88172 0.40625 0.524194 0.658052 0.823151 0.53 0.00574713 0.09375 0.955823 0.555556 0.697872 0.942857 2508 2510 chr7 12497211 12500000 chr7:12497211-12500000:+:L1HS:REF 12 + L1HS REF 3prime-truncated LOC102725191 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.031677 0.0131723 0.838636 0.868183 0.00795925 0.00660793 0.00662837 0.0673611 0.601611 0.871463 0.783421 0.88131 2509 2511 chr7 13002207 13003429 chr7:13002207-13003429:-:L1P2:REF 1 - L1P2 REF 3prime-truncated MRC5 0.0 2510 2512 chr7 13268694 13274829 chr7:13268694-13274829:-:L1PA4:REF 8 - L1PA4 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293 0.858696 0.73913 0.921986 0.730769 0.548387 0.971429 0.814286 0.822785 2511 2513 chr7 13765644 13767081 chr7:13765644-13767081:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.673903 0.868226 0.95782 0.96784 0.959259 0.646115 0.0372005 0.798049 0.915148 0.970207 0.90448 0.972431 2512 2514 chr7 13806269 13812292 chr7:13806269-13812292:+:L1PA2:REF 5 + L1PA2 REF full-length HepG2,MRC5,HEK293T,HCT116,IMR90 0.712418 0.927114 0.842105 0.794304 0.859375 2513 2515 chr7 14278870 14285021 chr7:14278870-14285021:+:L1PA3:REF 12 + L1PA3 REF full-length DGKB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.145245 0.559404 0.606162 0.881692 0.944361 0.444379 0.0106714 0.501589 0.873866 0.840836 0.928048 0.592249 2514 2516 chr7 14313260 14319290 chr7:14313260-14319290:+:L1PA3:REF 12 + L1PA3 REF full-length DGKB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0520103 0.719739 0.826494 0.920288 0.879189 0.576479 0.0146374 0.367012 0.981132 0.900215 0.928182 0.782609 2515 2517 chr7 14647630 14653668 chr7:14647630-14653668:+:L1PA2:REF 12 + L1PA2 REF full-length DGKB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.245344 0.652991 0.876491 0.95935 0.941134 0.715054 0.0356347 0.797954 0.988687 0.893642 0.889434 0.964899 2516 2518 chr7 15517372 15523845 chr7:15517372-15523845:+:L1PA7:REF 4 + L1PA7 REF full-length AGMO 2102Ep,MRC5,HEK293T,HEK293 0.873239 0.975758 0.980769 0.895522 2517 2519 chr7 15547309 15553333 chr7:15547309-15553333:+:L1PA2:REF 12 + L1PA2 REF full-length AGMO 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0842473 0.920019 0.914255 0.97597 0.897137 0.625 0.017316 0.804167 0.982854 0.937576 0.949904 0.514754 2518 2520 chr7 15940231 15946255 chr7:15940231-15946255:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.102857 0.795588 0.959507 0.967608 0.923653 0.730097 0.0114286 0.715302 0.983793 0.975385 0.966942 0.977099 2519 2521 chr7 16216428 16222457 chr7:16216428-16222457:+:L1PA2:REF 12 + L1PA2 REF full-length CRPPA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.110882 0.835391 0.885903 0.906398 0.823376 0.650303 0.919705 0.897549 0.976492 0.958296 0.903361 0.890284 2520 2522 chr7 16248596 16252056 chr7:16248596-16252056:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated CRPPA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911972 0.7 0.80036 0.942935 0.864769 0.238329 0.928571 0.959288 0.983456 0.923077 0.947712 0.92926 2521 2523 chr7 16378112 16384140 chr7:16378112-16384140:-:L1PA3:REF 3 - L1PA3 REF full-length CRPPA 2102Ep,HepG2,MRC5 0.866667 0.746154 0.95539 2522 2524 chr7 17215217 17221355 chr7:17215217-17221355:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878049 0.83899 0.876011 0.882048 0.769014 0.82786 0.264172 0.299287 0.845401 0.960417 0.830964 0.841521 2523 2525 chr7 17734717 17740820 chr7:17734717-17740820:+:L1PA5:REF 2 + L1PA5 REF full-length MCF7,IMR90 0.0 0.0 2524 2526 chr7 17806656 17813125 chr7:17806656-17813125:+:L1PA7:REF 3 + L1PA7 REF full-length SNX13 2102Ep,MRC5,HEK293T 0.844444 0.580131 0.988889 2525 2527 chr7 18985072 18991069 chr7:18985072-18991069:-:L1PA3:REF 12 - L1PA3 REF full-length HDAC9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863118 0.705628 0.990164 0.981842 0.95107 0.718978 0.027972 0.664122 0.977612 0.990654 0.90303 0.946565 2526 2528 chr7 19034234 19040386 chr7:19034234-19040386:-:L1PA6:REF 1 - L1PA6 REF full-length MRC5 0.00833333 2527 2529 chr7 19189041 19195047 chr7:19189041-19195047:-:L1PA2:REF 3 - L1PA2 REF full-length 2102Ep,MRC5,HEK293T 0.314286 0.675258 0.907895 2528 2530 chr7 19877681 19883794 chr7:19877681-19883794:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.844037 0.408163 0.760417 0.832381 0.666667 0.849462 0.0740741 0.904762 0.896226 0.710526 0.818182 0.968992 2529 2531 chr7 19883968 19890109 chr7:19883968-19890109:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.88 0.244898 0.792793 0.840964 0.540564 0.712411 0.0112936 0.911859 0.987391 0.78373 0.710583 0.951613 2530 2532 chr7 20067809 20073950 chr7:20067809-20073950:+:L1PA3:REF 12 + L1PA3 REF full-length LOC101927668 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.957589 0.844411 0.964286 0.963971 0.922137 0.929204 0.0487805 0.954248 0.986381 0.938776 0.964 0.976562 2531 2533 chr7 21146237 21148368 chr7:21146237-21148368:+:L1P3:REF 1 + L1P3 REF 3prime-truncated MRC5 0.464 2532 2534 chr7 22528296 22534331 chr7:22528296-22534331:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.622281 0.859485 0.901709 0.952622 0.938518 0.857585 0.868217 0.954774 0.975967 0.908795 0.963592 0.919048 2533 2535 chr7 23035734 23039855 chr7:23035734-23039855:+:L1PA2:REF 11 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.215166 0.92878 0.903906 0.939206 0.725166 0.453106 0.787798 0.970701 0.899215 0.96266 0.897399 2534 2536 chr7 23321058 23327074 chr7:23321058-23327074:+:L1PA3:REF 12 + L1PA3 REF full-length IGF2BP3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.933237 0.924966 0.830721 0.982669 0.980301 0.870759 0.837901 0.478694 0.966051 0.985699 0.98304 0.985481 2535 2537 chr7 23773778 23780292 chr7:23773778-23780292:-:L1PA6:REF 7 - L1PA6 REF full-length STK31 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,HCT116,HEK293 0.904762 0.369231 0.850515 0.853659 0.666667 1.0 0.833333 2536 2538 chr7 23822602 23828742 chr7:23822602-23828742:-:L1PA4:REF 12 - L1PA4 REF full-length STK31 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.75836 0.635262 0.705409 0.703417 0.737548 0.765613 0.617619 0.599296 0.829322 0.788224 0.788913 0.864701 2537 2539 chr7 23844558 23847393 chr7:23844558-23847393:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895678 0.128205 0.482394 0.646761 0.690068 0.875458 0.0517241 0.134228 0.937799 0.598456 0.815942 0.939914 2538 2540 chr7 23947171 23953317 chr7:23947171-23953317:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.907895 0.685 0.77551 0.772727 0.610526 0.976744 0.0921986 0.477064 0.964467 0.702128 0.641026 0.967742 2539 2541 chr7 24116922 24118569 chr7:24116922-24118569:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.93578 0.557522 0.484412 0.917836 0.793532 0.951299 0.00630915 0.13986 0.937238 0.567114 0.82134 0.864078 2540 2542 chr7 25000000 25002413 chr7:25000000-25002413:-:L1P2:REF 2 - L1P2 REF 3prime-truncated 2102Ep,MRC5 0.305556 0.321429 2541 2543 chr7 25041860 25047891 chr7:25041860-25047891:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0401189 0.922993 0.926282 0.978388 0.488221 0.920727 0.268525 0.963526 0.976074 0.96395 0.966463 0.858586 2542 2544 chr7 25603033 25609049 chr7:25603033-25609049:+:L1PA2:REF 12 + L1PA2 REF full-length LOC646588 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.097094 0.0234995 0.401144 0.236683 0.0111879 0.786951 0.154524 0.0330275 0.932218 0.494697 0.0426853 0.0696266 2543 2545 chr7 25743832 25749863 chr7:25743832-25749863:+:L1PA2:REF 9 + L1PA2 REF full-length LOC646588 2102Ep,HepG2,BJ,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.0804196 0.877076 0.888112 0.759615 0.149826 0.950764 0.864734 0.898936 0.905405 2544 2546 chr7 26764849 26770911 chr7:26764849-26770911:-:L1P3:REF 1 - L1P3 REF full-length SKAP2 MRC5 0.00485437 2545 2547 chr7 27002445 27008595 chr7:27002445-27008595:-:L1PA5:REF 11 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889831 0.654891 0.626712 0.663599 0.867277 0.0119522 0.947531 0.976115 0.723077 0.875519 0.881517 2546 2548 chr7 27502208 27508199 chr7:27502208-27508199:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.798643 0.923664 0.97006 0.94049 0.921114 0.924731 0.486188 0.882576 0.975248 0.895425 0.945017 0.892857 2547 2549 chr7 29579936 29585963 chr7:29579936-29585963:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.489667 0.86289 0.815318 0.809561 0.803681 0.858425 0.253689 0.966881 0.91192 0.795844 0.837099 0.922204 2548 2550 chr7 30414475 30420503 chr7:30414475-30420503:-:L1PA2:REF 12 - L1PA2 REF full-length NOD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.396362 0.9647 0.957937 0.96341 0.979158 0.974466 0.69938 0.196587 0.982018 0.950838 0.97992 0.858566 2549 2551 chr7 30439242 30445274 chr7:30439242-30445274:+:L1HS:REF 12 + L1HS REF full-length NOD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.152679 0.951356 0.948487 0.941355 0.968161 0.962712 0.902913 0.961656 0.954307 0.924394 0.985472 0.824561 Brouha_2003:3.0 Rodriguez-Martin_2020:36,Tubio_2014:1 2550 2552 chr7 30537513 30543634 chr7:30537513-30543634:+:L1PA5:REF 12 + L1PA5 REF full-length GARS-DT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.817073 0.789474 0.862069 0.921986 0.706468 0.87037 0.440678 0.909091 0.902913 0.880952 0.883041 0.906977 2551 2553 chr7 30636808 30642830 chr7:30636808-30642830:-:L1PA2:REF 12 - L1PA2 REF full-length GARS 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0780876 0.986616 0.916612 0.632856 0.973142 0.980931 0.97054 0.962567 0.981153 0.87355 0.973251 0.434174 2552 2554 chr7 31501202 31507228 chr7:31501202-31507228:-:L1PA3:REF 11 - L1PA3 REF full-length ITPRID1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.927083 0.449198 0.661654 0.660674 0.386243 0.311258 0.0124224 0.905983 0.647059 0.717172 0.735294 2553 2555 chr7 31619616 31625782 chr7:31619616-31625782:+:L1PA3:REF 11 + L1PA3 REF full-length ITPRID1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.686047 0.474104 0.645985 0.661257 0.508812 0.158192 0.00567108 0.490358 0.611111 0.870932 0.907162 2554 2556 chr7 32081883 32088040 chr7:32081883-32088040:+:L1PA3:REF 12 + L1PA3 REF full-length PDE1C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.745553 0.523408 0.693702 0.674947 0.504356 0.357656 0.00943396 0.652745 0.724176 0.747941 0.814365 0.88 2555 2557 chr7 32307744 32313917 chr7:32307744-32313917:+:L1PA4:REF 12 + L1PA4 REF full-length PDE1C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87482 0.681582 0.781967 0.784615 0.449409 0.64728 0.0109356 0.905263 0.860215 0.861333 0.790221 0.863436 2556 2558 chr7 32464528 32470565 chr7:32464528-32470565:+:L1PA3:REF 12 + L1PA3 REF full-length LOC100130673 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.10626 0.886572 0.785987 0.857533 0.769081 0.456597 0.0133053 0.830075 0.534994 0.879679 0.966782 0.806452 2557 2559 chr7 32682678 32688715 chr7:32682678-32688715:-:L1PA2:REF 12 - L1PA2 REF full-length DPY19L1P1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.618501 0.980947 0.972973 0.984127 0.97118 0.962203 0.978302 0.987705 0.975969 0.963061 0.982111 0.963768 2558 2560 chr7 32697653 32703545 chr7:32697653-32703545:-:L1PA2:REF 12 - L1PA2 REF full-length DPY19L1P1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.323871 0.894535 0.921799 0.907249 0.85272 0.941876 0.920424 0.891198 0.913793 0.874332 0.879913 0.936869 2559 2561 chr7 32708015 32714180 chr7:32708015-32714180:+:L1PA3:REF 12 + L1PA3 REF full-length DPY19L1P1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.794938 0.984127 0.944323 0.978545 0.944444 0.982533 0.92068 0.985733 0.98622 0.987976 0.964049 0.872017 2560 2562 chr7 33162386 33167012 chr7:33162386-33167012:-:L1PA6:REF 10 - L1PA6 REF 3prime-truncated BBS9 2102Ep,HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.978873 1.0 0.851852 0.913978 0.817204 0.0333333 0.8625 0.916667 0.8125 0.928571 2561 2563 chr7 33406378 33408588 chr7:33406378-33408588:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated BBS9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921497 0.763636 0.921429 0.934426 0.898084 0.799127 0.00196271 0.844017 0.970534 0.913257 0.923157 0.983019 2562 2564 chr7 33521747 33527773 chr7:33521747-33527773:-:L1PA2:REF 12 - L1PA2 REF full-length BBS9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0954664 0.844079 0.957753 0.950783 0.0302234 0.920404 0.022694 0.946204 0.980806 0.955224 0.30117 0.587108 2563 2565 chr7 33988616 33994636 chr7:33988616-33994636:-:L1PA2:REF 12 - L1PA2 REF full-length BMPER 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.263761 0.844186 0.937867 0.978468 0.935531 0.957882 0.02331 0.971334 0.971296 0.972426 0.958947 0.93733 2564 2566 chr7 34169569 34175587 chr7:34169569-34175587:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.29414 0.948348 0.952135 0.953506 0.0105843 0.0083709 0.0366911 0.016285 0.485437 0.968778 0.896429 0.820588 2565 2567 chr7 34200242 34206277 chr7:34200242-34206277:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.24 0.879121 0.905317 0.910235 0.888412 0.820183 0.105088 0.945591 0.978074 0.915408 0.910788 0.670968 2566 2568 chr7 34431327 34437453 chr7:34431327-34437453:+:L1PA6:REF 9 + L1PA6 REF full-length NPSR1-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293 0.925 0.990826 0.882353 0.663842 0.670886 0.56383 0.0135135 0.707692 0.701754 2567 2569 chr7 34513494 34515633 chr7:34513494-34515633:+:L1PA2:REF 11 + L1PA2 REF 3prime-truncated NPSR1-AS1 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.829208 0.988613 0.722962 0.671868 0.556682 0.0218254 0.891667 0.971689 0.710648 0.7925 0.917031 2568 2570 chr7 34906239 34912252 chr7:34906239-34912252:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.125137 0.394202 0.539556 0.374885 0.670606 0.796821 0.177763 0.592461 0.971227 0.378655 0.193411 0.524671 2569 2571 chr7 35092957 35098972 chr7:35092957-35098972:+:L1PA2:REF 12 + L1PA2 REF full-length DPY19L2P1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.228033 0.851316 0.82971 0.808724 0.944444 0.800618 0.0631845 0.967866 0.980628 0.84505 0.963841 0.858232 2570 2572 chr7 36119955 36126150 chr7:36119955-36126150:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.18806 2571 2573 chr7 36375312 36379233 chr7:36375312-36379233:-:L1P2:REF 12 - L1P2 REF 3prime-truncated KIAA0895 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.803493 0.553648 0.602837 0.210256 0.620536 0.72 0.0571429 0.541667 0.919192 0.32 0.722222 0.7375 2572 2574 chr7 36552965 36559126 chr7:36552965-36559126:-:L1PA3:REF 12 - L1PA3 REF full-length AOAH 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891841 0.539427 0.760218 0.884187 0.856061 0.408805 0.0176768 0.197368 0.884131 0.753731 0.946429 0.935897 2573 2575 chr7 37120163 37126300 chr7:37120163-37126300:+:L1PA5:REF 12 + L1PA5 REF full-length ELMO1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.913118 0.818898 0.870229 0.948812 0.844948 0.47962 0.0982906 0.633065 0.948864 0.826923 0.895661 0.963115 2574 2576 chr7 37163342 37169491 chr7:37163342-37169491:-:L1PA3:REF 12 - L1PA3 REF full-length ELMO1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909705 0.890909 0.840176 0.890609 0.842344 0.446755 0.340251 0.612335 0.949114 0.810458 0.896196 0.922877 2575 2577 chr7 37612053 37618072 chr7:37612053-37618072:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.028799 0.722253 0.766978 0.742996 0.919372 0.88638 0.169014 0.85048 0.844679 0.827907 0.924107 0.775689 2576 2578 chr7 39007527 39013552 chr7:39007527-39013552:-:L1PA2:REF 12 - L1PA2 REF full-length POU6F2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0419188 0.922421 0.881172 0.834586 0.824948 0.811802 0.0197452 0.896875 0.937422 0.858187 0.971594 0.780702 2577 2579 chr7 40333760 40339892 chr7:40333760-40339892:-:L1PA5:REF 12 - L1PA5 REF full-length SUGCT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90856 0.94708 0.852349 0.852598 0.763587 0.529412 0.223827 0.639241 0.919689 0.766917 0.807531 0.943396 2578 2580 chr7 40948476 40954590 chr7:40948476-40954590:-:L1PA7:REF 5 - L1PA7 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HCT116 0.880734 0.4 0.948529 0.6875 0.852459 2579 2581 chr7 41552203 41553284 chr7:41552203-41553284:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated MRC5 0.00925926 2580 2582 chr7 42580573 42586752 chr7:42580573-42586752:-:L1PA4:REF 9 - L1PA4 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.870407 0.166311 0.721149 0.850239 0.814545 0.930472 0.434021 0.768053 0.945049 2581 2583 chr7 43059096 43065116 chr7:43059096-43065116:+:L1PA2:REF 9 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.147651 0.84 0.828947 0.910078 0.182222 0.679537 0.8125 0.952077 0.850575 2582 2584 chr7 43414979 43417052 chr7:43414979-43417052:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated HECW1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.704545 0.900444 0.938776 0.949068 0.956609 0.895944 0.254351 0.877232 0.966543 0.893372 0.949202 0.929577 2583 2585 chr7 43773137 43779287 chr7:43773137-43779287:-:L1PA4:REF 11 - L1PA4 REF full-length BLVRA 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.931298 0.769144 0.971392 0.972469 0.428812 0.203496 0.666667 0.900444 0.978431 0.9573 0.948509 2584 2586 chr7 45377515 45383528 chr7:45377515-45383528:-:L1PA3:REF 5 - L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HCT116 0.900763 0.642857 0.683849 0.722772 0.87037 2585 2587 chr7 45947419 45953420 chr7:45947419-45953420:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.904379 0.879167 0.94948 0.928438 0.747551 0.946237 0.0204327 0.966972 0.973451 0.942786 0.903826 0.974118 2586 2588 chr7 46590735 46596528 chr7:46590735-46596528:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.903226 0.292683 0.962617 0.93808 0.402439 0.614865 0.0 0.789474 0.9 0.967949 0.90583 0.929825 2587 2589 chr7 48601227 48607497 chr7:48601227-48607497:-:L1PA7:REF 12 - L1PA7 REF full-length ABCA13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.860748 0.226148 0.470035 0.47708 0.357831 0.296471 0.0542495 0.592105 0.550859 0.650704 0.656292 0.901786 2588 2590 chr7 49649738 49655883 chr7:49649738-49655883:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.816 0.189542 0.351852 0.354667 0.260684 0.158273 0.010582 0.223214 0.401042 0.347826 0.382353 0.741379 2589 2591 chr7 49680245 49686300 chr7:49680245-49686300:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.13587 0.85034 0.908932 0.850318 0.798408 0.718563 0.180593 0.851572 0.928508 0.83121 0.944156 0.926247 Rodriguez-Martin_2020:8 2590 2592 chr7 50898842 50904874 chr7:50898842-50904874:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0572254 0.877376 0.867159 0.871585 0.644165 0.721805 0.0198276 0.922811 0.971429 0.903904 0.947055 0.910644 2591 2593 chr7 51533170 51537238 chr7:51533170-51537238:-:L1PA7:REF 7 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,HCT116,IMR90 0.928571 0.0384615 0.361111 0.115385 0.115385 0.25 0.35 2592 2594 chr7 51594010 51600147 chr7:51594010-51600147:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.881159 0.141361 0.67467 0.634521 0.304009 0.205414 0.00646204 0.515856 0.660694 0.67234 0.82069 0.945055 2593 2595 chr7 51833472 51839489 chr7:51833472-51839489:-:L1PA3:REF 8 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,HEK293 0.467433 0.45283 0.601695 0.650096 0.381526 0.204651 0.754839 0.62 2594 2596 chr7 51889909 51895941 chr7:51889909-51895941:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.316846 0.737386 0.645764 0.721795 0.431058 0.327014 0.0118694 0.852151 0.679868 0.646959 0.679437 0.897304 2595 2597 chr7 53026321 53032336 chr7:53026321-53032336:-:L1PA2:REF 10 - L1PA2 REF full-length POM121L12 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,H1 0.163566 0.670303 0.729532 0.783544 0.554909 0.616867 0.578431 0.797721 0.803204 0.943489 2596 2598 chr7 53584807 53584809 chr7:53584807-53584809:-:L1HS:NONREF 3 - L1HS KNR euL1db:mrip7345,1KGP:L1_umary_LINE1_1510,Philippe:EXP_ID_1266 2102Ep,BJ,MCF7 0.362069 0.851701 0.952113 Beck_2010:118.0 Rodriguez-Martin_2020:19,Tubio_2014:4 2597 2599 chr7 54041299 54047468 chr7:54041299-54047468:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.877005 0.114204 0.526174 0.459718 0.0210909 0.0396175 0.00450958 0.258065 0.391304 0.496423 0.236945 0.92236 2598 2600 chr7 54319615 54324273 chr7:54319615-54324273:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated LINC01445 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.842233 0.0165837 0.529528 0.31872 0.0496454 0.017192 0.00321543 0.538793 0.0641975 0.451923 0.348235 0.880952 2599 2601 chr7 54500000 54504884 chr7:54500000-54504884:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.916832 0.484929 0.649009 0.477515 0.158572 0.647982 0.00413467 0.955224 0.710137 0.531802 0.470048 0.817662 2600 2602 chr7 54853310 54856482 chr7:54853310-54856482:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.849673 0.0350877 0.904 0.41853 0.754839 0.942029 0.0 0.977778 0.991525 0.916667 0.80303 0.960526 2601 2603 chr7 56506419 56512558 chr7:56506419-56512558:-:L1PA4:REF 12 - L1PA4 REF full-length DKFZp434L192 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.641509 0.00757576 0.502092 0.507042 0.019544 0.226562 0.00925926 0.443548 0.167364 0.49 0.228814 0.672269 2602 2604 chr7 56584796 56590824 chr7:56584796-56590824:+:L1PA2:REF 10 + L1PA2 REF full-length 2102Ep,HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.620915 0.526235 0.671765 0.240729 0.45641 0.0366269 0.619048 0.715226 0.406088 0.882789 2603 2605 chr7 56838414 56844525 chr7:56838414-56844525:-:L1PA3:REF 6 - L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HCT116,HEK293 0.931373 0.650485 0.636628 0.281553 0.744565 0.574257 2604 2606 chr7 57036531 57042552 chr7:57036531-57042552:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.743786 0.662162 0.718434 0.76843 0.318452 0.613636 0.00424628 0.675214 0.808952 0.713555 0.551821 0.851064 2605 2607 chr7 57539590 57540834 chr7:57539590-57540834:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.771704 0.278814 0.634561 0.664239 0.0676393 0.225653 0.00641026 0.458824 0.552156 0.696237 0.191011 0.826705 2606 2608 chr7 58091455 58093722 chr7:58091455-58093722:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.517857 0.298729 0.333768 0.352693 0.122211 0.231183 0.00377358 0.236417 0.313291 0.417143 0.209032 0.515474 2607 2609 chr7 63148831 63154859 chr7:63148831-63154859:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.25156 0.595324 0.459829 0.746471 0.394336 0.715216 0.0343721 0.645933 0.828235 0.799797 0.615729 0.768862 Brouha_2003:0.1 2608 2610 chr7 63534282 63540307 chr7:63534282-63540307:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.75431 0.522727 0.724458 0.840121 0.234783 0.581395 0.00793651 0.795322 0.889241 0.697183 0.57561 0.881356 2609 2611 chr7 65406956 65407953 chr7:65406956-65407953:-:L1P1:REF 1 - L1P1 REF 3prime-truncated ZNF92 HCT116 0.0 2610 2612 chr7 65464494 65470584 chr7:65464494-65470584:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90916 0.974214 0.671978 0.665111 0.895985 0.523573 0.244042 0.971722 0.94592 0.698292 0.95735 0.875252 2611 2613 chr7 66286853 66292884 chr7:66286853-66292884:-:L1HS:REF 12 - L1HS REF full-length TPST1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.080756 0.970588 0.940162 0.982489 0.0637481 0.912611 0.760643 0.75968 0.981481 0.935662 0.96587 0.75174 Rodriguez-Martin_2020:1,Tubio_2014:2 2612 2614 chr7 67126183 67126185 chr7:67126183-67126185:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip7414,Philippe:EXP_ID_1283 TYW1 HeLaS3,HCT116 0.885399 0.861257 2613 2615 chr7 70197328 70203357 chr7:70197328-70203357:+:L1HS:REF 12 + L1HS REF full-length AUTS2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.119608 0.527101 0.900126 0.846851 0.957397 0.647493 0.0112202 0.944902 0.812321 0.897304 0.963513 0.9376 2614 2616 chr7 70838049 70844315 chr7:70838049-70844315:+:L1PA7:REF 6 + L1PA7 REF full-length 2102Ep,HepG2,MRC5,HeLaS3,HCT116,HEK293 0.905172 0.144737 0.50641 0.225 0.403846 0.867647 2615 2617 chr7 76561201 76567355 chr7:76561201-76567355:-:L1PA4:REF 7 - L1PA4 REF full-length LOC100133091 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.866667 0.931034 0.987013 0.973451 0.911765 0.809211 0.909091 2616 2618 chr7 76728485 76734513 chr7:76728485-76734513:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0985626 0.900653 0.950848 0.973984 0.0125755 0.888041 0.0122324 0.614119 0.981906 0.957553 0.922973 0.87984 2617 2619 chr7 77084513 77090684 chr7:77084513-77090684:-:L1PA4:REF 12 - L1PA4 REF full-length FAM185BP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.940615 0.978261 0.971448 0.982712 0.982529 0.961691 0.808142 0.976657 0.986462 0.98125 0.975432 0.98463 2618 2620 chr7 78855267 78861359 chr7:78855267-78861359:-:L1PA5:REF 6 - L1PA5 REF full-length MAGI2 HepG2,HEK293T,HeLaS3,K562,MCF7,HEK293 0.607143 0.9 0.283019 0.00952381 0.445455 0.8 2619 2621 chr7 78887745 78893889 chr7:78887745-78893889:+:L1PA4:REF 12 + L1PA4 REF full-length MAGI2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.875291 0.777983 0.940248 0.974267 0.790226 0.364452 0.00418994 0.488889 0.952381 0.965863 0.755255 0.950355 2620 2622 chr7 79229794 79235811 chr7:79229794-79235811:-:L1PA2:REF 12 - L1PA2 REF full-length MAGI2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.078853 0.982857 0.971282 0.989761 0.933371 0.753998 0.0248996 0.82644 0.985121 0.941075 0.960033 0.879545 2621 2623 chr7 79941091 79947236 chr7:79941091-79947236:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.84456 0.0321199 0.751572 0.962046 0.70235 0.116751 0.00591716 0.0582192 0.980282 0.920213 0.33121 0.95122 2622 2624 chr7 80713105 80719172 chr7:80713105-80719172:+:L1PA3:REF 9 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,HEK293,H1 0.902778 0.444444 0.957265 0.982869 0.981481 0.944444 0.925 1.0 0.925926 2623 2625 chr7 81824078 81830172 chr7:81824078-81830172:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.830116 0.0135135 0.384 0.564378 0.57197 0.737864 0.0 0.135802 0.741573 0.616667 0.474638 0.820755 2624 2626 chr7 82633099 82636876 chr7:82633099-82636876:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.834906 0.0120968 0.591716 0.880576 0.702703 0.93361 0.0037594 0.293388 0.933511 0.75 0.785714 0.892617 2625 2627 chr7 82649854 82652079 chr7:82649854-82652079:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910638 0.39116 0.715686 0.914645 0.802295 0.631579 0.00819672 0.795812 0.975089 0.858333 0.846154 0.950728 2626 2628 chr7 83623760 83630242 chr7:83623760-83630242:-:L1PA7:REF 12 - L1PA7 REF full-length SEMA3E 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873016 0.352941 0.387755 0.714286 0.804348 0.181818 0.0 0.7 0.863636 0.633333 0.828125 0.958333 2627 2629 chr7 83989325 83995342 chr7:83989325-83995342:-:L1PA2:REF 12 - L1PA2 REF full-length SEMA3A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.524044 0.934465 0.983106 0.980176 0.978349 0.911308 0.0580913 0.941581 0.987603 0.96423 0.979353 0.980966 2628 2630 chr7 84049711 84055730 chr7:84049711-84055730:-:L1PA3:REF 12 - L1PA3 REF full-length SEMA3A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.362495 0.820861 0.829363 0.832309 0.641341 0.988481 0.014293 0.772596 0.900946 0.935558 0.828196 0.868038 2629 2631 chr7 84062409 84068436 chr7:84062409-84068436:+:L1PA2:REF 12 + L1PA2 REF full-length SEMA3A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.218265 0.984035 0.98455 0.985127 0.975978 0.870363 0.0237885 0.949557 0.947926 0.962621 0.988796 0.963388 2630 2632 chr7 84150229 84151670 chr7:84150229-84151670:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated SEMA3A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.055094 0.907964 0.982123 0.983718 0.00762746 0.975912 0.0354974 0.943796 0.988153 0.982125 0.956108 0.0958751 2631 2633 chr7 85249854 85255879 chr7:85249854-85255879:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.00977199 0.544218 0.873913 0.91918 0.904762 0.5 0.0 0.709677 0.9875 0.903766 0.958015 0.875 2632 2634 chr7 85329687 85335739 chr7:85329687-85335739:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.143967 0.777943 0.861126 0.870852 0.746616 0.65827 0.015891 0.708397 0.937461 0.954427 0.880756 0.855696 2633 2635 chr7 85790914 85791880 chr7:85790914-85791880:+:L1P2:REF 11 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.836735 0.0754717 0.454545 0.523256 0.97561 0.129032 0.030303 0.981481 0.361702 0.756757 0.944444 2634 2636 chr7 86340208 86346233 chr7:86340208-86346233:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.172113 0.474265 0.710762 0.735558 0.012 0.576389 0.0153846 0.641694 0.967742 0.731343 0.707317 0.947826 2635 2637 chr7 86375397 86380999 chr7:86375397-86380999:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.691729 0.21627 0.370536 0.381194 0.749296 0.18593 0.027027 0.153061 0.831135 0.542857 0.486911 0.93 2636 2638 chr7 87039756 87045768 chr7:87039756-87045768:+:L1PA2:REF 12 + L1PA2 REF full-length KIAA1324L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0234035 0.34082 0.625925 0.732902 0.263479 0.00716648 0.00445104 0.944175 0.00966387 0.761462 0.916271 0.02622 2637 2639 chr7 87950137 87956279 chr7:87950137-87956279:-:L1PA3:REF 12 - L1PA3 REF full-length ADAM22 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.897016 0.844307 0.731551 0.812869 0.953747 0.809122 0.0159405 0.94832 0.987701 0.720867 0.960912 0.955326 2638 2640 chr7 88077364 88083495 chr7:88077364-88083495:+:L1PA4:REF 12 + L1PA4 REF full-length ADAM22 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.933086 0.911693 0.815618 0.69401 0.975267 0.780021 0.0047356 0.23262 0.978402 0.756831 0.94 0.974249 2639 2641 chr7 89463101 89466532 chr7:89463101-89466532:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.840753 0.529661 0.597472 0.659112 0.274696 0.12381 0.0150263 0.763158 0.911607 0.575701 0.363319 0.771605 2640 2642 chr7 89718712 89720168 chr7:89718712-89720168:+:L1P2:REF 6 + L1P2 REF 3prime-truncated 2102Ep,HepG2,MRC5,MCF7,HCT116,HEK293 0.642857 0.458333 0.184524 0.8125 1.0 0.535714 2641 2643 chr7 90359154 90365278 chr7:90359154-90365278:-:L1PA6:REF 12 - L1PA6 REF full-length GTPBP10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.944785 0.985714 0.973545 0.989324 0.969072 0.93 0.98773 0.971429 0.975 1.0 0.975309 0.981481 2642 2644 chr7 90634134 90640272 chr7:90634134-90640272:-:L1PA3:REF 11 - L1PA3 REF full-length CDK14 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.530702 0.810976 0.932432 0.922025 0.939394 0.936 0.00680272 0.220183 0.920139 0.952 0.965217 2643 2645 chr7 90927657 90929342 chr7:90927657-90929342:-:L1P2:REF 5 - L1P2 REF 3prime-truncated CDK14 HepG2,MRC5,HEK293T,K562,MCF7 0.5 0.8 0.15 0.0 0.0 2644 2646 chr7 91056410 91062550 chr7:91056410-91062550:-:L1PA4:REF 12 - L1PA4 REF full-length CDK14 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918301 0.544751 0.971503 0.980905 0.953376 0.961924 0.00811688 0.908068 0.968586 0.964072 0.960684 0.985258 2645 2647 chr7 91173443 91179517 chr7:91173443-91179517:+:L1HS:REF 7 + L1HS REF full-length CDK14 HepG2,BJ,MRC5,HEK293T,K562,HCT116,HEK293 0.733945 0.981651 1.0 0.953488 0.00847458 0.898396 0.941176 2646 2648 chr7 91389493 91395509 chr7:91389493-91395509:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.233333 0.695502 0.67619 0.781116 0.369863 0.358108 0.0619048 0.0763889 0.568807 0.91 0.799127 0.705036 2647 2649 chr7 91476684 91482819 chr7:91476684-91482819:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.917448 0.559231 0.787903 0.845012 0.51123 0.634318 0.0553078 0.176353 0.969919 0.859895 0.813072 0.967632 2648 2650 chr7 91506736 91512867 chr7:91506736-91512867:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891892 0.480485 0.653021 0.686651 0.602459 0.345865 0.0711679 0.789168 0.952247 0.708054 0.804714 0.894942 2649 2651 chr7 91583270 91589300 chr7:91583270-91589300:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.110517 0.909847 0.869159 0.778545 0.904372 0.790763 0.0215599 0.973414 0.89042 0.881215 0.962145 0.934783 2650 2652 chr7 91589650 91595794 chr7:91589650-91595794:+:L1PA3:REF 10 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.853004 0.331371 0.619048 0.792816 0.666017 0.588146 0.964471 0.848665 0.879567 0.962747 2651 2653 chr7 91790478 91791370 chr7:91790478-91791370:+:L1PA6:REF 11 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.726496 0.329787 0.851852 0.66 0.542636 0.292929 0.0 0.404762 0.979167 0.821429 0.847953 2652 2654 chr7 91903682 91909706 chr7:91903682-91909706:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.409812 0.886948 0.865992 0.852802 0.90078 0.826794 0.698538 0.968264 0.972558 0.842105 0.942773 0.908726 2653 2655 chr7 91986186 91986534 chr7:91986186-91986534:-:L1PA8A:REF 2 - L1PA8A REF 3prime-truncated AKAP9 MRC5,HEK293 0.991379 0.964706 2654 2656 chr7 92183756 92189878 chr7:92183756-92189878:-:L1PA3:REF 12 - L1PA3 REF full-length CYP51A1-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.935391 0.973995 0.985152 0.982417 0.967804 0.982278 0.975033 0.979651 0.986769 0.949675 0.975439 0.969374 2655 2657 chr7 93166604 93170864 chr7:93166604-93170864:-:L1P2:REF 9 - L1P2 REF 3prime-truncated HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.181818 0.333333 0.460465 0.633333 0.0392157 0.574074 0.382716 0.555556 0.376812 2656 2658 chr7 93341964 93347980 chr7:93341964-93347980:+:L1PA3:REF 9 + L1PA3 REF full-length VPS50 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293 0.871622 0.986175 0.992701 0.984914 0.977578 0.889706 0.988889 0.981132 0.994012 2657 2659 chr7 93586902 93591767 chr7:93586902-93591767:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.444656 0.926747 0.899525 0.920143 0.00375397 0.00288351 0.0038115 0.34101 0.97521 0.896617 0.974021 0.932601 2658 2660 chr7 93787624 93793679 chr7:93787624-93793679:-:L1HS:REF 9 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293 0.65873 0.878219 0.874869 0.913475 0.968567 0.0367115 0.983687 0.887991 0.889189 Brouha_2003:0.0 2659 2661 chr7 94968695 94970632 chr7:94968695-94970632:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated PPP1R9A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.862069 0.487013 0.990769 0.710623 0.933718 0.985185 0.0 0.905405 0.970037 0.821705 0.97 0.937984 2660 2662 chr7 95376777 95379224 chr7:95376777-95379224:+:L1P2:REF 12 + L1P2 REF 3prime-truncated PON3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.892421 0.971123 0.674183 0.640249 0.884146 0.955513 0.083558 0.91598 0.979167 0.659898 0.912195 0.953704 2661 2663 chr7 95831968 95837992 chr7:95831968-95837992:-:L1PA3:REF 12 - L1PA3 REF full-length DYNC1I1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.147887 0.940141 0.84 0.855019 0.909357 0.761538 0.0384615 0.793103 0.912214 0.8867 0.927114 0.935484 2662 2664 chr7 96288293 96294442 chr7:96288293-96294442:+:L1PA5:REF 12 + L1PA5 REF full-length SLC25A13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.94051 0.974643 0.976596 0.978148 0.94964 0.972028 0.982368 0.966049 0.978892 0.950495 0.966292 0.987879 2663 2665 chr7 96552195 96558214 chr7:96552195-96558214:-:L1PA2:REF 12 - L1PA2 REF full-length SEM1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.253508 0.920695 0.798965 0.763108 0.968843 0.758344 0.047836 0.935157 0.946588 0.823417 0.973089 0.940727 2664 2666 chr7 96579968 96585972 chr7:96579968-96585972:-:L1PA3:REF 12 - L1PA3 REF full-length SEM1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.73913 0.67601 0.523214 0.587879 0.715556 0.431858 0.00795229 0.384067 0.664733 0.705263 0.752852 0.785024 2665 2667 chr7 96846650 96852680 chr7:96846650-96852680:-:L1HS:REF 3 - L1HS REF full-length HepG2,MCF7,IMR90 0.944361 0.96988 0.78291 2666 2668 chr7 97210061 97216165 chr7:97210061-97216165:-:L1PA6:REF 11 - L1PA6 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.734904 0.229032 0.554044 0.702128 0.149712 0.0564417 0.348754 0.789216 0.454802 0.705069 0.805643 2667 2669 chr7 97258074 97264217 chr7:97258074-97264217:-:L1PA3:REF 1 - L1PA3 REF full-length MRC5 0.748148 2668 2670 chr7 97329746 97332826 chr7:97329746-97332826:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.834821 0.374005 0.529412 0.616482 0.910891 0.163522 0.0 0.865672 0.916399 0.536723 0.962329 0.905983 2669 2671 chr7 97532571 97535703 chr7:97532571-97535703:+:L1PA3:REF 8 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.896825 0.663265 0.832061 0.873016 0.288889 0.908163 0.900662 0.924528 2670 2672 chr7 97613656 97619688 chr7:97613656-97619688:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.187987 0.822866 0.737174 0.777821 0.945875 0.623711 0.0297521 0.75256 0.873708 0.789104 0.913777 0.916237 2671 2673 chr7 97777899 97779479 chr7:97777899-97779479:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.723938 0.782166 0.716135 0.552645 0.931419 0.667702 0.0701048 0.878919 0.879615 0.721959 0.873204 0.948378 2672 2674 chr7 97810373 97816490 chr7:97810373-97816490:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.788509 0.166003 0.495037 0.812375 0.831325 0.524422 0.0106383 0.862774 0.880342 0.716814 0.889619 0.696607 2673 2675 chr7 99654085 99660201 chr7:99654085-99660201:-:L1PA4:REF 12 - L1PA4 REF full-length ZSCAN25 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891463 0.974474 0.898551 0.867574 0.855156 0.915909 0.779772 0.953425 0.96945 0.870536 0.902778 0.936937 2674 2676 chr7 99686019 99689554 chr7:99686019-99689554:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated CYP3A7-CYP3A51P 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908676 0.943548 0.797153 0.815254 0.774744 0.779343 0.34 0.205575 0.9375 0.776371 0.889908 0.886525 2675 2677 chr7 99799759 99803753 chr7:99799759-99803753:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.876953 0.977982 0.509363 0.747436 0.246183 0.138514 0.832976 0.888889 0.921053 0.681159 0.75179 0.881057 2676 2678 chr7 99809199 99815231 chr7:99809199-99815231:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.117601 0.986024 0.811137 0.872673 0.834632 0.8 0.954324 0.962092 0.971864 0.855055 0.914719 0.90681 2677 2679 chr7 102780677 102786841 chr7:102780677-102786841:+:L1PA4:REF 12 + L1PA4 REF full-length FAM185A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.955437 0.989683 0.987275 0.979039 0.979186 0.966044 0.978927 0.979014 0.985523 0.991853 0.983535 0.97446 2678 2680 chr7 103037829 103043543 chr7:103037829-103043543:+:L1P2:REF 12 + L1P2 REF 3prime-truncated FBXL13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.626106 0.625148 0.813449 0.671595 0.893491 0.967914 0.249527 0.793734 0.839161 0.703704 0.959569 0.812245 2679 2681 chr7 103404195 103406652 chr7:103404195-103406652:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated SLC26A5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890909 0.810219 0.486957 0.596 0.783186 0.453488 0.363636 0.87574 0.933333 0.492063 0.915663 0.833333 2680 2682 chr7 103457779 103463214 chr7:103457779-103463214:-:L1P3:REF 1 - L1P3 REF 3prime-truncated LOC101927870 MRC5 0.5 2681 2683 chr7 104058823 104061584 chr7:104058823-104061584:+:L1P2:REF 10 + L1P2 REF 3prime-truncated 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.669173 0.578059 0.772069 0.478378 0.5875 0.620209 0.457143 0.722689 0.64532 0.782396 2682 2684 chr7 104209736 104215889 chr7:104209736-104215889:+:L1PA3:REF 12 + L1PA3 REF full-length ORC5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.860104 0.882729 0.875 0.971145 0.915433 0.972318 0.847826 0.87766 0.958515 0.888889 0.975169 0.954774 2683 2685 chr7 104276530 104282690 chr7:104276530-104282690:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871345 0.334443 0.643573 0.750911 0.231676 0.462888 0.0116618 0.293884 0.709384 0.712014 0.732611 0.89942 2684 2686 chr7 104557650 104563706 chr7:104557650-104563706:-:L1PA2:REF 12 - L1PA2 REF full-length LHFPL3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.402277 0.700061 0.722909 0.681424 0.624144 0.60091 0.0745387 0.774623 0.788162 0.722628 0.717025 0.859964 2685 2687 chr7 104729752 104735841 chr7:104729752-104735841:-:L1PA5:REF 12 - L1PA5 REF full-length LHFPL3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.729282 0.300195 0.376777 0.454054 0.329082 0.2 0.0168067 0.39418 0.735023 0.6 0.600503 0.869792 2686 2688 chr7 104864133 104870254 chr7:104864133-104870254:+:L1PA4:REF 12 + L1PA4 REF full-length LHFPL3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.767624 0.0793358 0.540741 0.63079 0.18799 0.0691244 0.0408602 0.391858 0.351648 0.578616 0.621381 0.941176 2687 2689 chr7 106208730 106210560 chr7:106208730-106210560:+:L1P1:REF 1 + L1P1 REF 3prime-truncated MRC5 0.827957 2688 2690 chr7 106302140 106304954 chr7:106302140-106304954:-:L1P3:REF 1 - L1P3 REF 3prime-truncated MRC5 0.0 2689 2691 chr7 106320178 106321936 chr7:106320178-106321936:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906504 0.0689655 0.786802 0.82783 0.113636 0.78125 0.270588 0.724299 0.95122 0.720339 0.747826 0.9 2690 2692 chr7 106491298 106491763 chr7:106491298-106491763:+:L1P3:REF 2 + L1P3 REF 3prime-truncated MRC5,HEK293 0.716418 0.448276 2691 2693 chr7 106684390 106690518 chr7:106684390-106690518:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.826087 0.261131 0.865041 0.874016 0.520924 0.466019 0.656925 0.433898 0.911811 0.963889 0.80389 0.846154 2692 2694 chr7 106709407 106715579 chr7:106709407-106715579:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.270073 2693 2695 chr7 106918808 106924960 chr7:106918808-106924960:+:L1PA6:REF 12 + L1PA6 REF full-length PIK3CG 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919355 0.118908 0.846995 0.944304 0.926582 0.0374532 0.591489 0.947991 0.986226 0.929825 0.922006 0.97479 2694 2696 chr7 107507907 107514058 chr7:107507907-107514058:+:L1PA4:REF 12 + L1PA4 REF full-length COG5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.960456 0.984224 0.986765 0.977064 0.961216 0.979292 0.967122 0.95627 0.987975 0.946552 0.988598 0.975281 2695 2697 chr7 107646332 107652477 chr7:107646332-107652477:-:L1PA4:REF 12 - L1PA4 REF full-length SLC26A4-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885106 0.873329 0.916144 0.93272 0.912088 0.829333 0.516322 0.908515 0.980162 0.901934 0.936 0.939351 2696 2698 chr7 108188818 108188820 chr7:108188818-108188820:+:L1HS:NONREF 11 + L1HS KNR euL1db:mrip7573,1KGP:L1_umary_LINE1_1566,Philippe:EXP_ID_1302 NRCAM 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.257642 0.857773 0.896608 0.953372 0.971667 0.933594 0.849844 0.982521 0.978108 0.970844 0.899582 2697 2699 chr7 108215514 108218396 chr7:108215514-108218396:-:L1P3:REF 6 - L1P3 REF 3prime-truncated NRCAM HepG2,BJ,MRC5,HEK293T,K562,IMR90 0.396825 0.809524 0.573099 0.787879 0.4375 0.547619 2698 2700 chr7 108272748 108278897 chr7:108272748-108278897:-:L1PA6:REF 11 - L1PA6 REF full-length NRCAM 2102Ep,HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856338 0.707885 0.835821 0.960557 0.789474 0.600332 0.964865 0.975207 0.833333 0.984772 0.989899 2699 2701 chr7 108387569 108393732 chr7:108387569-108393732:-:L1PA5:REF 12 - L1PA5 REF full-length NRCAM 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.842105 0.921525 0.689103 0.74159 0.953086 0.44898 0.0222222 0.973333 0.952941 0.78 0.969325 0.954545 2700 2702 chr7 108937532 108943685 chr7:108937532-108943685:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.875912 0.299029 0.606061 0.610619 0.172521 0.261981 0.0126459 0.591249 0.952286 0.524412 0.292917 0.907173 2701 2703 chr7 109687136 109693273 chr7:109687136-109693273:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.804478 0.027234 0.437838 0.405341 0.113721 0.0704846 0.00430108 0.567318 0.887628 0.353723 0.450588 0.89726 2702 2704 chr7 109719133 109725270 chr7:109719133-109725270:+:L1PA4:REF 10 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293 0.836735 0.375635 0.607477 0.699203 0.417391 0.169355 0.00704225 0.0166667 0.949541 0.881944 2703 2705 chr7 109794983 109801140 chr7:109794983-109801140:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.799139 0.299139 0.632075 0.704532 0.165089 0.481422 0.0056338 0.83351 0.894605 0.712121 0.566832 0.895131 2704 2706 chr7 109905426 109906019 chr7:109905426-109906019:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.815068 0.487754 0.750526 0.860759 0.46639 0.547478 0.00690521 0.821159 0.906653 0.863636 0.737013 0.873391 2705 2707 chr7 109919039 109925231 chr7:109919039-109925231:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.846039 0.162445 0.543038 0.783766 0.151475 0.334443 0.0188889 0.777622 0.978052 0.735294 0.475387 0.91762 2706 2708 chr7 110030129 110036289 chr7:110030129-110036289:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885068 0.209085 0.611399 0.854713 0.128402 0.355263 0.00910364 0.623665 0.89238 0.808176 0.308121 0.934848 2707 2709 chr7 110472219 110478325 chr7:110472219-110478325:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.934347 0.701517 0.864155 0.93534 0.523703 0.598459 0.00927536 0.884684 0.978711 0.931522 0.827232 0.922919 2708 2710 chr7 110557531 110563563 chr7:110557531-110563563:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0941558 0.827839 0.816823 0.92814 0.321006 0.80315 0.00598563 0.893579 0.93882 0.960997 0.915913 0.879479 2709 2711 chr7 110707004 110713024 chr7:110707004-110713024:-:L1HS:REF 12 - L1HS REF full-length IMMP2L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.245783 0.93027 0.943122 0.959319 0.555326 0.928702 0.694325 0.959744 0.980198 0.954186 0.924414 0.968421 Brouha_2003:2.1 2710 2712 chr7 111243515 111249546 chr7:111243515-111249546:-:L1HS:REF 12 - L1HS REF full-length IMMP2L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.217445 0.976995 0.965398 0.97305 0.926283 0.954806 0.932479 0.967599 0.980707 0.966812 0.959276 0.942331 2711 2713 chr7 111445694 111451725 chr7:111445694-111451725:+:L1PA2:REF 11 + L1PA2 REF full-length IMMP2L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.38526 0.972258 0.973766 0.965358 0.938502 0.973556 0.550841 0.981313 0.966994 0.976589 0.977617 2712 2714 chr7 111499821 111500000 chr7:111499821-111500000:+:L1P1:REF 9 + L1P1 REF 3prime-truncated IMMP2L 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293 0.934211 0.987179 0.952381 0.96748 0.973684 0.953488 0.790123 0.983051 1.0 2713 2715 chr7 111703193 111706648 chr7:111703193-111706648:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated MRC5 0.00492611 2714 2716 chr7 111963193 111969223 chr7:111963193-111969223:+:L1HS:REF 12 + L1HS REF full-length DOCK4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.138745 0.980573 0.886971 0.983994 0.942966 0.963317 0.0319264 0.934028 0.989774 0.952746 0.972856 0.879699 2715 2717 chr7 112916452 112921936 chr7:112916452-112921936:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated BMT2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.846743 0.963606 0.967119 0.909624 0.965693 0.532886 0.625943 0.0493392 0.972904 0.982595 0.963331 0.969986 2716 2718 chr7 113257696 113263724 chr7:113257696-113263724:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.102428 0.623815 0.824544 0.958001 0.468179 0.649589 0.0180248 0.531687 0.97827 0.938949 0.919815 0.904195 2717 2719 chr7 113533338 113538585 chr7:113533338-113538585:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.864301 0.460326 0.680296 0.688698 0.736133 0.407209 0.27623 0.700737 0.855169 0.763314 0.697388 0.869184 2718 2720 chr7 113742900 113748900 chr7:113742900-113748900:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.128102 0.868305 0.814815 0.945524 0.899317 0.650679 0.0158578 0.774498 0.973633 0.921228 0.847588 0.910287 2719 2721 chr7 113776122 113782152 chr7:113776122-113782152:-:L1HS:REF 7 - L1HS REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90 0.744526 0.821091 0.8 0.697842 0.732162 0.968437 0.681818 Brouha_2003:3.8 2720 2722 chr7 115025114 115031115 chr7:115025114-115031115:-:L1PA2:REF 11 - L1PA2 REF full-length MDFIC 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.15 0.751295 0.843243 0.894545 0.860656 0.72973 0.0 0.232877 0.935135 0.856322 0.882075 2721 2723 chr7 115167768 115173789 chr7:115167768-115173789:-:L1PA3:REF 12 - L1PA3 REF full-length LINC01392 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.928962 0.872759 0.963766 0.983344 0.963047 0.957555 0.0182513 0.777571 0.982916 0.982716 0.970556 0.980595 2722 2724 chr7 116047047 116051301 chr7:116047047-116051301:+:L1PA5:REF 8 + L1PA5 REF full-length 2102Ep,HepG2,MRC5,HEK293T,K562,MCF7,HCT116,HEK293 0.92 0.328571 0.92069 0.833333 0.0 0.576471 0.915789 0.816667 2723 2725 chr7 116371251 116377392 chr7:116371251-116377392:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.939823 0.80641 0.959596 0.979182 0.961433 0.97201 0.437262 0.961228 0.98951 0.971875 0.955932 0.991453 2724 2726 chr7 116408860 116414874 chr7:116408860-116414874:+:L1PA3:REF 10 + L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.758242 0.883263 0.95122 0.864954 0.981928 0.812903 0.988166 0.988732 0.971523 0.992063 2725 2727 chr7 118122224 118128365 chr7:118122224-118128365:+:L1PA6:REF 8 + L1PA6 REF full-length HepG2,BJ,MRC5,HeLaS3,K562,MCF7,IMR90,HEK293 0.211765 0.633333 0.805085 0.875 0.015625 0.55 0.85 0.875 2726 2728 chr7 119586709 119592736 chr7:119586709-119592736:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.65247 0.829167 0.822306 0.916785 0.662857 0.716012 0.492958 0.694309 0.968366 0.787081 0.852751 0.958549 2727 2729 chr7 119854820 119860951 chr7:119854820-119860951:+:L1PA4:REF 12 + L1PA4 REF full-length LINC02476 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878158 0.330396 0.584906 0.748106 0.274534 0.24605 0.643377 0.180602 0.985025 0.672823 0.412338 0.960663 2728 2730 chr7 121291986 121293970 chr7:121291986-121293970:-:L1P3:REF 1 - L1P3 REF 3prime-truncated CPED1 MRC5 0.430556 2729 2731 chr7 122238520 122244551 chr7:122238520-122244551:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.113069 0.820886 0.839237 0.867692 0.883363 0.0 0.0348837 0.734497 0.0373333 0.823232 0.955056 0.873303 2730 2732 chr7 122278915 122284945 chr7:122278915-122284945:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.03125 0.439587 0.804455 0.684223 0.504416 0.850489 0.0173831 0.873609 0.97947 0.854251 0.940656 0.795375 2731 2733 chr7 123445190 123451212 chr7:123445190-123451212:-:L1PA3:REF 12 - L1PA3 REF full-length IQUB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.775641 0.570694 0.73822 0.848875 0.74036 0.535865 0.205357 0.198068 0.966495 0.783654 0.801932 0.952703 2732 2734 chr7 123527048 123528341 chr7:123527048-123528341:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated IQUB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0764547 0.0123813 0.915503 0.946868 0.0136561 0.938992 0.00879765 0.00750188 0.0211538 0.940855 0.950483 0.556535 2733 2735 chr7 124094093 124100210 chr7:124094093-124100210:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.861619 0.374757 0.634868 0.935335 0.810667 0.574766 0.00789474 0.905594 0.922252 0.758065 0.907162 0.81 2734 2736 chr7 124979441 124985490 chr7:124979441-124985490:-:L1PA3:REF 12 - L1PA3 REF full-length POT1-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.590344 0.63108 0.560353 0.652984 0.488051 0.577528 0.348127 0.16851 0.702953 0.612857 0.599084 0.754753 2735 2737 chr7 125046011 125050112 chr7:125046011-125050112:+:L1P3:REF 12 + L1P3 REF 3prime-truncated POT1-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.875 0.628692 0.471223 0.717213 0.501408 0.832432 0.102564 0.607656 0.926829 0.597484 0.588235 0.932099 2736 2738 chr7 125179570 125181978 chr7:125179570-125181978:-:L1HS:REF 12 - L1HS REF 3prime-truncated LOC101928283 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0592441 0.760029 0.761278 0.712856 0.670445 0.886957 0.0196918 0.343715 0.97431 0.776276 0.81044 0.934383 2737 2739 chr7 125964725 125964727 chr7:125964725-125964727:-:L1HS:NONREF 1 - L1HS KNR Philippe:EXP_ID_1325 HeLaS3 0.779349 2738 2740 chr7 126613401 126619522 chr7:126613401-126619522:+:L1PA5:REF 12 + L1PA5 REF full-length GRM8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.86853 0.696372 0.684902 0.74845 0.456427 0.696221 0.00835422 0.242308 0.973193 0.751984 0.836102 0.960526 2739 2741 chr7 127430518 127430748 chr7:127430518-127430748:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.851711 0.235795 0.609023 0.690661 0.910072 0.0820896 0.00687285 0.875 0.940367 0.614173 0.95539 0.910256 2740 2742 chr7 128292011 128298140 chr7:128292011-128298140:+:L1PA3:REF 6 + L1PA3 REF full-length MGC27345 2102Ep,HepG2,MRC5,HEK293T,HCT116,IMR90 0.820225 0.833333 0.843373 0.8 0.867647 0.871287 2741 2743 chr7 130249390 130255183 chr7:130249390-130255183:-:L1PA6:REF 10 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293,H1 0.635659 0.76087 0.813793 0.831551 0.921429 0.984615 0.158019 0.85641 0.922222 0.981651 2742 2744 chr7 130577156 130577479 chr7:130577156-130577479:+:L1PA2:REF 11 + L1PA2 REF 3prime-truncated COPG2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.342716 0.962997 0.890187 0.897119 0.756696 0.985375 0.902273 0.940166 0.975113 0.887592 0.877833 2743 2745 chr7 130632744 130639197 chr7:130632744-130639197:-:L1PA7:REF 12 - L1PA7 REF full-length COPG2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.941606 0.983333 0.987952 0.864078 0.961749 0.961832 0.964286 0.970588 0.984925 0.95614 0.954839 0.939394 2744 2746 chr7 130800810 130802983 chr7:130800810-130802983:-:L1PA7:REF 4 - L1PA7 REF 3prime-truncated HepG2,MRC5,HeLaS3,K562 0.405882 0.531716 0.616667 0.0 2745 2747 chr7 131182660 131182662 chr7:131182660-131182662:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip7670,Philippe:EXP_ID_1332 MKLN1 IMR90 0.902017 2746 2748 chr7 133889425 133895455 chr7:133889425-133895455:-:L1PA2:REF 11 - L1PA2 REF full-length EXOC4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.110577 0.848993 0.774038 0.969962 0.854015 0.897959 0.526316 0.840206 0.900862 0.923077 0.980707 2747 2749 chr7 136098388 136099692 chr7:136098388-136099692:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910042 0.767034 0.726661 0.786272 0.534543 0.701474 0.756144 0.791967 0.83723 0.83151 0.832174 0.973289 2748 2750 chr7 136222175 136224725 chr7:136222175-136224725:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated MRC5 0.0 2749 2751 chr7 136414180 136420210 chr7:136414180-136420210:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.240095 0.726811 0.73913 0.805851 0.362329 0.56121 0.0666392 0.577873 0.748384 0.811816 0.710777 0.816265 2750 2752 chr7 136774756 136780783 chr7:136774756-136780783:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.355404 0.748756 0.795659 0.834094 0.533189 0.589937 0.0247678 0.625798 0.743531 0.845815 0.714426 0.928458 2751 2753 chr7 136831191 136837216 chr7:136831191-136837216:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.235783 0.839574 0.877441 0.933198 0.656757 0.815707 0.0175024 0.621838 0.877419 0.92485 0.900662 0.813579 2752 2754 chr7 136978456 136984900 chr7:136978456-136984900:-:L1PA7:REF 12 - L1PA7 REF full-length CHRM2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.94964 0.0367647 0.955056 0.980769 0.0415094 0.0941176 0.027027 0.057377 0.324841 1.0 0.934426 0.958904 2753 2755 chr7 137181608 137187601 chr7:137181608-137187601:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.105378 0.730481 0.898372 0.976024 0.329009 0.701021 0.0329268 0.678795 0.827295 0.924797 0.887892 0.904812 2754 2756 chr7 137424398 137430564 chr7:137424398-137430564:+:L1PA3:REF 10 + L1PA3 REF full-length DGKI 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.904494 0.515432 0.982222 0.911901 0.346875 0.0129032 0.197452 0.775229 0.962617 0.905882 2755 2757 chr7 140103315 140109396 chr7:140103315-140109396:-:L1PA5:REF 12 - L1PA5 REF full-length KDM7A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.932489 0.982946 0.983707 0.976923 0.968288 0.980707 0.94 0.979747 0.97671 1.0 0.986928 0.958333 2756 2758 chr7 140709367 140709369 chr7:140709367-140709369:-:L1HS:NONREF 1 - L1HS UNKNR NDUFB2 HeLaS3 0.982249 2757 2759 chr7 141032606 141038609 chr7:141032606-141038609:+:L1PA2:REF 5 + L1PA2 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HCT116 0.226115 0.710526 0.760915 0.636905 0.87037 2758 2760 chr7 141062014 141068042 chr7:141062014-141068042:-:L1HS:REF 12 - L1HS REF full-length TMEM178B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.123788 0.832419 0.76197 0.845008 0.889171 0.670673 0.204826 0.955918 0.876701 0.753145 0.957865 0.889098 2759 2761 chr7 141769961 141776086 chr7:141769961-141776086:-:L1PA4:REF 12 - L1PA4 REF full-length TAS2R4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906557 0.987685 0.982202 0.969039 0.969653 0.970588 0.97331 0.975398 0.985714 0.958115 0.96659 0.983696 2760 2762 chr7 141920659 141926712 chr7:141920659-141926712:-:L1HS:REF 12 - L1HS REF full-length CLEC5A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.264405 0.571695 0.593294 0.790949 0.618257 0.680297 0.155803 0.886675 0.917325 0.725429 0.921875 0.703526 Brouha_2003:11.4 Rodriguez-Martin_2020:3,Tubio_2014:15 2761 2763 chr7 141980085 141986114 chr7:141980085-141986114:-:L1PA3:REF 12 - L1PA3 REF full-length TAS2R38 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0875445 0.754131 0.767173 0.802677 0.301748 0.731667 0.0106316 0.8584 0.928251 0.786913 0.95167 0.909091 2762 2764 chr7 143088273 143094435 chr7:143088273-143094435:+:L1PA4:REF 12 + L1PA4 REF full-length TCAF2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.844175 0.52187 0.664083 0.583093 0.167503 0.220339 0.0119363 0.271287 0.75 0.60961 0.5613 0.880435 2763 2765 chr7 143121570 143121575 chr7:143121570-143121575:+:L1HS:NONREF 2 + L1HS KNR euL1db:mrip7708,1KGP:L1_umary_LINE1_1606,Philippe:EXP_ID_1337 TCAF2 K562,IMR90 0.00911854 0.870307 Beck_2010:62.0 2764 2766 chr7 143160218 143166355 chr7:143160218-143166355:-:L1PA5:REF 12 - L1PA5 REF full-length TCAF2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.68599 0.15625 0.298611 0.218466 0.046589 0.0765766 0.00776699 0.825269 0.305699 0.262136 0.343902 0.568627 2765 2767 chr7 145240322 145242068 chr7:145240322-145242068:-:L1PA3:REF 10 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,IMR90,HEK293,H1 0.885305 0.399466 0.55988 0.648478 0.222222 0.00675676 0.147493 0.627907 0.497525 0.915789 2766 2768 chr7 145412976 145419111 chr7:145412976-145419111:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896801 0.322229 0.653876 0.742651 0.304196 0.462019 0.0102669 0.408393 0.72987 0.758865 0.655546 0.935698 2767 2769 chr7 145966590 145972707 chr7:145966590-145972707:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887801 0.550926 0.66691 0.652015 0.241573 0.564254 0.481244 0.181706 0.767736 0.661172 0.606186 0.947589 2768 2770 chr7 146013558 146019592 chr7:146013558-146019592:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.228404 0.769139 0.823711 0.83701 0.700837 0.743317 0.0155505 0.796211 0.926938 0.775434 0.826107 0.908974 2769 2771 chr7 146042028 146043876 chr7:146042028-146043876:-:L1PA4:REF 9 - L1PA4 REF 3prime-truncated HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.466346 0.667137 0.519108 0.491713 0.10628 0.189189 0.78481 0.686567 0.674312 2770 2772 chr7 146905784 146911817 chr7:146905784-146911817:+:L1PA2:REF 12 + L1PA2 REF full-length CNTNAP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.138185 0.776507 0.819065 0.821016 0.84921 0.705824 0.0158297 0.753307 0.923549 0.859155 0.952381 0.959722 2771 2773 chr7 146928453 146934611 chr7:146928453-146934611:+:L1PA3:REF 6 + L1PA3 REF full-length CNTNAP2 HepG2,MRC5,HEK293T,HCT116,IMR90,HEK293 0.570312 0.77095 0.483568 0.644444 0.736364 0.946667 2772 2774 chr7 147732040 147738166 chr7:147732040-147738166:-:L1PA5:REF 12 - L1PA5 REF full-length CNTNAP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910515 0.448068 0.766551 0.754792 0.643021 0.534606 0.00780234 0.599214 0.824687 0.787546 0.805556 0.944056 2773 2775 chr7 147842591 147848623 chr7:147842591-147848623:-:L1HS:REF 12 - L1HS REF full-length CNTNAP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.233454 0.577629 0.735728 0.699629 0.632184 0.514163 0.008 0.650243 0.829776 0.789733 0.764569 0.915 2774 2776 chr7 147862933 147869109 chr7:147862933-147869109:-:L1PA6:REF 12 - L1PA6 REF full-length CNTNAP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.704248 0.0202117 0.371469 0.321452 0.236158 0.136784 0.0117021 0.320583 0.397727 0.385892 0.331652 0.864023 2775 2777 chr7 150574480 150580621 chr7:150574480-150580621:-:L1PA4:REF 11 - L1PA4 REF full-length GIMAP4 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.817121 0.100152 0.411197 0.493703 0.015411 0.00301205 0.430079 0.483721 0.523364 0.185714 0.758755 2776 2778 chr7 150597094 150602628 chr7:150597094-150602628:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.82906 0.047619 0.515152 0.438095 0.0526316 0.121212 0.0 0.439394 0.425926 0.4 0.365591 0.785714 2777 2779 chr7 150605597 150609905 chr7:150605597-150609905:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.746193 0.23166 0.192843 0.258493 0.0448029 0.0 0.00649351 0.436658 0.203863 0.260073 0.4 0.794118 2778 2780 chr7 150678372 150680224 chr7:150678372-150680224:+:L1P1:REF 12 + L1P1 REF 3prime-truncated GIMAP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.857323 0.49536 0.549046 0.546432 0.0439078 0.421875 0.00237248 0.510938 0.776999 0.579602 0.442786 0.904645 2779 2781 chr7 150706238 150712266 chr7:150706238-150712266:+:L1PA3:REF 11 + L1PA3 REF full-length GIMAP1-GIMAP5 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.783133 0.0431985 0.3118 0.525773 0.111111 0.00854037 0.86855 0.483368 0.451531 0.557377 0.701754 2780 2782 chr7 150807555 150813715 chr7:150807555-150813715:+:L1PA6:REF 12 + L1PA6 REF full-length TMEM176A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.942857 0.561644 0.315789 0.648649 0.165803 0.0485437 0.0258621 0.859375 0.384615 0.522727 0.447059 0.875 2781 2783 chr7 152060477 152066587 chr7:152060477-152066587:-:L1PA5:REF 12 - L1PA5 REF full-length GALNT11 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.809019 0.968056 0.976699 0.952145 0.949064 0.937107 0.780591 0.944231 0.967239 0.955128 0.979592 0.939914 2782 2784 chr7 153316231 153318750 chr7:153316231-153318750:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.864804 0.440678 0.586751 0.575439 0.220311 0.146487 0.00637523 0.405405 0.599773 0.632877 0.559666 0.914425 2783 2785 chr7 153865655 153871799 chr7:153865655-153871799:-:L1PA4:REF 12 - L1PA4 REF full-length DPP6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906005 0.481279 0.722588 0.76212 0.349954 0.454175 0.0176101 0.495974 0.762797 0.701205 0.609827 0.945619 2784 2786 chr7 156909394 156915542 chr7:156909394-156915542:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.85231 0.882748 0.811065 0.898521 0.935201 0.861614 0.455247 0.894456 0.88278 0.891089 0.948744 0.884977 2785 2787 chr7 159298379 159304524 chr7:159298379-159304524:+:L1PA4:REF 1 + L1PA4 REF full-length MRC5 0.153846 2786 2788 chr8 773346 779366 chr8:773346-779366:-:L1PA2:REF 12 - L1PA2 REF full-length DLGAP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.678049 0.8125 0.786822 0.790476 0.696774 0.728205 0.324201 0.932692 0.793296 0.774194 0.941463 0.899371 2787 2789 chr8 1607577 1613555 chr8:1607577-1613555:+:L1PA2:REF 11 + L1PA2 REF full-length DLGAP2 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.205429 0.170299 0.233107 0.177847 0.69583 0.0156645 0.950607 0.862441 0.110145 0.856785 0.285852 2788 2790 chr8 2301964 2307993 chr8:2301964-2307993:-:L1PA3:REF 2 - L1PA3 REF full-length MRC5,K562 0.736 0.016 2789 2791 chr8 3288826 3294970 chr8:3288826-3294970:-:L1PA4:REF 12 - L1PA4 REF full-length CSMD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.922145 0.448347 0.671141 0.666175 0.212349 0.499139 0.00863558 0.243626 0.734641 0.729897 0.562738 0.931818 2790 2792 chr8 3450312 3456444 chr8:3450312-3456444:-:L1PA4:REF 5 - L1PA4 REF full-length CSMD1 2102Ep,BJ,MCF7,HCT116,IMR90 0.837349 0.2 0.1 0.107784 0.120805 2791 2793 chr8 4568160 4574579 chr8:4568160-4574579:-:L1PA7:REF 1 - L1PA7 REF full-length CSMD1 MRC5 0.418367 2792 2794 chr8 4854406 4860419 chr8:4854406-4860419:+:L1PA2:REF 12 + L1PA2 REF full-length CSMD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.692982 0.62256 0.644444 0.703794 0.302239 0.396364 0.00460829 0.149254 0.685484 0.715736 0.616766 0.946602 2793 2795 chr8 5187029 5193146 chr8:5187029-5193146:+:L1PA3:REF 10 + L1PA3 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.610526 0.695122 0.695721 0.271186 0.480315 0.0 0.771845 0.740741 0.70297 0.901235 2794 2796 chr8 6085774 6091899 chr8:6085774-6091899:-:L1PA4:REF 11 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896186 0.474684 0.814986 0.784884 0.447861 0.00952381 0.385093 0.841651 0.821366 0.687414 0.954407 2795 2797 chr8 6191081 6197149 chr8:6191081-6197149:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.945455 0.296296 0.718447 0.633205 0.55914 0.351351 0.0 0.356322 0.482014 0.72093 0.810127 0.76 2796 2798 chr8 8470859 8476906 chr8:8470859-8476906:+:L1HS:REF 10 + L1HS REF full-length 2102Ep,HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.294574 0.910979 0.855932 0.939262 0.876494 0.308715 0.90884 0.907692 0.859589 0.963918 2797 2799 chr8 9654760 9656611 chr8:9654760-9656611:+:L1P1:REF 12 + L1P1 REF 3prime-truncated TNKS 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.928458 0.985978 0.98017 0.978742 0.977731 0.973373 0.97282 0.967249 0.976809 0.984704 0.975765 0.980066 2798 2800 chr8 9815681 9818033 chr8:9815681-9818033:+:L1PA7:REF 10 + L1PA7 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.5 0.487923 0.589912 0.695652 0.0344828 0.04 0.475 0.847826 0.575 0.638889 2799 2801 chr8 9838369 9844793 chr8:9838369-9844793:+:L1PA7:REF 10 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,HEK293,H1 0.811111 0.401015 0.559524 0.505376 0.511111 0.155556 0.0175439 0.914141 0.704545 0.878788 2800 2802 chr8 10932425 10938427 chr8:10932425-10938427:-:L1PA2:REF 11 - L1PA2 REF full-length XKR6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.26538 0.8099 0.747736 0.801832 0.941287 0.74878 0.0953969 0.963261 0.949495 0.969775 0.756258 2801 2803 chr8 11814868 11821002 chr8:11814868-11821002:-:L1PA6:REF 12 - L1PA6 REF full-length FDFT1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.960938 0.938776 0.975369 0.948767 0.957529 0.964912 0.922414 0.818182 0.96732 0.95 0.953271 0.959459 2802 2804 chr8 14361212 14362828 chr8:14361212-14362828:-:L1P2:REF 2 - L1P2 REF 3prime-truncated SGCZ HepG2,MRC5 0.0833333 0.320513 2803 2805 chr8 14803216 14809243 chr8:14803216-14809243:+:L1PA3:REF 12 + L1PA3 REF full-length SGCZ 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.362911 0.576524 0.796853 0.819468 0.60013 0.778785 0.0839552 0.37033 0.824309 0.872763 0.831359 0.90175 2804 2806 chr8 15555981 15562028 chr8:15555981-15562028:-:L1PA2:REF 12 - L1PA2 REF full-length TUSC3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.301333 0.669057 0.972669 0.982676 0.0129366 0.951321 0.506931 0.0870712 0.652653 0.993399 0.952454 0.885449 2805 2807 chr8 15576322 15582323 chr8:15576322-15582323:-:L1PA2:REF 11 - L1PA2 REF full-length TUSC3 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.344754 0.736788 0.99061 0.98723 0.154208 0.00960219 0.996499 0.815521 0.986486 0.979825 0.906934 2806 2808 chr8 16032507 16035341 chr8:16032507-16035341:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.821752 0.245119 0.477535 0.688549 0.0170778 0.5 0.0138067 0.530249 0.436137 0.766423 0.0323326 0.904605 2807 2809 chr8 16204147 16207566 chr8:16204147-16207566:+:L1P1:REF 11 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.953846 0.10084 0.72093 0.831978 0.123596 0.690909 0.0 0.189873 0.533333 0.923077 0.425 2808 2810 chr8 16651004 16651965 chr8:16651004-16651965:-:L1P1:REF 6 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HeLaS3,HCT116 0.884615 0.562914 0.739583 0.955112 0.919643 0.850746 2809 2811 chr8 16670119 16674066 chr8:16670119-16674066:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.189413 0.906519 0.912339 0.97849 0.579901 0.977179 0.0202647 0.89835 0.952495 0.907473 0.914075 0.946825 2810 2812 chr8 16878304 16879397 chr8:16878304-16879397:+:L1P2:REF 4 + L1P2 REF 3prime-truncated HepG2,MRC5,HEK293T,IMR90 0.571429 0.948171 0.727273 0.923077 2811 2813 chr8 16943968 16949995 chr8:16943968-16949995:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.295475 0.895805 0.803408 0.947031 0.754533 0.707276 0.031746 0.747637 0.967633 0.911591 0.936498 0.567689 2812 2814 chr8 17291308 17294896 chr8:17291308-17294896:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated VPS37A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.9 0.974522 0.711538 0.846491 0.661616 0.968354 0.939252 0.968085 0.980159 0.918919 0.456522 0.9375 2813 2815 chr8 19910039 19916128 chr8:19910039-19916128:-:L1PA5:REF 8 - L1PA5 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90 0.045045 0.333333 0.325 0.438596 0.0793651 0.128205 0.308943 0.34 2814 2816 chr8 19930161 19936300 chr8:19930161-19936300:+:L1PA4:REF 12 + L1PA4 REF full-length LPL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.914286 0.755102 0.873626 0.900778 0.9447 0.89939 0.792453 0.839827 0.916031 0.920635 0.944196 0.955665 2815 2817 chr8 20742703 20748777 chr8:20742703-20748777:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886029 0.334333 0.616 0.653552 0.126801 0.206667 0.0127877 0.0591398 0.502336 0.666667 0.912651 0.784689 2816 2818 chr8 21825719 21831739 chr8:21825719-21831739:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.811508 0.813589 0.723404 0.760303 0.762431 0.519674 0.0102686 0.793738 0.884317 0.804569 0.885163 0.919913 2817 2819 chr8 23645193 23651219 chr8:23645193-23651219:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.290743 0.863248 0.89083 0.900301 0.769668 0.886957 0.0773854 0.919854 0.89833 0.912206 0.966518 0.894022 2818 2820 chr8 24448685 24454809 chr8:24448685-24454809:-:L1PA3:REF 12 - L1PA3 REF full-length LOC101929294 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880531 0.75286 0.795343 0.82455 0.709622 0.81201 0.00581395 0.821782 0.735385 0.834971 0.876636 0.919732 2819 2821 chr8 24839573 24845719 chr8:24839573-24845719:+:L1PA3:REF 11 + L1PA3 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.143362 0.517181 0.633762 0.51298 0.629685 0.00775194 0.341991 0.470925 0.551351 0.859675 0.865574 2820 2822 chr8 25654942 25660944 chr8:25654942-25660944:-:L1PA3:REF 8 - L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,HCT116,HEK293 0.569231 0.727273 0.625498 0.583333 0.369048 0.144444 0.975 0.857143 2821 2823 chr8 25730343 25736354 chr8:25730343-25736354:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.169811 0.927928 0.886028 0.864726 0.832957 0.788484 0.10538 0.0168324 0.899187 0.781489 0.967937 0.88756 2822 2824 chr8 26395612 26401579 chr8:26395612-26401579:+:L1PA2:REF 12 + L1PA2 REF full-length BNIP3L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.161085 0.948654 0.980063 0.977892 0.937404 0.959091 0.966457 0.935834 0.986089 0.980392 0.920094 0.851695 2823 2825 chr8 27057852 27063983 chr8:27057852-27063983:-:L1PA5:REF 12 - L1PA5 REF full-length MIR548H4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.713873 0.681905 0.701577 0.506281 0.244094 0.139759 0.0159011 0.142012 0.625307 0.555825 0.753219 0.825581 2824 2826 chr8 27113618 27119645 chr8:27113618-27119645:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.804728 0.816681 0.759774 0.726908 0.488026 0.720541 0.0222717 0.582306 0.772649 0.783976 0.782941 0.845956 2825 2827 chr8 27549392 27555435 chr8:27549392-27555435:-:L1PA3:REF 12 - L1PA3 REF full-length EPHX2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.820056 0.917458 0.774729 0.746173 0.83871 0.801184 0.706885 0.712538 0.873599 0.783977 0.852167 0.853659 2826 2828 chr8 31231264 31237418 chr8:31231264-31237418:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.860795 0.181448 0.857847 0.819228 0.872279 0.594633 0.239064 0.832618 0.930586 0.82906 0.960944 0.968153 2827 2829 chr8 31566107 31571502 chr8:31566107-31571502:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.780702 0.118182 0.359873 0.402235 0.0 0.0496454 0.01 0.103448 0.157303 0.353333 0.484163 0.903061 2828 2830 chr8 31851611 31857633 chr8:31851611-31857633:-:L1PA3:REF 4 - L1PA3 REF full-length NRG1 2102Ep,HepG2,MRC5,HCT116 0.946154 0.619318 0.931751 0.834862 2829 2831 chr8 34438302 34443846 chr8:34438302-34443846:+:L1P2:REF 1 + L1P2 REF 3prime-truncated MRC5 0.470588 2830 2832 chr8 34535404 34540356 chr8:34535404-34540356:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891304 0.45122 0.70229 0.756637 0.326316 0.493506 0.0 0.2 0.875 0.759259 0.925 1.0 2831 2833 chr8 35171472 35177508 chr8:35171472-35177508:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.823212 0.74926 0.791237 0.770867 0.578534 0.734811 0.043024 0.514851 0.790909 0.779324 0.778603 0.962225 2832 2834 chr8 35528045 35534071 chr8:35528045-35534071:-:L1PA2:REF 12 - L1PA2 REF full-length UNC5D 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.686275 0.829119 0.839578 0.818321 0.645362 0.637608 0.0273802 0.757303 0.854576 0.83631 0.937561 0.948063 2833 2835 chr8 36195257 36201393 chr8:36195257-36201393:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.892082 0.246337 0.6378 0.631783 0.394627 0.407089 0.0171527 0.637978 0.671733 0.562021 0.925806 2834 2836 chr8 36388573 36394608 chr8:36388573-36394608:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.154376 0.583738 0.740516 0.74652 0.350849 0.581633 0.0132325 0.653488 0.806808 0.76386 0.621951 0.937622 2835 2837 chr8 36725762 36731905 chr8:36725762-36731905:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.0 2836 2838 chr8 37460279 37466395 chr8:37460279-37466395:+:L1PA3:REF 9 + L1PA3 REF full-length LINC01605 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293 0.907407 0.734884 0.918367 0.972222 0.951049 0.0 0.888889 0.933333 0.959596 2837 2839 chr8 40016397 40022547 chr8:40016397-40022547:-:L1PA5:REF 12 - L1PA5 REF full-length IDO2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.865639 0.472603 0.733716 0.719221 0.384365 0.771845 0.0131004 0.868056 0.633391 0.736842 0.857715 0.837838 2838 2840 chr8 40138223 40144344 chr8:40138223-40144344:-:L1PA4:REF 12 - L1PA4 REF full-length TCIM 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.848889 0.961538 0.926531 0.884532 0.325926 0.825758 0.00595238 0.820513 0.420814 0.885965 0.853881 0.910569 2839 2841 chr8 40432212 40438240 chr8:40432212-40438240:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.220486 0.921124 0.934838 0.948921 0.72833 0.937266 0.0759013 0.969912 0.908381 0.940058 0.965094 0.939474 2840 2842 chr8 40575655 40575657 chr8:40575655-40575657:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip7866,Philippe:EXP_ID_1361 ZMAT4 IMR90 0.986301 2841 2843 chr8 40647061 40653096 chr8:40647061-40653096:+:L1PA2:REF 12 + L1PA2 REF full-length ZMAT4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.416051 0.700809 0.903846 0.9002 0.506007 0.809593 0.198113 0.928889 0.763903 0.936842 0.903286 0.923267 2842 2844 chr8 43110936 43113064 chr8:43110936-43113064:+:L1P1:REF 12 + L1P1 REF 3prime-truncated POMK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923077 0.954545 0.959799 0.979742 0.963964 0.873786 0.941748 0.966667 0.963964 0.9375 0.993421 0.948454 2843 2845 chr8 43113063 43114759 chr8:43113063-43114759:-:L1P1:REF 12 - L1P1 REF 3prime-truncated POMK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.965197 0.968366 0.995134 0.989412 0.982162 0.993119 0.967143 1.0 0.99093 0.985656 0.981997 0.989831 2844 2846 chr8 43260607 43266588 chr8:43260607-43266588:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.678523 0.553047 0.576199 0.544514 0.398286 0.431843 0.0199857 0.818505 0.826739 0.514118 0.646937 0.825688 2845 2847 chr8 43307287 43313276 chr8:43307287-43313276:-:L1PA2:REF 11 - L1PA2 REF full-length POTEA 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908224 0.243243 0.599379 0.637452 0.28022 0.00524934 0.956522 0.973804 0.662946 0.846154 0.810811 2846 2848 chr8 43320522 43326578 chr8:43320522-43326578:-:L1PA3:REF 3 - L1PA3 REF full-length POTEA 2102Ep,BJ,MRC5 0.180328 0.612903 0.6 2847 2849 chr8 43391074 43397080 chr8:43391074-43397080:-:L1PA2:REF 7 - L1PA2 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,HEK293,H1 0.864078 0.376623 0.448037 0.0336134 0.0857143 0.530303 0.75 2848 2850 chr8 43480071 43486196 chr8:43480071-43486196:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.585987 0.189474 0.279762 0.2 0.0471204 0.047619 0.037037 0.774194 0.886905 0.392857 0.0675676 0.631579 2849 2851 chr8 46608147 46610249 chr8:46608147-46610249:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated ASNSP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.675105 0.226562 0.51626 0.531486 0.63754 0.361538 0.545977 0.690141 0.571429 0.54717 0.658768 0.576642 2850 2852 chr8 46691805 46694217 chr8:46691805-46694217:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.586957 0.0186335 0.0357143 0.0273973 0.0 0.0 0.0 0.112676 0.0350877 0.0895522 0.0337079 0.382979 2851 2853 chr8 46739889 46746029 chr8:46739889-46746029:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.709716 0.0150943 0.381264 0.337983 0.0281008 0.104167 0.0113422 0.738602 0.403101 0.360179 0.0518807 0.666667 2852 2854 chr8 46752144 46758255 chr8:46752144-46758255:-:L1PA4:REF 1 - L1PA4 REF full-length MRC5 0.925 2853 2855 chr8 46942165 46945385 chr8:46942165-46945385:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.707973 0.293732 0.467931 0.561654 0.44544 0.505547 0.0141643 0.866473 0.781071 0.612416 0.721414 0.432081 2854 2856 chr8 47018708 47024752 chr8:47018708-47024752:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.566631 0.562547 0.584628 0.618574 0.445669 0.392754 0.0252781 0.928571 0.886628 0.573913 0.857451 0.822222 2855 2857 chr8 47075514 47080484 chr8:47075514-47080484:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.888889 0.918093 0.794783 0.775763 0.656944 0.773171 0.14881 0.830735 0.955556 0.838596 0.894837 0.92545 2856 2858 chr8 47095089 47100980 chr8:47095089-47100980:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.864618 0.321056 0.592361 0.658088 0.49469 0.51715 0.175439 0.0160256 0.964873 0.633508 0.851759 0.840753 2857 2859 chr8 47158290 47164269 chr8:47158290-47164269:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.925 0.714286 0.547368 0.710714 0.745614 0.816667 0.909091 0.918182 0.714286 0.88 0.885714 2858 2860 chr8 47316969 47323101 chr8:47316969-47323101:+:L1PA4:REF 12 + L1PA4 REF full-length SPIDR 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.948718 0.981997 0.979258 0.989829 0.962278 0.975845 0.982558 0.968123 0.97855 0.990654 0.976517 0.983083 2859 2861 chr8 47484871 47491006 chr8:47484871-47491006:+:L1PA5:REF 12 + L1PA5 REF full-length SPIDR 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.949657 0.979707 0.974865 0.978929 0.957447 0.981865 0.958333 0.973214 0.987055 0.980226 0.977867 0.985185 2860 2862 chr8 47500000 47505742 chr8:47500000-47505742:-:L1P1:REF 12 - L1P1 REF 3prime-truncated SPIDR 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.935056 0.981919 0.980769 0.981173 0.938991 0.984848 0.931964 0.97133 0.977236 0.988764 0.972347 0.969646 2861 2863 chr8 47758707 47760586 chr8:47758707-47760586:-:L1P3:REF 1 - L1P3 REF 3prime-truncated H1 0.0 2862 2864 chr8 48334021 48340013 chr8:48334021-48340013:-:L1PA4:REF 1 - L1PA4 REF full-length MRC5 0.431818 2863 2865 chr8 48793905 48799930 chr8:48793905-48799930:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.418301 0.537778 0.909839 0.931605 0.589975 0.893333 0.0109664 0.183333 0.96817 0.939583 0.88946 0.92378 2864 2866 chr8 49447907 49450580 chr8:49447907-49450580:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.877551 0.398964 0.51752 0.596083 0.287206 0.471074 0.0152091 0.961039 0.621622 0.559748 0.57362 0.916667 2865 2867 chr8 49875273 49881266 chr8:49875273-49881266:-:L1PA4:REF 6 - L1PA4 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,K562,HEK293 0.488095 0.615385 0.695971 0.27957 0.0 0.7109 2866 2868 chr8 50208779 50210669 chr8:50208779-50210669:+:L1PA5:REF 3 + L1PA5 REF 3prime-truncated SNTG1 MRC5,MCF7,HCT116 0.565657 0.381818 0.866667 2867 2869 chr8 50507917 50514060 chr8:50507917-50514060:-:L1PA4:REF 12 - L1PA4 REF full-length SNTG1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880306 0.347249 0.46987 0.450262 0.0688872 0.144011 0.00921659 0.511062 0.57699 0.52439 0.309813 0.903553 2868 2870 chr8 50687853 50693402 chr8:50687853-50693402:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated SNTG1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.786916 0.640878 0.786284 0.683728 0.378531 0.113379 0.0169851 0.16886 0.609626 0.70088 0.550669 0.913793 2869 2871 chr8 50777704 50783844 chr8:50777704-50783844:-:L1PA3:REF 12 - L1PA3 REF full-length SNTG1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.716117 0.63964 0.752597 0.753919 0.391642 0.644163 0.0113314 0.396684 0.653014 0.646281 0.635996 0.621528 2870 2872 chr8 52041342 52047484 chr8:52041342-52047484:-:L1PA4:REF 9 - L1PA4 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.603306 0.566667 0.716814 0.639175 0.609756 0.0 0.760417 0.553957 0.851064 2871 2873 chr8 52506484 52512618 chr8:52506484-52512618:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.791322 0.273768 0.461765 0.608414 0.567291 0.291866 0.00290276 0.700143 0.555851 0.56378 0.756286 0.90229 2872 2874 chr8 53106482 53112945 chr8:53106482-53112945:-:L1PA7:REF 1 - L1PA7 REF full-length MRC5 0.0 2873 2875 chr8 53337651 53343813 chr8:53337651-53343813:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895731 0.359259 0.640173 0.618626 0.346154 0.906646 0.00641026 0.895619 0.911681 0.669565 0.683932 0.915447 2874 2876 chr8 53780543 53786672 chr8:53780543-53786672:-:L1PA4:REF 12 - L1PA4 REF full-length ATP6V1H 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.964486 0.979381 0.983456 0.983264 0.973451 0.961905 0.969072 0.218919 0.989286 0.974895 0.974419 0.984375 2875 2877 chr8 54602020 54608161 chr8:54602020-54608161:-:L1PA4:REF 12 - L1PA4 REF full-length RP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.844203 0.0214286 0.512329 0.580227 0.0654762 0.0972222 0.0186916 0.385417 0.238095 0.579235 0.452599 0.875 2876 2878 chr8 54976590 54980667 chr8:54976590-54980667:+:L1PA7:REF 2 + L1PA7 REF 3prime-truncated MRC5,HEK293 0.0595238 0.0 2877 2879 chr8 55049901 55055999 chr8:55049901-55055999:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906383 0.152299 0.633282 0.649047 0.210721 0.206383 0.0102302 0.602326 0.680556 0.69697 0.45521 0.892473 2878 2880 chr8 55460494 55466644 chr8:55460494-55466644:+:L1PA4:REF 1 + L1PA4 REF full-length XKR4 MRC5 0.616279 2879 2881 chr8 55476428 55482556 chr8:55476428-55482556:+:L1PA4:REF 12 + L1PA4 REF full-length XKR4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.852804 0.588685 0.558659 0.488746 0.308612 0.170124 0.00203666 0.654237 0.58209 0.598513 0.681604 0.829268 2880 2882 chr8 56146152 56152289 chr8:56146152-56152289:-:L1PA5:REF 12 - L1PA5 REF full-length PLAG1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.810811 0.760684 0.833333 0.632249 0.768707 0.583333 0.00884956 0.458333 0.68323 0.877778 0.879195 0.861111 2881 2883 chr8 56249347 56249349 chr8:56249347-56249349:+:L1HS:NONREF 2 + L1HS KNR euL1db:mrip7913,1KGP:L1_umary_LINE1_1666,Philippe:EXP_ID_1369 HEK293T,HEK293 0.019802 0.940217 Helman_2013:1,Rodriguez-Martin_2020:14,Tubio_2014:1 2882 2884 chr8 56351203 56357347 chr8:56351203-56357347:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.758242 0.0333333 0.53 0.621495 0.0273973 0.537313 0.0 0.0483871 0.177083 0.52 0.723684 0.707317 2883 2885 chr8 56415221 56421252 chr8:56415221-56421252:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.707641 0.728972 0.686316 0.685215 0.569733 0.655263 0.0208768 0.598854 0.691099 0.743276 0.772959 0.812977 2884 2886 chr8 56937296 56938758 chr8:56937296-56938758:+:L1P2:REF 11 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.736842 0.0 0.264706 0.347561 0.0909091 0.0 0.0 0.03125 0.0 0.461538 0.518519 2885 2887 chr8 57158641 57164655 chr8:57158641-57164655:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868233 0.80543 0.805091 0.840204 0.824581 0.628571 0.0366492 0.919608 0.952537 0.818182 0.95098 0.944304 2886 2888 chr8 57320948 57327013 chr8:57320948-57327013:-:L1PA4:REF 2 - L1PA4 REF full-length MRC5,K562 0.824468 0.10101 2887 2889 chr8 58096475 58098988 chr8:58096475-58098988:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated FAM110B MRC5 0.204545 2888 2890 chr8 58370157 58376173 chr8:58370157-58376173:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.806202 0.677582 0.728261 0.735463 0.751407 0.378517 0.0192308 0.888081 0.909864 0.767068 0.881295 0.913884 2889 2891 chr8 58914690 58920717 chr8:58914690-58920717:+:L1PA2:REF 12 + L1PA2 REF full-length TOX 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.156447 0.841328 0.836427 0.868991 0.928184 0.920455 0.164029 0.726281 0.975579 0.87191 0.967344 0.501597 2890 2892 chr8 59168655 59174679 chr8:59168655-59174679:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0839695 0.839323 0.915309 0.964795 0.781385 0.966346 0.205556 0.864583 0.96875 0.946565 0.952736 0.965909 2891 2893 chr8 59456834 59462972 chr8:59456834-59462972:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.915584 0.785235 0.877193 0.925659 0.544828 0.0 0.104167 0.415385 0.983193 0.833333 0.884211 0.959596 2892 2894 chr8 59489149 59495555 chr8:59489149-59495555:-:L1PA7:REF 10 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.6 0.0 0.25 0.5375 0.0416667 0.2 0.0 0.0 0.263158 0.0327869 2893 2895 chr8 59869799 59875822 chr8:59869799-59875822:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.705043 0.53376 0.873806 0.86747 0.6586 0.888889 0.0225989 0.635135 0.976151 0.839204 0.795718 0.961145 2894 2896 chr8 59881856 59888008 chr8:59881856-59888008:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.866142 0.504854 0.683544 0.887048 0.366548 0.814815 0.117647 0.315217 0.976959 0.705882 0.680723 0.881356 2895 2897 chr8 60160362 60166517 chr8:60160362-60166517:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.833333 0.113924 0.365385 0.348485 0.391304 0.25641 0.742857 0.970588 0.363636 0.954545 1.0 2896 2898 chr8 60447769 60451735 chr8:60447769-60451735:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.9 0.372549 0.590909 0.514019 0.9 0.1 0.0526316 0.928571 0.925926 0.526316 0.75 0.909091 2897 2899 chr8 61115375 61121394 chr8:61115375-61121394:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0889764 0.865327 0.780138 0.812986 0.23506 0.674723 0.0898955 0.639734 0.964141 0.864315 0.958493 0.857143 2898 2900 chr8 61268015 61274014 chr8:61268015-61274014:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.124251 0.845745 0.839357 0.80371 0.552102 0.698864 0.166168 0.817391 0.942693 0.850163 0.766827 0.936937 2899 2901 chr8 61481244 61482722 chr8:61481244-61482722:+:L1PA5:REF 3 + L1PA5 REF 3prime-truncated CLVS1 HepG2,MRC5,HCT116 0.916667 0.758621 1.0 2900 2902 chr8 61844996 61851156 chr8:61844996-61851156:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.811881 0.206186 0.5 0.543624 0.378788 0.129187 0.122581 0.116667 0.946429 0.566038 0.791667 0.924528 2901 2903 chr8 61994302 62000000 chr8:61994302-62000000:+:L1PA3:REF 9 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,H1 0.932584 0.343137 0.564024 0.478992 0.982759 0.0 0.961783 0.804124 0.986667 2902 2904 chr8 62800633 62806816 chr8:62800633-62806816:+:L1PA3:REF 12 + L1PA3 REF full-length NKAIN3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.840934 0.0283019 0.634855 0.637723 0.477273 0.401079 0.0100897 0.391771 0.85654 0.710476 0.712657 0.920304 2903 2905 chr8 62975794 62979167 chr8:62975794-62979167:-:L1PA7:REF 9 - L1PA7 REF 3prime-truncated NKAIN3 2102Ep,HepG2,MRC5,HEK293T,K562,HCT116,IMR90,HEK293,H1 0.882353 0.25 0.193396 0.119048 0.0 0.27451 0.361702 0.255319 0.878049 2904 2906 chr8 63077186 63080439 chr8:63077186-63080439:+:L1PA6:REF 1 + L1PA6 REF 3prime-truncated TTPA MRC5 0.0 2905 2907 chr8 63484306 63490336 chr8:63484306-63490336:-:L1PA2:REF 12 - L1PA2 REF full-length LOC102724612 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0770378 0.785259 0.781081 0.775873 0.1329 0.681769 0.0242967 0.322222 0.854519 0.758845 0.890033 0.918091 2906 2908 chr8 63504768 63510892 chr8:63504768-63510892:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.854545 0.36875 0.453704 0.45875 0.319298 0.0978261 0.0 0.579592 0.534211 0.454054 0.588415 0.87 2907 2909 chr8 63797384 63803439 chr8:63797384-63803439:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.631222 0.803788 0.815358 0.792472 0.420755 0.788909 0.0336427 0.200288 0.875476 0.844406 0.828077 0.943128 2908 2910 chr8 64083677 64089809 chr8:64083677-64089809:+:L1PA6:REF 12 + L1PA6 REF full-length LINC01414 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.838596 0.286441 0.468835 0.466817 0.109792 0.0746269 0.0273973 0.0947867 0.427711 0.54386 0.299094 0.892308 2909 2911 chr8 64102228 64108366 chr8:64102228-64108366:+:L1PA4:REF 12 + L1PA4 REF full-length LINC01414 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883705 0.438202 0.669702 0.677911 0.414309 0.361352 0.0122655 0.049678 0.588889 0.589263 0.525149 0.914504 2910 2912 chr8 64240097 64246124 chr8:64240097-64246124:+:L1PA3:REF 12 + L1PA3 REF full-length LINC01414 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.059817 0.689586 0.753525 0.7819 0.184499 0.758523 0.0193966 0.0531062 0.800156 0.82048 0.792972 0.800554 2911 2913 chr8 66949103 66955119 chr8:66949103-66955119:-:L1PA2:REF 12 - L1PA2 REF full-length TCF24 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.205269 0.0497347 0.902622 0.940693 0.283418 0.498534 0.00589837 0.0190347 0.976208 0.922917 0.980872 0.927152 2912 2914 chr8 67589906 67596036 chr8:67589906-67596036:-:L1PA3:REF 12 - L1PA3 REF full-length CPA6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902718 0.937467 0.889703 0.933916 0.880998 0.73411 0.0460224 0.910931 0.969415 0.9 0.954307 0.974 2913 2915 chr8 67893943 67896101 chr8:67893943-67896101:+:L1PA4:REF 6 + L1PA4 REF 3prime-truncated 2102Ep,MRC5,HeLaS3,HCT116,IMR90,HEK293 0.833333 0.713568 0.0882353 0.75 0.589744 0.695122 2914 2916 chr8 68459800 68465948 chr8:68459800-68465948:+:L1PA3:REF 7 + L1PA3 REF full-length C8orf34 2102Ep,HepG2,BJ,MRC5,MCF7,HCT116,IMR90 0.775 0.222222 0.7625 0.767742 0.744186 0.664474 0.735632 2915 2917 chr8 68743353 68749398 chr8:68743353-68749398:+:L1PA3:REF 11 + L1PA3 REF full-length C8orf34 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.835556 0.670777 0.928527 0.942251 0.886885 0.662398 0.89414 0.835351 0.869148 0.924 0.858177 2916 2918 chr8 69019004 69021347 chr8:69019004-69021347:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated LINC01592 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889172 0.701493 0.940359 0.96707 0.930647 0.687646 0.0287687 0.973064 0.825262 0.978784 0.97819 0.95186 2917 2919 chr8 69254219 69260249 chr8:69254219-69260249:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.684443 0.835353 0.937665 0.923981 0.946117 0.778245 0.017481 0.983347 0.898859 0.882233 0.970368 0.964136 2918 2920 chr8 69351385 69357434 chr8:69351385-69357434:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.178862 0.304435 0.706767 0.725828 0.390041 0.444056 0.0956522 0.411141 0.713163 0.687023 0.477089 0.659004 2919 2921 chr8 69843300 69849423 chr8:69843300-69849423:+:L1PA5:REF 12 + L1PA5 REF full-length SLCO5A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902041 0.386779 0.803483 0.701629 0.780045 0.438202 0.00290698 0.823529 0.824934 0.777251 0.967078 0.957576 2920 2922 chr8 70723947 70724828 chr8:70723947-70724828:-:L1PA8:REF 12 - L1PA8 REF 3prime-truncated XKR9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.798077 0.246106 0.415094 0.308316 0.810526 0.0416667 0.00555556 0.926174 0.344444 0.477477 0.820225 0.814815 2921 2923 chr8 71393303 71399409 chr8:71393303-71399409:-:L1PA5:REF 1 - L1PA5 REF full-length EYA1 MRC5 0.379747 2922 2924 chr8 71406360 71412376 chr8:71406360-71412376:+:L1PA2:REF 12 + L1PA2 REF full-length EYA1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.252525 0.433447 0.775819 0.787056 0.319797 0.559748 0.00653595 0.592179 0.843091 0.739837 0.881789 0.921739 2923 2925 chr8 71451793 71457894 chr8:71451793-71457894:+:L1PA5:REF 12 + L1PA5 REF full-length EYA1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.888689 0.281321 0.776799 0.698824 0.86422 0.11068 0.0110236 0.341981 0.647399 0.664062 0.948624 0.889785 2924 2926 chr8 71486984 71486986 chr8:71486984-71486986:-:L1HS:NONREF 5 - L1HS KNR euL1db:mrip7964,1KGP:L1_umary_LINE1_1684,Philippe:EXP_ID_1382 EYA1 K562,MCF7,HCT116,IMR90,H1 0.0134228 0.947826 0.857904 0.887588 0.929245 2925 2927 chr8 71581618 71587762 chr8:71581618-71587762:+:L1PA5:REF 8 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,HEK293 0.769231 0.115385 0.375 0.517857 0.578947 0.0 0.341463 0.761905 2926 2928 chr8 72147447 72153464 chr8:72147447-72153464:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.257681 0.878191 0.908317 0.976296 0.917669 0.891602 0.590784 0.901271 0.911464 0.98044 0.956997 0.809695 2927 2929 chr8 72291053 72297285 chr8:72291053-72297285:+:L1PA5:REF 2 + L1PA5 REF full-length MRC5,HCT116 0.705882 0.78 2928 2930 chr8 72479440 72485463 chr8:72479440-72485463:+:L1PA2:REF 9 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293 0.113402 0.504386 0.811321 0.841918 0.0139535 0.0 0.863118 0.875862 0.926966 2929 2931 chr8 72712682 72718823 chr8:72712682-72718823:+:L1PA4:REF 12 + L1PA4 REF full-length KCNB2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.674528 0.0272727 0.315789 0.173626 0.582474 0.0163934 0.0386266 0.732026 0.196375 0.232558 0.868182 0.764228 2930 2932 chr8 72875538 72881588 chr8:72875538-72881588:-:L1HS:REF 6 - L1HS REF full-length KCNB2 MRC5,HEK293T,K562,MCF7,HCT116,HEK293 0.793994 0.950207 0.0116009 0.494505 0.969231 0.961303 Evrony_2012:1,Rodriguez-Martin_2020:32,Tubio_2014:5 2931 2933 chr8 73055509 73056094 chr8:73055509-73056094:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated TERF1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.926554 0.987805 0.975477 0.96649 0.977778 0.978261 0.954407 0.90228 0.980328 0.991837 0.961631 0.994709 2932 2934 chr8 73234866 73241084 chr8:73234866-73241084:-:L1PA6:REF 12 - L1PA6 REF full-length C8orf89 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.454183 0.228598 0.71374 0.729289 0.892169 0.45625 0.187961 0.429769 0.846766 0.789916 0.948005 0.886473 2933 2935 chr8 74015888 74022085 chr8:74015888-74022085:+:L1PA6:REF 12 + L1PA6 REF full-length LY96 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910714 0.628159 0.913265 0.779698 0.873239 0.271429 0.0189873 0.986301 0.958955 0.893805 0.598592 0.855769 2934 2936 chr8 74156205 74162644 chr8:74156205-74162644:+:L1PA7:REF 1 + L1PA7 REF full-length MRC5 0.972603 2935 2937 chr8 74396360 74402706 chr8:74396360-74402706:-:L1PA3:REF 12 - L1PA3 REF full-length GDAP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887441 0.782548 0.84589 0.72433 0.962403 0.435662 0.0264106 0.89955 0.977982 0.8561 0.967497 0.907787 2936 2938 chr8 74594235 74600252 chr8:74594235-74600252:-:L1PA3:REF 11 - L1PA3 REF full-length MIR2052HG 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.0772304 0.69209 0.953416 0.814484 0.0614618 0.603143 0.964194 0.976879 0.894895 0.903148 0.95114 2937 2939 chr8 74866519 74872545 chr8:74866519-74872545:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0414736 0.794721 0.842909 0.893097 0.847418 0.818463 0.0114504 0.929663 0.91818 0.878902 0.833871 0.899124 2938 2940 chr8 74942646 74948678 chr8:74942646-74948678:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.110585 0.826087 0.827516 0.822378 0.00643087 0.64916 0.00965018 0.893805 0.985271 0.83857 0.913632 0.918669 2939 2941 chr8 75202314 75208798 chr8:75202314-75208798:-:L1PA8:REF 6 - L1PA8 REF full-length 2102Ep,HepG2,BJ,MRC5,HCT116,HEK293 0.816667 0.0 0.3 0.261538 0.860759 0.348315 2940 2942 chr8 75278367 75284402 chr8:75278367-75284402:+:L1PA4:REF 12 + L1PA4 REF full-length CASC9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0547246 0.872055 0.79153 0.829364 0.478127 0.786264 0.0696828 0.916051 0.984431 0.850829 0.90361 0.940685 2941 2943 chr8 75324221 75330225 chr8:75324221-75330225:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0495595 0.463542 0.76839 0.787585 0.0125714 0.706134 0.0262664 0.570707 0.568182 0.800648 0.922545 0.352078 2942 2944 chr8 75356296 75359980 chr8:75356296-75359980:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.272727 0.677419 0.553191 0.463062 0.860063 0.17931 0.0238908 0.767857 0.854265 0.507795 0.792757 0.942177 2943 2945 chr8 75621331 75627355 chr8:75621331-75627355:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856597 0.603774 0.828283 0.864443 0.831874 0.623816 0.0104275 0.828092 0.979181 0.883838 0.841049 0.96788 2944 2946 chr8 75637977 75638256 chr8:75637977-75638256:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.775401 0.0210526 0.413793 0.423077 0.297297 0.116667 0.0 0.113043 0.987097 0.5 0.348148 0.84375 2945 2947 chr8 75872202 75876456 chr8:75872202-75876456:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.841202 0.0419397 0.498044 0.576886 0.662121 0.0586735 0.0042735 0.356215 0.966912 0.821429 0.561562 0.929607 2946 2948 chr8 76308116 76314119 chr8:76308116-76314119:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0647821 0.902478 0.648402 0.733801 0.109128 0.263158 0.0128499 0.247312 0.983174 0.883385 0.817167 0.899083 2947 2949 chr8 76896098 76902231 chr8:76896098-76902231:-:L1PA6:REF 1 - L1PA6 REF full-length MRC5 0.847458 2948 2950 chr8 77088411 77094444 chr8:77088411-77094444:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.156642 0.769231 0.887513 0.858424 0.963816 0.678605 0.0263523 0.810448 0.975894 0.902629 0.951484 0.94 2949 2951 chr8 77877777 77880624 chr8:77877777-77880624:-:L1P1:REF 9 - L1P1 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.314961 0.556452 0.504335 0.454023 0.188341 0.0106383 0.26087 0.598214 0.628319 2950 2952 chr8 77940513 77946526 chr8:77940513-77946526:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.139407 0.524089 0.714757 0.729946 0.267785 0.529706 0.019783 0.176019 0.908421 0.709124 0.513723 0.888989 2951 2953 chr8 78350507 78356689 chr8:78350507-78356689:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.694514 0.598094 0.762317 0.774862 0.198198 0.576271 0.00909918 0.244062 0.981868 0.752674 0.877043 0.952842 2952 2954 chr8 79982276 79988432 chr8:79982276-79988432:+:L1PA3:REF 10 + L1PA3 REF full-length MRPS28 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293,H1 0.92803 0.890995 0.991304 0.971483 0.770053 0.876623 0.939068 0.890909 0.945946 0.981818 2953 2955 chr8 80003520 80009422 chr8:80003520-80009422:+:L1PA5:REF 12 + L1PA5 REF full-length MRPS28 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.926874 0.97493 0.965398 0.954698 0.947047 0.971888 0.951768 0.945687 0.9658 0.977564 0.981328 0.970339 2954 2956 chr8 80952378 80952885 chr8:80952378-80952885:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.893258 0.434146 0.303665 0.272727 0.768041 0.0 0.0 0.923567 0.822115 0.308511 0.838323 0.897436 2955 2957 chr8 81325854 81331880 chr8:81325854-81331880:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91479 0.256139 0.89327 0.896791 0.873752 0.832083 0.0137881 0.795903 0.974702 0.914432 0.954868 0.964763 2956 2958 chr8 81427211 81433232 chr8:81427211-81433232:+:L1PA3:REF 12 + L1PA3 REF full-length PMP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.117264 0.594212 0.922136 0.909602 0.0827586 0.731806 0.0293132 0.806216 0.979224 0.875415 0.884133 0.878195 2957 2959 chr8 83447142 83453169 chr8:83447142-83453169:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.255444 0.848873 0.793123 0.841318 0.675232 0.800305 0.0147472 0.745862 0.958787 0.828452 0.827403 0.956704 2958 2960 chr8 83601728 83607573 chr8:83601728-83607573:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.2 2959 2961 chr8 83617303 83623455 chr8:83617303-83623455:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.716475 0.177966 0.204204 0.167979 0.0496454 0.348837 0.0185185 0.0509259 0.676923 0.516129 0.46831 0.875 2960 2962 chr8 84014870 84020865 chr8:84014870-84020865:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.371852 0.727707 0.698069 0.741058 0.489754 0.562823 0.010479 0.468197 0.903517 0.72071 0.620443 0.937656 2961 2963 chr8 84419545 84425573 chr8:84419545-84425573:-:L1PA2:REF 12 - L1PA2 REF full-length RALYL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.166085 0.842945 0.797826 0.826998 0.601399 0.665765 0.0139603 0.7213 0.923211 0.826087 0.840099 0.940822 2962 2964 chr8 84464142 84470166 chr8:84464142-84470166:-:L1PA2:REF 12 - L1PA2 REF full-length RALYL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.517098 0.763118 0.780571 0.659149 0.386937 0.704363 0.0126008 0.586563 0.948987 0.69669 0.773682 0.896789 2963 2965 chr8 84516386 84516388 chr8:84516386-84516388:+:L1HS:NONREF 2 + L1HS KNR euL1db:mrip8011,1KGP:L1_umary_LINE1_1702,Philippe:EXP_ID_1397 RALYL 2102Ep,MCF7 0.0580986 0.638691 2964 2966 chr8 84615570 84621623 chr8:84615570-84621623:-:L1PA3:REF 12 - L1PA3 REF full-length RALYL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.429851 0.61031 0.804634 0.777901 0.454674 0.465894 0.0130468 0.537975 0.923372 0.815138 0.784819 0.896764 2965 2967 chr8 86586338 86592366 chr8:86586338-86592366:-:L1PA3:REF 12 - L1PA3 REF full-length CNGB3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.325682 0.837349 0.844622 0.850709 0.880311 0.737705 0.0995907 0.940391 0.980877 0.842814 0.927333 0.93985 2966 2968 chr8 87223230 87229276 chr8:87223230-87229276:-:L1PA3:REF 11 - L1PA3 REF full-length CNBD1 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.554054 0.542373 0.721374 0.755994 0.561562 0.0143885 0.934924 0.961712 0.823077 0.672862 0.837134 2967 2969 chr8 87321803 87327829 chr8:87321803-87327829:-:L1PA2:REF 12 - L1PA2 REF full-length CNBD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.316895 0.5307 0.76763 0.725227 0.386811 0.728076 0.014629 0.925884 0.981025 0.711523 0.723825 0.864706 2968 2970 chr8 87624830 87630833 chr8:87624830-87630833:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.713496 0.601796 0.799119 0.657461 0.665198 0.658986 0.0264106 0.895146 0.9272 0.732334 0.852674 0.845511 2969 2971 chr8 88148848 88154880 chr8:88148848-88154880:+:L1PA2:REF 12 + L1PA2 REF full-length MMP16 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.208273 0.872402 0.978299 0.900147 0.916586 0.824729 0.0131129 0.874039 0.937695 0.943058 0.954474 0.964194 2970 2972 chr8 88574093 88580230 chr8:88574093-88580230:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.845395 0.130319 0.52349 0.300567 0.0305344 0.786127 0.00847458 0.553299 0.970976 0.419355 0.58427 0.907407 2971 2973 chr8 88685705 88691760 chr8:88685705-88691760:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.496839 0.81646 0.864836 0.844565 0.723523 0.950266 0.01321 0.889583 0.955746 0.841121 0.940639 0.979263 2972 2974 chr8 88854640 88860785 chr8:88854640-88860785:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.533144 0.392178 0.890443 0.828797 0.0557644 0.981611 0.0137091 0.718036 0.985575 0.794159 0.948125 0.939841 2973 2975 chr8 89162874 89166591 chr8:89162874-89166591:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90678 0.325499 0.877239 0.801684 0.462599 0.967538 0.0179687 0.691813 0.979582 0.748479 0.763863 0.961965 2974 2976 chr8 89218189 89224363 chr8:89218189-89224363:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883519 0.672961 0.927909 0.777045 0.464326 0.972644 0.0129108 0.739212 0.982906 0.885529 0.881522 0.961538 2975 2977 chr8 89373916 89380072 chr8:89373916-89380072:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.829659 0.457808 0.926484 0.778084 0.365731 0.962766 0.0379363 0.790085 0.982759 0.946667 0.919287 0.969565 2976 2978 chr8 89535240 89541269 chr8:89535240-89541269:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.143519 0.657059 0.863324 0.966803 0.304666 0.716724 0.00845666 0.54718 0.00614869 0.972917 0.425656 0.468672 2977 2979 chr8 90264106 90270252 chr8:90264106-90270252:+:L1PA4:REF 12 + L1PA4 REF full-length LINC00534 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890435 0.140827 0.528037 0.495798 0.5 0.701005 0.978992 0.832328 0.970226 0.526761 0.722222 0.925806 2978 2980 chr8 90393386 90399530 chr8:90393386-90399530:-:L1PA3:REF 12 - L1PA3 REF full-length LINC00534 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905445 0.59878 0.829948 0.867284 0.346778 0.328177 0.964509 0.0095991 0.969004 0.831014 0.857287 0.962736 2979 2981 chr8 91191844 91197868 chr8:91191844-91197868:-:L1PA3:REF 12 - L1PA3 REF full-length LRRC69 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0819672 0.962185 0.93322 0.949559 0.536881 0.850898 0.00518433 0.973315 0.986739 0.763496 0.319544 0.50358 2980 2982 chr8 91522091 91528121 chr8:91522091-91528121:-:L1HS:REF 11 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.453804 0.787268 0.936642 0.92831 0.878378 0.728175 0.0164127 0.957507 0.916534 0.907143 0.865854 2981 2983 chr8 91558668 91564687 chr8:91558668-91564687:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.257589 0.727053 0.91982 0.913537 0.769891 0.761905 0.0089141 0.911408 0.911253 0.836676 0.861498 0.94186 2982 2984 chr8 91787809 91793551 chr8:91787809-91793551:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.842105 0.267218 0.859621 0.805359 0.648699 0.255319 0.0 0.425249 0.432551 0.62963 0.343049 0.878788 2983 2985 chr8 91793551 91799568 chr8:91793551-91799568:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.352332 0.25 0.869898 0.781942 0.519288 0.434783 0.010989 0.714597 0.682573 0.627306 0.750789 0.934783 2984 2986 chr8 91869518 91875534 chr8:91869518-91875534:+:L1PA2:REF 8 + L1PA2 REF full-length HepG2,BJ,MRC5,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.523977 0.949527 0.884527 0.787456 0.945946 0.853166 0.851429 0.896245 2985 2987 chr8 91891362 91897361 chr8:91891362-91897361:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901961 0.574951 0.922139 0.902689 0.825215 0.357271 0.0113314 0.00947459 0.68621 0.79375 0.786177 0.943761 2986 2988 chr8 92364192 92370208 chr8:92364192-92370208:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.157646 0.86866 0.966908 0.950667 0.00531915 0.024637 0.970976 0.904731 0.952308 0.969202 0.888333 2987 2989 chr8 92381451 92386828 chr8:92381451-92386828:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.903472 0.167571 0.812236 0.903591 0.846557 0.136682 0.00648749 0.856925 0.47672 0.842607 0.835409 0.932584 2988 2990 chr8 93199695 93205863 chr8:93199695-93205863:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.842809 0.322176 0.573407 0.792754 0.729927 0.811688 0.015873 0.864935 0.446619 0.767442 0.809524 0.919708 2989 2991 chr8 93405812 93411825 chr8:93405812-93411825:+:L1PA2:REF 12 + L1PA2 REF full-length LINC00535 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.225467 0.838298 0.939547 0.980139 0.920151 0.779751 0.678623 0.90225 0.928672 0.9389 0.973378 0.950435 2990 2992 chr8 93774362 93780507 chr8:93774362-93780507:-:L1PA6:REF 12 - L1PA6 REF full-length TMEM67 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887931 0.983333 0.94 0.794118 0.960396 0.980392 0.580247 0.985075 0.951691 0.9 0.987261 0.929825 2991 2993 chr8 93952403 93953733 chr8:93952403-93953733:-:L1PA8:REF 3 - L1PA8 REF 3prime-truncated 2102Ep,MRC5,HCT116 0.848485 0.9375 0.444444 2992 2994 chr8 95371358 95375735 chr8:95371358-95375735:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated C8orf37-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.940068 0.837414 0.883542 0.91615 0.828502 0.865223 0.415657 0.982558 0.966998 0.941718 0.923923 0.956929 2993 2995 chr8 95552232 95558265 chr8:95552232-95558265:-:L1PA2:REF 11 - L1PA2 REF full-length C8orf37-AS1 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0649588 0.771046 0.913642 0.984263 0.595517 0.0848375 0.868917 0.854573 0.835578 0.881361 0.84932 2994 2996 chr8 95927889 95934039 chr8:95927889-95934039:-:L1PA6:REF 11 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.666667 0.107692 0.206897 0.482353 0.2 0.137931 0.128205 0.2 0.24359 0.257143 0.238095 2995 2997 chr8 96116677 96122698 chr8:96116677-96122698:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.134783 0.791602 0.949814 0.922009 0.872201 0.670968 0.920705 0.884587 0.974948 0.913349 0.878049 2996 2998 chr8 96738472 96744503 chr8:96738472-96744503:-:L1PA3:REF 12 - L1PA3 REF full-length CPQ 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.800454 0.872727 0.912752 0.924804 0.82874 0.510101 0.642512 0.762602 0.786392 0.887029 0.910112 0.956403 2997 2999 chr8 97039488 97045633 chr8:97039488-97045633:-:L1PA3:REF 8 - L1PA3 REF full-length CPQ 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116 0.944444 0.932961 0.925926 0.965066 0.849673 0.788889 0.75817 0.628205 2998 3000 chr8 97295603 97301657 chr8:97295603-97301657:+:L1PA2:REF 12 + L1PA2 REF full-length LOC101927066 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0893761 0.970118 0.96325 0.983134 0.906142 0.76677 0.376139 0.979785 0.870916 0.974227 0.978202 0.938433 2999 3001 chr8 97329196 97335596 chr8:97329196-97335596:-:L1PA7:REF 7 - L1PA7 REF full-length LOC101927066 HepG2,BJ,MRC5,HeLaS3,K562,HCT116,IMR90 0.735294 0.75 0.920792 0.0588235 0.0 0.240741 0.818182 3000 3002 chr8 97589585 97595726 chr8:97589585-97595726:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.669444 0.00747664 0.604577 0.81936 0.292612 0.00995851 0.292953 0.00694816 0.00642949 0.744813 0.762648 0.863636 3001 3003 chr8 98260275 98266293 chr8:98260275-98266293:+:L1PA2:REF 12 + L1PA2 REF full-length NIPAL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.226712 0.975194 0.983412 0.974233 0.95858 0.851085 0.678914 0.0361152 0.982185 0.960407 0.965686 0.909348 3002 3004 chr8 98584097 98590122 chr8:98584097-98590122:-:L1PA3:REF 12 - L1PA3 REF full-length STK3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871742 0.974499 0.944206 0.984232 0.963816 0.984106 0.977599 0.970961 0.930579 0.977515 0.977597 0.966011 3003 3005 chr8 98614445 98620471 chr8:98614445-98620471:+:L1PA2:REF 12 + L1PA2 REF full-length STK3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.282483 0.983569 0.97915 0.982574 0.976886 0.981013 0.957762 0.980547 0.986609 0.975355 0.967881 0.977948 3004 3006 chr8 98650350 98656495 chr8:98650350-98656495:+:L1PA3:REF 12 + L1PA3 REF full-length STK3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.916294 0.976856 0.914905 0.882192 0.95403 0.987725 0.966805 0.00667037 0.983698 0.772423 0.961438 0.97157 3005 3007 chr8 98694365 98700518 chr8:98694365-98700518:-:L1PA3:REF 12 - L1PA3 REF full-length STK3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.879566 0.968512 0.973978 0.974466 0.978196 0.963952 0.948886 0.933718 0.971237 0.929119 0.963743 0.970899 3006 3008 chr8 98710156 98716294 chr8:98710156-98716294:+:L1PA4:REF 12 + L1PA4 REF full-length STK3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.876011 0.972141 0.976048 0.961538 0.93 0.958716 0.837884 0.975949 0.97417 0.962441 0.965217 0.971888 3007 3009 chr8 98738605 98744745 chr8:98738605-98744745:+:L1PA3:REF 12 + L1PA3 REF full-length STK3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902004 0.975248 0.985028 0.981266 0.975398 0.98446 0.968363 0.903323 0.983471 0.981169 0.982768 0.985555 3008 3010 chr8 99063097 99065200 chr8:99063097-99065200:+:L1PA6:REF 1 + L1PA6 REF 3prime-truncated VPS13B MRC5 0.436959 3009 3011 chr8 99081430 99087603 chr8:99081430-99087603:-:L1PA4:REF 12 - L1PA4 REF full-length VPS13B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.7411 0.895984 0.89438 0.819776 0.80995 0.808511 0.814458 0.923585 0.821072 0.805486 0.81153 0.81875 3010 3012 chr8 99491203 99493001 chr8:99491203-99493001:-:L1P2:REF 12 - L1P2 REF 3prime-truncated VPS13B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.937984 0.993333 1.0 0.981366 0.974576 0.966667 0.959184 0.986395 0.972678 0.987805 0.994152 1.0 3011 3013 chr8 99738837 99744983 chr8:99738837-99744983:+:L1PA4:REF 12 + L1PA4 REF full-length VPS13B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921466 0.968807 0.975728 0.981022 0.902965 0.969112 0.924791 0.990868 0.970425 0.944444 0.97619 0.984043 3012 3014 chr8 99966928 99972752 chr8:99966928-99972752:+:L1PA8:REF 3 + L1PA8 REF 3prime-truncated RGS22 HepG2,MRC5,K562 0.0227273 0.170732 0.0 3013 3015 chr8 100852321 100858465 chr8:100852321-100858465:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.82679 0.850909 0.864307 0.951923 0.659686 0.805726 0.50365 0.374364 0.940235 0.826873 0.921811 0.851724 3014 3016 chr8 101425780 101431879 chr8:101425780-101431879:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.922705 0.461698 0.836634 0.712629 0.829787 0.660377 0.090625 0.958194 0.905882 0.72541 0.919481 0.948718 3015 3017 chr8 101671033 101677223 chr8:101671033-101677223:+:L1PA4:REF 12 + L1PA4 REF full-length GRHL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868421 0.450323 0.723554 0.657738 0.817014 0.437923 0.0309859 0.932084 0.816 0.695971 0.880916 0.903226 3016 3018 chr8 101678069 101684093 chr8:101678069-101684093:+:L1PA2:REF 12 + L1PA2 REF full-length NCALD 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.88974 0.821429 0.917685 0.862069 0.937996 0.861257 0.208427 0.98173 0.907417 0.86758 0.956621 0.94 3017 3019 chr8 101709980 101714714 chr8:101709980-101714714:+:L1PA7:REF 11 + L1PA7 REF 3prime-truncated NCALD 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.642857 0.0416667 0.526316 0.130682 0.964286 0.111111 0.166667 0.919355 0.683673 0.157895 0.881579 3018 3020 chr8 101891500 101897529 chr8:101891500-101897529:+:L1PA2:REF 12 + L1PA2 REF full-length NCALD 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.8 0.888788 0.917127 0.873864 0.729255 0.353339 0.241066 0.590515 0.890936 0.832051 0.946451 0.969402 3019 3021 chr8 102132755 102138891 chr8:102132755-102138891:+:L1PA3:REF 10 + L1PA3 REF full-length MIR5680 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293,H1 0.857143 0.644444 0.909091 0.837438 0.776371 0.734177 0.939394 0.968198 0.886076 0.932203 3020 3022 chr8 102316940 102323098 chr8:102316940-102323098:+:L1PA3:REF 12 + L1PA3 REF full-length UBR5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.96748 0.96371 0.956522 0.992076 0.982143 0.971154 0.9625 0.717742 0.996711 0.988095 0.988506 0.99375 3021 3023 chr8 103602996 103609018 chr8:103602996-103609018:-:L1PA2:REF 1 - L1PA2 REF full-length RIMS2 MRC5 0.736111 3022 3024 chr8 103951313 103957769 chr8:103951313-103957769:+:L1PA7:REF 1 + L1PA7 REF full-length RIMS2 MRC5 0.53125 3023 3025 chr8 104308596 104314727 chr8:104308596-104314727:+:L1PA6:REF 11 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.725275 0.284314 0.606742 0.602339 0.560345 0.0208333 0.0196078 0.653846 0.175325 0.510638 0.686567 3024 3026 chr8 104739851 104745873 chr8:104739851-104745873:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.354167 0.814991 0.969325 0.980094 0.911337 0.7125 0.793532 0.932698 0.886919 0.924437 0.941011 0.976808 3025 3027 chr8 104959062 104964830 chr8:104959062-104964830:-:L1HS:REF 2 - L1HS REF 3prime-truncated K562,IMR90 0.021097 0.956229 3026 3028 chr8 105789089 105795234 chr8:105789089-105795234:-:L1PA3:REF 11 - L1PA3 REF full-length ZFPM2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.764398 0.72381 0.705069 0.965116 0.889503 0.686957 0.842105 0.304582 0.879154 0.945055 0.932515 3027 3029 chr8 105954880 105955176 chr8:105954880-105955176:+:L1PA5:REF 2 + L1PA5 REF 3prime-truncated ZFPM2-AS1 MRC5,HCT116 0.894273 0.975904 3028 3030 chr8 106023328 106029434 chr8:106023328-106029434:+:L1PA5:REF 11 + L1PA5 REF full-length ZFPM2-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.790105 0.842177 0.768481 0.943471 0.955075 0.673993 0.681775 0.684049 0.981308 0.958075 0.965654 3029 3031 chr8 107240608 107246613 chr8:107240608-107246613:+:L1PA3:REF 12 + L1PA3 REF full-length ANGPT1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.118103 0.631324 0.956229 0.97221 0.754476 0.662267 0.9393 0.785008 0.858074 0.960682 0.925036 0.960209 3030 3032 chr8 107711966 107718092 chr8:107711966-107718092:-:L1PA3:REF 10 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293,H1 0.924528 0.728324 0.796296 0.958716 0.861842 0.0325203 0.72093 0.868852 0.944444 0.987952 3031 3033 chr8 108500299 108506445 chr8:108500299-108506445:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.943662 0.988636 0.980769 0.979651 0.954023 0.64557 0.241935 0.843902 0.92823 0.963636 0.990741 0.983051 3032 3034 chr8 108930482 108936587 chr8:108930482-108936587:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891482 0.755796 0.666667 0.750392 0.577566 0.582067 0.0161105 0.677064 0.984756 0.689888 0.700109 0.966469 3033 3035 chr8 109214406 109219470 chr8:109214406-109219470:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.805085 0.958333 0.977444 0.974293 0.868852 0.962963 0.954545 0.54491 0.968627 0.966667 0.959184 0.986842 3034 3036 chr8 109770927 109777095 chr8:109770927-109777095:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.781585 0.129103 0.333333 0.361502 0.103226 0.0648855 0.00892857 0.267206 0.971963 0.406863 0.550111 0.905085 3035 3037 chr8 109858630 109864778 chr8:109858630-109864778:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.881783 0.60408 0.646571 0.684814 0.365929 0.374715 0.0266075 0.575518 0.972718 0.679901 0.695652 0.944588 3036 3038 chr8 112594005 112600030 chr8:112594005-112600030:+:L1PA2:REF 5 + L1PA2 REF full-length CSMD3 HepG2,MRC5,MCF7,HCT116,IMR90 0.597403 0.529412 0.797203 0.959677 0.627273 3037 3039 chr8 113524588 113525313 chr8:113524588-113525313:-:L1PA3:REF 9 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,HEK293,H1 0.773333 0.457364 0.818182 0.858696 0.458874 0.921788 0.987654 0.721461 0.94 3038 3040 chr8 114000279 114006307 chr8:114000279-114006307:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.156542 0.782745 0.751579 0.793811 0.772559 0.911131 0.0128109 0.854575 0.979878 0.743902 0.83908 0.685322 3039 3041 chr8 114162725 114168762 chr8:114162725-114168762:+:L1PA3:REF 10 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293 0.855615 0.39527 0.739796 0.704403 0.256198 0.935065 0.0432099 0.420561 0.890578 0.401515 3040 3042 chr8 114504030 114510051 chr8:114504030-114510051:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0595727 0.715638 0.866833 0.861742 0.646379 0.355099 0.0236175 0.864279 0.986469 0.923398 0.849956 0.968421 3041 3043 chr8 114580378 114586371 chr8:114580378-114586371:-:L1PA8:REF 12 - L1PA8 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0588776 0.573511 0.767028 0.763577 0.583569 0.548931 0.00802752 0.731651 0.97822 0.764984 0.690613 0.880096 3042 3044 chr8 114631285 114637315 chr8:114631285-114637315:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.10847 0.320019 0.698866 0.716045 0.459445 0.522439 0.00875 0.0335066 0.981474 0.765152 0.695581 0.923008 3043 3045 chr8 115370380 115374484 chr8:115370380-115374484:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901515 0.330973 0.790598 0.84304 0.770642 0.105839 0.115132 0.888608 0.923372 0.829545 0.876513 0.967949 3044 3046 chr8 115753161 115759177 chr8:115753161-115759177:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.270846 0.684096 0.927007 0.966718 0.939326 0.736896 0.541359 0.983068 0.981069 0.873102 0.970858 0.97783 3045 3047 chr8 116326513 116332888 chr8:116326513-116332888:+:L1PA6:REF 12 + L1PA6 REF full-length LINC00536 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.862275 0.0365297 0.950355 0.847917 0.5 0.20339 0.0121951 0.969325 0.628692 0.98913 0.856354 0.926829 3046 3048 chr8 116410345 116416460 chr8:116410345-116416460:+:L1PA6:REF 11 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.9 0.420455 0.946429 0.731343 0.772727 0.430894 0.0380952 0.97 0.891304 0.966667 0.97 3047 3049 chr8 118548537 118554688 chr8:118548537-118554688:+:L1PA3:REF 12 + L1PA3 REF full-length SAMD12 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.147459 0.194794 0.934918 0.965835 0.689968 0.152111 0.0158311 0.00967982 0.581677 0.982211 0.97351 0.915663 3048 3050 chr8 118717723 118723853 chr8:118717723-118723853:-:L1PA3:REF 12 - L1PA3 REF full-length SAMD12-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.809959 0.22468 0.815909 0.795217 0.205907 0.530899 0.0120724 0.779773 0.646154 0.942901 0.833333 0.879884 3049 3051 chr8 119159398 119165410 chr8:119159398-119165410:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.117596 0.898995 0.880214 0.892458 0.748822 0.948003 0.0490421 0.966644 0.898012 0.938744 0.936035 0.928721 3050 3052 chr8 119233946 119239916 chr8:119233946-119239916:+:L1PA3:REF 12 + L1PA3 REF full-length MAL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.505747 0.882051 0.821261 0.861641 0.556838 0.89199 0.293987 0.815668 0.7875 0.849524 0.910586 0.814748 3051 3053 chr8 119292033 119298187 chr8:119292033-119298187:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910596 0.752636 0.773773 0.820542 0.566021 0.80437 0.0128023 0.906977 0.776552 0.81157 0.778454 0.939073 3052 3054 chr8 119456201 119462359 chr8:119456201-119462359:-:L1PA3:REF 8 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,HEK293 0.833333 0.438017 0.714286 0.624535 0.263158 0.285714 0.582192 0.643564 3053 3055 chr8 119521003 119527155 chr8:119521003-119527155:+:L1PA5:REF 1 + L1PA5 REF full-length MRC5 0.217391 3054 3056 chr8 120190619 120194194 chr8:120190619-120194194:-:L1PA3:REF 11 - L1PA3 REF 3prime-truncated COL14A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.936392 0.826326 0.899033 0.960207 0.934333 0.761905 0.0646732 0.905923 0.975084 0.95473 0.969803 3055 3057 chr8 120644161 120650187 chr8:120644161-120650187:-:L1PA2:REF 11 - L1PA2 REF full-length SNTB1 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.589109 0.98601 0.979208 0.982067 0.708029 0.0132626 0.942231 0.933094 0.974619 0.976253 0.985417 3056 3058 chr8 121050690 121056795 chr8:121050690-121056795:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.945946 0.582043 0.853116 0.94429 0.457627 0.361413 0.00902935 0.543452 0.976721 0.87037 0.871355 0.924603 3057 3059 chr8 121329878 121334807 chr8:121329878-121334807:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.318536 0.981744 0.96614 0.981372 0.408163 0.966232 0.0382696 0.974076 0.975158 0.988741 0.985075 0.94579 3058 3060 chr8 121417870 121424035 chr8:121417870-121424035:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.70437 0.862191 0.811748 0.759269 0.689842 0.807407 0.0346639 0.808905 0.842649 0.968085 0.857809 0.890845 3059 3061 chr8 122001270 122007235 chr8:122001270-122007235:+:L1PA6:REF 3 + L1PA6 REF full-length HepG2,HEK293T,K562 0.379747 0.145833 0.0 3060 3062 chr8 122244418 122250436 chr8:122244418-122250436:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0743427 0.339066 0.84928 0.964425 0.0989151 0.187905 0.0114192 0.00812065 0.220957 0.919481 0.93211 0.766529 3061 3063 chr8 123859986 123866007 chr8:123859986-123866007:-:L1PA2:REF 11 - L1PA2 REF full-length FER1L6 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0616016 0.820588 0.895277 0.86236 0.839798 0.658768 0.853333 0.885604 0.682081 0.892934 0.814607 3062 3064 chr8 125196203 125202353 chr8:125196203-125202353:-:L1PA6:REF 2 - L1PA6 REF full-length NSMCE2 MRC5,HCT116 0.972973 0.959459 3063 3065 chr8 125582886 125588889 chr8:125582886-125588889:+:L1HS:REF 1 + L1HS REF full-length HepG2 0.96509 Rodriguez-Martin_2020:1,Tubio_2014:1 3064 3066 chr8 126199419 126204425 chr8:126199419-126204425:+:L1PA3:REF 11 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.854103 0.495413 0.627376 0.726882 0.416901 0.351351 0.591716 0.975952 0.625 0.618644 0.913934 3065 3067 chr8 126313241 126319040 chr8:126313241-126319040:-:L1PA2:REF 12 - L1PA2 REF full-length LOC101927657 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.232156 0.841805 0.67802 0.722597 0.812882 0.820908 0.0500424 0.984387 0.901181 0.892241 0.974138 0.737775 3066 3068 chr8 126341585 126347597 chr8:126341585-126347597:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891076 0.634684 0.669436 0.730128 0.468795 0.755922 0.135371 0.0844944 0.950121 0.735558 0.860423 0.9388 3067 3069 chr8 126799617 126805646 chr8:126799617-126805646:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.109723 0.840297 0.834983 0.902405 0.559622 0.814748 0.0149701 0.706161 0.977257 0.879159 0.924419 0.897021 3068 3070 chr8 127311575 127315431 chr8:127311575-127315431:+:L1HS:REF 12 + L1HS REF 3prime-truncated CASC21 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.521758 0.92575 0.972667 0.981639 0.586296 0.83819 0.0279023 0.0732415 0.986772 0.926554 0.865652 0.883077 3069 3071 chr8 128714351 128720388 chr8:128714351-128720388:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.822542 0.757525 0.950131 0.955409 0.354167 0.505721 0.175459 0.830239 0.976091 0.939148 0.797227 0.945848 3070 3072 chr8 128744603 128750663 chr8:128744603-128750663:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.737755 0.969795 0.97877 0.884367 0.69346 0.840355 0.487067 0.652997 0.935386 0.906217 0.892801 0.936369 3071 3073 chr8 128759848 128765995 chr8:128759848-128765995:+:L1PA5:REF 11 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.937008 0.740223 0.917476 0.94564 0.44843 0.789474 0.297521 0.89858 0.909639 0.951613 0.839858 3072 3074 chr8 128801232 128807379 chr8:128801232-128807379:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.88271 0.736453 0.949572 0.925283 0.274641 0.434783 0.220779 0.78988 0.90472 0.955696 0.802667 0.957516 3073 3075 chr8 128891488 128897521 chr8:128891488-128897521:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.220054 0.869425 0.979706 0.974792 0.618834 0.372063 0.661642 0.933747 0.979256 0.958297 0.906109 0.97494 3074 3076 chr8 129152124 129158150 chr8:129152124-129158150:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.167183 0.771144 0.907895 0.88294 0.453804 0.582609 0.904167 0.711744 0.934343 0.876923 0.833333 3075 3077 chr8 129732686 129738821 chr8:129732686-129738821:+:L1PA6:REF 10 + L1PA6 REF full-length GSDMC 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293 0.895833 0.24359 0.947368 0.937063 0.254237 0.675 0.707317 1.0 0.742424 0.763158 3076 3078 chr8 131231615 131237785 chr8:131231615-131237785:-:L1PA4:REF 7 - L1PA4 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,HEK293 0.610465 0.614286 0.663516 0.0887097 0.171717 0.673575 0.562044 3077 3079 chr8 131250361 131256478 chr8:131250361-131256478:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.813278 0.0761548 0.28777 0.260086 0.0122511 0.0294118 0.0021692 0.199125 0.328049 0.225309 0.247104 0.789474 3078 3080 chr8 131262094 131265377 chr8:131262094-131265377:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891566 0.386792 0.601183 0.591017 0.225038 0.279446 0.0131086 0.567729 0.702468 0.708155 0.621622 0.933747 3079 3081 chr8 131635171 131641188 chr8:131635171-131641188:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.755471 0.752949 0.671318 0.701374 0.402109 0.343158 0.0164835 0.345214 0.809437 0.707143 0.791199 0.968978 3080 3082 chr8 131770949 131776926 chr8:131770949-131776926:+:L1PA2:REF 8 + L1PA2 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90 0.890909 0.817352 0.819149 0.56213 0.476471 0.610169 0.896667 0.775 3081 3083 chr8 134070756 134076773 chr8:134070756-134076773:-:L1HS:REF 8 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HEK293 0.208494 0.939937 0.820088 0.955882 0.532197 0.688581 0.966805 0.968689 Brouha_2003:89.4 Gardner_2017:2,Helman_2013:1,Rodriguez-Martin_2020:42,Tubio_2014:4 3082 3084 chr8 134667623 134672332 chr8:134667623-134672332:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated ZFAT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911523 0.845989 0.914055 0.964206 0.729839 0.905714 0.0574713 0.979738 0.972072 0.955078 0.951795 0.930185 3083 3085 chr8 135259101 135265130 chr8:135259101-135265130:+:L1PA2:REF 7 + L1PA2 REF full-length LINC01591 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7 0.0467706 0.848684 0.806701 0.536585 0.503497 0.0514541 0.196126 3084 3086 chr8 135335387 135341541 chr8:135335387-135341541:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.888889 0.304795 0.62226 0.613861 0.224109 0.381643 0.00340716 0.488927 0.676433 0.661818 0.755435 0.825784 3085 3087 chr8 135847335 135853524 chr8:135847335-135853524:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856452 0.632458 0.642978 0.528185 0.138018 0.116608 0.010989 0.315133 0.720327 0.594891 0.756 0.889381 3086 3088 chr8 135875862 135881890 chr8:135875862-135881890:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.359966 0.726437 0.794679 0.821596 0.603774 0.65103 0.0302288 0.479441 0.858754 0.823649 0.847134 0.891228 3087 3089 chr8 136190201 136196222 chr8:136190201-136196222:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.571429 0.752577 0.602041 0.685841 0.368159 0.403846 0.0 0.447368 0.5875 0.605263 0.717742 3088 3090 chr8 136438074 136444105 chr8:136438074-136444105:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.113053 0.629209 0.796413 0.752145 0.530249 0.73463 0.0303239 0.383781 0.867769 0.736253 0.744321 0.887897 3089 3091 chr8 137558584 137564612 chr8:137558584-137564612:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.78629 0.643811 0.838622 0.819672 0.480563 0.612378 0.0337711 0.549285 0.822733 0.840604 0.842832 0.95186 3090 3092 chr8 138042576 138048582 chr8:138042576-138048582:-:L1PA3:REF 12 - L1PA3 REF full-length LOC401478 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.813029 0.766559 0.715407 0.712278 0.491751 0.583127 0.0145985 0.290076 0.654967 0.718289 0.611 0.842561 3091 3093 chr8 138116165 138122224 chr8:138116165-138122224:+:L1PA2:REF 12 + L1PA2 REF full-length FAM135B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872595 0.390016 0.65971 0.794329 0.419806 0.648008 0.0101597 0.475572 0.847584 0.691505 0.652589 0.918733 3092 3094 chr8 138153318 138158990 chr8:138153318-138158990:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated FAM135B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896175 0.268555 0.464789 0.440814 0.0354957 0.190597 0.0102916 0.0866667 0.275338 0.514085 0.397226 0.845714 3093 3095 chr8 139163406 139166131 chr8:139163406-139166131:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated MRC5 0.0 3094 3096 chr8 142849960 142856074 chr8:142849960-142856074:+:L1PA6:REF 11 + L1PA6 REF full-length GML 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.65625 0.025 0.232143 0.334677 0.0140845 0.0 0.0 0.175926 0.179688 0.291667 0.204545 3095 3097 chr8 145013841 145019963 chr8:145013841-145019963:-:L1PA5:REF 12 - L1PA5 REF full-length ZNF252P-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.838462 0.67094 0.612121 0.647815 0.2375 0.198718 0.0740741 0.468085 0.512605 0.684211 0.38961 0.892857 3096 3098 chr9 139648 145712 chr9:139648-145712:+:L1PA3:REF 12 + L1PA3 REF full-length CBWD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918705 0.955619 0.98094 0.981045 0.918419 0.979042 0.957955 0.980108 0.979026 0.877168 0.923007 0.885993 3097 3099 chr9 229903 236050 chr9:229903-236050:-:L1PA4:REF 12 - L1PA4 REF full-length DOCK8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873239 0.825651 0.723906 0.662811 0.851042 0.340782 0.956604 0.970282 0.908175 0.675676 0.968056 0.920635 3098 3100 chr9 1185909 1187754 chr9:1185909-1187754:-:L1P1:REF 1 - L1P1 REF 3prime-truncated MRC5 0.5 3099 3101 chr9 1193067 1196260 chr9:1193067-1196260:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898693 0.817133 0.859922 0.716024 0.67619 0.109195 0.00638978 0.974874 0.590698 0.772727 0.948718 0.914692 3100 3102 chr9 1223881 1229900 chr9:1223881-1229900:+:L1PA2:REF 2 + L1PA2 REF full-length 2102Ep,MRC5 0.113095 0.55 3101 3103 chr9 1393108 1399515 chr9:1393108-1399515:+:L1PA8:REF 11 + L1PA8 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.5 0.0 0.3 0.48 0.217391 0.0555556 0.0 0.789474 0.0689655 0.222222 0.75 3102 3104 chr9 1423228 1424869 chr9:1423228-1424869:-:L1PA4:REF 11 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.759949 0.494168 0.710256 0.588591 0.183284 0.106164 0.00526316 0.892178 0.62116 0.892977 0.789809 3103 3105 chr9 1447164 1447166 chr9:1447164-1447166:+:L1HS:NONREF 1 + L1HS KNR Philippe:EXP_ID_1439 BJ 0.0750799 3104 3106 chr9 1558434 1564568 chr9:1558434-1564568:+:L1PA4:REF 1 + L1PA4 REF full-length MRC5 0.838983 3105 3107 chr9 1569017 1575045 chr9:1569017-1575045:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.698403 0.737261 0.825251 0.830656 0.784717 0.7585 0.032493 0.967057 0.839047 0.828964 0.930524 0.877378 3106 3108 chr9 1583448 1589502 chr9:1583448-1589502:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.849228 0.496176 0.557047 0.530135 0.367633 0.0757098 0.00208768 0.56203 0.484547 0.542986 0.681564 0.800955 3107 3109 chr9 1749540 1755665 chr9:1749540-1755665:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.735219 0.249748 0.602899 0.525373 0.162485 0.141732 0.00408163 0.550439 0.42772 0.529851 0.649416 0.729798 3108 3110 chr9 2898327 2900229 chr9:2898327-2900229:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.850494 0.772524 0.730179 0.699528 0.475448 0.315234 0.00902935 0.837407 0.882579 0.674817 0.752467 0.942446 3109 3111 chr9 4248929 4254064 chr9:4248929-4254064:-:L1PA7:REF 11 - L1PA7 REF 3prime-truncated GLIS3 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918033 0.982609 0.966805 0.909091 0.98913 0.0 0.868056 0.957983 0.992063 0.952381 0.957627 3110 3112 chr9 4605799 4611811 chr9:4605799-4611811:+:L1PA3:REF 12 + L1PA3 REF full-length SPATA6L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.13024 0.969536 0.966757 0.976703 0.116806 0.902128 0.80292 0.904523 0.976089 0.971599 0.979646 0.945626 3111 3113 chr9 4915073 4921190 chr9:4915073-4921190:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.88777 0.96347 0.868204 0.936306 0.892285 0.845161 0.960894 0.975 0.966011 0.770774 0.882353 0.952899 3112 3114 chr9 5152748 5153485 chr9:5152748-5153485:+:L1P3:REF 1 + L1P3 REF 3prime-truncated MRC5 0.581633 3113 3115 chr9 5471814 5477960 chr9:5471814-5477960:-:L1PA5:REF 11 - L1PA5 REF full-length CD274 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.896552 0.275862 0.927536 0.731092 0.916667 0.666667 0.768116 0.848485 0.965517 1.0 0.922222 3114 3116 chr9 5491417 5491419 chr9:5491417-5491419:+:L1HS:NONREF 6 + L1HS KNR euL1db:mrip8217,1KGP:L1_umary_LINE1_1781,Philippe:EXP_ID_1442 BJ,HEK293T,HeLaS3,HCT116,HEK293,H1 0.97967 0.944694 0.940199 0.976798 0.988796 0.96793 Rodriguez-Martin_2020:4 3115 3117 chr9 5681125 5684273 chr9:5681125-5684273:-:L1PA4:REF 2 - L1PA4 REF 3prime-truncated RIC1 HEK293T,HCT116 0.994048 0.978964 3116 3118 chr9 5779201 5782046 chr9:5779201-5782046:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated ERMP1 MRC5 0.989583 3117 3119 chr9 6058415 6063780 chr9:6058415-6063780:-:L1P2:REF 11 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.927602 0.0961538 0.654867 0.847619 0.595506 0.935484 0.87013 0.987179 0.69697 0.823529 0.988764 3118 3120 chr9 6135847 6141850 chr9:6135847-6141850:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.270565 0.88 0.848473 0.922141 0.932186 0.925157 0.340609 0.937319 0.968067 0.856606 0.945538 0.941954 3119 3121 chr9 6376264 6382430 chr9:6376264-6382430:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.84902 0.794173 0.885714 0.948183 0.734452 0.927948 0.0179283 0.837449 0.977654 0.882353 0.818287 0.917085 3120 3122 chr9 7216261 7217171 chr9:7216261-7217171:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.59383 0.0397878 0.616725 0.536212 0.345455 0.075 0.0169492 0.405882 0.490066 0.659722 0.35 0.658915 3121 3123 chr9 7277685 7283833 chr9:7277685-7283833:-:L1PA6:REF 11 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.889447 0.0946746 0.5 0.720879 0.386555 0.015625 0.0298507 0.323529 0.605263 0.386364 0.875 3122 3124 chr9 7712932 7719043 chr9:7712932-7719043:+:L1PA6:REF 11 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.777778 0.448718 0.649123 0.683761 0.419847 0.037037 0.533333 0.8125 0.697674 0.598131 0.956522 3123 3125 chr9 7741405 7741407 chr9:7741405-7741407:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip8227,1KGP:L1_umary_LINE1_1785,Philippe:EXP_ID_1444 MCF7 0.276952 3124 3126 chr9 8079466 8085615 chr9:8079466-8085615:-:L1PA6:REF 1 - L1PA6 REF full-length MRC5 0.186047 3125 3127 chr9 9931213 9937220 chr9:9931213-9937220:+:L1PA3:REF 12 + L1PA3 REF full-length PTPRD 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.339732 0.0172745 0.766667 0.787907 0.433151 0.623839 0.0151515 0.661209 0.84972 0.80137 0.793075 0.95311 3126 3128 chr9 10778293 10784424 chr9:10778293-10784424:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.874251 0.00408163 0.262295 0.212821 0.0159574 0.0240964 0.00961538 0.137255 0.139785 0.29 0.0642857 0.8125 3127 3129 chr9 12333994 12340033 chr9:12333994-12340033:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.126432 0.727823 0.725343 0.63905 0.065233 0.499051 0.0215054 0.0940351 0.737567 0.728972 0.778942 0.822881 3128 3130 chr9 13037883 13043909 chr9:13037883-13043909:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0629126 0.8521 0.868731 0.878049 0.942772 0.807878 0.00421644 0.9203 0.92799 0.89101 0.947605 0.811484 3129 3131 chr9 13791549 13794590 chr9:13791549-13794590:+:L1PA7:REF 5 + L1PA7 REF 3prime-truncated HepG2,MRC5,HeLaS3,HCT116,IMR90 0.135802 0.167513 0.0 0.04 0.735849 3130 3132 chr9 14663995 14670015 chr9:14663995-14670015:+:L1PA2:REF 12 + L1PA2 REF full-length ZDHHC21 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.105644 0.969944 0.973913 0.977971 0.962227 0.82716 0.765867 0.941994 0.978152 0.965323 0.967067 0.927147 3131 3133 chr9 14870656 14876831 chr9:14870656-14876831:-:L1PA3:REF 12 - L1PA3 REF full-length FREM1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.925865 0.906883 0.761307 0.671336 0.941973 0.379085 0.0357143 0.956204 0.857143 0.785714 0.906667 0.95977 3132 3134 chr9 14949423 14955872 chr9:14949423-14955872:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.874257 0.222938 0.549279 0.443114 0.873457 0.0151899 0.157428 0.923364 0.0953642 0.59743 0.835329 0.893072 3133 3135 chr9 15628037 15634187 chr9:15628037-15634187:+:L1PA3:REF 11 + L1PA3 REF full-length CCDC171 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.914191 0.953177 0.931034 0.952471 0.918848 0.0220588 0.935714 0.949791 0.826531 0.977778 0.947826 3134 3136 chr9 15644266 15650411 chr9:15644266-15650411:+:L1PA5:REF 11 + L1PA5 REF full-length CCDC171 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.903101 0.715938 0.870968 0.934277 0.854575 0.973282 0.00940439 0.93921 0.987382 0.83237 0.955665 3135 3137 chr9 16223083 16229454 chr9:16223083-16229454:+:L1PA7:REF 1 + L1PA7 REF full-length C9orf92 MRC5 0.462687 3136 3138 chr9 17210063 17216201 chr9:17210063-17216201:-:L1PA5:REF 12 - L1PA5 REF full-length CNTLN 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908946 0.626466 0.928934 0.953036 0.871056 0.890295 0.00947867 0.030303 0.589212 0.919192 0.837067 0.950464 3137 3139 chr9 17263044 17269181 chr9:17263044-17269181:-:L1PA4:REF 12 - L1PA4 REF full-length CNTLN 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.693816 0.357143 0.98481 0.935366 0.107932 0.978417 0.0113636 0.0596026 0.82582 0.975945 0.81401 0.782101 3138 3140 chr9 17539561 17545580 chr9:17539561-17545580:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909198 0.796423 0.82744 0.889865 0.886083 0.918033 0.010158 0.678457 0.819527 0.837121 0.916859 0.941497 3139 3141 chr9 18178012 18180251 chr9:18178012-18180251:+:L1PA3:REF 11 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.933566 0.65283 0.752187 0.801837 0.865979 0.628389 0.011658 0.776139 0.852941 0.891892 0.946667 3140 3142 chr9 18304911 18311360 chr9:18304911-18311360:+:L1PA7:REF 1 + L1PA7 REF full-length MRC5 0.276353 3141 3143 chr9 18560890 18560892 chr9:18560890-18560892:-:L1HS:NONREF 1 - L1HS KNR Philippe:EXP_ID_1455 ADAMTSL1 BJ 0.971487 3142 3144 chr9 18584294 18584296 chr9:18584294-18584296:+:L1HS:NONREF 2 + L1HS KNR euL1db:mrip8259,1KGP:L1_umary_LINE1_1799,Philippe:EXP_ID_1456 ADAMTSL1 HEK293T,HEK293 0.951574 0.932367 3143 3145 chr9 18644386 18650544 chr9:18644386-18650544:-:L1PA3:REF 12 - L1PA3 REF full-length ADAMTSL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873702 0.617756 0.957888 0.94207 0.812189 0.49584 0.00972053 0.222334 0.729901 0.896689 0.880546 0.908442 3144 3146 chr9 18711233 18717230 chr9:18711233-18717230:+:L1PA3:REF 12 + L1PA3 REF full-length ADAMTSL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873402 0.814095 0.975435 0.96448 0.961301 0.927724 0.0503796 0.0228374 0.909955 0.934569 0.962869 0.981499 3145 3147 chr9 18839036 18845184 chr9:18839036-18845184:-:L1PA3:REF 12 - L1PA3 REF full-length ADAMTSL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.843202 0.552281 0.868637 0.782799 0.869814 0.494624 0.00482315 0.929825 0.682065 0.957386 0.9375 0.948586 3146 3148 chr9 18962366 18968212 chr9:18962366-18968212:-:L1PA7:REF 11 - L1PA7 REF 3prime-truncated SAXO1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.810345 0.0714286 0.714286 0.735714 0.970588 0.136364 0.961538 0.761905 0.730769 0.944444 0.85 3147 3149 chr9 19536200 19542230 chr9:19536200-19542230:-:L1PA2:REF 12 - L1PA2 REF full-length SLC24A2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0993228 0.376678 0.820175 0.826797 0.859045 0.761261 0.108987 0.616208 0.868595 0.842756 0.902089 0.955801 3148 3150 chr9 19545936 19547088 chr9:19545936-19547088:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated SLC24A2 MRC5 0.545455 3149 3151 chr9 19833096 19837170 chr9:19833096-19837170:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.793388 0.130827 0.402174 0.349118 0.178497 0.118421 0.223926 0.198966 0.214286 0.373832 0.281469 0.825301 3150 3152 chr9 20655632 20658802 chr9:20655632-20658802:-:L1HS:REF 12 - L1HS REF 3prime-truncated FOCAD 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0706487 0.944411 0.626722 0.86069 0.00878477 0.101852 0.00433369 0.265403 0.0029873 0.419831 0.00851466 0.0431373 3151 3153 chr9 22348829 22354859 chr9:22348829-22354859:-:L1PA2:REF 10 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293,H1 0.0654958 0.67956 0.759845 0.805789 0.742857 0.903226 0.957719 0.946393 0.947935 0.949416 3152 3154 chr9 22502880 22509012 chr9:22502880-22509012:-:L1PA4:REF 10 - L1PA4 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.728309 0.709282 0.822581 0.403352 0.805243 0.718224 0.97075 0.781182 0.921788 0.976744 3153 3155 chr9 23105114 23111270 chr9:23105114-23111270:+:L1PA4:REF 11 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.883142 0.398957 0.531202 0.564336 0.0725126 0.0385965 0.458204 0.877737 0.696793 0.54224 0.946043 3154 3156 chr9 23247435 23249484 chr9:23247435-23249484:+:L1PA7:REF 11 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.789916 0.00355872 0.102941 0.116071 0.012987 0.0106383 0.0 0.375 0.255319 0.0185185 0.854167 3155 3157 chr9 23991702 23997834 chr9:23991702-23997834:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.75 3156 3158 chr9 24224676 24230670 chr9:24224676-24230670:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.367925 0.627311 0.755977 0.72763 0.506207 0.597039 0.621622 0.9837 0.783537 0.763494 0.9376 3157 3159 chr9 24387080 24391942 chr9:24387080-24391942:-:L1PA7:REF 11 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.784689 0.0217822 0.385965 0.360107 0.0241287 0.10989 0.0722222 0.975936 0.363158 0.346939 0.925 3158 3160 chr9 24408488 24412668 chr9:24408488-24412668:+:L1PA5:REF 1 + L1PA5 REF 3prime-truncated MRC5 0.0918919 3159 3161 chr9 24574536 24580564 chr9:24574536-24580564:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.191149 0.562749 0.70387 0.695002 0.591907 0.575714 0.654467 0.891213 0.627119 0.723869 0.725895 3160 3162 chr9 24638738 24644899 chr9:24638738-24644899:-:L1PA4:REF 5 - L1PA4 REF full-length 2102Ep,BJ,HEK293T,HCT116,HEK293 0.877095 0.657738 0.282051 0.962209 0.502793 3161 3163 chr9 25061389 25061796 chr9:25061389-25061796:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated MRC5 0.0666667 3162 3164 chr9 25070956 25076968 chr9:25070956-25076968:-:L1PA3:REF 9 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90 0.872 0.293706 0.666667 0.564433 0.105263 0.15 0.030303 0.957895 0.435897 3163 3165 chr9 26249770 26255795 chr9:26249770-26255795:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.832812 0.528922 0.832344 0.923644 0.395634 0.983645 0.199343 0.905395 0.958209 0.820312 0.933898 3164 3166 chr9 27220506 27226733 chr9:27220506-27226733:+:L1PA7:REF 11 + L1PA7 REF full-length TEK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.928571 0.0192308 0.25 0.911458 0.0714286 0.0714286 0.5 0.709302 0.88 0.483871 0.9 3165 3167 chr9 27322444 27325072 chr9:27322444-27325072:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated MOB3B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.915761 0.0613772 0.535645 0.47697 0.86 0.678967 0.985981 0.229091 0.75 0.50813 0.885835 0.946875 3166 3168 chr9 27690519 27696535 chr9:27690519-27696535:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0994587 0.958779 0.437643 0.814303 0.304491 0.824308 0.0993789 0.357451 0.969476 0.869416 0.963042 0.784773 3167 3169 chr9 28111895 28117865 chr9:28111895-28117865:-:L1HS:REF 8 - L1HS REF full-length LINGO2 2102Ep,MRC5,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.150594 0.810569 0.769841 0.0265152 0.981955 0.729483 0.220238 0.201365 3168 3170 chr9 28348134 28354162 chr9:28348134-28354162:+:L1PA2:REF 12 + L1PA2 REF full-length LINGO2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.560756 0.5 0.597374 0.504197 0.260483 0.52588 0.042471 0.044316 0.898969 0.665116 0.754717 0.843137 3169 3171 chr9 28989909 28996028 chr9:28989909-28996028:+:L1PA3:REF 10 + L1PA3 REF full-length LINGO2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293,H1 0.905046 0.628119 0.628299 0.662921 0.284389 0.964286 0.959152 0.691892 0.797521 0.962205 3170 3172 chr9 29450392 29451920 chr9:29450392-29451920:+:L1PA3:REF 11 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.0339693 0.834314 0.811876 0.809406 0.632075 0.887488 0.682224 0.97909 0.843854 0.919384 0.674442 3171 3173 chr9 30106864 30112891 chr9:30106864-30112891:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.879016 0.616292 0.636039 0.673389 0.390135 0.472594 0.413967 0.969201 0.690909 0.582037 0.939929 3172 3174 chr9 30539475 30545465 chr9:30539475-30545465:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.911656 0.739377 0.691304 0.724952 0.451202 0.521739 0.502632 0.934531 0.723214 0.82971 0.967153 3173 3175 chr9 31002347 31003432 chr9:31002347-31003432:-:L1P1:REF 11 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.708167 0.163859 0.424929 0.552256 0.0738866 0.210177 0.492308 0.909707 0.375979 0.417355 0.731061 3174 3176 chr9 31056094 31062222 chr9:31056094-31062222:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.8908 0.598004 0.629224 0.687191 0.213347 0.343931 0.807087 0.975585 0.69797 0.710997 0.963048 3175 3177 chr9 31224956 31230636 chr9:31224956-31230636:-:L1P1:REF 11 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.653199 0.16273 0.523333 0.526742 0.0690909 0.258333 0.666667 0.840426 0.639456 0.643836 0.638889 3176 3178 chr9 31294065 31300087 chr9:31294065-31300087:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.787115 0.582011 0.81362 0.741809 0.445693 0.666667 0.787037 0.89272 0.65873 0.784232 0.980328 3177 3179 chr9 31883172 31889274 chr9:31883172-31889274:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921488 0.976222 0.665037 0.669747 0.553219 0.865889 0.94246 0.621622 0.973343 0.746099 0.572942 0.927083 3178 3180 chr9 31932203 31938375 chr9:31932203-31938375:-:L1PA3:REF 8 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,IMR90,HEK293 0.864542 0.989247 0.694444 0.70073 0.555556 0.98008 0.597015 0.674157 3179 3181 chr9 32149073 32155113 chr9:32149073-32155113:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.787575 0.962756 0.855422 0.853301 0.753813 0.869048 0.251701 0.688 0.937947 0.837209 0.866906 0.872222 3180 3182 chr9 32225047 32231059 chr9:32225047-32231059:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887801 0.815727 0.63945 0.640722 0.409763 0.745223 0.0021322 0.759124 0.945594 0.62234 0.536258 0.921507 3181 3183 chr9 32710379 32716388 chr9:32710379-32716388:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919523 0.851604 0.806228 0.801511 0.779046 0.788066 0.052381 0.983893 0.945766 0.822785 0.937083 0.965458 3182 3184 chr9 32729016 32735047 chr9:32729016-32735047:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.772598 0.714286 0.665751 0.760449 0.636171 0.804896 0.127124 0.823832 0.788781 0.778204 0.79749 0.952521 3183 3185 chr9 34526550 34532701 chr9:34526550-34532701:-:L1PA5:REF 12 - L1PA5 REF full-length ENHO 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.874664 0.845752 0.785888 0.823746 0.821501 0.708589 0.0939716 0.92714 0.901941 0.785479 0.871833 0.965418 3184 3186 chr9 34761698 34767854 chr9:34761698-34767854:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.713208 0.920223 0.81565 0.883454 0.936491 0.99162 0.233051 0.931193 0.926696 0.870879 0.976871 0.86121 3185 3187 chr9 34845598 34851753 chr9:34845598-34851753:-:L1PA3:REF 12 - L1PA3 REF full-length FAM205BP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886519 0.672087 0.756826 0.807834 0.632241 0.962834 0.0135542 0.0209241 0.930715 0.73927 0.87349 0.936372 3186 3188 chr9 34878248 34884384 chr9:34878248-34884384:+:L1PA5:REF 1 + L1PA5 REF full-length FAM205C MRC5 0.378049 3187 3189 chr9 40915781 40921920 chr9:40915781-40921920:+:L1PA3:REF 12 + L1PA3 REF full-length MIR1299 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.669599 0.240461 0.447974 0.379594 0.111855 0.2432 0.0701001 0.158784 0.658491 0.412342 0.359069 0.635246 3188 3190 chr9 42437015 42438220 chr9:42437015-42438220:-:L1P3:REF 9 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293 0.814815 0.0384615 0.4375 0.533679 0.594595 0.0 0.76 0.326531 0.548387 3189 3191 chr9 62822443 62828465 chr9:62822443-62828465:-:L1PA6:REF 12 - L1PA6 REF full-length LOC100132249 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.779661 0.2 0.478261 0.333333 0.893617 0.361111 0.0 0.857143 0.833333 0.205128 0.777778 0.571429 3190 3192 chr9 63913382 63916426 chr9:63913382-63916426:+:L1HS:REF 11 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878307 0.52 0.628205 0.678161 0.371212 0.225352 0.694915 0.793296 0.625 0.9 0.787879 3191 3193 chr9 63979761 63985834 chr9:63979761-63985834:+:L1PA3:REF 4 + L1PA3 REF full-length HepG2,MRC5,HEK293T,HCT116 0.361111 0.678657 0.340314 0.823256 3192 3194 chr9 65709351 65715424 chr9:65709351-65715424:-:L1PA3:REF 11 - L1PA3 REF full-length CBWD5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.280702 0.923684 0.9375 0.937807 0.920771 0.884298 0.757143 0.816425 0.953125 0.867925 0.912195 3193 3195 chr9 68275326 68281363 chr9:68275326-68281363:-:L1PA3:REF 2 - L1PA3 REF full-length CBWD3 BJ,MRC5 0.916667 0.983333 3194 3196 chr9 68593275 68594616 chr9:68593275-68594616:-:L1PA7:REF 11 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.697183 0.414097 0.576271 0.528169 0.881944 0.154839 0.205128 0.693431 0.601942 0.90625 0.882883 3195 3197 chr9 69434794 69440931 chr9:69434794-69440931:-:L1PA4:REF 12 - L1PA4 REF full-length APBA1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.900735 0.756388 0.969444 0.978332 0.882692 0.545802 0.0125628 0.933566 0.856364 0.933086 0.967123 0.980159 3196 3198 chr9 69477107 69483129 chr9:69477107-69483129:+:L1PA2:REF 12 + L1PA2 REF full-length APBA1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.515251 0.924528 0.981308 0.845225 0.761576 0.765921 0.0180055 0.0318841 0.806225 0.888889 0.803011 0.937685 3197 3199 chr9 69506051 69512070 chr9:69506051-69512070:+:L1PA2:REF 12 + L1PA2 REF full-length APBA1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.614228 0.955499 0.977558 0.983155 0.778156 0.835423 0.0252855 0.0942761 0.935749 0.98398 0.97046 0.954644 3198 3200 chr9 70199056 70205081 chr9:70199056-70205081:-:L1PA2:REF 9 - L1PA2 REF full-length MAMDC2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293 0.107383 0.950311 0.863636 0.942857 0.284024 0.601942 0.944099 0.955556 0.984 3199 3201 chr9 70232212 70234017 chr9:70232212-70234017:+:L1P3:REF 12 + L1P3 REF 3prime-truncated SMC5-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.926667 0.97561 0.973856 0.74463 0.829545 0.3125 0.0895522 0.978261 0.964286 0.967742 0.911458 0.943038 3200 3202 chr9 70240311 70246471 chr9:70240311-70246471:+:L1PA6:REF 12 + L1PA6 REF full-length SMC5-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.849398 0.946667 0.824818 0.942748 0.878261 0.142857 0.117647 0.950495 0.956731 0.863636 0.929368 0.979167 3201 3203 chr9 72000000 72000629 chr9:72000000-72000629:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.941452 0.787185 0.935691 0.931964 0.894118 0.894198 0.0201005 0.962343 0.947589 0.870523 0.940618 0.933036 3202 3204 chr9 72072195 72076757 chr9:72072195-72076757:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.60274 0.144737 0.209059 0.314286 0.420382 0.833333 0.0 0.480769 0.662879 0.354839 0.394231 0.48 3203 3205 chr9 73782741 73789187 chr9:73782741-73789187:+:L1PA7:REF 1 + L1PA7 REF full-length MRC5 0.0 3204 3206 chr9 74424274 74430304 chr9:74424274-74430304:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0825279 0.808126 0.813273 0.898977 0.662239 0.0234637 0.761089 0.757831 0.749409 0.853639 0.940771 3205 3207 chr9 75340569 75346725 chr9:75340569-75346725:-:L1PA4:REF 6 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116 0.814815 0.336032 0.634783 0.545113 0.374302 0.806202 3206 3208 chr9 75474002 75474004 chr9:75474002-75474004:-:L1HS:NONREF 1 - L1HS KNR 1KGP:L1_umary_LINE1_1848,Philippe:EXP_ID_1489 BJ 0.819864 3207 3209 chr9 75701100 75707247 chr9:75701100-75707247:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889273 0.426602 0.123125 0.662211 0.390205 0.195274 0.0156627 0.436346 0.761905 0.601881 0.797267 0.843234 3208 3210 chr9 75762467 75763171 chr9:75762467-75763171:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.837209 0.358934 0.665254 0.638629 0.364389 0.243626 0.00719424 0.434 0.871795 0.7125 0.677632 0.902062 3209 3211 chr9 76670038 76676075 chr9:76670038-76676075:+:L1PA2:REF 1 + L1PA2 REF full-length PRUNE2 HeLaS3 0.666667 3210 3212 chr9 77408305 77411381 chr9:77408305-77411381:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated VPS13A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.922619 0.913288 0.972184 0.901578 0.966921 0.980392 0.971047 0.889717 0.980655 0.980501 0.942308 0.960145 3211 3213 chr9 77687672 77688390 chr9:77687672-77688390:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.839369 0.657261 0.895349 0.907018 0.83527 0.695324 0.299363 0.0592233 0.905959 0.864734 0.854015 0.952703 3212 3214 chr9 79097851 79103879 chr9:79097851-79103879:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.214644 0.619649 0.956897 0.957597 0.837889 0.87594 0.0247219 0.439142 0.95796 0.954345 0.909761 0.951872 3213 3215 chr9 79438972 79444977 chr9:79438972-79444977:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.372393 0.330895 0.804878 0.414988 0.698094 0.749171 0.0159236 0.905738 0.810212 0.592432 0.91339 0.393403 3214 3216 chr9 79500000 79500580 chr9:79500000-79500580:-:L1P1:REF 5 - L1P1 REF 3prime-truncated MRC5,HEK293T,MCF7,HCT116,IMR90 0.884527 0.928854 0.811594 0.793296 0.869231 3215 3217 chr9 80300144 80301724 chr9:80300144-80301724:-:L1P3:REF 8 - L1P3 REF 3prime-truncated 2102Ep,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293 0.755556 0.358974 0.269565 0.568182 0.0461538 0.0666667 0.464286 0.715328 3216 3218 chr9 80344878 80345776 chr9:80344878-80345776:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.74645 0.424077 0.472222 0.435577 0.593443 0.239496 0.00346021 0.717439 0.588889 0.680297 0.548323 0.722628 3217 3219 chr9 80654116 80660135 chr9:80654116-80660135:-:L1PA2:REF 5 - L1PA2 REF full-length 2102Ep,HepG2,MRC5,MCF7,HCT116 0.72 0.467626 0.86165 0.907895 0.746575 3218 3220 chr9 80741662 80747689 chr9:80741662-80747689:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.277837 0.723798 0.81008 0.949749 0.214203 0.624332 0.0101652 0.418928 0.881579 0.954403 0.847541 0.926587 3219 3221 chr9 81217155 81223297 chr9:81217155-81223297:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.915106 0.661637 0.789969 0.90867 0.883655 0.462641 0.00948992 0.725176 0.62234 0.9334 0.918489 0.976518 3220 3222 chr9 81432296 81438437 chr9:81432296-81438437:+:L1PA3:REF 2 + L1PA3 REF full-length BJ,MRC5 0.909091 0.955882 3221 3223 chr9 82751810 82757866 chr9:82751810-82757866:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.548793 0.559371 0.750373 0.675799 0.941201 0.650542 0.0116845 0.549839 0.859554 0.80974 0.937533 0.886228 3222 3224 chr9 82769371 82775374 chr9:82769371-82775374:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.759467 0.750852 0.7046 0.742404 0.136225 0.293729 0.0127932 0.533366 0.732526 0.813453 0.930703 0.950072 3223 3225 chr9 83049539 83055571 chr9:83049539-83055571:-:L1HS:REF 12 - L1HS REF full-length RASEF 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.245014 0.889291 0.925988 0.903392 0.986348 0.913265 0.0449346 0.969251 0.906337 0.938878 0.9873 0.92375 Rodriguez-Martin_2020:2,Tubio_2014:2 3224 3226 chr9 83222905 83228949 chr9:83222905-83228949:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.261733 0.923605 0.862069 0.745768 0.934265 0.784566 0.0527497 0.957094 0.784031 0.965315 0.772334 3225 3227 chr9 85071665 85077678 chr9:85071665-85077678:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.202922 0.768852 0.711624 0.472597 0.924029 0.695767 0.0499076 0.852857 0.858965 0.546089 0.963242 0.567308 3226 3228 chr9 85717679 85723818 chr9:85717679-85723818:-:L1PA6:REF 12 - L1PA6 REF full-length AGTPBP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.590778 0.975655 0.967172 0.929592 0.978723 0.971698 0.77619 0.972527 0.991342 0.952381 0.958824 0.875 3227 3229 chr9 86088457 86091219 chr9:86088457-86091219:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated GOLM1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.942029 0.615764 0.970149 0.956349 0.962457 0.816901 0.0 0.970588 0.979487 0.973913 0.949772 0.947826 3228 3230 chr9 86157088 86163107 chr9:86157088-86163107:+:L1PA2:REF 12 + L1PA2 REF full-length LOC101927623 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883779 0.915505 0.901614 0.906195 0.926033 0.770248 0.222453 0.61875 0.936806 0.890688 0.972803 0.915663 3229 3231 chr9 86377466 86383626 chr9:86377466-86383626:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.814521 0.315396 0.677083 0.620282 0.690449 0.144022 0.0156919 0.761733 0.911875 0.654696 0.698052 0.876842 3230 3232 chr9 86606053 86612054 chr9:86606053-86612054:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.641873 0.869826 0.961749 0.957069 0.824324 0.971649 0.204427 0.935945 0.915081 0.953704 0.977322 0.703466 3231 3233 chr9 87041882 87047900 chr9:87041882-87047900:+:L1PA3:REF 10 + L1PA3 REF full-length LOC440173 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.0294511 0.914286 0.956033 0.838261 0.00356013 0.959842 0.00866943 0.859912 0.946502 0.00519802 3232 3234 chr9 87276756 87276758 chr9:87276756-87276758:-:L1HS:NONREF 3 - L1HS KNR euL1db:mrip8412,1KGP:L1_umary_LINE1_1859,Philippe:EXP_ID_1497 HEK293T,HCT116,HEK293 0.884746 0.839489 0.924138 3233 3235 chr9 87902138 87908249 chr9:87902138-87908249:+:L1PA4:REF 12 + L1PA4 REF full-length LOC497256 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873134 0.56851 0.829787 0.872666 0.786611 0.684783 0.0668103 0.941463 0.847797 0.872576 0.862454 0.915493 3234 3236 chr9 88597321 88603641 chr9:88597321-88603641:+:L1PA6:REF 9 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.74359 0.47561 0.742857 0.960452 0.586207 0.981818 0.979381 0.808511 0.686747 3235 3237 chr9 90149604 90155634 chr9:90149604-90155634:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.167982 0.742586 0.708012 0.795059 0.859908 0.576427 0.0186092 0.949899 0.835266 0.7851 0.920216 0.92668 Brouha_2003:0.0 3236 3238 chr9 91225551 91231568 chr9:91225551-91231568:-:L1PA3:REF 9 - L1PA3 REF full-length AUH HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.986957 0.95 0.975207 0.964286 0.989899 0.949721 0.990826 0.990909 1.0 3237 3239 chr9 91477875 91480116 chr9:91477875-91480116:-:L1P3:REF 12 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911828 0.116883 0.759219 0.838418 0.773408 0.230769 0.0153061 0.844282 0.922897 0.854369 0.915167 0.945098 3238 3240 chr9 91654471 91654473 chr9:91654471-91654473:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip8420,1KGP:L1_umary_LINE1_1864,Philippe:EXP_ID_1499 MRC5 0.782571 Beck_2010:21.0 3239 3241 chr9 92082239 92088398 chr9:92082239-92088398:-:L1PA3:REF 12 - L1PA3 REF full-length SPTLC1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.958939 0.986301 0.981385 0.979965 0.973494 0.983034 0.965062 0.992276 0.985315 0.989848 0.987578 0.963522 3240 3242 chr9 92214408 92220428 chr9:92214408-92220428:+:L1PA3:REF 12 + L1PA3 REF full-length IARS 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.76631 0.977619 0.937286 0.92774 0.967894 0.987484 0.970268 0.972872 0.973735 0.969048 0.983092 0.818182 3241 3243 chr9 92900099 92906066 chr9:92900099-92906066:-:L1PA3:REF 9 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.594771 0.487437 0.687885 0.592814 0.605042 0.548611 0.949495 0.659091 0.791667 3242 3244 chr9 94020341 94026495 chr9:94020341-94026495:-:L1PA3:REF 12 - L1PA3 REF full-length PTPDC1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.802353 0.8984 0.735369 0.895405 0.843527 0.821036 0.570408 0.942063 0.896714 0.744863 0.885167 0.819026 3243 3245 chr9 94048052 94051360 chr9:94048052-94051360:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated PTPDC1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.867574 0.975435 0.961494 0.945355 0.917122 0.943005 0.472033 0.975477 0.98229 0.932432 0.897368 0.926027 3244 3246 chr9 94089082 94095103 chr9:94089082-94095103:-:L1PA2:REF 12 - L1PA2 REF full-length PTPDC1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.378736 0.978787 0.96974 0.958255 0.0619048 0.935946 0.8537 0.291925 0.98062 0.981481 0.965286 0.90839 3245 3247 chr9 94113535 94119565 chr9:94113535-94119565:-:L1HS:REF 12 - L1HS REF full-length PTPDC1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.207783 0.978861 0.97793 0.967331 0.962025 0.907071 0.941642 0.968735 0.986249 0.96146 0.970676 0.950052 3246 3248 chr9 95697585 95703604 chr9:95697585-95703604:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.468556 0.877748 0.83864 0.918211 0.894032 0.722293 0.0177384 0.928683 0.881018 0.898531 0.939592 0.886536 Brouha_2003:1.4 3247 3249 chr9 96797005 96803185 chr9:96797005-96803185:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.936396 0.994413 0.923636 0.98093 0.948649 0.973545 0.862637 0.980952 0.975439 0.92891 0.975 0.979381 3248 3250 chr9 97205143 97211302 chr9:97205143-97211302:+:L1PA3:REF 11 + L1PA3 REF full-length ANKRD18CP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.882022 0.650376 0.645161 0.667382 0.883333 0.778689 0.762295 0.891026 0.721649 0.866142 0.930556 3249 3251 chr9 97341376 97342313 chr9:97341376-97342313:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated SUGT1P4-STRA6LP-CCDC180 MRC5 0.790419 3250 3252 chr9 97580993 97587031 chr9:97580993-97587031:-:L1PA2:REF 12 - L1PA2 REF full-length TMOD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.537155 0.918508 0.930693 0.974124 0.934628 0.989237 0.969115 0.953158 0.969697 0.96291 0.967225 0.961755 3251 3253 chr9 98508277 98514399 chr9:98508277-98514399:+:L1PA3:REF 5 + L1PA3 REF full-length GABBR2 HepG2,MRC5,HEK293T,HCT116,HEK293 0.371901 0.716667 0.607692 0.758333 0.807339 3252 3254 chr9 99498741 99500000 chr9:99498741-99500000:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0862069 0.879111 0.875746 0.693396 0.934363 0.671493 0.144231 0.968114 0.973727 0.829268 0.930328 0.599291 3253 3255 chr9 100527228 100533251 chr9:100527228-100533251:+:L1PA2:REF 11 + L1PA2 REF full-length MSANTD3-TMEFF1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.411765 0.774194 0.88755 0.923875 0.937198 0.826087 0.0812183 0.847262 0.920705 0.971264 0.942748 3254 3256 chr9 100617095 100620060 chr9:100617095-100620060:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated MRC5 0.676471 3255 3257 chr9 100636584 100638426 chr9:100636584-100638426:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.729323 0.326923 0.36036 0.416667 0.420213 0.0392157 0.0177305 0.42517 0.456456 0.418605 0.679443 0.87069 3256 3258 chr9 100690713 100696743 chr9:100690713-100696743:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.750489 0.538519 0.67052 0.763238 0.719378 0.605691 0.00751174 0.28172 0.836098 0.619289 0.884935 0.860835 3257 3259 chr9 100745539 100749580 chr9:100745539-100749580:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.852848 0.0233766 0.457971 0.504699 0.139108 0.142157 0.00978474 0.179245 0.223022 0.542373 0.235727 0.843243 3258 3260 chr9 101102144 101108174 chr9:101102144-101108174:-:L1PA2:REF 11 - L1PA2 REF full-length PLPPR1 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.137596 0.963497 0.876455 0.748804 0.704473 0.00961538 0.870764 0.91006 0.825856 0.862105 0.919643 3259 3261 chr9 101290800 101296956 chr9:101290800-101296956:+:L1PA3:REF 12 + L1PA3 REF full-length PLPPR1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87281 0.963023 0.735406 0.74387 0.832022 0.457641 0.223692 0.711277 0.852802 0.751899 0.909643 0.909091 3260 3262 chr9 102064229 102067315 chr9:102064229-102067315:-:L1PA6:REF 10 - L1PA6 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.301105 0.452489 0.416667 0.111821 0.171123 0.0299401 0.176166 0.625 0.455357 0.401515 3261 3263 chr9 102147744 102153764 chr9:102147744-102153764:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.590066 0.453861 0.63729 0.663781 0.208683 0.591378 0.0733778 0.572351 0.927803 0.658747 0.465368 0.793275 3262 3264 chr9 102217909 102223924 chr9:102217909-102223924:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.105263 0.70942 0.509373 0.671233 0.007242 0.407555 0.0200321 0.284444 0.927616 0.630728 0.7676 0.83241 3263 3265 chr9 102337202 102343354 chr9:102337202-102343354:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.858934 0.75 0.58794 0.558524 0.296104 0.235088 0.0233918 0.276657 0.759162 0.704846 0.551971 0.887417 3264 3266 chr9 103237485 103241471 chr9:103237485-103241471:+:L1HS:REF 12 + L1HS REF 3prime-truncated LINC01492 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0885572 0.355982 0.784496 0.752181 0.453617 0.806268 0.0230863 0.799392 0.877778 0.844677 0.823457 0.878914 3265 3267 chr9 103606282 103612435 chr9:103606282-103612435:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.746812 0.230591 0.583248 0.494768 0.232648 0.482759 0.0265096 0.19084 0.841629 0.683258 0.340956 0.772036 3266 3268 chr9 104703167 104708881 chr9:104703167-104708881:+:L1P3:REF 1 + L1P3 REF 3prime-truncated OR13D1 MRC5 0.23913 3267 3269 chr9 105489506 105495647 chr9:105489506-105495647:-:L1PA3:REF 12 - L1PA3 REF full-length FSD1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.944928 0.973029 0.903991 0.980589 0.851891 0.990361 0.76392 0.554545 0.976257 0.984848 0.839335 0.977011 3268 3270 chr9 105515391 105519740 chr9:105515391-105519740:+:L1P2:REF 12 + L1P2 REF 3prime-truncated FSD1L 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.892857 0.954386 0.99537 0.976344 0.932584 0.954545 0.843882 0.948276 0.99005 0.980392 0.939394 0.957265 3269 3271 chr9 105563175 105569299 chr9:105563175-105569299:+:L1PA5:REF 12 + L1PA5 REF full-length FKTN 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.927046 0.981844 0.985866 0.983551 0.935294 0.980848 0.965858 0.97929 0.988543 0.98855 0.984416 0.976311 3270 3272 chr9 105576167 105582192 chr9:105576167-105582192:-:L1PA2:REF 12 - L1PA2 REF full-length FKTN 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.128378 0.974255 0.954902 0.975138 0.964724 0.905093 0.886161 0.969424 0.980322 0.956522 0.974806 0.898058 3271 3273 chr9 105785075 105791210 chr9:105785075-105791210:-:L1PA5:REF 12 - L1PA5 REF full-length TMEM38B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872955 0.810376 0.710403 0.822323 0.889126 0.854281 0.878515 0.847059 0.91213 0.690104 0.921 0.944969 3272 3274 chr9 106181588 106187641 chr9:106181588-106187641:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.768997 0.775701 0.824834 0.748634 0.668699 0.718644 0.00826446 0.957655 0.969582 0.801653 0.793939 0.973262 3273 3275 chr9 106809184 106815350 chr9:106809184-106815350:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.935484 0.0125 0.58 0.740458 0.100775 0.0238095 0.0 0.683168 0.772358 0.532258 0.515789 0.93617 3274 3276 chr9 108026592 108032734 chr9:108026592-108032734:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.854167 0.666105 0.954198 0.961698 0.926893 0.932749 0.353933 0.971989 0.957071 0.940476 0.934363 0.944 3275 3277 chr9 108501091 108507115 chr9:108501091-108507115:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.830562 0.823621 0.899658 0.966816 0.802012 0.794962 0.0209424 0.865173 0.960946 0.952998 0.864222 0.966483 3276 3278 chr9 108802688 108802690 chr9:108802688-108802690:+:L1HS:NONREF 3 + L1HS KNR euL1db:mrip8466,1KGP:L1_umary_LINE1_1881,Philippe:EXP_ID_1509 BJ,MCF7,IMR90 0.901541 0.970255 0.908915 Rodriguez-Martin_2020:13,Tubio_2014:1 3277 3279 chr9 109835393 109841527 chr9:109835393-109841527:+:L1PA5:REF 12 + L1PA5 REF full-length PALM2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.88685 0.740741 0.982558 0.931559 0.842932 0.440945 0.0178571 0.833333 0.9025 0.984733 0.955272 0.956835 3278 3280 chr9 110000010 110006173 chr9:110000010-110006173:-:L1PA4:REF 12 - L1PA4 REF full-length PALM2-AKAP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.605746 0.517408 0.953704 0.935886 0.767987 0.109685 0.0102975 0.400823 0.868061 0.964368 0.870404 0.935258 3279 3281 chr9 110229429 110235911 chr9:110229429-110235911:-:L1PA4:REF 12 - L1PA4 REF full-length TXN 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898824 0.90846 0.9642 0.980831 0.964151 0.870301 0.203091 0.95625 0.977778 0.978947 0.902597 0.9375 3280 3282 chr9 110417102 110423126 chr9:110417102-110423126:+:L1HS:REF 12 + L1HS REF full-length SVEP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0850809 0.9287 0.978043 0.97162 0.954237 0.853333 0.2 0.914747 0.975022 0.879552 0.969748 0.942703 3281 3283 chr9 110791097 110797129 chr9:110791097-110797129:+:L1HS:REF 12 + L1HS REF full-length MUSK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.356742 0.808612 0.984107 0.988032 0.957659 0.818855 0.026096 0.951361 0.978543 0.976562 0.976682 0.962241 3282 3284 chr9 112798107 112804159 chr9:112798107-112804159:-:L1HS:REF 12 - L1HS REF full-length SNX30 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.135025 0.967651 0.960728 0.968354 0.523619 0.974665 0.889302 0.552434 0.976282 0.977578 0.981511 0.907018 Rodriguez-Martin_2020:128,Tubio_2014:6 3283 3285 chr9 113437560 113443590 chr9:113437560-113443590:-:L1PA7:REF 11 - L1PA7 REF full-length RGS3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.38992 0.900901 0.94864 0.957064 0.952596 0.856604 0.684211 0.832192 0.964912 0.958763 0.94686 3284 3286 chr9 115958906 115962960 chr9:115958906-115962960:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923195 0.894869 0.902381 0.967403 0.237311 0.945098 0.00952381 0.405956 0.870677 0.946136 0.93254 0.972067 3285 3287 chr9 117066017 117072036 chr9:117066017-117072036:-:L1PA2:REF 12 - L1PA2 REF full-length ASTN2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.12884 0.769737 0.763211 0.733115 0.621502 0.789003 0.0402347 0.906487 0.708221 0.792366 0.920302 0.682927 3286 3288 chr9 118504546 118510677 chr9:118504546-118510677:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.85443 0.0439122 0.408776 0.439532 0.202586 0.800687 0.00309598 0.0760095 0.268409 0.47027 0.461326 0.823755 3287 3289 chr9 119169116 119175132 chr9:119169116-119175132:+:L1PA2:REF 12 + L1PA2 REF full-length BRINP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.224457 0.51565 0.543984 0.417699 0.59879 0.69171 0.0272045 0.570087 0.81646 0.523397 0.840278 0.564054 3288 3290 chr9 119621304 119627350 chr9:119621304-119627350:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.214852 0.731056 0.802653 0.762451 0.672263 0.694558 0.0208955 0.75416 0.896059 0.784232 0.82981 0.897921 3289 3291 chr9 120055235 120061264 chr9:120055235-120061264:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.278855 0.868575 0.818011 0.839258 0.783883 0.710501 0.0606335 0.826369 0.845018 0.786436 0.905512 0.884279 3290 3292 chr9 122408633 122414773 chr9:122408633-122414773:-:L1PA4:REF 11 - L1PA4 REF full-length 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923423 0.873373 0.91996 0.372255 0.603611 0.0417711 0.212564 0.888163 0.876129 0.752826 0.831193 3291 3293 chr9 122590144 122596170 chr9:122590144-122596170:-:L1PA3:REF 2 - L1PA3 REF full-length HepG2,HCT116 0.816327 0.952941 3292 3294 chr9 123903370 123909365 chr9:123903370-123909365:+:L1PA2:REF 12 + L1PA2 REF full-length DENND1A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.836968 0.980021 0.975785 0.963855 0.977401 0.975645 0.949802 0.977457 0.97047 0.954918 0.978564 0.963567 3293 3295 chr9 125010048 125016177 chr9:125010048-125016177:+:L1PA3:REF 12 + L1PA3 REF full-length SCAI 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.946634 0.947743 0.980048 0.981288 0.922255 0.948118 0.967474 0.976873 0.988959 0.98646 0.940693 0.87024 3294 3296 chr9 131342266 131345525 chr9:131342266-131345525:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.958071 0.772128 0.936813 0.966871 0.922907 0.962963 0.699708 0.953177 0.971576 0.956044 0.947802 0.977011 3295 3297 chr10 746011 746471 chr10:746011-746471:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.935433 0.77193 0.9117 0.797719 0.856397 0.82449 0.0822873 0.834808 0.968334 0.919512 0.944672 0.9503 3296 3298 chr10 1302016 1308092 chr10:1302016-1308092:+:L1PA2:REF 12 + L1PA2 REF full-length ADARB2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.776892 0.673091 0.77115 0.754116 0.674556 0.956236 0.0218341 0.86534 0.780195 0.786517 0.922912 0.926174 3297 3299 chr10 5109685 5110414 chr10:5109685-5110414:+:L1PA3:REF 9 + L1PA3 REF 3prime-truncated AKR1C3 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293 0.892045 1.0 0.575 0.801075 0.46875 0.691176 0.01875 0.948148 0.867647 3298 3300 chr10 5174970 5181139 chr10:5174970-5181139:-:L1PA3:REF 12 - L1PA3 REF full-length AKR1C8P 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856102 0.962857 0.572917 0.704599 0.452872 0.942693 0.558801 0.938983 0.868613 0.680597 0.810189 0.940541 3299 3301 chr10 5222679 5228851 chr10:5222679-5228851:+:L1PA3:REF 10 + L1PA3 REF full-length AKR1C4 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.889474 0.938776 0.831395 0.789954 0.633333 0.806667 0.922849 0.733333 0.927711 0.933333 3300 3302 chr10 5234497 5240880 chr10:5234497-5240880:+:L1PA7:REF 3 + L1PA7 REF full-length HepG2,MRC5,HCT116 0.863636 0.741935 0.769231 3301 3303 chr10 5245354 5251383 chr10:5245354-5251383:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.429942 0.981374 0.803262 0.881226 0.717846 0.868142 0.617424 0.976017 0.958256 0.830472 0.887348 0.940358 Brouha_2003:0.0 3302 3304 chr10 6369617 6375667 chr10:6369617-6375667:-:L1HS:REF 4 - L1HS REF full-length HeLaS3,K562,MCF7,H1 0.808696 0.104583 0.959379 0.932609 3303 3305 chr10 6804143 6810301 chr10:6804143-6810301:-:L1PA3:REF 12 - L1PA3 REF full-length LINC00707 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.92016 0.595855 0.824834 0.803229 0.85752 0.951754 0.004914 0.565327 0.526419 0.927461 0.94822 0.931818 3304 3306 chr10 9519878 9526029 chr10:9519878-9526029:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.926897 0.538318 0.664928 0.906958 0.789905 0.536082 0.014944 0.713154 0.977749 0.74359 0.803198 0.946176 3305 3307 chr10 10069374 10075458 chr10:10069374-10075458:-:L1PA4:REF 12 - L1PA4 REF full-length LINC02670 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.959184 0.694093 0.749296 0.962631 0.844221 0.444444 0.0116279 0.423221 0.965937 0.848039 0.90429 0.973118 3306 3308 chr10 10650857 10656884 chr10:10650857-10656884:+:L1PA2:REF 12 + L1PA2 REF full-length CELF2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.60828 0.83216 0.895683 0.96416 0.914373 0.81054 0.0183968 0.714951 0.984067 0.943955 0.938266 0.937021 3307 3309 chr10 11731436 11737465 chr10:11731436-11737465:-:L1PA2:REF 12 - L1PA2 REF full-length ECHDC3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.17743 0.488431 0.70869 0.883871 0.802755 0.370675 0.46474 0.851904 0.835971 0.753828 0.827416 0.391403 3308 3310 chr10 15915731 15921753 chr10:15915731-15921753:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0994126 0.863504 0.883333 0.918311 0.906608 0.873114 0.165448 0.912409 0.892283 0.898614 0.935224 0.97116 3309 3311 chr10 17717877 17722977 chr10:17717877-17722977:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated STAM 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.954972 0.981808 0.927076 0.987105 0.977812 0.976672 0.960902 0.912644 0.942161 0.97905 0.982871 0.965164 3310 3312 chr10 18030651 18036675 chr10:18030651-18036675:-:L1PA2:REF 12 - L1PA2 REF full-length SLC39A12 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.490962 0.613736 0.804375 0.734545 0.751793 0.855701 0.0094518 0.837416 0.808497 0.794492 0.769385 0.884558 3311 3313 chr10 18627418 18633448 chr10:18627418-18633448:+:L1PA3:REF 12 + L1PA3 REF full-length NSUN6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.293785 0.396907 0.0621118 0.192889 0.0198675 0.00704225 0.319149 0.0336538 0.980237 0.138889 0.102244 0.0939597 3312 3314 chr10 19088601 19094618 chr10:19088601-19094618:-:L1HS:REF 12 - L1HS REF full-length MALRD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.395437 0.767665 0.80543 0.874914 0.91556 0.746269 0.0143516 0.96537 0.830025 0.932566 0.881262 0.935933 Brouha_2003:0.0 Rodriguez-Martin_2020:0,Tubio_2014:1 3313 3315 chr10 19581231 19587252 chr10:19581231-19587252:-:L1PA3:REF 12 - L1PA3 REF full-length MALRD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911318 0.764957 0.832495 0.910668 0.903308 0.246154 0.0198511 0.024183 0.838922 0.928 0.866285 0.953317 3314 3316 chr10 20291416 20297572 chr10:20291416-20297572:-:L1PA4:REF 12 - L1PA4 REF full-length PLXDC2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.839124 0.301825 0.625 0.666071 0.445865 0.390052 0.00336134 0.582418 0.274265 0.740443 0.467245 0.933432 3315 3317 chr10 20459681 20465829 chr10:20459681-20465829:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908277 0.332108 0.730561 0.784599 0.801636 0.369748 0.00550964 0.867069 0.675627 0.848708 0.75914 0.95057 3316 3318 chr10 20525714 20531846 chr10:20525714-20531846:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.926874 0.447628 0.634241 0.705306 0.522727 0.238971 0.0056338 0.072549 0.769625 0.76569 0.592593 0.95 3317 3319 chr10 20555404 20561597 chr10:20555404-20561597:+:L1PA4:REF 10 + L1PA4 REF full-length MIR4675 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.819876 0.463054 0.730159 0.660929 0.723529 0.0 0.880342 0.759336 0.619403 0.783951 3318 3320 chr10 20751667 20757692 chr10:20751667-20757692:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.113899 0.777807 0.85695 0.860218 0.881047 0.662944 0.0292096 0.933017 0.918735 0.855838 0.867624 0.926893 3319 3321 chr10 20937453 20943602 chr10:20937453-20943602:+:L1PA4:REF 1 + L1PA4 REF full-length NEBL MRC5 0.465116 3320 3322 chr10 22060724 22066859 chr10:22060724-22066859:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.861111 0.326877 0.509025 0.615512 0.564784 0.821429 0.788 0.91623 0.765886 0.403361 0.420139 0.93 3321 3323 chr10 22074347 22080756 chr10:22074347-22080756:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.820652 0.15035 0.273913 0.264069 0.881757 0.319149 0.231959 0.962963 0.958333 0.3 0.900415 0.882812 3322 3324 chr10 22089277 22095453 chr10:22089277-22095453:+:L1PA6:REF 2 + L1PA6 REF full-length HepG2,MRC5 0.55814 0.804469 3323 3325 chr10 22123889 22129939 chr10:22123889-22129939:-:L1PA2:REF 6 - L1PA2 REF full-length 2102Ep,BJ,MRC5,HEK293T,IMR90,HEK293 0.19837 0.850254 0.85567 0.837838 0.871658 0.940171 3324 3326 chr10 22403137 22409152 chr10:22403137-22409152:-:L1PA3:REF 12 - L1PA3 REF full-length SPAG6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.787903 0.695538 0.875152 0.917984 0.961356 0.944528 0.953743 0.938753 0.985479 0.90012 0.977444 0.979275 3325 3327 chr10 22880664 22882940 chr10:22880664-22882940:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.784884 0.0505952 0.34322 0.551985 0.783883 0.0583942 0.208738 0.726562 0.730159 0.265432 0.844538 0.87069 3326 3328 chr10 23508105 23512073 chr10:23508105-23512073:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.852655 0.872582 0.828145 0.839582 0.787031 0.974801 0.5 0.958678 0.952663 0.786795 0.935943 0.941257 3327 3329 chr10 23589779 23595933 chr10:23589779-23595933:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902247 0.503165 0.690333 0.728678 0.541929 0.496437 0.0165837 0.709275 0.730795 0.792929 0.78921 0.927175 3328 3330 chr10 23666416 23672562 chr10:23666416-23672562:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.795635 0.67278 0.797376 0.697509 0.767204 0.775811 0.0152381 0.901961 0.74034 0.779487 0.832099 0.931889 3329 3331 chr10 23851013 23857162 chr10:23851013-23857162:-:L1PA3:REF 12 - L1PA3 REF full-length KIAA1217 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.737401 0.371599 0.638404 0.496955 0.574419 0.286567 0.00392157 0.747592 0.470443 0.561441 0.662957 0.804348 3330 3332 chr10 24094324 24095382 chr10:24094324-24095382:-:L1P1:REF 12 - L1P1 REF 3prime-truncated KIAA1217 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.860179 0.878976 0.722955 0.635089 0.8767 0.425641 0.029476 0.944615 0.747544 0.695745 0.960038 0.963287 3331 3333 chr10 25247314 25253340 chr10:25247314-25253340:-:L1PA2:REF 12 - L1PA2 REF full-length GPR158 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.124247 0.863001 0.854947 0.872362 0.906558 0.789855 0.0349968 0.954832 0.955747 0.836386 0.952191 0.949178 3332 3334 chr10 25418756 25418758 chr10:25418756-25418758:-:L1HS:NONREF 12 - L1HS KNR euL1db:mrip758,1KGP:L1_umary_LINE1_1934,Philippe:EXP_ID_0137 GPR158 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.118628 0.261925 0.663123 0.698862 0.530647 0.7875 0.00961538 0.939105 0.901247 0.731646 0.796421 0.677225 3333 3335 chr10 25515369 25521391 chr10:25515369-25521391:-:L1PA2:REF 12 - L1PA2 REF full-length GPR158 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.379676 0.727413 0.731735 0.652857 0.921429 0.702627 0.855176 0.848449 0.786395 0.780178 0.937428 0.971545 3334 3336 chr10 27299253 27305370 chr10:27299253-27305370:+:L1PA4:REF 12 + L1PA4 REF full-length ARMC4P1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.829431 0.587367 0.665276 0.733024 0.912534 0.797753 0.0328947 0.825581 0.84004 0.658462 0.937093 0.787293 3335 3337 chr10 27418271 27424390 chr10:27418271-27424390:+:L1PA4:REF 12 + L1PA4 REF full-length PTCHD3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871703 0.800794 0.770965 0.656769 0.857042 0.680251 0.0239006 0.958388 0.958961 0.791667 0.92961 0.952381 3336 3338 chr10 27899015 27903737 chr10:27899015-27903737:+:L1P3:REF 1 + L1P3 REF 3prime-truncated ARMC4 MRC5 0.169492 3337 3339 chr10 29334661 29335640 chr10:29334661-29335640:+:L1PA6:REF 8 + L1PA6 REF 3prime-truncated BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.644444 0.722222 0.741379 0.0 0.911111 0.686047 0.561404 0.708333 3338 3340 chr10 30947409 30948037 chr10:30947409-30948037:-:L1P1:REF 12 - L1P1 REF 3prime-truncated ZNF438 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.802326 0.872247 0.96036 0.976982 0.966292 0.942387 0.0071736 0.957364 0.986301 0.943662 0.958025 0.955414 3339 3341 chr10 31443412 31449437 chr10:31443412-31449437:-:L1PA2:REF 12 - L1PA2 REF full-length ZEB1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.185644 0.978512 0.985694 0.984957 0.980329 0.983539 0.694742 0.965103 0.987868 0.990091 0.977394 0.971139 3340 3342 chr10 31469210 31475223 chr10:31469210-31475223:+:L1PA3:REF 12 + L1PA3 REF full-length ZEB1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.946741 0.98374 0.984828 0.989647 0.971992 0.986019 0.928849 0.867916 0.983593 0.988756 0.978851 0.986025 3341 3343 chr10 32501066 32502512 chr10:32501066-32502512:-:L1P2:REF 12 - L1P2 REF 3prime-truncated CCDC7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.924138 0.363636 0.915584 0.823729 0.736842 0.964286 0.110169 0.957143 0.965517 0.765957 0.484127 0.873016 3342 3344 chr10 32558677 32564814 chr10:32558677-32564814:+:L1PA3:REF 12 + L1PA3 REF full-length CCDC7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.687943 0.902088 0.962677 0.968218 0.905039 0.894602 0.5563 0.269903 0.982961 0.917355 0.944812 0.976821 3343 3345 chr10 32699054 32705157 chr10:32699054-32705157:-:L1PA4:REF 12 - L1PA4 REF full-length CCDC7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.854145 0.659138 0.839815 0.854599 0.675313 0.704809 0.0103774 0.842579 0.837174 0.805861 0.726397 0.871951 3344 3346 chr10 32714106 32720586 chr10:32714106-32720586:+:L1PA7:REF 12 + L1PA7 REF full-length CCDC7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.892216 0.260982 0.777778 0.69352 0.441558 0.695652 0.0108108 0.91791 0.942708 0.786325 0.636792 0.787037 3345 3347 chr10 32754652 32760755 chr10:32754652-32760755:+:L1PA4:REF 9 + L1PA4 REF full-length CCDC7 HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293,H1 0.0293255 0.723238 0.583333 0.0623003 0.222222 0.00628931 0.559524 0.343173 0.880503 3346 3348 chr10 32912176 32918355 chr10:32912176-32918355:+:L1PA5:REF 1 + L1PA5 REF full-length ITGB1 MRC5 0.395556 3347 3349 chr10 33510845 33516876 chr10:33510845-33516876:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.352255 0.908265 0.952723 0.945866 0.957048 0.812401 0.0745712 0.979463 0.963057 0.956044 0.970081 0.866499 Brouha_2003:0.0 3348 3350 chr10 33690908 33696739 chr10:33690908-33696739:-:L1P3:REF 12 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911111 0.772727 0.767857 0.804511 0.830508 0.176471 0.0 1.0 0.931034 0.9375 0.916667 1.0 3349 3351 chr10 35473782 35479771 chr10:35473782-35479771:+:L1PA3:REF 12 + L1PA3 REF full-length CCNY 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.93183 0.98412 0.973339 0.985972 0.960497 0.97868 0.968237 0.979476 0.983059 0.939323 0.983795 0.981946 3350 3352 chr10 35858668 35864695 chr10:35858668-35864695:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.224806 0.336305 0.82921 0.849164 0.262313 0.909948 0.0139022 0.379419 0.818098 0.820355 0.794046 0.561629 3351 3353 chr10 36912319 36914176 chr10:36912319-36914176:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909574 0.0835655 0.457983 0.451724 0.237903 0.0 0.00763359 0.675926 0.206897 0.45977 0.292887 0.736111 3352 3354 chr10 37038753 37044909 chr10:37038753-37044909:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868387 0.447415 0.582741 0.632627 0.0937099 0.322967 0.0126582 0.625592 0.697548 0.477987 0.117085 0.828652 3353 3355 chr10 37044908 37050652 chr10:37044908-37050652:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.824444 0.0559085 0.501992 0.537087 0.165342 0.139738 0.00229358 0.897361 0.446154 0.498525 0.309665 0.754808 3354 3356 chr10 37137240 37139196 chr10:37137240-37139196:+:L1P1:REF 12 + L1P1 REF 3prime-truncated ANKRD30A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.848387 0.312601 0.576594 0.656749 0.345766 0.324385 0.0327456 0.705882 0.635429 0.633218 0.526369 0.79375 3355 3357 chr10 37537981 37544103 chr10:37537981-37544103:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.716495 0.100324 0.526549 0.504329 0.21 0.0933333 0.025641 0.570175 0.393939 0.644444 0.693396 0.535714 3356 3358 chr10 37765638 37771787 chr10:37765638-37771787:+:L1PA4:REF 12 + L1PA4 REF full-length ZNF248 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.821429 0.963993 0.481618 0.44375 0.311475 0.0549451 0.0049505 0.985185 0.934615 0.562914 0.558824 0.729167 3357 3359 chr10 37896970 37902988 chr10:37896970-37902988:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919167 0.780952 0.802374 0.810304 0.525635 0.740602 0.0531561 0.871083 0.889527 0.834483 0.752682 0.931883 3358 3360 chr10 37995443 38000000 chr10:37995443-38000000:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.804762 0.840508 0.851669 0.90305 0.931101 0.699336 0.559034 0.949527 0.957608 0.84918 0.917069 0.931361 3359 3361 chr10 38190899 38190901 chr10:38190899-38190901:+:L1HS:NONREF 1 + L1HS UNKNR LOC100129055 HEK293T 0.0267062 3360 3362 chr10 42140003 42146144 chr10:42140003-42146144:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.680578 0.246032 0.500688 0.452244 0.0598111 0.385042 0.0130293 0.439655 0.479319 0.612179 0.384746 0.734207 3361 3363 chr10 42526228 42532221 chr10:42526228-42532221:-:L1PA3:REF 10 - L1PA3 REF full-length ZNF37BP 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293,H1 0.970588 0.891304 0.985507 0.973684 0.92511 0.95614 0.952381 0.983516 0.991667 0.960784 3362 3364 chr10 42665128 42671301 chr10:42665128-42671301:+:L1PA4:REF 12 + L1PA4 REF full-length LINC01518 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.840183 0.00886263 0.536585 0.647168 0.325626 0.0779221 0.682927 0.482759 0.867725 0.623377 0.512438 0.861111 3363 3365 chr10 43716710 43722842 chr10:43716710-43722842:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.840567 0.658218 0.824312 0.817883 0.571549 0.29471 0.00337268 0.929716 0.645533 0.805153 0.813346 0.864662 3364 3366 chr10 43989778 43993191 chr10:43989778-43993191:-:L1P1:REF 12 - L1P1 REF 3prime-truncated LINC00841 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.860636 0.746939 0.845671 0.809524 0.747126 0.366541 0.0172414 0.8663 0.673913 0.863118 0.854725 0.902299 3365 3367 chr10 44106731 44112897 chr10:44106731-44112897:-:L1PA4:REF 10 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,HEK293,H1 0.577778 0.574359 0.886364 0.80292 0.456 0.231884 0.0176367 0.457143 0.84 0.89441 3366 3368 chr10 44137213 44138862 chr10:44137213-44138862:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.84359 0.391557 0.749042 0.468691 0.458256 0.0319149 0.0104167 0.832237 0.115063 0.710526 0.753223 0.877729 3367 3369 chr10 44268315 44274469 chr10:44268315-44274469:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.855814 0.902386 0.912911 0.840328 0.708999 0.432432 0.0111111 0.955947 0.712654 0.901993 0.920949 0.946144 3368 3370 chr10 45009173 45015196 chr10:45009173-45015196:-:L1PA3:REF 12 - L1PA3 REF full-length ZNF22 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.917795 0.711875 0.854376 0.899107 0.887798 0.526379 0.254613 0.857906 0.834739 0.904502 0.865004 0.957661 3369 3371 chr10 45250612 45251044 chr10:45250612-45251044:-:L1P1:REF 9 - L1P1 REF 3prime-truncated 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.908017 0.743506 0.64482 0.800292 0.23199 0.493569 0.811644 0.80137 0.91172 3370 3372 chr10 45362159 45368173 chr10:45362159-45368173:+:L1PA6:REF 12 + L1PA6 REF full-length ALOX5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.378491 0.517049 0.646628 0.70787 0.155603 0.653345 0.226183 0.00671551 0.838831 0.538538 0.639481 0.570652 3371 3373 chr10 50262408 50264886 chr10:50262408-50264886:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.79697 0.00954654 0.678516 0.729858 0.473958 0.158458 0.35706 0.746835 0.809524 0.756667 0.752525 0.798867 3372 3374 chr10 50782474 50788587 chr10:50782474-50788587:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.679862 0.357824 0.736779 0.8347 0.789725 0.179798 0.0072904 0.644828 0.961039 0.745182 0.829324 0.898601 3373 3375 chr10 51163398 51165747 chr10:51163398-51165747:+:L1P1:REF 12 + L1P1 REF 3prime-truncated PRKG1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898242 0.902593 0.9597 0.967788 0.964551 0.723537 0.0298426 0.930269 0.952197 0.936667 0.97 0.870588 3374 3376 chr10 51941454 51947615 chr10:51941454-51947615:-:L1PA3:REF 12 - L1PA3 REF full-length PRKG1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918879 0.738974 0.956081 0.977201 0.944681 0.483301 0.0121457 0.692833 0.897073 0.90583 0.928571 0.911504 3375 3377 chr10 52233328 52239334 chr10:52233328-52239334:+:L1PA2:REF 10 + L1PA2 REF full-length PRKG1 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.150911 0.590493 0.29496 0.0593505 0.352018 0.0112 0.00499093 0.0101078 0.219438 0.196915 3376 3378 chr10 52360195 52366339 chr10:52360195-52366339:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.813253 0.699422 0.883117 0.907692 0.656357 0.857988 0.862595 0.772 0.884615 0.845679 0.86747 3377 3379 chr10 52730355 52736527 chr10:52730355-52736527:-:L1PA3:REF 12 - L1PA3 REF full-length LOC105378305 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.899829 0.977964 0.908925 0.869986 0.914172 0.773407 0.0154997 0.0884503 0.930166 0.920219 0.928605 0.965517 3378 3380 chr10 52846400 52846769 chr10:52846400-52846769:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated MRC5 0.184549 3379 3381 chr10 53494006 53500000 chr10:53494006-53500000:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910112 0.527488 0.67963 0.683441 0.912409 0.69146 0.0360273 0.799035 0.963696 0.733467 0.880256 0.959596 3380 3382 chr10 55601875 55607910 chr10:55601875-55607910:+:L1PA3:REF 12 + L1PA3 REF full-length PCDH15 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0714563 0.108082 0.0292323 0.0737813 0.0078125 0.750733 0.00820026 0.0205859 0.978459 0.0325365 0.00861141 0.031265 3381 3383 chr10 55683076 55689092 chr10:55683076-55689092:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.912351 0.7343 0.684896 0.814593 0.927536 0.8125 0.0175439 0.769841 0.913706 0.692308 0.816327 0.839506 3382 3384 chr10 55899641 55905708 chr10:55899641-55905708:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0851761 0.693452 0.644372 0.777253 0.0573477 0.72164 0.0209732 0.770938 0.958574 0.775967 0.835106 0.207398 3383 3385 chr10 56442079 56448236 chr10:56442079-56448236:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.700342 0.351572 0.449118 0.481481 0.194134 0.230108 0.00849858 0.820312 0.913108 0.493056 0.240413 0.763736 3384 3386 chr10 56683821 56689958 chr10:56683821-56689958:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.754647 0.369231 0.390187 0.409854 0.147453 0.127049 0.015748 0.586777 0.698413 0.336493 0.274238 0.792035 3385 3387 chr10 58675839 58681636 chr10:58675839-58681636:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated BICC1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.9375 0.909091 0.975 0.964835 0.254545 0.333333 0.0 0.4 0.902222 0.97 0.956757 0.961905 3386 3388 chr10 59019528 59019530 chr10:59019528-59019530:+:L1HS:NONREF 1 + L1HS KNR Philippe:EXP_ID_0158 MRC5 0.925818 3387 3389 chr10 59037844 59043990 chr10:59037844-59043990:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889182 0.969849 0.668896 0.730514 0.234043 0.217604 0.0075188 0.243655 0.959633 0.746269 0.740219 0.930556 3388 3390 chr10 59207135 59207609 chr10:59207135-59207609:+:L1PA7:REF 6 + L1PA7 REF 3prime-truncated PHYHIPL 2102Ep,HepG2,MRC5,HEK293T,HCT116,HEK293 0.8125 1.0 0.333333 0.0714286 0.75 0.461538 3389 3391 chr10 59470127 59475776 chr10:59470127-59475776:+:L1PA7:REF 10 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.673684 0.253676 0.558376 0.644928 0.164557 0.0666667 0.010101 0.5 0.769231 0.706667 3390 3392 chr10 60692960 60698897 chr10:60692960-60698897:+:L1PA3:REF 11 + L1PA3 REF full-length ANK3 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.875829 0.369811 0.660878 0.787818 0.903597 0.0172414 0.359046 0.959927 0.78157 0.969775 0.937811 3391 3393 chr10 61002940 61009034 chr10:61002940-61009034:-:L1PA6:REF 12 - L1PA6 REF full-length RHOBTB1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87619 0.965385 0.832558 0.917526 0.826241 0.78125 0.287234 0.93662 0.921053 0.861111 0.915441 0.90678 3392 3394 chr10 62602750 62608755 chr10:62602750-62608755:-:L1PA2:REF 12 - L1PA2 REF full-length ZNF365 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.101887 0.495339 0.875217 0.957667 0.00990566 0.852538 0.0246809 0.864865 0.951652 0.922481 0.169662 0.550741 3393 3395 chr10 62672214 62678359 chr10:62672214-62678359:-:L1PA3:REF 12 - L1PA3 REF full-length ZNF365 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.594881 0.704072 0.747804 0.744376 0.58161 0.62845 0.0694802 0.720855 0.801632 0.723284 0.757062 0.783186 3394 3396 chr10 62782003 62785652 chr10:62782003-62785652:+:L1PA7:REF 3 + L1PA7 REF 3prime-truncated HepG2,MRC5,HCT116 0.384615 0.814815 0.888889 3395 3397 chr10 63944638 63950772 chr10:63944638-63950772:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911903 0.49967 0.746107 0.746842 0.65751 0.677454 0.00939986 0.906149 0.98003 0.706044 0.87963 0.956159 3396 3398 chr10 64015342 64021547 chr10:64015342-64021547:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.862613 0.75832 0.75188 0.696335 0.534271 0.643258 0.0112554 0.70088 0.982243 0.75188 0.709908 0.933086 3397 3399 chr10 64924285 64930261 chr10:64924285-64930261:+:L1PA3:REF 12 + L1PA3 REF full-length LINC02671 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.429126 0.490076 0.400901 0.703803 0.126174 0.442348 0.028481 0.735417 0.975326 0.554871 0.141575 0.457718 3398 3400 chr10 66436526 66439146 chr10:66436526-66439146:-:L1PA7:REF 10 - L1PA7 REF 3prime-truncated CTNNA3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.901961 0.212963 0.395833 0.362385 0.263158 0.025641 0.0333333 0.981481 0.424242 0.151515 3399 3401 chr10 66442673 66448861 chr10:66442673-66448861:+:L1PA4:REF 12 + L1PA4 REF full-length CTNNA3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.803728 0.572424 0.614575 0.63024 0.283983 0.224409 0.00591716 0.890909 0.966303 0.692035 0.55637 0.932787 3400 3402 chr10 66690979 66694606 chr10:66690979-66694606:+:L1P1:REF 12 + L1P1 REF 3prime-truncated CTNNA3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87191 0.632051 0.890675 0.842105 0.673835 0.549872 0.0203046 0.92219 0.921519 0.932735 0.907895 0.967033 3401 3403 chr10 67189566 67189568 chr10:67189566-67189568:+:L1HS:NONREF 4 + L1HS KNR euL1db:mrip873 CTNNA3 2102Ep,BJ,K562,H1 0.0142349 0.679916 0.0140845 0.831325 3402 3404 chr10 67230665 67236674 chr10:67230665-67236674:+:L1PA3:REF 12 + L1PA3 REF full-length CTNNA3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.142036 0.355691 0.291768 0.160873 0.191366 0.648061 0.0103413 0.111195 0.984938 0.275072 0.0956098 0.432997 3403 3405 chr10 67387044 67393069 chr10:67387044-67393069:+:L1PA3:REF 12 + L1PA3 REF full-length CTNNA3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0758725 0.158763 0.17342 0.0986079 0.0204212 0.738441 0.0224337 0.6723 0.986014 0.189744 0.397365 0.256098 3404 3406 chr10 67558505 67564644 chr10:67558505-67564644:+:L1PA5:REF 12 + L1PA5 REF full-length CTNNA3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891496 0.50754 0.815272 0.796985 0.78882 0.742424 0.0100733 0.934821 0.985992 0.89726 0.89699 0.968153 3405 3407 chr10 72435420 72441564 chr10:72435420-72441564:+:L1PA6:REF 7 + L1PA6 REF full-length MICU1 2102Ep,BJ,MRC5,HEK293T,K562,IMR90,HEK293 0.917431 0.980392 0.7625 0.910448 0.469388 0.912281 0.929412 3406 3408 chr10 73323334 73329500 chr10:73323334-73329500:+:L1PA3:REF 12 + L1PA3 REF full-length CFAP70 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.922179 0.808207 0.865089 0.902675 0.914397 0.934118 0.801001 0.935629 0.974318 0.885522 0.955763 0.892351 3407 3409 chr10 74216880 74223021 chr10:74216880-74223021:+:L1PA3:REF 12 + L1PA3 REF full-length ADK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.928 0.962099 0.959184 0.979355 0.953545 0.97551 0.983696 0.947674 0.985455 0.983193 0.978979 0.969466 3408 3410 chr10 74401400 74403861 chr10:74401400-74403861:-:L1P2:REF 8 - L1P2 REF 3prime-truncated ADK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HEK293 0.884211 0.954128 1.0 0.977778 0.962406 1.0 1.0 0.96 3409 3411 chr10 74571874 74574153 chr10:74571874-74574153:-:L1P1:REF 12 - L1P1 REF 3prime-truncated ADK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909006 0.974427 0.984701 0.97518 0.97752 0.9744 0.980556 0.970399 0.982759 0.977087 0.979148 0.974531 3410 3412 chr10 74603260 74609701 chr10:74603260-74609701:-:L1PA7:REF 1 - L1PA7 REF full-length ADK MRC5 0.615955 3411 3413 chr10 75515700 75521837 chr10:75515700-75521837:-:L1PA6:REF 1 - L1PA6 REF full-length LRMDA MRC5 0.238235 3412 3414 chr10 75558530 75564686 chr10:75558530-75564686:-:L1PA3:REF 12 - L1PA3 REF full-length LRMDA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.892546 0.98549 0.855702 0.905917 0.915144 0.896919 0.148576 0.96288 0.895695 0.833021 0.942457 0.967374 3413 3415 chr10 75575579 75581586 chr10:75575579-75581586:+:L1P2:REF 12 + L1P2 REF 3prime-truncated LRMDA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.947917 0.973684 0.338235 0.548507 0.617021 0.421053 0.0175439 0.757576 0.54321 0.351351 0.674419 0.861111 3414 3416 chr10 76142708 76148837 chr10:76142708-76148837:-:L1PA4:REF 12 - L1PA4 REF full-length LRMDA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.84662 0.973083 0.941909 0.865067 0.920255 0.39899 0.0112994 0.707071 0.741764 0.83299 0.877917 0.913758 3415 3417 chr10 76608512 76614828 chr10:76608512-76614828:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.848823 0.386034 0.699415 0.799363 0.280488 0.114754 0.00801282 0.337972 0.51715 0.815657 0.614634 0.905245 3416 3418 chr10 76846210 76852331 chr10:76846210-76852331:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.928767 0.468124 0.84994 0.93099 0.764509 0.318618 0.00665779 0.75 0.823358 0.890026 0.875616 0.947917 3417 3419 chr10 78088450 78094479 chr10:78088450-78094479:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.353398 0.806409 0.828851 0.76444 0.919744 0.631894 0.0759931 0.948254 0.941704 0.775542 0.970377 0.903382 3418 3420 chr10 78096087 78099309 chr10:78096087-78099309:+:L1PA7:REF 6 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HCT116,HEK293 0.666667 0.0555556 0.307692 0.117647 0.285714 0.368421 3419 3421 chr10 78676493 78682651 chr10:78676493-78682651:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.914286 0.884146 0.932914 0.900171 0.702866 0.576687 0.00582524 0.925676 0.887709 0.934211 0.90998 0.967626 3420 3422 chr10 79570393 79576489 chr10:79570393-79576489:+:L1PA6:REF 1 + L1PA6 REF full-length SFTPA2 MRC5 0.90625 3421 3423 chr10 79956165 79962310 chr10:79956165-79962310:+:L1PA4:REF 12 + L1PA4 REF full-length SFTPD 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873846 0.427948 0.635556 0.631579 0.470423 0.37594 0.0 0.850649 0.442623 0.614458 0.690763 0.773585 3422 3424 chr10 80304055 80309812 chr10:80304055-80309812:+:L1PA6:REF 2 + L1PA6 REF 3prime-truncated MRC5,HEK293T 0.332143 0.469136 3423 3425 chr10 80722509 80728544 chr10:80722509-80728544:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.81058 0.717807 0.731533 0.722458 0.651919 0.47079 0.225177 0.960707 0.80425 0.742998 0.773083 0.938907 3424 3426 chr10 80881468 80887604 chr10:80881468-80887604:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921652 0.245228 0.350725 0.456522 0.034689 0.0204545 0.00904977 0.966797 0.236196 0.570149 0.194662 0.703252 3425 3427 chr10 81441665 81441975 chr10:81441665-81441975:-:L1HS:REF 11 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.872464 0.714497 0.799556 0.734541 0.504127 0.663339 0.963482 0.873552 0.834027 0.800926 0.961376 3426 3428 chr10 81709615 81715642 chr10:81709615-81715642:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.75 0.731076 0.811828 0.766349 0.444258 0.513612 0.0104364 0.93722 0.853349 0.845098 0.790861 0.97074 3427 3429 chr10 82344062 82350086 chr10:82344062-82350086:-:L1PA2:REF 12 - L1PA2 REF full-length NRG3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.09355 0.889378 0.89829 0.816735 0.543226 0.81871 0.0477912 0.567235 0.877598 0.837163 0.958763 0.933194 3428 3430 chr10 83088894 83095334 chr10:83088894-83095334:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.644689 0.0186335 0.385666 0.242792 0.0263158 0.479042 0.00369004 0.958333 0.105919 0.412121 0.490909 0.692308 3429 3431 chr10 83294270 83294493 chr10:83294270-83294493:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.94382 0.147482 0.55102 0.508333 0.0288066 0.814516 0.0128205 0.352941 0.462963 0.59542 0.581281 0.871166 3430 3432 chr10 83741800 83747326 chr10:83741800-83747326:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.845238 0.0165746 0.219895 0.0763359 0.00480769 0.96063 0.00578035 0.822917 0.0350877 0.173077 0.121547 0.824074 3431 3433 chr10 83781056 83787087 chr10:83781056-83787087:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.138361 0.660529 0.811106 0.737874 0.60331 0.945428 0.0174738 0.949349 0.841775 0.812785 0.837145 0.898438 3432 3434 chr10 84279967 84286006 chr10:84279967-84286006:+:L1PA2:REF 12 + L1PA2 REF full-length LINC00858 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0524438 0.122357 0.793045 0.7747 0.00977488 0.848338 0.00612392 0.422175 0.720016 0.884576 0.907092 0.650824 3433 3435 chr10 84756878 84762878 chr10:84756878-84762878:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.273453 0.919098 0.831926 0.806436 0.486673 0.63089 0.0105566 0.688329 0.923895 0.801739 0.964187 0.928401 3434 3436 chr10 84773056 84779262 chr10:84773056-84779262:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.780624 0.655722 0.779221 0.757421 0.493392 0.749767 0.00990099 0.623932 0.935714 0.818069 0.860307 0.952252 3435 3437 chr10 84971957 84978109 chr10:84971957-84978109:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921569 0.020202 0.129032 0.162791 0.037037 0.0434783 0.0 0.0344828 0.0804598 0.175 0.0740741 0.925 3436 3438 chr10 85274403 85280845 chr10:85274403-85280845:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.71875 0.145 0.259036 0.0823529 0.0568182 0.0142857 0.0 0.892857 0.0529412 0.101124 0.508333 0.916667 3437 3439 chr10 85355506 85361538 chr10:85355506-85361538:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0739609 0.820408 0.801432 0.802198 0.679664 0.785039 0.0547804 0.439737 0.87361 0.826039 0.944121 0.904055 Rodriguez-Martin_2020:8 3438 3440 chr10 85500000 85505203 chr10:85500000-85505203:-:L1P2:REF 1 - L1P2 REF 3prime-truncated LINC01520 MRC5 0.0 3439 3441 chr10 85769340 85775490 chr10:85769340-85775490:+:L1PA3:REF 11 + L1PA3 REF full-length GRID1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.901274 0.50431 0.792852 0.778551 0.748311 0.571627 0.341849 0.957803 0.807692 0.956425 0.966019 3440 3442 chr10 85876618 85882780 chr10:85876618-85882780:+:L1PA4:REF 12 + L1PA4 REF full-length GRID1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.84204 0.614761 0.705155 0.669342 0.623517 0.483264 0.0161137 0.222689 0.960037 0.690476 0.848039 0.887728 3441 3443 chr10 88443339 88446691 chr10:88443339-88446691:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated RNLS 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.935673 0.431981 0.905618 0.94397 0.949045 0.963696 0.015949 0.840376 0.978947 0.930645 0.949731 0.94 3442 3444 chr10 88628462 88634738 chr10:88628462-88634738:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.881007 0.367435 0.859745 0.922998 0.847059 0.966667 0.00361011 0.730594 0.970526 0.9 0.945652 0.973333 3443 3445 chr10 89957874 89957877 chr10:89957874-89957877:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip938,1KGP:L1_umary_LINE1_1994,Philippe:EXP_ID_0167 LINC01375 HepG2,MRC5 0.745729 0.784985 Beck_2010:1.0 3444 3446 chr10 90011058 90012203 chr10:90011058-90012203:+:L1PA3:REF 9 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90 0.477876 0.532646 0.786325 0.88958 0.662722 0.526316 0.677215 0.984848 0.756522 3445 3447 chr10 90153450 90159478 chr10:90153450-90159478:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.810106 0.561636 0.893458 0.927826 0.719236 0.429299 0.00417101 0.869427 0.979433 0.715789 0.856129 0.920223 3446 3448 chr10 90250613 90256635 chr10:90250613-90256635:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.214037 0.6277 0.921526 0.939011 0.774471 0.651268 0.0286416 0.892831 0.9807 0.86615 0.952768 0.962649 3447 3449 chr10 90369650 90371954 chr10:90369650-90371954:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.884494 0.0178571 0.76748 0.947267 0.592932 0.0175439 0.016129 0.929825 0.983099 0.904891 0.942446 0.963483 3448 3450 chr10 91188085 91188342 chr10:91188085-91188342:+:L1P1:REF 12 + L1P1 REF 3prime-truncated PCGF5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909877 0.980803 0.972678 0.976314 0.957737 0.984069 0.89604 0.978261 0.979405 0.957359 0.972344 0.980469 3449 3451 chr10 91324304 91328005 chr10:91324304-91328005:-:L1P1:REF 12 - L1P1 REF 3prime-truncated HECTD2-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923632 0.812592 0.862599 0.90512 0.812558 0.730802 0.0872837 0.974566 0.974972 0.925067 0.928732 0.977011 3450 3452 chr10 91503263 91509287 chr10:91503263-91509287:+:L1PA2:REF 12 + L1PA2 REF full-length HECTD2-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.211859 0.972159 0.942949 0.984929 0.971205 0.965562 0.926731 0.967025 0.973995 0.979535 0.984169 0.966066 3451 3453 chr10 91643839 91650295 chr10:91643839-91650295:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.56621 0.0461538 0.896996 0.977528 0.468165 0.628 0.133663 0.102362 0.715686 0.891156 0.433198 0.777778 3452 3454 chr10 91749615 91755638 chr10:91749615-91755638:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.479257 0.690183 0.934512 0.978579 0.821022 0.657107 0.668698 0.0629053 0.982341 0.977941 0.970037 0.972795 3453 3455 chr10 93520973 93527095 chr10:93520973-93527095:+:L1PA4:REF 12 + L1PA4 REF full-length CEP55 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.96131 0.979063 0.987785 0.977068 0.970163 0.984756 0.969178 0.979034 0.992173 0.992081 0.981602 0.985577 3454 3456 chr10 93534981 93537186 chr10:93534981-93537186:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated CEP55 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909091 0.72381 0.862275 0.914894 0.913043 0.771186 0.113636 0.931034 0.965347 0.893939 0.954064 0.973333 3455 3457 chr10 94824660 94830681 chr10:94824660-94830681:-:L1PA2:REF 12 - L1PA2 REF full-length CYP2C19 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.606286 0.810259 0.627008 0.679126 0.525124 0.475592 0.0272572 0.622825 0.973013 0.601961 0.842616 0.84315 3456 3458 chr10 94895414 94899047 chr10:94895414-94899047:-:L1P1:REF 11 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.759494 0.770538 0.527163 0.0567766 0.0776942 0.018617 0.453237 0.952191 0.457778 0.249012 0.809756 3457 3459 chr10 95079215 95085109 chr10:95079215-95085109:+:L1PA3:REF 9 + L1PA3 REF full-length CYP2C8 2102Ep,HepG2,BJ,MRC5,HeLaS3,MCF7,HCT116,IMR90,H1 0.835784 0.906752 0.744966 0.78685 0.682274 0.236041 0.953153 0.822222 0.922581 3458 3460 chr10 95105272 95111424 chr10:95105272-95111424:-:L1PA6:REF 2 - L1PA6 REF full-length HepG2,HeLaS3 0.0 0.0 3459 3461 chr10 96180347 96186348 chr10:96180347-96186348:-:L1PA5:REF 1 - L1PA5 REF full-length ZNF518A MRC5 0.642857 3460 3462 chr10 98177040 98183177 chr10:98177040-98183177:-:L1PA6:REF 1 - L1PA6 REF full-length R3HCC1L MRC5 0.0 3461 3463 chr10 98541327 98544428 chr10:98541327-98544428:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated HPSE2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.553114 0.150798 0.746173 0.674742 0.493976 0.0418782 0.00749465 0.644654 0.30774 0.74168 0.745704 0.843416 3462 3464 chr10 98782941 98788971 chr10:98782941-98788971:-:L1HS:REF 12 - L1HS REF full-length HPSE2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.125868 0.855787 0.904745 0.878751 0.854344 0.759334 0.954796 0.949349 0.861778 0.900058 0.924204 0.875268 Brouha_2003:0.0 Gardner_2017:1 3463 3465 chr10 98937100 98943241 chr10:98937100-98943241:+:L1PA3:REF 3 + L1PA3 REF full-length HPSE2 HEK293T,HCT116,HEK293 0.698795 0.779221 0.761194 3464 3466 chr10 99099016 99105074 chr10:99099016-99105074:+:L1PA5:REF 11 + L1PA5 REF full-length HPSE2 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.832479 0.679361 0.779264 0.742114 0.346437 0.116525 0.823529 0.755952 0.792517 0.77728 0.895385 3465 3467 chr10 99152737 99158758 chr10:99152737-99158758:+:L1PA2:REF 12 + L1PA2 REF full-length HPSE2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.118273 0.853043 0.876777 0.879348 0.87138 0.674617 0.524324 0.967559 0.893099 0.887887 0.927946 0.933486 3466 3468 chr10 100406330 100412500 chr10:100406330-100412500:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898246 0.929368 0.840385 0.79976 0.937695 0.966667 0.481605 0.973913 0.971088 0.8625 0.973941 0.929577 3467 3469 chr10 104533677 104534377 chr10:104533677-104534377:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.819382 0.748038 0.800133 0.748038 0.574556 0.550821 0.0356919 0.847766 0.86318 0.810385 0.945285 0.94461 3468 3470 chr10 104719978 104726123 chr10:104719978-104726123:-:L1PA4:REF 12 - L1PA4 REF full-length SORCS3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.82048 0.429982 0.743079 0.730274 0.489501 0.511236 0.00310559 0.5 0.812604 0.729508 0.866492 0.968553 3469 3471 chr10 105377346 105383377 chr10:105377346-105383377:-:L1HS:REF 11 - L1HS REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.124733 0.876782 0.788499 0.595252 0.646766 0.0167818 0.145612 0.89011 0.842667 0.894231 0.918987 3470 3472 chr10 105477215 105481175 chr10:105477215-105481175:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.84456 0.499301 0.773879 0.733722 0.517241 0.430962 0.0280899 0.443636 0.870279 0.805085 0.805369 0.92766 3471 3473 chr10 105550203 105556235 chr10:105550203-105556235:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.669388 0.0877193 0.476119 0.408931 0.129784 0.172205 0.00626959 0.0542169 0.486903 0.528889 0.47166 0.901538 3472 3474 chr10 105735717 105741873 chr10:105735717-105741873:+:L1PA3:REF 12 + L1PA3 REF full-length LINC02627 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.859005 0.223467 0.613853 0.59776 0.217882 0.501767 0.0127737 0.218182 0.566094 0.729469 0.636364 0.945355 3473 3475 chr10 105775520 105781551 chr10:105775520-105781551:-:L1HS:REF 12 - L1HS REF full-length LINC02627 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.23622 0.808185 0.808438 0.815901 0.552632 0.581505 0.0200481 0.670961 0.893443 0.842105 0.890346 0.919571 3474 3476 chr10 105849357 105850795 chr10:105849357-105850795:+:L1PA6:REF 1 + L1PA6 REF 3prime-truncated MRC5 0.105572 3475 3477 chr10 106257239 106257844 chr10:106257239-106257844:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.746464 0.0216783 0.628155 0.541711 0.231054 0.503484 0.0107914 0.231499 0.338737 0.572895 0.775899 0.821656 3476 3478 chr10 106844583 106850610 chr10:106844583-106850610:-:L1PA2:REF 12 - L1PA2 REF full-length SORCS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.176577 0.681984 0.813394 0.772323 0.821152 0.645455 0.287775 0.861185 0.82334 0.784161 0.850711 0.920474 3477 3479 chr10 107463536 107464312 chr10:107463536-107464312:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.440059 0.726631 0.835731 0.78408 0.682936 0.767956 0.00460476 0.943885 0.835821 0.763824 0.868846 0.81225 3478 3480 chr10 108018882 108021925 chr10:108018882-108021925:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated LINC01435 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.832632 0.0494092 0.448502 0.556373 0.0181661 0.180812 0.00188679 0.384088 0.260051 0.503439 0.726467 0.884901 3479 3481 chr10 108113943 108120006 chr10:108113943-108120006:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.189644 0.786837 0.755191 0.785916 0.511413 0.481959 0.0240296 0.914729 0.870205 0.818182 0.878495 0.926768 3480 3482 chr10 108310130 108316139 chr10:108310130-108316139:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0979467 0.947311 0.718172 0.854653 0.55327 0.819591 0.148591 0.832745 0.848131 0.749016 0.881672 0.398666 3481 3483 chr10 108504410 108510526 chr10:108504410-108510526:+:L1PA5:REF 7 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.936842 0.683333 0.781818 0.728571 0.423529 0.870968 0.8 3482 3484 chr10 108532477 108537868 chr10:108532477-108537868:+:L1P1:REF 7 + L1P1 REF 3prime-truncated HepG2,BJ,MRC5,MCF7,HCT116,IMR90,HEK293 0.22619 0.6 0.480159 0.55 0.125 0.538462 0.816667 3483 3485 chr10 108693741 108695265 chr10:108693741-108695265:+:L1P2:REF 1 + L1P2 REF 3prime-truncated MRC5 0.0 3484 3486 chr10 109131414 109137559 chr10:109131414-109137559:+:L1PA6:REF 11 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.571429 0.0212766 0.294118 0.25463 0.0 0.0229885 0.0 0.0123457 0.0208333 0.350877 0.145161 3485 3487 chr10 109223621 109229635 chr10:109223621-109229635:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.766332 0.440909 0.741514 0.872681 0.285354 0.543147 0.0 0.0434783 0.582822 0.882353 0.707094 0.941176 3486 3488 chr10 109367269 109373405 chr10:109367269-109373405:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863636 0.246154 0.810526 0.756152 0.00757576 0.0217391 0.0 0.109375 0.2 0.787879 0.496855 0.895833 3487 3489 chr10 109546297 109552454 chr10:109546297-109552454:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.270833 0.0806452 0.175 0.170455 0.134615 0.0967742 0.0208333 0.325 0.112903 0.152174 0.193548 0.153846 3488 3490 chr10 109652357 109658473 chr10:109652357-109658473:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.865031 0.374494 0.689057 0.699021 0.142132 0.193292 0.0144928 0.929379 0.694545 0.801948 0.691819 0.898897 3489 3491 chr10 109681560 109687714 chr10:109681560-109687714:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873355 0.368144 0.543547 0.575724 0.20442 0.0900277 0.014652 0.643678 0.624631 0.572854 0.612286 0.905172 3490 3492 chr10 109795499 109801544 chr10:109795499-109801544:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.908083 0.959617 0.839262 0.835 0.71485 0.89566 0.0145051 0.366939 0.897744 0.928067 0.963807 3491 3493 chr10 109825817 109831846 chr10:109825817-109831846:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.821705 0.626157 0.762724 0.822491 0.528 0.674541 0.0316456 0.653756 0.79712 0.69627 0.694168 0.843478 3492 3494 chr10 111043140 111049281 chr10:111043140-111049281:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.841755 0.751366 0.868951 0.842532 0.549348 0.86014 0.0931677 0.936795 0.966769 0.880086 0.903553 0.930233 3493 3495 chr10 111583927 111589948 chr10:111583927-111589948:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.587148 0.832963 0.852197 0.794404 0.468346 0.735632 0.0251938 0.630102 0.807396 0.813702 0.747729 0.813433 3494 3496 chr10 111813807 111819830 chr10:111813807-111819830:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.867866 0.770627 0.776498 0.71641 0.354154 0.450422 0.0164569 0.272832 0.733799 0.722084 0.705961 0.958333 3495 3497 chr10 112062391 112068402 chr10:112062391-112068402:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.524767 0.94874 0.82824 0.860544 0.734661 0.825044 0.0205541 0.77588 0.914775 0.821818 0.950839 0.932692 3496 3498 chr10 112103925 112109951 chr10:112103925-112109951:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.799582 0.634543 0.713154 0.661236 0.389341 0.609354 0.0245098 0.497791 0.793041 0.664298 0.786945 0.815461 3497 3499 chr10 112237295 112237297 chr10:112237295-112237297:-:L1HS:NONREF 1 - L1HS KNR Philippe:EXP_ID_0182 HEK293T 0.0831533 3498 3500 chr10 112250899 112257061 chr10:112250899-112257061:+:L1PA4:REF 8 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,HEK293 0.809524 0.938983 0.839695 0.850099 0.581281 0.526316 0.860119 0.8 3499 3501 chr10 115362336 115368543 chr10:115362336-115368543:-:L1PA2:REF 11 - L1PA2 REF full-length ATRNL1 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.131892 0.918946 0.907238 0.852498 0.857029 0.013624 0.977477 0.962633 0.895038 0.944194 0.954545 3500 3502 chr10 115581746 115587785 chr10:115581746-115587785:-:L1PA3:REF 12 - L1PA3 REF full-length ATRNL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.464229 0.288825 0.635294 0.511262 0.778827 0.475508 0.00803571 0.832512 0.672076 0.744157 0.821505 0.804293 3501 3503 chr10 117079038 117085063 chr10:117079038-117085063:-:L1PA2:REF 12 - L1PA2 REF full-length SHTN1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.279178 0.868116 0.80842 0.824254 0.2302 0.860349 0.234973 0.939449 0.971236 0.849725 0.96544 0.740773 3502 3504 chr10 117832895 117838887 chr10:117832895-117838887:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.330996 0.395468 0.695035 0.479296 0.846414 0.847636 0.434726 0.978512 0.965066 0.473804 0.973737 0.46789 3503 3505 chr10 120234299 120240325 chr10:120234299-120240325:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.642412 0.610742 0.779729 0.772867 0.834421 0.697108 0.00976801 0.809152 0.77562 0.782796 0.875856 0.859649 3504 3506 chr10 120902678 120902680 chr10:120902678-120902680:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip1025,1KGP:L1_umary_LINE1_2031,Philippe:EXP_ID_0184 WDR11 IMR90 0.921986 3505 3507 chr10 120910959 120916983 chr10:120910959-120916983:+:L1PA3:REF 12 + L1PA3 REF full-length WDR11 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.89455 0.901536 0.907313 0.909237 0.879421 0.90176 0.881594 0.898955 0.906994 0.914 0.896869 0.907268 3506 3508 chr10 122695714 122695716 chr10:122695714-122695716:+:L1HS:NONREF 5 + L1HS KNR euL1db:mrip1032,1KGP:L1_umary_LINE1_2033,Philippe:EXP_ID_0185 C10orf120 2102Ep,HepG2,BJ,IMR90,H1 0.0835913 0.950849 0.845649 0.861592 0.907143 Beck_2010:1.0 3507 3509 chr10 125178986 125185121 chr10:125178986-125185121:-:L1PA6:REF 1 - L1PA6 REF full-length MRC5 0.185393 3508 3510 chr10 125945237 125951250 chr10:125945237-125951250:+:L1PA2:REF 12 + L1PA2 REF full-length FANK1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.89393 0.797702 0.874162 0.88808 0.78341 0.913435 0.351587 0.919947 0.866423 0.875 0.871944 0.891753 3509 3511 chr10 126676471 126682458 chr10:126676471-126682458:+:L1PA3:REF 12 + L1PA3 REF full-length C10orf90 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.68316 0.755182 0.698462 0.847053 0.706608 0.782361 0.0145089 0.939793 0.75131 0.759113 0.929241 0.838013 3510 3512 chr10 126761056 126767491 chr10:126761056-126767491:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906977 0.075 0.0645161 0.282895 0.0512821 0.0666667 0.0 0.961538 0.0952381 0.25 0.645833 0.842105 3511 3513 chr10 126881867 126887893 chr10:126881867-126887893:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.2902 0.844063 0.701754 0.635482 0.771429 0.696541 0.0125899 0.853779 0.776543 0.445455 0.960465 0.527828 3512 3514 chr10 128826794 128826796 chr10:128826794-128826796:+:L1HS:NONREF 2 + L1HS KNR euL1db:mrip1049,1KGP:L1_umary_LINE1_2043 HEK293T,HEK293 0.503129 0.780842 3513 3515 chr10 129670136 129670138 chr10:129670136-129670138:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip1050,1KGP:L1_umary_LINE1_2044,Philippe:EXP_ID_0187 MGMT HeLaS3 0.933921 3514 3516 chr10 129732560 129738580 chr10:129732560-129738580:-:L1PA3:REF 12 - L1PA3 REF full-length MGMT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.844512 0.841749 0.848578 0.904475 0.591304 0.920323 0.0232068 0.980789 0.941375 0.919591 0.752817 0.950935 3515 3517 chr10 130152318 130154468 chr10:130152318-130154468:-:L1P2:REF 1 - L1P2 REF 3prime-truncated GLRX3 MRC5 1.0 3516 3518 chr10 131504576 131510718 chr10:131504576-131510718:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90472 0.746995 0.775926 0.801113 0.493357 0.780518 0.0171306 0.209756 0.842561 0.823204 0.708371 0.938731 3517 3519 chr10 132087710 132093874 chr10:132087710-132093874:-:L1PA5:REF 10 - L1PA5 REF full-length JAKMIP3 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.952941 0.703125 0.586667 0.785714 0.3375 0.86 0.854545 0.781818 0.88 0.9 3518 3520 chr11 3900112 3900580 chr11:3900112-3900580:-:L1P1:REF 12 - L1P1 REF 3prime-truncated STIM1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910714 0.966667 0.974011 0.922794 0.899238 0.97486 0.934283 0.936782 0.911734 0.951965 0.935252 0.954442 3519 3521 chr11 3999589 4000000 chr11:3999589-4000000:+:L1P1:REF 12 + L1P1 REF 3prime-truncated STIM1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.861386 0.950207 0.937824 0.949057 0.909091 0.851852 0.941176 0.965116 0.985816 0.971963 0.977011 0.94186 3520 3522 chr11 4014005 4017206 chr11:4014005-4017206:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated STIM1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.952703 0.983333 0.982639 0.853873 0.948553 0.946429 0.932127 0.959596 0.974074 0.964789 0.9729 0.954887 3521 3523 chr11 4170252 4176276 chr11:4170252-4176276:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0461918 0.855529 0.851448 0.889447 0.0198658 0.82509 0.0589595 0.0232384 0.03001 0.855034 0.883673 0.450097 3522 3524 chr11 4531437 4534700 chr11:4531437-4534700:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.715928 0.762582 0.684362 0.325719 0.455197 0.0178571 0.0314136 0.596364 0.182692 0.548495 0.8 0.4375 3523 3525 chr11 4854097 4859276 chr11:4854097-4859276:+:L1P2:REF 12 + L1P2 REF 3prime-truncated OR51H1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.832099 0.0389105 0.55 0.700284 0.331361 0.0625 0.0440252 0.166667 0.252336 0.699074 0.859961 0.875502 3524 3526 chr11 5412302 5418416 chr11:5412302-5418416:+:L1PA3:REF 6 + L1PA3 REF full-length OR51B5 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,HEK293 0.671362 0.276699 0.832366 0.233333 0.112232 0.464286 3525 3527 chr11 5477498 5483518 chr11:5477498-5483518:+:L1PA2:REF 7 + L1PA2 REF full-length OR51B5 2102Ep,HepG2,BJ,MRC5,HCT116,IMR90,HEK293 0.604167 0.686567 0.642857 0.764706 0.826816 0.82963 0.862903 3526 3528 chr11 5914493 5918448 chr11:5914493-5918448:+:L1HS:REF 10 + L1HS REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.735593 0.457863 0.448942 0.262087 0.1621 0.0243902 0.318841 0.371429 0.569182 0.752632 3527 3529 chr11 6143657 6149454 chr11:6143657-6149454:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.236892 0.0508895 0.6299 0.697549 0.226059 0.641577 0.0465244 0.316428 0.81519 0.666262 0.800456 0.769424 3528 3530 chr11 6185350 6191366 chr11:6185350-6191366:+:L1PA2:REF 12 + L1PA2 REF full-length OR52W1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.261013 0.884525 0.851135 0.869613 0.764937 0.837945 0.0301695 0.881075 0.963887 0.894764 0.933127 0.953549 3529 3531 chr11 6948755 6954881 chr11:6948755-6954881:-:L1PA3:REF 12 - L1PA3 REF full-length ZNF215 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.844371 0.752331 0.933333 0.964303 0.977393 0.416149 0.969136 0.373626 0.980149 0.980843 0.972774 0.967118 3530 3532 chr11 7658148 7664171 chr11:7658148-7664171:-:L1PA2:REF 9 - L1PA2 REF full-length CYB5R2 2102Ep,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.877273 0.940299 0.859524 0.84106 0.166667 0.68254 0.911877 0.761589 0.892086 3531 3533 chr11 7734499 7740482 chr11:7734499-7740482:+:L1PA2:REF 3 + L1PA2 REF full-length HeLaS3,K562,IMR90 0.608735 0.0152409 0.854218 3532 3534 chr11 7861034 7867070 chr11:7861034-7867070:+:L1PA2:REF 12 + L1PA2 REF full-length LOC283299 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0935539 0.632549 0.87998 0.824626 0.768381 0.608219 0.0168421 0.429371 0.89 0.789725 0.925981 0.942789 3533 3535 chr11 8396496 8402626 chr11:8396496-8402626:+:L1PA4:REF 12 + L1PA4 REF full-length STK33 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886667 0.799141 0.69898 0.753516 0.944206 0.613839 0.00699301 0.62406 0.966127 0.843666 0.97454 0.881988 3534 3536 chr11 9540333 9546363 chr11:9540333-9546363:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.952724 0.911917 0.96211 0.975879 0.920762 0.875 0.934979 0.017341 0.975503 0.949447 0.906763 0.97205 3535 3537 chr11 9930625 9933967 chr11:9930625-9933967:+:L1PA6:REF 1 + L1PA6 REF 3prime-truncated SBF2 MRC5 0.594595 3536 3538 chr11 10173147 10179353 chr11:10173147-10179353:+:L1PA3:REF 12 + L1PA3 REF full-length SBF2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.907869 0.97352 0.976858 0.983955 0.965859 0.961173 0.311741 0.971845 0.985488 0.972185 0.983496 0.966245 3537 3539 chr11 10946356 10952722 chr11:10946356-10952722:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.900901 0.031746 0.387097 0.589474 0.431818 0.028169 0.0 0.608696 0.906542 0.530612 0.483871 0.910448 3538 3540 chr11 11273887 11274548 chr11:11273887-11274548:+:L1P3:REF 12 + L1P3 REF 3prime-truncated GALNT18 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.851351 0.256484 0.747312 0.684028 0.866995 0.0138889 0.0 0.972222 0.965116 0.86413 0.909707 0.988095 3539 3541 chr11 11711306 11717431 chr11:11711306-11717431:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.917323 0.53726 0.749147 0.752818 0.671451 0.361884 0.0144144 0.74031 0.974803 0.783333 0.883788 0.873874 3540 3542 chr11 12365966 12372097 chr11:12365966-12372097:+:L1PA6:REF 12 + L1PA6 REF full-length MICALCL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.647458 0.604348 0.947658 0.952316 0.879902 0.827751 0.396226 0.75 0.93586 0.952941 0.890869 0.865854 3541 3543 chr11 13479955 13483886 chr11:13479955-13483886:+:L1PA5:REF 11 + L1PA5 REF 3prime-truncated PTH 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.92549 0.817308 0.902439 0.934169 0.993333 0.134146 0.979167 0.969697 0.928571 0.962963 0.955556 3542 3544 chr11 13569850 13575921 chr11:13569850-13575921:+:L1PA6:REF 2 + L1PA6 REF full-length 2102Ep,MRC5 0.541667 0.386293 3543 3545 chr11 13623018 13629231 chr11:13623018-13629231:-:L1PA4:REF 8 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,HEK293 0.75 0.140351 0.510417 0.542088 0.587719 0.884615 0.601852 0.883212 3544 3546 chr11 13651253 13657406 chr11:13651253-13657406:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898239 0.101648 0.674797 0.809771 0.843585 0.336806 0.0217391 0.953297 0.945326 0.798507 0.898734 0.887097 3545 3547 chr11 13990407 13993017 chr11:13990407-13993017:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated SPON1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.940678 0.341935 0.971429 0.833935 0.966667 0.467742 0.0208333 0.956522 0.882353 0.964286 0.93913 0.844444 3546 3548 chr11 14628166 14634160 chr11:14628166-14634160:-:L1PA2:REF 12 - L1PA2 REF full-length PSMA1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.714808 0.979842 0.834846 0.897463 0.969543 0.968182 0.977358 0.976023 0.971171 0.90631 0.973615 0.944898 3547 3549 chr11 14661315 14667447 chr11:14661315-14667447:+:L1PA3:REF 12 + L1PA3 REF full-length PDE3B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.912172 0.902009 0.863192 0.901095 0.978381 0.918984 0.945909 0.962248 0.894915 0.936285 0.971471 0.940449 3548 3550 chr11 14715908 14721938 chr11:14715908-14721938:+:L1PA2:REF 12 + L1PA2 REF full-length PDE3B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.146284 0.972193 0.878672 0.926558 0.900529 0.90128 0.855436 0.965841 0.973819 0.826347 0.881338 0.836242 Rodriguez-Martin_2020:5,Tubio_2014:1 3549 3551 chr11 14844351 14850498 chr11:14844351-14850498:+:L1PA3:REF 7 + L1PA3 REF full-length PDE3B 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.463687 0.854839 0.805263 0.902866 0.966387 0.968254 0.980519 3550 3552 chr11 16141388 16147513 chr11:16141388-16147513:+:L1PA5:REF 12 + L1PA5 REF full-length SOX6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.877323 0.880734 0.772013 0.97094 0.968801 0.239316 0.86036 0.968641 0.694444 0.992908 0.97422 0.946768 3551 3553 chr11 16496332 16500000 chr11:16496332-16500000:+:L1P1:REF 12 + L1P1 REF 3prime-truncated SOX6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.866983 0.47116 0.564761 0.887475 0.942953 0.334199 0.85188 0.556611 0.589592 0.95951 0.949539 0.866452 3552 3554 chr11 16520489 16526642 chr11:16520489-16526642:+:L1PA4:REF 12 + L1PA4 REF full-length SOX6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887755 0.426022 0.684107 0.91671 0.918919 0.2176 0.839695 0.288462 0.846084 0.985366 0.908854 0.839844 3553 3555 chr11 18127075 18128929 chr11:18127075-18128929:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated MRGPRX3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878989 0.916071 0.588161 0.722793 0.294691 0.141593 0.0104031 0.516995 0.814422 0.592506 0.757932 0.872587 3554 3556 chr11 18658797 18664912 chr11:18658797-18664912:+:L1PA5:REF 11 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.935065 0.336957 0.484848 0.447826 0.484848 0.333333 0.025641 0.25 0.6875 0.5 0.638889 3555 3557 chr11 19135060 19141079 chr11:19135060-19141079:+:L1PA3:REF 8 + L1PA3 REF full-length ZDHHC13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,IMR90,HEK293 0.792553 0.804545 0.893855 0.855513 0.824742 0.7 0.913386 0.882812 3556 3558 chr11 19581371 19587519 chr11:19581371-19587519:-:L1PA4:REF 12 - L1PA4 REF full-length NAV2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90776 0.399543 0.950161 0.955235 0.820998 0.907407 0.0021645 0.843137 0.852459 0.917582 0.888466 0.957295 3557 3559 chr11 21271922 21278061 chr11:21271922-21278061:+:L1PA4:REF 12 + L1PA4 REF full-length NELL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909924 0.0632911 0.626039 0.578162 0.412983 0.211111 0.00784314 0.213777 0.652952 0.665385 0.507042 0.9325 3558 3560 chr11 21289217 21290087 chr11:21289217-21290087:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated NELL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.733333 0.0435967 0.365591 0.247019 0.0785124 0.0104167 0.0 0.1875 0.182243 0.190476 0.295385 0.763636 3559 3561 chr11 22001092 22001982 chr11:22001092-22001982:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.805415 0.677647 0.646452 0.65003 0.230585 0.331797 0.00758725 0.468677 0.552083 0.610497 0.572133 0.896104 3560 3562 chr11 22016002 22022021 chr11:22016002-22022021:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.27157 0.795625 0.771268 0.750302 0.568974 0.632594 0.0196749 0.821973 0.835132 0.731263 0.711987 0.908811 3561 3563 chr11 22284807 22290788 chr11:22284807-22290788:+:L1PA2:REF 12 + L1PA2 REF full-length ANO5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.563791 0.693819 0.805195 0.803217 0.952607 0.663293 0.0190476 0.685205 0.900872 0.813579 0.956254 0.961648 3562 3564 chr11 22523178 22529212 chr11:22523178-22529212:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0800757 0.804326 0.529412 0.697682 0.489421 0.640728 0.00793651 0.707341 0.879954 0.657264 0.871002 0.25 3563 3565 chr11 22646925 22652945 chr11:22646925-22652945:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.408133 0.981333 0.867962 0.875292 0.680812 0.82196 0.0471464 0.957771 0.928166 0.914356 0.967561 0.952756 3564 3566 chr11 23028117 23034138 chr11:23028117-23034138:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.817661 0.674618 0.778393 0.879794 0.428121 0.742574 0.0171206 0.620096 0.836948 0.819629 0.636646 0.854071 3565 3567 chr11 23298136 23304191 chr11:23298136-23304191:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.915268 0.840897 0.972694 0.976715 0.732297 0.915652 0.0181159 0.919617 0.951656 0.954074 0.935238 0.974803 3566 3568 chr11 24217113 24223259 chr11:24217113-24223259:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909457 0.328231 0.517974 0.936488 0.153747 0.765625 0.016 0.748677 0.971366 0.89011 0.37055 0.911315 3567 3569 chr11 24327951 24334001 chr11:24327951-24334001:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.071152 0.930225 0.873804 0.955835 0.38853 0.963768 0.0328212 0.768405 0.982115 0.957918 0.915824 0.977075 Brouha_2003:0.0 3568 3570 chr11 25275325 25281473 chr11:25275325-25281473:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.714286 0.230769 0.462963 0.430255 0.203791 0.330189 0.0394737 0.485149 0.741259 0.511111 0.325967 0.876923 3569 3571 chr11 25425132 25431158 chr11:25425132-25431158:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.265203 0.5 0.516251 0.559865 0.406006 0.4784 0.0156069 0.536649 0.656951 0.617562 0.595048 0.552776 3570 3572 chr11 25500009 25502139 chr11:25500009-25502139:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.348659 0.67128 0.715909 0.75382 0.5 0.787879 0.0697674 0.766871 0.86631 0.803922 0.728448 0.865546 3571 3573 chr11 25643792 25649786 chr11:25643792-25649786:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.717042 0.794118 0.835702 0.759347 0.537786 0.652221 0.0589888 0.89701 0.979737 0.823232 0.791385 0.971739 3572 3574 chr11 25719115 25724896 chr11:25719115-25724896:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.801587 0.47931 0.5 0.562971 0.231373 0.424501 0.0577889 0.749153 0.744186 0.550489 0.39115 0.654054 3573 3575 chr11 26113513 26119647 chr11:26113513-26119647:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.914463 0.620314 0.935294 0.972993 0.680516 0.886869 0.00257732 0.983721 0.990323 0.824497 0.976077 3574 3576 chr11 26451095 26457233 chr11:26451095-26457233:+:L1PA3:REF 12 + L1PA3 REF full-length ANO3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.877551 0.506803 0.688612 0.778269 0.625468 0.458698 0.0183486 0.135328 0.714667 0.757895 0.728895 0.950749 3575 3577 chr11 26882200 26883939 chr11:26882200-26883939:+:L1PA3:REF 1 + L1PA3 REF 3prime-truncated MRC5 0.16129 3576 3578 chr11 26965118 26971134 chr11:26965118-26971134:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0600343 0.911982 0.96755 0.986936 0.562994 0.704894 0.0502376 0.788038 0.859924 0.983629 0.941325 0.914504 3577 3579 chr11 27219703 27225730 chr11:27219703-27225730:+:L1PA2:REF 12 + L1PA2 REF full-length BBOX1-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0954839 0.956971 0.978397 0.987885 0.00653266 0.928676 0.0033389 0.84131 0.97217 0.95765 0.932446 0.612045 3578 3580 chr11 27665301 27671022 chr11:27665301-27671022:+:L1PA5:REF 1 + L1PA5 REF 3prime-truncated BDNF-AS MRC5 0.333333 3579 3581 chr11 27682417 27688872 chr11:27682417-27688872:-:L1PA7:REF 12 - L1PA7 REF full-length BDNF-AS 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863636 0.241758 0.952991 0.905983 0.294521 0.547945 0.00490196 0.846154 0.978571 0.94697 0.965753 0.96 3580 3582 chr11 27939073 27945209 chr11:27939073-27945209:+:L1PA3:REF 10 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.967033 0.309524 0.949153 0.96997 0.421769 0.75 0.967742 0.95082 0.964286 0.95 3581 3583 chr11 28216563 28222701 chr11:28216563-28222701:-:L1PA5:REF 12 - L1PA5 REF full-length METTL15 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889908 0.987013 0.973545 0.981853 0.94108 0.972527 0.893305 0.948424 0.977419 0.977492 0.960884 0.991597 3582 3584 chr11 28236554 28238756 chr11:28236554-28238756:-:L1PA3:REF 11 - L1PA3 REF 3prime-truncated METTL15 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.920284 0.984438 0.981293 0.984259 0.981846 0.932647 0.900535 0.976346 0.977912 0.966102 0.966102 3583 3585 chr11 28372620 28378682 chr11:28372620-28378682:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.605425 0.801446 0.961205 0.980138 0.743355 0.954295 0.0679272 0.966258 0.986817 0.973304 0.954114 0.969799 3584 3586 chr11 29050742 29051784 chr11:29050742-29051784:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896243 0.0284153 0.818182 0.932718 0.132653 0.472669 0.0101868 0.0523256 0.985782 0.971483 0.622159 0.963415 3585 3587 chr11 29794460 29798913 chr11:29794460-29798913:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.854133 0.855004 0.67107 0.778039 0.676894 0.812709 0.0914894 0.239057 0.904613 0.898305 0.720556 0.890504 3586 3588 chr11 30051207 30057234 chr11:30051207-30057234:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.829545 0.309859 0.650307 0.61454 0.296443 0.254054 0.015625 0.253886 0.877193 0.752066 0.477876 3587 3589 chr11 30263143 30269287 chr11:30263143-30269287:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898917 0.634011 0.715361 0.76475 0.595804 0.597656 0.0430108 0.669058 0.960854 0.760431 0.894709 0.958525 3588 3590 chr11 31180399 31182593 chr11:31180399-31182593:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated DCDC1 MRC5 0.235294 3589 3591 chr11 31315654 31321680 chr11:31315654-31321680:-:L1HS:REF 12 - L1HS REF full-length DCDC1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0980691 0.860596 0.78627 0.817795 0.959366 0.819767 0.0232295 0.931889 0.978428 0.879108 0.9662 0.959956 3590 3592 chr11 31329394 31335540 chr11:31329394-31335540:-:L1PA6:REF 8 - L1PA6 REF full-length DCDC1 HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HEK293 0.028169 0.392857 0.385906 0.375 0.1625 0.0138889 0.304348 0.642276 3591 3593 chr11 31544010 31550144 chr11:31544010-31550144:+:L1PA3:REF 12 + L1PA3 REF full-length ELP4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.847826 0.98159 0.985044 0.980492 0.970469 0.985222 0.960494 0.917318 0.986656 0.974006 0.981537 0.981373 3592 3594 chr11 31740753 31746893 chr11:31740753-31746893:+:L1PA4:REF 12 + L1PA4 REF full-length ELP4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919226 0.978701 0.982209 0.980274 0.966239 0.981818 0.966234 0.95586 0.976358 0.970255 0.969887 0.968889 3593 3595 chr11 32661712 32667810 chr11:32661712-32667810:-:L1PA5:REF 12 - L1PA5 REF full-length CCDC73 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.89881 0.35084 0.632877 0.784753 0.818428 0.398268 0.0392857 0.736264 0.966387 0.528302 0.894484 0.924658 3594 3596 chr11 32743548 32748080 chr11:32743548-32748080:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated CCDC73 MRC5 0.171348 3595 3597 chr11 32762628 32768484 chr11:32762628-32768484:+:L1PA5:REF 12 + L1PA5 REF full-length CCDC73 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.867634 0.514166 0.549681 0.543945 0.746795 0.839492 0.00433526 0.865497 0.952965 0.651786 0.865918 0.929471 3596 3598 chr11 32941250 32947256 chr11:32941250-32947256:-:L1PA3:REF 12 - L1PA3 REF full-length QSER1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.945805 0.974914 0.981139 0.978944 0.969502 0.987138 0.975422 0.970555 0.982708 0.981366 0.98384 0.967246 3597 3599 chr11 34691292 34692830 chr11:34691292-34692830:-:L1PA2:REF 11 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.0790738 0.969395 0.799926 0.977591 0.885106 0.906504 0.939354 0.981557 0.985224 0.934783 0.966241 3598 3600 chr11 34760210 34764985 chr11:34760210-34764985:-:L1P1:REF 11 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.912514 0.90919 0.779345 0.901935 0.83172 0.743785 0.848564 0.911037 0.820917 0.863514 0.959302 3599 3601 chr11 35702778 35708923 chr11:35702778-35708923:+:L1PA3:REF 12 + L1PA3 REF full-length TRIM44 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.967007 0.982403 0.976087 0.985915 0.96259 0.983008 0.96687 0.980562 0.982001 0.985856 0.981884 0.992063 3600 3602 chr11 35754504 35760643 chr11:35754504-35760643:-:L1PA4:REF 12 - L1PA4 REF full-length TRIM44 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.825888 0.982684 0.967447 0.954294 0.9468 0.96875 0.953171 0.972018 0.984211 0.973799 0.967262 0.928747 3601 3603 chr11 36551606 36557636 chr11:36551606-36557636:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0851393 0.929297 0.884824 0.874469 0.761394 0.811381 0.0196286 0.928273 0.978753 0.880952 0.939586 0.8867 3602 3604 chr11 37204151 37211571 chr11:37204151-37211571:-:L1PA7:REF 1 - L1PA7 REF full-length MRC5 0.104938 3603 3605 chr11 37240712 37246716 chr11:37240712-37246716:-:L1PA2:REF 10 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.663102 0.615385 0.812183 0.725777 0.494624 0.682759 0.975 0.987097 0.854545 0.765152 3604 3606 chr11 38191740 38197885 chr11:38191740-38197885:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.517935 0.740088 0.77585 0.673206 0.589051 0.72825 0.246352 0.858856 0.840792 0.765292 0.732414 0.836276 3605 3607 chr11 38811177 38813505 chr11:38811177-38813505:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.851163 0.396587 0.827728 0.682462 0.165129 0.6337 0.00917431 0.413842 0.98125 0.844622 0.625314 0.952494 3606 3608 chr11 38821101 38822410 chr11:38821101-38822410:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.867521 0.123853 0.732106 0.512915 0.0714286 0.270349 0.00280899 0.966361 0.988417 0.824373 0.484277 0.948276 3607 3609 chr11 39231775 39235554 chr11:39231775-39235554:+:L1PA8:REF 12 + L1PA8 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.842105 0.443609 0.507463 0.365854 0.0 0.111111 0.0 1.0 0.95283 0.459459 0.132653 0.921053 3608 3610 chr11 39755039 39761185 chr11:39755039-39761185:+:L1PA4:REF 7 + L1PA4 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,IMR90,HEK293 0.666667 0.358974 0.41048 0.206349 0.3 0.47541 0.469388 3609 3611 chr11 39846656 39852654 chr11:39846656-39852654:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.772338 0.892372 0.799781 0.845725 0.690987 0.718107 0.0124309 0.93 0.80786 0.863974 0.965986 3610 3612 chr11 39881060 39887029 chr11:39881060-39887029:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.865546 0.173536 0.443299 0.465015 0.095526 0.125704 0.0660377 0.437931 0.946451 0.439803 0.304795 0.922388 3611 3613 chr11 39984014 39990193 chr11:39984014-39990193:+:L1PA5:REF 10 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.891667 0.164179 0.297619 0.463415 0.0263158 0.116667 0.0169492 0.781818 0.380952 0.464286 3612 3614 chr11 40451801 40452101 chr11:40451801-40452101:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated LRRC4C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.861718 0.253772 0.45697 0.476744 0.0168831 0.182836 0.00965251 0.317536 0.852744 0.42348 0.412292 0.859649 3613 3615 chr11 40585472 40591501 chr11:40585472-40591501:-:L1PA2:REF 10 - L1PA2 REF full-length LRRC4C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293,H1 0.455 0.497835 0.564815 0.648111 0.169355 0.301887 0.921569 0.563492 0.462687 0.896552 3614 3616 chr11 40910564 40916694 chr11:40910564-40916694:+:L1PA4:REF 12 + L1PA4 REF full-length LRRC4C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.864865 0.471503 0.457014 0.442132 0.0120643 0.0685579 0.00250627 0.128866 0.96519 0.469697 0.266927 0.820972 3615 3617 chr11 41645094 41651525 chr11:41645094-41651525:-:L1PA7:REF 9 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.647059 0.0714286 0.125 0.0307692 0.0 0.75 0.857143 0.181818 0.0 3616 3618 chr11 41728649 41729424 chr11:41728649-41729424:-:L1PA6:REF 8 - L1PA6 REF 3prime-truncated LINC01499 HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293 0.613333 0.569231 0.542945 0.407407 0.466667 0.0 0.537037 0.622378 3617 3619 chr11 42376823 42382954 chr11:42376823-42382954:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.834074 0.0500642 0.47401 0.312232 0.0414334 0.143868 0.0232068 0.531453 0.914422 0.362924 0.139773 0.902758 3618 3620 chr11 42940332 42946342 chr11:42940332-42946342:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.774102 0.590121 0.685271 0.685913 0.393115 0.383117 0.00715564 0.882432 0.75193 0.728814 0.5625 0.835435 3619 3621 chr11 43095011 43101151 chr11:43095011-43101151:-:L1PA3:REF 7 - L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HCT116,IMR90,HEK293 0.8 0.190789 0.42029 0.0490196 0.103448 0.378378 0.235294 3620 3622 chr11 43201230 43207380 chr11:43201230-43207380:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.843416 0.0253165 0.42069 0.373626 0.0148368 0.0648649 0.027907 0.366337 0.464151 0.331081 0.224324 0.808383 3621 3623 chr11 43346101 43352118 chr11:43346101-43352118:-:L1PA2:REF 11 - L1PA2 REF full-length API5 HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.982085 0.875506 0.976005 0.955827 0.950951 0.918919 0.730268 0.979873 0.826087 0.971503 0.676471 3622 3624 chr11 45011815 45017945 chr11:45011815-45017945:-:L1PA6:REF 5 - L1PA6 REF full-length HepG2,MRC5,HeLaS3,K562,HCT116 0.0992908 0.664122 0.0416667 0.0 0.719298 3623 3625 chr11 45122414 45128497 chr11:45122414-45128497:-:L1PA4:REF 12 - L1PA4 REF full-length PRDM11 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895604 0.455908 0.72808 0.735234 0.443192 0.00494234 0.0047619 0.0890585 0.149577 0.653731 0.903036 0.92 3624 3626 chr11 48185761 48191894 chr11:48185761-48191894:-:L1PA3:REF 1 - L1PA3 REF full-length MRC5 0.628571 3625 3627 chr11 48292435 48297811 chr11:48292435-48297811:+:L1P1:REF 12 + L1P1 REF 3prime-truncated OR4S1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872146 0.0284553 0.303704 0.296804 0.0212766 0.0736842 0.0 0.0471698 0.140187 0.413043 0.285 0.75 3626 3628 chr11 48345978 48352133 chr11:48345978-48352133:+:L1PA4:REF 3 + L1PA4 REF full-length BJ,HEK293T,HEK293 0.613636 0.333333 0.326923 3627 3629 chr11 48527917 48534075 chr11:48527917-48534075:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.694872 0.0512249 0.511792 0.475248 0.0767442 0.0701107 0.00675676 0.251412 0.250674 0.418605 0.473573 0.704036 3628 3630 chr11 48611749 48617901 chr11:48611749-48617901:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.690167 0.0174603 0.306087 0.151102 0.0123457 0.0314342 0.010989 0.16087 0.0756014 0.208469 0.22434 0.394265 3629 3631 chr11 48647822 48649993 chr11:48647822-48649993:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.657459 0.0283688 0.117904 0.191686 0.0134529 0.040724 0.0170455 0.179641 0.212389 0.184466 0.0367347 0.44086 3630 3632 chr11 48744637 48750715 chr11:48744637-48750715:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.607595 0.0141176 0.364796 0.0947522 0.371795 0.0250896 0.00454545 0.490909 0.258065 0.25 0.632653 0.274725 3631 3633 chr11 48847694 48853724 chr11:48847694-48853724:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.356436 0.540191 0.747182 0.736917 0.465077 0.582649 0.024186 0.767795 0.852518 0.741339 0.795294 0.8322 3632 3634 chr11 49725283 49731317 chr11:49725283-49731317:+:L1PA2:REF 12 + L1PA2 REF full-length LOC440040 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.517241 0.681319 0.701527 0.636427 0.709459 0.556878 0.00669643 0.724672 0.699847 0.646091 0.740591 0.69697 3633 3635 chr11 49775119 49781151 chr11:49775119-49781151:-:L1PA2:REF 12 - L1PA2 REF full-length LOC440040 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0936455 0.758427 0.812968 0.825688 0.578199 0.580524 0.0 0.00740741 0.878161 0.855895 0.805785 0.920213 3634 3636 chr11 54708574 54714707 chr11:54708574-54714707:-:L1PA4:REF 12 - L1PA4 REF full-length OR4A5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.808112 0.0671414 0.300439 0.280335 0.0193757 0.0988024 0.0115942 0.24058 0.189907 0.35 0.0509091 0.688285 3635 3637 chr11 54849946 54851079 chr11:54849946-54851079:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.796496 0.119621 0.428969 0.58255 0.185993 0.219002 0.00749766 0.348837 0.606824 0.580495 0.362821 0.720824 3636 3638 chr11 54946966 54952988 chr11:54946966-54952988:+:L1PA2:REF 9 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.701299 0.0578947 0.505618 0.646048 0.122449 0.178082 0.544304 0.5 0.40625 3637 3639 chr11 55084368 55090518 chr11:55084368-55090518:+:L1PA3:REF 8 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,HCT116,IMR90,HEK293 0.777778 0.166667 0.395833 0.537143 0.113636 0.453125 0.534884 0.340909 3638 3640 chr11 55167539 55173664 chr11:55167539-55173664:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.669173 0.00452489 0.0434783 0.0662252 0.0227273 0.0165289 0.0136986 0.177419 0.047619 0.027027 0.028777 0.472973 3639 3641 chr11 55459916 55465937 chr11:55459916-55465937:+:L1PA2:REF 9 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,H1 0.536122 0.613546 0.648485 0.660142 0.384615 0.574074 0.691429 0.719697 0.87156 3640 3642 chr11 55515230 55521224 chr11:55515230-55521224:-:L1PA3:REF 6 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116 0.791667 0.194175 0.301205 0.538462 0.242105 0.462366 3641 3643 chr11 55577164 55583342 chr11:55577164-55583342:+:L1PA3:REF 10 + L1PA3 REF full-length OR4C16 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293,H1 0.942029 0.301075 0.432836 0.523364 0.0512821 0.0945946 0.257143 0.545455 0.189189 0.759259 3642 3644 chr11 55685638 55691665 chr11:55685638-55691665:+:L1PA2:REF 9 + L1PA2 REF full-length HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.489362 0.68599 0.696035 0.183432 0.0733945 0.384615 0.681818 0.715596 0.392405 3643 3645 chr11 56103282 56103287 chr11:56103282-56103287:+:L1HS:NONREF 2 + L1HS KNR euL1db:mrip1247,1KGP:L1_umary_LINE1_2125,Philippe:EXP_ID_0216 OR8H2 HEK293T,HEK293 0.385857 0.628235 3644 3646 chr11 56586668 56592678 chr11:56586668-56592678:-:L1PA3:REF 10 - L1PA3 REF full-length OR5M10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.789189 0.555556 0.743902 0.739884 0.43299 0.641667 0.141975 0.75641 0.746193 0.631902 3645 3647 chr11 56943459 56946170 chr11:56943459-56946170:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.78861 0.546165 0.475124 0.60572 0.199657 0.384 0.00959693 0.0833333 0.352529 0.599045 0.564641 0.8125 3646 3648 chr11 57991051 57993139 chr11:57991051-57993139:-:L1PA8:REF 11 - L1PA8 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.775862 0.957143 0.535714 0.312139 0.285714 0.0333333 0.0 0.5 0.676471 0.552632 0.966667 3647 3649 chr11 58000000 58000187 chr11:58000000-58000187:-:L1HS:REF 9 - L1HS REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,K562,MCF7,HCT116,HEK293,H1 0.829851 0.946465 0.886536 0.468085 0.0121951 0.850467 0.805988 0.761993 0.923077 3648 3650 chr11 58529738 58531777 chr11:58529738-58531777:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated LPXN MRC5 0.591518 3649 3651 chr11 59015244 59021381 chr11:59015244-59021381:+:L1PA3:REF 12 + L1PA3 REF full-length LOC283194 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.845588 0.410233 0.532443 0.54826 0.0350047 0.0519931 0.0069541 0.605528 0.733193 0.549065 0.784856 0.904673 3650 3652 chr11 59315471 59321591 chr11:59315471-59321591:-:L1PA6:REF 10 - L1PA6 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.84058 0.60452 0.719231 0.0865385 0.0701754 0.0133333 0.0514706 0.763441 0.543478 1.0 3651 3653 chr11 59372032 59375454 chr11:59372032-59375454:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated OR5AN1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.80829 0.0834697 0.206972 0.262695 0.00211864 0.025641 0.00294118 0.144144 0.496047 0.237288 0.048048 0.723684 3652 3654 chr11 60435417 60441441 chr11:60435417-60441441:+:L1PA2:REF 12 + L1PA2 REF full-length MS4A5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.818623 0.681295 0.814784 0.830619 0.584245 0.692261 0.0100273 0.899396 0.974528 0.822812 0.806861 0.960677 3653 3655 chr11 60532161 60538190 chr11:60532161-60538190:+:L1PA2:REF 10 + L1PA2 REF full-length MS4A13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.765789 0.777419 0.706161 0.754762 0.587574 0.573222 0.856664 0.921622 0.711628 0.772989 3654 3656 chr11 60550393 60556514 chr11:60550393-60556514:+:L1PA6:REF 11 + L1PA6 REF full-length MS4A13 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.864706 0.462575 0.468953 0.056196 0.186411 0.00956023 0.272727 0.947839 0.518644 0.487768 0.871473 3655 3657 chr11 63072955 63079111 chr11:63072955-63079111:-:L1PA3:REF 12 - L1PA3 REF full-length SLC22A24 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.670213 0.713889 0.567797 0.491704 0.284861 0.177966 0.0137457 0.692708 0.557692 0.666667 0.675 0.8 3656 3658 chr11 63201843 63207573 chr11:63201843-63207573:+:L1P3:REF 2 + L1P3 REF 3prime-truncated SLC22A25 MRC5,HEK293 0.0714286 0.666667 3657 3659 chr11 63313000 63319125 chr11:63313000-63319125:+:L1PA4:REF 7 + L1PA4 REF full-length SLC22A10 2102Ep,HepG2,BJ,MRC5,K562,HCT116,HEK293 0.605263 0.736111 0.598131 0.540342 0.0797101 0.791667 0.68 3658 3660 chr11 63344422 63350438 chr11:63344422-63350438:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873638 0.506224 0.602941 0.670366 0.0836431 0.179661 0.0107843 0.578216 0.392821 0.618395 0.690949 0.901914 3659 3661 chr11 63418731 63424919 chr11:63418731-63424919:+:L1PA4:REF 12 + L1PA4 REF full-length SLC22A9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.742857 0.591954 0.625 0.686567 0.453333 0.419048 0.0 0.745455 0.574074 0.557895 0.861111 0.563636 3660 3662 chr11 63427791 63430440 chr11:63427791-63430440:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.859155 0.00884956 0.191489 0.116129 0.0 0.0192308 0.0 0.576923 0.12069 0.0923077 0.360656 0.761905 3661 3663 chr11 63430446 63435303 chr11:63430446-63435303:+:L1PA7:REF 4 + L1PA7 REF 3prime-truncated MRC5,HEK293T,HCT116,HEK293 0.59375 0.147887 0.0238095 0.0888889 3662 3664 chr11 63435303 63441326 chr11:63435303-63441326:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.708264 0.857203 0.717919 0.80493 0.641509 0.356448 0.0482026 0.771831 0.87451 0.821372 0.895543 0.907323 3663 3665 chr11 71511047 71517198 chr11:71511047-71517198:+:L1PA4:REF 12 + L1PA4 REF full-length NADSYN1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.870637 0.885526 0.878914 0.88523 0.563953 0.704878 0.179435 0.960317 0.954463 0.790984 0.942974 0.965347 3664 3666 chr11 71723727 71729843 chr11:71723727-71729843:+:L1PA4:REF 1 + L1PA4 REF full-length MRC5 0.753846 3665 3667 chr11 74877463 74883532 chr11:74877463-74883532:-:L1PA2:REF 12 - L1PA2 REF full-length XRRA1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.924203 0.983062 0.987735 0.984748 0.955968 0.981668 0.952043 0.963031 0.941961 0.980392 0.974843 0.986965 3666 3668 chr11 74887437 74893565 chr11:74887437-74893565:+:L1PA4:REF 12 + L1PA4 REF full-length XRRA1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.920346 0.982624 0.981235 0.975221 0.887367 0.975309 0.92229 0.961053 0.983723 0.915584 0.961806 0.983306 3667 3669 chr11 75748616 75754649 chr11:75748616-75754649:+:L1PA2:REF 12 + L1PA2 REF full-length LOC283214 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.331839 0.935202 0.938026 0.961406 0.842288 0.750314 0.653169 0.0517598 0.97 0.955679 0.976419 0.90462 3668 3670 chr11 76480616 76481026 chr11:76480616-76481026:+:L1P3:REF 1 + L1P3 REF 3prime-truncated EMSY MRC5 0.5 3669 3671 chr11 76963833 76969955 chr11:76963833-76969955:+:L1PA4:REF 12 + L1PA4 REF full-length ACER3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.811421 0.867909 0.938821 0.880143 0.86461 0.972868 0.947816 0.860724 0.883178 0.868293 0.864994 0.917143 3670 3672 chr11 77218393 77224331 chr11:77218393-77224331:-:L1PA6:REF 5 - L1PA6 REF full-length GDPD4 MRC5,HeLaS3,K562,HCT116,H1 0.407583 0.439462 0.0 0.98835 0.920455 3671 3673 chr11 78677772 78683802 chr11:78677772-78683802:-:L1HS:REF 12 - L1HS REF full-length TENM4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.156309 0.851064 0.905596 0.94433 0.952934 0.797735 0.0298322 0.972167 0.904431 0.953827 0.9625 0.645833 Brouha_2003:0.0 3672 3674 chr11 79552653 79558680 chr11:79552653-79558680:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.755696 0.330743 0.695558 0.688392 0.788462 0.149109 0.0126147 0.945906 0.524059 0.842572 0.881259 0.885057 3673 3675 chr11 79586089 79591129 chr11:79586089-79591129:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.893204 0.0392157 0.588889 0.586614 0.333333 0.0731707 0.0 0.910112 0.330709 0.548387 0.697248 0.790698 3674 3676 chr11 81534298 81540421 chr11:81534298-81540421:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889037 0.466258 0.514094 0.646822 0.2313 0.149225 0.00651466 0.448598 0.58663 0.581121 0.421875 0.901235 3675 3677 chr11 82155865 82161891 chr11:82155865-82161891:+:L1HS:REF 11 + L1HS REF full-length MIR4300HG 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0876414 0.843331 0.836091 0.845415 0.702675 0.0219665 0.836081 0.877577 0.852559 0.877509 0.949921 3676 3678 chr11 82878580 82880656 chr11:82878580-82880656:-:L1P2:REF 12 - L1P2 REF 3prime-truncated PRCP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.875 0.962406 0.934783 0.959064 0.952 0.966292 0.75 0.94186 0.95614 0.981818 0.961905 0.978261 3677 3679 chr11 83266134 83272255 chr11:83266134-83272255:+:L1PA6:REF 10 + L1PA6 REF full-length CCDC90B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293 1.0 0.981818 0.981651 0.978166 1.0 1.0 0.8875 0.986667 0.971429 1.0 3678 3680 chr11 83587648 83593656 chr11:83587648-83593656:+:L1PA2:REF 10 + L1PA2 REF full-length DLG2 2102Ep,HepG2,BJ,MRC5,K562,MCF7,HCT116,IMR90,HEK293,H1 0.270249 0.867654 0.901376 0.9624 0.01059 0.64225 0.80169 0.81931 0.903302 0.768856 3679 3681 chr11 83883955 83890123 chr11:83883955-83890123:+:L1PA3:REF 12 + L1PA3 REF full-length DLG2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.88 0.731383 0.520619 0.569604 0.391414 0.370787 0.00746269 0.689922 0.702233 0.712963 0.820896 0.963504 3680 3682 chr11 83941305 83941307 chr11:83941305-83941307:-:L1HS:NONREF 3 - L1HS KNR euL1db:mrip1332,1KGP:L1_umary_LINE1_2148,Philippe:EXP_ID_0229 DLG2 2102Ep,BJ,MRC5 0.892086 0.83311 0.855198 3681 3683 chr11 85324758 85330821 chr11:85324758-85330821:+:L1HS:REF 12 + L1HS REF full-length DLG2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.225629 0.719388 0.826583 0.849686 0.557644 0.717582 0.0222672 0.979239 0.933678 0.820755 0.918567 0.956308 3682 3684 chr11 85395285 85398909 chr11:85395285-85398909:+:L1PA3:REF 1 + L1PA3 REF 3prime-truncated DLG2 MRC5 0.04 3683 3685 chr11 85414862 85421408 chr11:85414862-85421408:-:L1PA7:REF 12 - L1PA7 REF full-length DLG2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.936747 0.158163 0.667785 0.695 0.38875 0.262821 0.00688073 0.981203 0.894444 0.770833 0.634831 0.96281 3684 3686 chr11 85425651 85429354 chr11:85425651-85429354:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated DLG2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919558 0.543195 0.596871 0.620865 0.227712 0.215496 0.0132325 0.900489 0.861862 0.700787 0.838658 0.896313 3685 3687 chr11 85495930 85500000 chr11:85495930-85500000:+:L1P2:REF 1 + L1P2 REF 3prime-truncated DLG2 MRC5 0.235294 3686 3688 chr11 85542991 85549441 chr11:85542991-85549441:-:L1PA7:REF 12 - L1PA7 REF full-length DLG2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898467 0.447466 0.649396 0.732726 0.333851 0.348485 0.00913242 0.962963 0.887097 0.771883 0.788034 0.971963 3687 3689 chr11 86525882 86531985 chr11:86525882-86531985:+:L1PA4:REF 7 + L1PA4 REF full-length ME3 2102Ep,HepG2,MRC5,HEK293T,MCF7,HCT116,HEK293 0.923077 0.837662 0.982143 0.901099 1.0 0.971429 0.989796 3688 3690 chr11 86540838 86546956 chr11:86540838-86546956:+:L1PA7:REF 12 + L1PA7 REF full-length ME3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.944444 0.00877193 1.0 0.795238 0.8625 0.9375 0.0 0.90566 0.929293 0.973684 0.88 0.972973 3689 3691 chr11 86597959 86604108 chr11:86597959-86604108:+:L1PA3:REF 12 + L1PA3 REF full-length ME3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.879562 0.534247 0.867133 0.870754 0.774681 0.962704 0.0932203 0.724439 0.863268 0.825269 0.939643 0.965517 3690 3692 chr11 86644766 86647289 chr11:86644766-86647289:+:L1PA7:REF 10 + L1PA7 REF 3prime-truncated ME3 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.822222 0.178571 1.0 0.972222 0.777778 0.0 1.0 0.933333 0.954545 0.95 3691 3693 chr11 86650612 86656759 chr11:86650612-86656759:+:L1PA4:REF 12 + L1PA4 REF full-length ME3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.78169 0.360056 0.852518 0.866105 0.735703 0.980769 0.00934579 0.711217 0.849117 0.732218 0.959227 0.926199 3692 3694 chr11 86824478 86830636 chr11:86824478-86830636:-:L1PA3:REF 12 - L1PA3 REF full-length PRSS23 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.793522 0.469072 0.971193 0.978784 0.879093 0.98 0.0285714 0.96789 0.963585 0.963235 0.978261 0.92517 3693 3695 chr11 87047304 87053192 chr11:87047304-87053192:+:L1PA2:REF 12 + L1PA2 REF full-length TMEM135 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.315041 0.984161 0.977175 0.982999 0.971539 0.968085 0.948874 0.97018 0.976507 0.968185 0.988013 0.953168 3694 3696 chr11 87340031 87346061 chr11:87340031-87346061:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.404529 0.937776 0.940519 0.964419 0.947157 0.868243 0.656109 0.967849 0.977813 0.941388 0.978547 0.946785 3695 3697 chr11 87618151 87624199 chr11:87618151-87624199:-:L1PA3:REF 2 - L1PA3 REF full-length MCF7,HCT116 0.587629 0.637168 3696 3698 chr11 87652558 87658716 chr11:87652558-87658716:-:L1PA3:REF 7 - L1PA3 REF full-length HepG2,BJ,MRC5,HEK293T,K562,HCT116,HEK293 0.425 0.873786 0.760286 0.34375 0.018018 0.960526 0.701923 3697 3699 chr11 87758408 87764544 chr11:87758408-87764544:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.88853 0.163205 0.815217 0.584444 0.151986 0.37377 0.00480769 0.144231 0.947748 0.597561 0.76749 0.947368 3698 3700 chr11 87797763 87801645 chr11:87797763-87801645:-:L1PA7:REF 8 - L1PA7 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,HEK293 0.285714 0.634146 0.507407 0.0357143 0.0740741 0.025641 0.9 0.401709 3699 3701 chr11 87855849 87855851 chr11:87855849-87855851:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip1351,1KGP:L1_umary_LINE1_2152,Philippe:EXP_ID_0232 HEK293T,HEK293 0.86435 0.905376 Rodriguez-Martin_2020:1,Tubio_2014:2 3700 3702 chr11 88027243 88033390 chr11:88027243-88033390:+:L1PA3:REF 10 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293,H1 0.908046 0.578947 0.886905 0.971366 0.839286 0.946667 0.966507 0.917293 0.957143 0.947368 3701 3703 chr11 88772451 88778587 chr11:88772451-88778587:-:L1PA6:REF 12 - L1PA6 REF full-length GRM5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.730769 0.456897 0.954955 0.87415 0.416 0.111111 0.0 0.318182 0.989362 0.892857 0.923077 0.972222 3702 3704 chr11 88986995 88993027 chr11:88986995-88993027:+:L1PA4:REF 12 + L1PA4 REF full-length GRM5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.383838 0.408327 0.760309 0.840264 0.550959 0.694915 0.0163399 0.662055 0.982332 0.91511 0.896024 0.915254 3703 3705 chr11 89313260 89319255 chr11:89313260-89319255:-:L1PA2:REF 12 - L1PA2 REF full-length NOX4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.187368 0.732519 0.938329 0.956081 0.837923 0.492958 0.0020141 0.701632 0.983001 0.971564 0.95389 0.972973 3704 3706 chr11 89744187 89750239 chr11:89744187-89750239:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0523198 0.892508 0.853107 0.885882 0.902935 0.848303 0.0160643 0.897541 0.926063 0.898204 0.950372 0.895425 3705 3707 chr11 90089696 90095729 chr11:90089696-90095729:-:L1PA2:REF 5 - L1PA2 REF full-length UBTFL1 HepG2,HEK293T,K562,IMR90,HEK293 0.947269 0.953271 0.0734266 0.900826 0.945245 3706 3708 chr11 90400067 90406098 chr11:90400067-90406098:-:L1HS:REF 12 - L1HS REF full-length DISC1FP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.101215 0.920942 0.791878 0.7873 0.825553 0.571271 0.0271186 0.857283 0.985037 0.78272 0.880309 0.932 Brouha_2003:0.0 3707 3709 chr11 90577471 90583607 chr11:90577471-90583607:-:L1PA4:REF 1 - L1PA4 REF full-length DISC1FP1 MRC5 0.512605 3708 3710 chr11 90685702 90691834 chr11:90685702-90691834:-:L1PA3:REF 12 - L1PA3 REF full-length DISC1FP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.789474 0.316626 0.503311 0.535181 0.216216 0.113014 0.00478469 0.740426 0.974729 0.53012 0.533199 0.934866 3709 3711 chr11 90966271 90972302 chr11:90966271-90972302:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.620968 0.664921 0.76431 0.834377 0.627371 0.715719 0.0207006 0.934211 0.950762 0.854054 0.77521 0.958199 Philippe_2016:1 3710 3712 chr11 92026888 92033124 chr11:92026888-92033124:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.122399 0.5 0.722741 0.707625 0.675834 0.671667 0.18647 0.848586 0.971362 0.740964 0.868638 0.902994 3711 3713 chr11 92169399 92175577 chr11:92169399-92175577:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.836257 0.598073 0.853059 0.87931 0.908156 0.66328 0.0741325 0.867704 0.917355 0.8816 0.950249 0.987377 3712 3714 chr11 93136638 93142673 chr11:93136638-93142673:+:L1HS:REF 6 + L1HS REF full-length SLC36A4 BJ,HeLaS3,HCT116,IMR90,HEK293,H1 0.886139 0.96732 0.902778 0.973437 0.86911 0.96875 Rodriguez-Martin_2020:18 3713 3715 chr11 93420986 93427031 chr11:93420986-93427031:+:L1HS:REF 4 + L1HS REF full-length DEUP1 MRC5,HEK293T,K562,H1 0.401631 0.15528 0.170656 0.0758123 Rodriguez-Martin_2020:13 3714 3716 chr11 93439098 93445217 chr11:93439098-93445217:-:L1PA6:REF 12 - L1PA6 REF full-length DEUP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.557047 0.617574 0.613861 0.777682 0.878099 0.356125 0.0223214 0.680851 0.975425 0.774359 0.93595 0.843902 3715 3717 chr11 94036857 94042888 chr11:94036857-94042888:+:L1PA2:REF 12 + L1PA2 REF full-length HEPHL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.778626 0.813769 0.843063 0.869619 0.778878 0.696356 0.827461 0.898752 0.911602 0.840062 0.849257 0.888738 3716 3718 chr11 94156729 94162863 chr11:94156729-94162863:-:L1PA4:REF 4 - L1PA4 REF full-length PANX1 MRC5,HEK293T,HCT116,HEK293 0.963504 0.9 0.877551 0.906542 3717 3719 chr11 94232524 94238528 chr11:94232524-94238528:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.740741 0.564139 0.734897 0.789485 0.331793 0.499461 0.0090422 0.75 0.873386 0.783747 0.705029 0.909197 3718 3720 chr11 94370376 94376521 chr11:94370376-94376521:+:L1PA4:REF 12 + L1PA4 REF full-length GPR83 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.840376 0.367677 0.398176 0.564841 0.39196 0.134752 0.0176678 0.634615 0.910145 0.563218 0.827586 0.867052 3719 3721 chr11 94384355 94390332 chr11:94384355-94390332:+:L1PA5:REF 12 + L1PA5 REF full-length GPR83 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.894737 0.800389 0.702341 0.762958 0.457819 0.403409 0.0185644 0.905588 0.953535 0.829374 0.873239 0.939271 3720 3722 chr11 95436216 95442246 chr11:95436216-95442246:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.704082 0.802099 0.904435 0.909839 0.820946 0.805882 0.0791139 0.901532 0.954955 0.903376 0.961975 0.964646 Brouha_2003:1.2 3721 3723 chr11 95626326 95632351 chr11:95626326-95632351:-:L1PA2:REF 8 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,IMR90,HEK293,H1 0.362319 0.874477 0.880342 0.973568 0.923497 0.956989 0.966443 0.983471 3722 3724 chr11 95806256 95810906 chr11:95806256-95810906:+:L1PA5:REF 2 + L1PA5 REF 3prime-truncated CEP57 MRC5,HEK293 0.98 1.0 3723 3725 chr11 96405620 96411665 chr11:96405620-96411665:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.145567 0.864574 0.636364 0.916706 0.00405405 0.872611 0.551212 0.0185529 0.909461 0.845494 0.929183 0.496271 3724 3726 chr11 96555590 96561739 chr11:96555590-96561739:+:L1PA3:REF 8 + L1PA3 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,H1 0.880734 0.855556 0.793939 0.613445 0.752294 0.669725 0.878571 0.964497 3725 3727 chr11 96771827 96777820 chr11:96771827-96777820:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.783401 0.787602 0.833145 0.771624 0.465578 0.730858 0.335582 0.716981 0.804213 0.777778 0.654028 0.91236 3726 3728 chr11 96787501 96793683 chr11:96787501-96793683:-:L1PA7:REF 1 - L1PA7 REF full-length MRC5 0.131387 3727 3729 chr11 97040160 97046278 chr11:97040160-97046278:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.828571 0.33354 0.522876 0.599476 0.282667 0.575856 0.0533563 0.156126 0.842365 0.721453 0.477032 0.835404 3728 3730 chr11 97922714 97924372 chr11:97922714-97924372:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.899848 0.322686 0.538084 0.70006 0.109817 0.622871 0.645596 0.130864 0.569585 0.619298 0.111712 0.934817 3729 3731 chr11 98324881 98330921 chr11:98324881-98330921:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.645553 0.662194 0.675488 0.764874 0.574917 0.932741 0.577181 0.0754017 0.88057 0.735849 0.591291 0.930412 3730 3732 chr11 100285746 100291751 chr11:100285746-100291751:+:L1PA2:REF 12 + L1PA2 REF full-length CNTN5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.285851 0.850483 0.823617 0.966515 0.635232 0.788482 0.0146465 0.888889 0.950469 0.858396 0.946565 0.9555 3731 3733 chr11 100409041 100415069 chr11:100409041-100415069:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.714953 0.491049 0.629213 0.940565 0.41784 0.645161 0.0 0.75 0.810606 0.862595 0.881356 0.901515 3732 3734 chr11 100451858 100457873 chr11:100451858-100457873:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.237069 0.822754 0.793203 0.914347 0.560533 0.734918 0.0605263 0.795804 0.944402 0.861765 0.905506 0.941317 3733 3735 chr11 100475720 100481744 chr11:100475720-100481744:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.352941 0.738889 0.705613 0.922909 0.605901 0.693694 0.0122449 0.74505 0.923426 0.814353 0.862944 0.941497 3734 3736 chr11 101280874 101281478 chr11:101280874-101281478:-:L1P1:REF 10 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293,H1 0.80198 0.712858 0.768707 0.836331 0.643836 0.711905 0.978788 0.874003 0.858998 0.903333 3735 3737 chr11 101462008 101467169 chr11:101462008-101467169:-:L1P3:REF 12 - L1P3 REF 3prime-truncated TRPC6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.830645 0.761589 0.966346 0.974771 0.815686 0.405063 0.0 0.96 0.977679 0.960526 0.897059 0.968037 3736 3738 chr11 101566581 101573018 chr11:101566581-101573018:+:L1PA7:REF 6 + L1PA7 REF full-length TRPC6 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562 0.633333 0.0629921 0.85 0.261905 0.0606061 0.0 3737 3739 chr11 101678417 101684557 chr11:101678417-101684557:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.712963 0.127615 0.89719 0.889652 0.135656 0.313433 0.0120385 0.954829 0.897837 0.952201 0.711524 0.893376 3738 3740 chr11 101852489 101858627 chr11:101852489-101858627:+:L1PA3:REF 4 + L1PA3 REF full-length HepG2,MRC5,K562,MCF7 0.123209 0.909853 0.0166667 0.0225564 3739 3741 chr11 102741437 102747464 chr11:102741437-102747464:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.103155 0.0245447 0.890625 0.842602 0.0152116 0.318966 0.027668 0.248366 0.972953 0.93185 0.940476 0.764294 3740 3742 chr11 103136231 103142353 chr11:103136231-103142353:-:L1PA3:REF 9 - L1PA3 REF full-length DYNC2H1 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,IMR90,HEK293 0.969925 0.907527 0.986784 0.98545 0.968944 0.0451807 0.919643 0.992593 0.978836 3741 3743 chr11 103386499 103392632 chr11:103386499-103392632:-:L1PA4:REF 12 - L1PA4 REF full-length DYNC2H1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.74026 0.519527 0.894814 0.800644 0.800456 0.889081 0.0116801 0.972136 0.87935 0.89065 0.801115 0.917012 3742 3744 chr11 103611227 103617451 chr11:103611227-103617451:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.870229 0.152709 0.977064 0.886364 0.865574 0.766355 0.0 0.879121 0.97026 0.991935 0.959184 0.954023 3743 3745 chr11 103814811 103820944 chr11:103814811-103820944:-:L1PA5:REF 1 - L1PA5 REF full-length MRC5 0.714286 3744 3746 chr11 103910305 103913924 chr11:103910305-103913924:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated PDGFD MRC5 0.608911 3745 3747 chr11 105016295 105022323 chr11:105016295-105022323:+:L1PA3:REF 12 + L1PA3 REF full-length CASP5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.292 0.795647 0.898744 0.969847 0.246859 0.983824 0.0074813 0.790462 0.976923 0.927959 0.872102 0.93771 3746 3748 chr11 105872932 105879355 chr11:105872932-105879355:-:L1PA7:REF 1 - L1PA7 REF full-length GRIA4 MRC5 0.0 3747 3749 chr11 106752373 106758635 chr11:106752373-106758635:-:L1PA6:REF 4 - L1PA6 REF full-length GUCY1A2 HepG2,BJ,MRC5,HEK293T 0.392157 0.568182 0.737864 0.75 3748 3750 chr11 107361810 107367839 chr11:107361810-107367839:+:L1PA2:REF 12 + L1PA2 REF full-length CWF19L2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.624609 0.980347 0.988017 0.978178 0.97533 0.986649 0.97748 0.979167 0.975395 0.989387 0.98 0.969512 3749 3751 chr11 107372762 107378780 chr11:107372762-107378780:+:L1PA3:REF 10 + L1PA3 REF full-length CWF19L2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HEK293,H1 0.524933 0.984968 0.868479 0.97773 0.944011 0.89181 0.384697 0.875755 0.942131 0.709494 3750 3752 chr11 108260626 108266643 chr11:108260626-108266643:+:L1PA2:REF 12 + L1PA2 REF full-length ATM 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.947161 0.985726 0.981884 0.981116 0.971648 0.988048 0.968091 0.976831 0.98849 0.947706 0.981169 0.972371 3751 3753 chr11 108356931 108362967 chr11:108356931-108362967:+:L1PA2:REF 12 + L1PA2 REF full-length ATM 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.460411 0.983849 0.978131 0.956245 0.953416 0.857143 0.924107 0.90106 0.965049 0.959627 0.92 0.946078 3752 3754 chr11 108373544 108379636 chr11:108373544-108379636:+:L1PA3:REF 12 + L1PA3 REF full-length C11orf65 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.936681 0.966254 0.973664 0.983613 0.975087 0.932331 0.842143 0.950877 0.979472 0.970845 0.981132 0.983355 3753 3755 chr11 108440855 108444618 chr11:108440855-108444618:+:L1P2:REF 12 + L1P2 REF 3prime-truncated C11orf65 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.846715 0.202941 0.565657 0.777969 0.266932 0.226027 0.125604 0.801887 0.932476 0.687117 0.735409 0.822034 3754 3756 chr11 108444619 108450784 chr11:108444619-108450784:+:L1PA4:REF 12 + L1PA4 REF full-length C11orf65 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.769841 0.575949 0.830882 0.868601 0.741433 0.893204 0.460396 0.95 0.914414 0.878788 0.921466 0.92 3755 3757 chr11 108685166 108685556 chr11:108685166-108685556:-:L1HS:REF 12 - L1HS REF 3prime-truncated DDX10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.959412 0.981048 0.981192 0.986345 0.973618 0.979407 0.969274 0.973444 0.98927 0.951887 0.970109 0.937998 3756 3758 chr11 109177494 109183526 chr11:109177494-109183526:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.319797 0.59822 0.739187 0.75095 0.500867 0.622302 0.0153139 0.793023 0.907591 0.757265 0.810631 0.867089 3757 3759 chr11 109571381 109571839 chr11:109571381-109571839:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902894 0.560835 0.830217 0.896834 0.554765 0.72814 0.0271033 0.464286 0.974407 0.842256 0.834219 0.966299 3758 3760 chr11 110382810 110388912 chr11:110382810-110388912:-:L1PA5:REF 5 - L1PA5 REF full-length LOC105369486 MRC5,HEK293T,MCF7,HCT116,HEK293 0.981818 0.943925 0.936508 0.979167 0.956522 3759 3761 chr11 110507146 110507155 chr11:110507146-110507155:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip1430,1KGP:L1_umary_LINE1_2187,Philippe:EXP_ID_0251 HepG2,MCF7 0.785569 0.822154 Beck_2010:0.0 3760 3762 chr11 112425781 112426847 chr11:112425781-112426847:+:L1PA8:REF 2 + L1PA8 REF 3prime-truncated MRC5,HCT116 0.324324 0.181818 3761 3763 chr11 112678555 112684569 chr11:112678555-112684569:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.933824 0.152344 0.642857 0.568289 0.399478 0.282051 0.0328947 0.125984 0.451282 0.57485 0.662698 0.953125 3762 3764 chr11 113656606 113662757 chr11:113656606-113662757:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.903537 0.630015 0.790837 0.837986 0.752765 0.741935 0.677419 0.873214 0.866232 0.766551 0.828657 0.855787 3763 3765 chr11 114625663 114631683 chr11:114625663-114631683:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.834741 0.281481 0.661082 0.602987 0.310982 0.341463 0.00931677 0.402778 0.821337 0.689394 0.724615 0.879265 3764 3766 chr11 114633465 114639620 chr11:114633465-114639620:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.913516 0.802824 0.775483 0.801897 0.638939 0.609524 0.0204334 0.847826 0.932243 0.75154 0.916192 0.957034 3765 3767 chr11 115024803 115024805 chr11:115024803-115024805:+:L1HS:NONREF 3 + L1HS KNR euL1db:mrip1440,Philippe:EXP_ID_0254 HepG2,MRC5,K562 0.904561 0.806261 0.0142857 3766 3768 chr11 115880773 115881261 chr11:115880773-115881261:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.884903 0.187328 0.518362 0.860041 0.45 0.107527 0.00607287 0.942249 0.538578 0.808 0.883041 0.981283 3767 3769 chr11 115966933 115973116 chr11:115966933-115973116:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.678571 0.366743 0.609442 0.669207 0.66248 0.0896861 0.00809249 0.561694 0.679263 0.828431 0.947465 0.407328 3768 3770 chr11 116004927 116011056 chr11:116004927-116011056:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.89864 0.619792 0.679949 0.798222 0.642604 0.380577 0.00612557 0.468208 0.729844 0.765086 0.860979 0.959752 3769 3771 chr11 121172190 121178325 chr11:121172190-121178325:-:L1PA3:REF 9 - L1PA3 REF full-length TECTA 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.825397 0.598214 0.777778 0.829365 0.857778 0.877778 0.895062 0.793651 0.931217 3770 3772 chr11 121854893 121858091 chr11:121854893-121858091:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.93278 0.720734 0.966287 0.957666 0.572392 0.668605 0.0225564 0.191611 0.987722 0.964481 0.906484 0.969754 3771 3773 chr11 123828031 123830353 chr11:123828031-123830353:-:L1PA6:REF 7 - L1PA6 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116 0.0452261 0.215385 0.357326 0.252632 0.153846 0.12963 0.322222 3772 3774 chr11 125536609 125542640 chr11:125536609-125542640:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.140351 0.895385 0.744207 0.852358 0.910701 0.576671 0.940753 0.0656716 0.89765 0.87057 0.946538 0.869947 3773 3775 chr11 127363161 127369219 chr11:127363161-127369219:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.301987 0.0705951 0.786545 0.755859 0.605359 0.445714 0.00510204 0.767296 0.746094 0.847512 0.892116 3774 3776 chr11 127776695 127782718 chr11:127776695-127782718:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.723875 0.815303 0.830363 0.86392 0.647953 0.681641 0.0186113 0.155245 0.856492 0.846316 0.937409 0.957871 3775 3777 chr11 128140057 128146214 chr11:128140057-128146214:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.899642 0.307229 0.865471 0.855533 0.619594 0.597484 0.00909091 0.375969 0.803954 0.908333 0.936202 0.970537 3776 3778 chr11 129155774 129162305 chr11:129155774-129162305:+:L1PA7:REF 12 + L1PA7 REF full-length ARHGAP32 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868966 0.969773 0.909091 0.890183 0.806876 0.394137 0.00195695 0.932143 0.970451 0.917241 0.945302 0.946309 3777 3779 chr11 129173931 129179956 chr11:129173931-129179956:+:L1PA3:REF 1 + L1PA3 REF full-length ARHGAP32 MRC5 0.993289 3778 3780 chr11 129338915 129344902 chr11:129338915-129344902:-:L1PA3:REF 10 - L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.903846 0.464904 0.872061 0.445019 0.713208 0.021148 0.277473 0.874564 0.942078 0.897959 3779 3781 chr11 130973241 130977550 chr11:130973241-130977550:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.894737 0.125 0.681542 0.935768 0.0230906 0.0625 0.00842697 0.0218579 0.243108 0.814516 0.73057 0.957692 3780 3782 chr11 132320160 132326183 chr11:132320160-132326183:+:L1PA4:REF 12 + L1PA4 REF full-length NTM 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.622614 0.476695 0.731634 0.824254 0.449561 0.523316 0.068615 0.385542 0.610127 0.663664 0.66156 0.668889 3781 3783 chr11 132383419 132389564 chr11:132383419-132389564:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.828619 0.0807339 0.644947 0.577947 0.0122905 0.0863309 0.0074813 0.05 0.166969 0.675 0.324284 0.919236 3782 3784 chr11 132479021 132485108 chr11:132479021-132485108:+:L1PA3:REF 12 + L1PA3 REF full-length OPCML 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.660714 0.18314 0.699706 0.375332 0.0504202 0.0440415 0.0153453 0.0285714 0.120708 0.479911 0.523973 0.850095 3783 3785 chr11 133640803 133646828 chr11:133640803-133646828:+:L1PA2:REF 10 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,HEK293,H1 0.540773 0.535826 0.784211 0.779685 0.484594 0.64539 0.142857 0.794444 0.864583 0.823077 3784 3786 chr12 370612 376718 chr12:370612-376718:-:L1PA5:REF 12 - L1PA5 REF full-length KDM5A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.920976 0.981609 0.990371 0.988994 0.977231 0.992026 0.976 0.979339 0.980287 0.99635 0.96567 0.972281 3785 3787 chr12 2130303 2136321 chr12:2130303-2136321:-:L1PA2:REF 3 - L1PA2 REF full-length CACNA1C 2102Ep,HEK293T,K562 0.281065 0.502538 0.343066 3786 3788 chr12 3392214 3398233 chr12:3392214-3398233:-:L1PA3:REF 12 - L1PA3 REF full-length PRMT8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.256998 0.730577 0.778838 0.769512 0.768446 0.576149 0.171115 0.932299 0.812693 0.571749 0.744576 0.760469 3787 3789 chr12 3500000 3505228 chr12:3500000-3505228:-:L1HS:REF 12 - L1HS REF 3prime-truncated PRMT8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.170455 0.831136 0.766267 0.820225 0.909859 0.641509 0.00875 0.949608 0.950213 0.769373 0.948081 0.816602 Brouha_2003:0.1 Gardner_2017:1,Rodriguez-Martin_2020:24,Tubio_2014:6 3788 3790 chr12 4508895 4514901 chr12:4508895-4514901:+:L1PA2:REF 12 + L1PA2 REF full-length C12orf4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0970437 0.97957 0.97334 0.975111 0.964768 0.982301 0.967914 0.976724 0.976082 0.982811 0.971373 0.764593 3789 3791 chr12 5116426 5122428 chr12:5116426-5122428:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.14881 0.674693 0.947214 0.950725 0.698072 0.704386 0.0094518 0.00742312 0.00696864 0.96962 0.953595 0.810875 3790 3792 chr12 5284940 5290958 chr12:5284940-5290958:-:L1PA3:REF 8 - L1PA3 REF full-length 2102Ep,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,H1 0.0489771 0.928571 0.47929 0.0208333 0.0111111 0.0130293 0.945295 0.812227 3791 3793 chr12 5697472 5700760 chr12:5697472-5700760:+:L1P1:REF 12 + L1P1 REF 3prime-truncated ANO2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.877163 0.644252 0.64 0.761711 0.362179 0.231511 0.107955 0.823666 0.889845 0.784141 0.777154 0.943396 3792 3794 chr12 7251131 7257263 chr12:7251131-7257263:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.761523 0.687269 0.739175 0.801732 0.658915 0.632759 0.817391 0.904851 0.975345 0.778027 0.921842 0.912245 3793 3795 chr12 7508348 7510439 chr12:7508348-7510439:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated CD163 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891003 0.796089 0.92963 0.700132 0.475096 0.320755 0.0128205 0.938776 0.984252 0.783951 0.803763 0.948052 3794 3796 chr12 7543634 7546722 chr12:7543634-7546722:+:L1PA6:REF 1 + L1PA6 REF 3prime-truncated MRC5 0.724638 3795 3797 chr12 8495613 8496484 chr12:8495613-8496484:+:L1P3:REF 1 + L1P3 REF 3prime-truncated MRC5 0.016129 3796 3798 chr12 9521530 9527573 chr12:9521530-9527573:-:L1PA3:REF 8 - L1PA3 REF full-length OVOS 2102Ep,HepG2,BJ,HEK293T,HeLaS3,HCT116,IMR90,HEK293 0.915084 0.98329 0.94389 0.969369 0.959239 0.988309 0.944676 0.97587 3797 3799 chr12 9627298 9633386 chr12:9627298-9633386:-:L1PA5:REF 11 - L1PA5 REF full-length LOC374443 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.842788 0.709945 0.586498 0.856867 0.541667 0.403509 0.407407 0.920561 0.881679 0.628571 0.599156 3798 3800 chr12 9845174 9850042 chr12:9845174-9850042:-:L1P3:REF 12 - L1P3 REF 3prime-truncated KLRF1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889205 0.012987 0.326923 0.665644 0.631579 0.444444 0.151899 0.770115 0.0361446 0.393939 0.621212 0.892857 3799 3801 chr12 11108364 11114661 chr12:11108364-11114661:+:L1PA7:REF 1 + L1PA7 REF full-length PRH1-PRR4 2102Ep 0.795455 3800 3802 chr12 11290236 11296361 chr12:11290236-11296361:+:L1PA4:REF 10 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293,H1 0.828571 0.209877 0.564706 0.507599 0.108527 0.320755 0.376712 0.529412 0.486111 0.666667 3801 3803 chr12 11297656 11303685 chr12:11297656-11303685:+:L1PA2:REF 12 + L1PA2 REF full-length PRB4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0281385 0.424444 0.567442 0.608257 0.624251 0.841592 0.151515 0.649254 0.511099 0.537525 0.667761 0.392208 3802 3804 chr12 11334413 11340550 chr12:11334413-11340550:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.830971 0.279707 0.361823 0.409211 0.307479 0.0194553 0.00492611 0.876106 0.347319 0.238806 0.518703 0.867925 3803 3805 chr12 11377197 11383318 chr12:11377197-11383318:+:L1PA4:REF 11 + L1PA4 REF full-length PRB1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.919431 0.353043 0.534884 0.634369 0.042885 0.0553846 0.587719 0.0718686 0.642202 0.55819 0.885714 3804 3806 chr12 11416212 11420885 chr12:11416212-11420885:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated LOC440084 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.936029 0.247606 0.745955 0.791625 0.630745 0.0762943 0.00240385 0.889205 0.77259 0.703571 0.766458 0.963768 3805 3807 chr12 13391606 13397632 chr12:13391606-13397632:-:L1PA3:REF 9 - L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,MCF7,IMR90,HEK293,H1 0.365399 0.838015 0.785953 0.592275 0.867873 0.949602 0.708937 0.734266 0.94003 3806 3808 chr12 14861686 14867484 chr12:14861686-14867484:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.706456 0.153453 0.53405 0.815249 0.248299 0.31677 0.015 0.607143 0.944615 0.51938 0.519108 0.949495 3807 3809 chr12 16377145 16383292 chr12:16377145-16383292:-:L1PA4:REF 12 - L1PA4 REF full-length MGST1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.478486 0.90377 0.79404 0.956677 0.627097 0.407864 0.0414097 0.372948 0.969713 0.944139 0.715203 0.924798 3808 3810 chr12 16998314 17000000 chr12:16998314-17000000:+:L1P1:REF 12 + L1P1 REF 3prime-truncated SKP1P2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.837889 0.795666 0.712644 0.767413 0.474359 0.508621 0.010101 0.449198 0.924188 0.725 0.618421 0.907407 3809 3811 chr12 17699378 17705544 chr12:17699378-17705544:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.877504 0.706089 0.616836 0.618333 0.419948 0.504651 0.0349127 0.507559 0.978328 0.683582 0.663366 0.94052 3810 3812 chr12 17768360 17774389 chr12:17768360-17774389:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883132 0.685039 0.763011 0.833409 0.663212 0.655914 0.0577223 0.791878 0.974406 0.873418 0.767635 0.962825 3811 3813 chr12 17855568 17861565 chr12:17855568-17861565:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.70047 0.57516 0.750533 0.807373 0.502158 0.737342 0.810198 0.979893 0.78907 0.673516 0.940556 3812 3814 chr12 18023799 18029914 chr12:18023799-18029914:+:L1PA4:REF 10 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.733333 0.564103 0.72973 0.701754 0.609756 0.692308 0.111111 0.717949 0.666667 0.756757 3813 3815 chr12 18760652 18767006 chr12:18760652-18767006:+:L1PA7:REF 1 + L1PA7 REF full-length MRC5 0.863636 3814 3816 chr12 18785211 18791371 chr12:18785211-18791371:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902896 0.71835 0.808496 0.944076 0.802388 0.734375 0.767473 0.857988 0.981679 0.879173 0.826733 0.932939 3815 3817 chr12 19728689 19734844 chr12:19728689-19734844:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.840149 0.71831 0.895417 0.945231 0.755676 0.964222 0.0116667 0.747592 0.988558 0.908108 0.892473 0.95612 3816 3818 chr12 20667835 20673859 chr12:20667835-20673859:+:L1PA3:REF 12 + L1PA3 REF full-length PDE3A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.741109 0.585153 0.707464 0.800765 0.575658 0.935924 0.0189613 0.702703 0.81325 0.7659 0.577465 0.889085 3817 3819 chr12 21209060 21215087 chr12:21209060-21215087:-:L1PA2:REF 12 - L1PA2 REF full-length SLCO1B1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0339853 0.714048 0.771694 0.827821 0.804788 0.799052 0.116681 0.831541 0.978287 0.823733 0.731654 0.78679 3818 3820 chr12 21395009 21401039 chr12:21395009-21401039:+:L1PA2:REF 6 + L1PA2 REF full-length SLCO1A2 2102Ep,MRC5,HEK293T,MCF7,HCT116,HEK293 0.0228137 0.789634 0.846715 0.830769 0.972477 0.876623 3819 3821 chr12 21622800 21627711 chr12:21622800-21627711:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated LDHB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.932299 0.112707 0.870769 0.734266 0.930574 0.845411 0.770624 0.541311 0.983728 0.902941 0.955117 0.950355 3820 3822 chr12 22146187 22147432 chr12:22146187-22147432:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.870166 0.629167 0.517857 0.683196 0.726804 0.0703125 0.0298507 0.938776 0.940909 0.698276 0.720497 0.97619 3821 3823 chr12 22400101 22406177 chr12:22400101-22406177:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.833203 0.116071 0.3769 0.468386 0.05 0.103837 0.0112994 0.87541 0.930081 0.580175 0.234899 0.93617 3822 3824 chr12 23070636 23076652 chr12:23070636-23076652:-:L1PA2:REF 10 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.751857 0.810169 0.780749 0.876984 0.836134 0.542373 0.478873 0.846473 0.775 0.889401 3823 3825 chr12 23821799 23825530 chr12:23821799-23825530:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated SOX5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885312 0.981172 0.581315 0.782427 0.921053 0.197987 0.847751 0.925 0.460377 0.943775 0.906149 0.959459 3824 3826 chr12 24623500 24625755 chr12:24623500-24625755:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated MRC5 0.48 3825 3827 chr12 25486954 25489653 chr12:25486954-25489653:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated LMNTD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0235262 0.803136 0.969995 0.986838 0.969659 0.851227 0.0170532 0.897849 0.98258 0.889339 0.974333 0.55665 3826 3828 chr12 25536714 25542734 chr12:25536714-25542734:+:L1PA3:REF 12 + L1PA3 REF full-length LMNTD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.676856 0.691919 0.881313 0.930357 0.907438 0.958042 0.0 0.971429 0.87247 0.965035 0.92803 0.897917 3827 3829 chr12 26669557 26675709 chr12:26669557-26675709:+:L1PA3:REF 12 + L1PA3 REF full-length ITPR2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.866523 0.983028 0.964795 0.971614 0.953616 0.977992 0.755392 0.973652 0.979198 0.974951 0.95778 0.968011 3828 3830 chr12 27114232 27120439 chr12:27114232-27120439:-:L1PA6:REF 11 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.828904 0.647189 0.836957 0.94401 0.950413 0.903553 0.00972763 0.972177 0.845638 0.94274 0.959538 3829 3831 chr12 27404617 27410753 chr12:27404617-27410753:+:L1PA4:REF 12 + L1PA4 REF full-length ARNTL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919233 0.977823 0.977053 0.97799 0.974178 0.986763 0.161792 0.976048 0.979226 0.986577 0.979578 0.985333 3830 3832 chr12 28073477 28073480 chr12:28073477-28073480:-:L1HS:NONREF 10 - L1HS KNR euL1db:mrip1591,Philippe:EXP_ID_0277 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.11869 0.630942 0.816635 0.765404 0.724255 0.814004 0.82839 0.813743 0.823832 0.807325 3831 3833 chr12 28760230 28761118 chr12:28760230-28761118:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.628563 0.683437 0.887895 0.940126 0.855627 0.89313 0.114175 0.533505 0.972973 0.94006 0.930491 0.965161 3832 3834 chr12 29322812 29323063 chr12:29322812-29323063:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated FAR2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.913866 0.976211 0.942478 0.971261 0.909747 0.984286 0.966844 0.941683 0.965944 0.986555 0.942429 0.899836 3833 3835 chr12 29406310 29412472 chr12:29406310-29412472:-:L1PA3:REF 12 - L1PA3 REF full-length OVCH1-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.821035 0.751811 0.787469 0.857955 0.746067 0.867739 0.194617 0.78911 0.848986 0.78972 0.835106 0.797488 3834 3836 chr12 29809726 29815750 chr12:29809726-29815750:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.900093 0.833885 0.862668 0.951739 0.916787 0.302464 0.0130208 0.603791 0.878522 0.864183 0.899325 0.907545 3835 3837 chr12 29909925 29916045 chr12:29909925-29916045:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.925532 0.0289855 0.480603 0.867983 0.299539 0.595142 0.00470588 0.656904 0.909091 0.638393 0.520115 0.932927 3836 3838 chr12 30365938 30367493 chr12:30365938-30367493:-:L1P2:REF 5 - L1P2 REF 3prime-truncated 2102Ep,HepG2,MRC5,HCT116,HEK293 0.818182 0.0 0.255319 0.75 0.5 3837 3839 chr12 30588353 30594511 chr12:30588353-30594511:+:L1PA4:REF 11 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.977303 0.701299 0.82963 0.972549 0.720165 0.785714 0.134831 0.0740741 0.966038 0.850467 0.962791 3838 3840 chr12 30603853 30608559 chr12:30603853-30608559:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.672104 0.82235 0.685714 0.974128 0.833333 0.605263 0.16309 0.82449 0.855228 0.883065 0.884615 0.774194 3839 3841 chr12 31163074 31169094 chr12:31163074-31169094:+:L1PA3:REF 12 + L1PA3 REF full-length OVOS2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0614152 0.840202 0.838384 0.915796 0.108094 0.794547 0.344877 0.85049 0.972785 0.847656 0.973881 0.847666 3840 3842 chr12 31550066 31556205 chr12:31550066-31556205:-:L1PA4:REF 12 - L1PA4 REF full-length DENND5B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.93578 0.870482 0.867314 0.918981 0.940828 0.885196 0.204082 0.866038 0.921875 0.932099 0.898021 0.927203 3841 3843 chr12 31717943 31719305 chr12:31717943-31719305:-:L1P2:REF 4 - L1P2 REF 3prime-truncated AMN1 2102Ep,MRC5,HEK293T,K562 0.521618 0.966443 0.95 0.2 3842 3844 chr12 33102281 33108456 chr12:33102281-33108456:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.894673 0.518333 0.416667 0.454178 0.0632054 0.249097 0.00746269 0.740909 0.515464 0.601942 0.486005 0.907104 3843 3845 chr12 33141767 33147912 chr12:33141767-33147912:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.862799 0.0509642 0.776579 0.800781 0.324288 0.0586667 0.00701754 0.972543 0.872428 0.78877 0.690096 0.967846 3844 3846 chr12 33172858 33172860 chr12:33172858-33172860:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip1601,1KGP:L1_umary_LINE1_2267,Philippe:EXP_ID_0280 K562 0.143098 Rodriguez-Martin_2020:5 3845 3847 chr12 33772866 33779014 chr12:33772866-33779014:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.862517 0.577236 0.541772 0.60212 0.195122 0.152838 0.544144 0.835007 0.585546 0.588571 0.455714 0.906061 3846 3848 chr12 33864388 33864390 chr12:33864388-33864390:-:L1HS:NONREF 8 - L1HS KNR euL1db:mrip1604,Philippe:EXP_ID_0281 HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293 0.891447 0.860853 0.785148 0.606607 0.676432 0.980883 0.880976 0.878419 3847 3849 chr12 33930454 33936566 chr12:33930454-33936566:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.86864 0.454414 0.556364 0.528033 0.0731707 0.215116 0.442697 0.965035 0.553309 0.528517 0.350495 0.896667 3848 3850 chr12 34066822 34072846 chr12:34066822-34072846:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.840617 0.60737 0.528594 0.682563 0.323446 0.366627 0.0487329 0.927897 0.71824 0.442029 0.492485 0.778495 3849 3851 chr12 34133333 34136632 chr12:34133333-34136632:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856316 0.417742 0.477707 0.583538 0.195446 0.322289 0.473389 0.35 0.905782 0.532751 0.362429 0.783333 3850 3852 chr12 34464049 34470194 chr12:34464049-34470194:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.592511 0.0527383 0.263158 0.262123 0.0833333 0.223214 0.0034965 0.5 0.360614 0.300412 0.0894737 0.595628 3851 3853 chr12 34608506 34614654 chr12:34608506-34614654:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.635631 0.0163265 0.2 0.218123 0.017094 0.0379464 0.012959 0.527397 0.149742 0.295918 0.233663 0.52 3852 3854 chr12 37662543 37666748 chr12:37662543-37666748:-:L1PA3:REF 1 - L1PA3 REF 3prime-truncated MRC5 0.721154 3853 3855 chr12 37681608 37687760 chr12:37681608-37687760:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.89011 0.283654 0.527638 0.413889 0.720779 0.151515 0.0206186 0.926471 0.829268 0.607843 0.90411 0.73913 3854 3856 chr12 37786910 37793054 chr12:37786910-37793054:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.76 0.0155211 0.196262 0.242798 0.0138249 0.0504202 0.00684932 0.141343 0.250602 0.222222 0.0873239 0.5875 3855 3857 chr12 38031433 38037568 chr12:38031433-38037568:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.660907 0.177243 0.286783 0.720165 0.0453515 0.139241 0.00684932 0.566667 0.682779 0.399061 0.35533 0.597884 3856 3858 chr12 38091335 38097473 chr12:38091335-38097473:+:L1PA4:REF 1 + L1PA4 REF full-length MRC5 0.3 3857 3859 chr12 38507885 38510299 chr12:38507885-38510299:+:L1PA6:REF 11 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.5 0.0 0.175676 0.0837209 0.482143 0.666667 0.0 0.0384615 0.88 0.164179 0.5 3858 3860 chr12 38656903 38659786 chr12:38656903-38659786:+:L1PA6:REF 11 + L1PA6 REF 3prime-truncated CPNE8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.959596 0.606299 0.705426 0.549575 0.916667 0.973684 0.487179 0.170213 1.0 0.605505 0.964539 3859 3861 chr12 38799646 38805673 chr12:38799646-38805673:+:L1HS:REF 12 + L1HS REF full-length CPNE8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0930316 0.748808 0.759747 0.609345 0.630262 0.838406 0.123457 0.516463 0.745603 0.802461 0.740901 0.834706 3860 3862 chr12 38963466 38969603 chr12:38963466-38969603:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.683652 0.291709 0.660443 0.588115 0.642094 0.557798 0.0336134 0.511424 0.890231 0.781863 0.725882 0.66092 3861 3863 chr12 38987676 38992577 chr12:38987676-38992577:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.752848 0.235805 0.511018 0.586319 0.545622 0.572755 0.00838323 0.23366 0.96034 0.617857 0.690387 0.782524 3862 3864 chr12 39469654 39475805 chr12:39469654-39475805:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902558 0.331015 0.55259 0.632713 0.825532 0.738956 0.555085 0.233663 0.971037 0.505415 0.80719 0.937063 3863 3865 chr12 39699134 39705085 chr12:39699134-39705085:+:L1PA3:REF 12 + L1PA3 REF full-length C12orf40 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.917332 0.362229 0.791058 0.798434 0.884396 0.915254 0.0909091 0.891321 0.984246 0.777943 0.917479 0.959243 3864 3866 chr12 39745958 39752060 chr12:39745958-39752060:+:L1PA5:REF 12 + L1PA5 REF full-length C12orf40 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.869215 0.412403 0.806061 0.928651 0.928218 0.89049 0.150418 0.906149 0.989339 0.726087 0.869333 0.969231 3865 3867 chr12 39978316 39984339 chr12:39978316-39984339:+:L1PA2:REF 12 + L1PA2 REF full-length SLC2A13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.102337 0.938912 0.960706 0.977652 0.965054 0.969576 0.592894 0.976012 0.97912 0.927696 0.960784 0.917476 3866 3868 chr12 41081468 41087471 chr12:41081468-41087471:-:L1PA3:REF 9 - L1PA3 REF full-length CNTN1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.756757 0.562914 0.784314 0.669388 0.849741 0.549618 0.742857 0.903382 0.902857 3867 3869 chr12 41637415 41643440 chr12:41637415-41643440:-:L1PA2:REF 10 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.669091 0.452703 0.728916 0.776471 0.937158 0.504202 0.768212 0.986622 0.818966 0.923358 3868 3870 chr12 41666304 41672330 chr12:41666304-41672330:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.759079 0.741762 0.662113 0.665229 0.767875 0.506188 0.0281863 0.739669 0.771712 0.686242 0.744701 0.803191 3869 3871 chr12 41672452 41678469 chr12:41672452-41678469:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.897693 0.840237 0.803046 0.699693 0.916746 0.638579 0.0102857 0.892139 0.963173 0.780738 0.907345 0.939948 3870 3872 chr12 41973167 41979337 chr12:41973167-41979337:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895522 0.901699 0.850746 0.789006 0.918919 0.583804 0.0179704 0.942382 0.919444 0.786667 0.910464 0.933333 3871 3873 chr12 42043485 42049636 chr12:42043485-42049636:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.87391 0.0826446 0.816231 0.82918 0.905522 0.618871 0.0980903 0.969283 0.817043 0.90871 0.969032 3872 3874 chr12 42062980 42069120 chr12:42062980-42069120:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891213 0.549587 0.753456 0.724803 0.84755 0.633766 0.0318182 0.956044 0.961814 0.841549 0.882022 0.958549 3873 3875 chr12 42111145 42117288 chr12:42111145-42117288:+:L1PA4:REF 12 + L1PA4 REF full-length GXYLT1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.850568 0.916207 0.905288 0.911303 0.955577 0.966636 0.879097 0.932574 0.981341 0.915052 0.976265 0.904841 3874 3876 chr12 42707902 42714407 chr12:42707902-42714407:+:L1PA7:REF 3 + L1PA7 REF full-length LINC02450 MRC5,IMR90,HEK293 0.498294 0.953846 0.953704 3875 3877 chr12 43227726 43233750 chr12:43227726-43233750:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.232575 0.848918 0.9254 0.924627 0.938338 0.77195 0.156473 0.853781 0.985106 0.955954 0.964327 0.957919 3876 3878 chr12 43470973 43477008 chr12:43470973-43477008:+:L1PA2:REF 12 + L1PA2 REF full-length ADAMTS20 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.128564 0.801055 0.815742 0.83228 0.825076 0.628957 0.0153541 0.832388 0.90796 0.762795 0.790167 0.933409 3877 3879 chr12 43906481 43912505 chr12:43906481-43912505:+:L1PA3:REF 12 + L1PA3 REF full-length TMEM117 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.900387 0.965139 0.974464 0.949115 0.941924 0.914286 0.0490506 0.158833 0.9825 0.947598 0.96452 0.970223 3878 3880 chr12 44108220 44114234 chr12:44108220-44114234:-:L1HS:REF 12 - L1HS REF full-length TMEM117 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0493562 0.975581 0.967627 0.938374 0.903525 0.881416 0.0453375 0.974265 0.974323 0.968885 0.937183 0.950485 3879 3881 chr12 44558360 44559054 chr12:44558360-44559054:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated NELL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871573 0.138462 0.625532 0.439466 0.655541 0.25 0.00959233 0.765957 0.950321 0.528947 0.7411 0.925795 3880 3882 chr12 44681417 44687432 chr12:44681417-44687432:-:L1PA3:REF 12 - L1PA3 REF full-length NELL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.739867 0.608169 0.758451 0.705 0.822992 0.626025 0.0149254 0.882988 0.973746 0.713561 0.945303 0.962594 3881 3883 chr12 44741317 44747454 chr12:44741317-44747454:+:L1PA4:REF 12 + L1PA4 REF full-length NELL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902902 0.405282 0.661036 0.638961 0.712617 0.271577 0.00803213 0.549045 0.960694 0.716141 0.829082 0.966825 3882 3884 chr12 44897325 44900740 chr12:44897325-44900740:+:L1PA7:REF 11 + L1PA7 REF 3prime-truncated NELL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.914773 0.0941176 0.183333 0.246316 0.54023 0.115108 0.0392157 0.545455 0.943925 0.445783 0.699346 3883 3885 chr12 44931705 44937851 chr12:44931705-44937851:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.846445 0.48552 0.801521 0.792275 0.744753 0.600715 0.136602 0.456967 0.873473 0.768333 0.831461 0.926829 3884 3886 chr12 44950958 44956988 chr12:44950958-44956988:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.226405 0.810238 0.853753 0.866642 0.913907 0.824132 0.018244 0.956616 0.980436 0.832037 0.928736 0.926278 3885 3887 chr12 45370846 45376865 chr12:45370846-45376865:+:L1PA3:REF 12 + L1PA3 REF full-length ANO6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.936402 0.980664 0.981005 0.980132 0.97148 0.965174 0.976947 0.96254 0.979098 0.980682 0.983913 0.968641 3886 3888 chr12 45701234 45701236 chr12:45701234-45701236:-:L1HS:NONREF 2 - L1HS KNR Philippe:EXP_ID_0294 2102Ep,MRC5 0.974026 0.980926 3887 3889 chr12 46246032 46248874 chr12:46246032-46248874:+:L1PA6:REF 7 + L1PA6 REF 3prime-truncated SLC38A1 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.888889 0.972973 0.860465 0.974026 1.0 0.976744 0.9375 3888 3890 chr12 46283516 46289653 chr12:46283516-46289653:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.847357 0.019857 0.663507 0.812975 0.486129 0.655738 0.0367394 0.890123 0.809476 0.729604 0.714822 0.953935 3889 3891 chr12 46307044 46313162 chr12:46307044-46313162:-:L1PA5:REF 11 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.839329 0.162207 0.560302 0.565926 0.230126 0.580488 0.0434783 0.935574 0.922717 0.649123 0.571072 3890 3892 chr12 46420944 46427078 chr12:46420944-46427078:-:L1PA2:REF 6 - L1PA2 REF full-length LOC100288798 2102Ep,HepG2,BJ,MRC5,MCF7,HCT116 0.885714 0.983333 0.928571 0.965665 0.914286 0.989899 3891 3893 chr12 46539930 46546054 chr12:46539930-46546054:-:L1PA5:REF 12 - L1PA5 REF full-length LOC100288798 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.927126 0.978562 0.969008 0.973023 0.841555 0.981132 0.873894 0.972286 0.986056 0.988889 0.956848 0.94898 3892 3894 chr12 46617497 46623643 chr12:46617497-46623643:+:L1PA3:REF 9 + L1PA3 REF full-length LOC100288798 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.904 0.981481 0.962865 0.452381 0.989583 0.989474 0.963855 0.916667 0.949153 3893 3895 chr12 46736988 46743143 chr12:46736988-46743143:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.947368 3894 3896 chr12 46991807 46997956 chr12:46991807-46997956:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871703 0.579243 0.904172 0.858293 0.452964 0.937628 0.030303 0.519731 0.967988 0.924837 0.855573 0.939103 3895 3897 chr12 47056718 47062860 chr12:47056718-47062860:+:L1PA4:REF 9 + L1PA4 REF full-length 2102Ep,BJ,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.873418 0.835498 0.543689 0.844203 0.76874 0.941098 0.848024 0.739754 0.916129 3896 3898 chr12 47426904 47432928 chr12:47426904-47432928:+:L1PA3:REF 12 + L1PA3 REF full-length LINC02156 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.686626 0.673179 0.938944 0.938823 0.725643 0.0101322 0.323772 0.911557 0.930518 0.892355 0.834293 0.903862 3897 3899 chr12 48320193 48326175 chr12:48320193-48326175:-:L1PA3:REF 12 - L1PA3 REF full-length H1FNT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923329 0.816124 0.804921 0.834375 0.866894 0.742902 0.603542 0.819415 0.973837 0.866873 0.908994 0.92449 3898 3900 chr12 48403176 48409317 chr12:48403176-48409317:-:L1PA3:REF 9 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.875969 0.820225 0.8 0.751969 0.785714 0.893333 0.8 0.864407 0.8 3899 3901 chr12 48409323 48410566 chr12:48409323-48410566:-:L1P2:REF 1 - L1P2 REF 3prime-truncated MRC5 0.0 3900 3902 chr12 48474255 48478717 chr12:48474255-48478717:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated ANP32D 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.732815 0.172511 0.259036 0.261785 0.498452 0.319106 0.0109489 0.274793 0.790102 0.219373 0.512915 0.5 3901 3903 chr12 48552504 48554329 chr12:48552504-48554329:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.818182 0.0 0.342857 0.484848 0.0909091 0.0238095 0.037037 0.0 0.205882 0.25 0.804878 0.882353 3902 3904 chr12 51562631 51568657 chr12:51562631-51568657:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0558824 0.9128 0.921714 0.896023 0.500237 0.751288 0.0245327 0.26793 0.144054 0.909768 0.9716 0.869351 3903 3905 chr12 51568648 51571798 chr12:51568648-51571798:-:L1PA3:REF 11 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.94966 0.831983 0.981488 0.927066 0.954592 0.713193 0.275937 0.972038 0.986671 0.945102 0.972845 3904 3906 chr12 54788573 54794627 chr12:54788573-54794627:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.328643 0.798794 0.749323 0.678178 0.777463 0.59663 0.0343023 0.897919 0.862381 0.830128 0.841291 0.877653 3905 3907 chr12 54882885 54889034 chr12:54882885-54889034:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.568 0.510441 0.656652 0.622793 0.37224 0.463357 0.020979 0.451515 0.617647 0.67451 0.809339 0.884615 3906 3908 chr12 55081365 55087407 chr12:55081365-55087407:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.482488 0.574394 0.666125 0.690642 0.512594 0.509567 0.0274123 0.714669 0.724261 0.705882 0.821306 0.951432 3907 3909 chr12 55096256 55102283 chr12:55096256-55102283:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.14032 0.897204 0.773109 0.774929 0.663278 0.65984 0.0297915 0.843662 0.896918 0.813531 0.831325 0.887712 3908 3910 chr12 55161585 55167616 chr12:55161585-55167616:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.834783 0.839416 0.714286 0.733221 0.698246 0.688679 0.0337079 0.646853 0.824104 0.734266 0.844311 3909 3911 chr12 55210434 55212283 chr12:55210434-55212283:+:L1PA3:REF 10 + L1PA3 REF 3prime-truncated OR10A7 2102Ep,HepG2,BJ,MRC5,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.911972 0.800495 0.671216 0.669761 0.412121 0.494662 0.782235 0.621176 0.434921 0.960573 3910 3912 chr12 55344249 55350274 chr12:55344249-55350274:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.772093 0.808765 0.807229 0.831915 0.662551 0.619951 0.013245 0.507692 0.840841 0.907895 0.779202 3911 3913 chr12 55354942 55361385 chr12:55354942-55361385:+:L1PA7:REF 1 + L1PA7 REF full-length OR6C75 MRC5 0.221053 3912 3914 chr12 55484008 55490018 chr12:55484008-55490018:+:L1PA2:REF 12 + L1PA2 REF full-length OR6C68 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.31293 0.87146 0.577744 0.681449 0.486784 0.397578 0.0259638 0.640316 0.792982 0.653061 0.684575 0.77957 3913 3915 chr12 55504697 55510839 chr12:55504697-55510839:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910456 0.788235 0.632568 0.618206 0.215484 0.0458716 0.00380952 0.281614 0.418093 0.701046 0.643261 0.931937 3914 3916 chr12 55560427 55566502 chr12:55560427-55566502:+:L1PA3:REF 12 + L1PA3 REF full-length OR2AP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902107 0.705435 0.708621 0.703647 0.404063 0.581818 0.0142857 0.656769 0.849315 0.789969 0.613285 0.873285 3915 3917 chr12 55589937 55595956 chr12:55589937-55595956:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.62922 0.485636 0.689427 0.700918 0.682329 0.430291 0.09375 0.738894 0.663097 0.773292 0.873112 0.931624 3916 3918 chr12 55598092 55604209 chr12:55598092-55604209:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.870175 0.256993 0.472284 0.492676 0.0218487 0.0432099 0.019337 0.536585 0.492441 0.426829 0.258772 0.855556 3917 3919 chr12 56965991 56967070 chr12:56965991-56967070:+:L1PA5:REF 8 + L1PA5 REF 3prime-truncated RDH16 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,IMR90,HEK293 0.877778 0.721154 0.838235 0.931271 0.761905 0.911765 0.791667 0.875 3918 3920 chr12 57646479 57652498 chr12:57646479-57652498:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.791304 0.516971 0.659864 0.632148 0.343407 0.884615 0.0751174 0.378855 0.826625 0.743056 0.619403 0.736842 3919 3921 chr12 58051823 58053653 chr12:58051823-58053653:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.821588 0.592145 0.590164 0.740014 0.24593 0.318987 0.00399467 0.963247 0.888104 0.734742 0.548466 0.866228 3920 3922 chr12 58053653 58059697 chr12:58053653-58059697:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.660822 0.562024 0.649027 0.853979 0.390031 0.462523 0.0137207 0.958057 0.865505 0.808847 0.631179 0.790654 3921 3923 chr12 58109257 58115306 chr12:58109257-58115306:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872299 0.579235 0.804035 0.774194 0.366541 0.65641 0.0101523 0.855705 0.956072 0.764085 0.738938 0.926667 3922 3924 chr12 58226938 58233087 chr12:58226938-58233087:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87965 0.286713 0.692399 0.752513 0.0761671 0.386313 0.00159744 0.942584 0.953374 0.71789 0.677807 0.926966 3923 3925 chr12 58471406 58477554 chr12:58471406-58477554:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.953351 0.803384 0.984157 0.976538 0.597043 0.931257 0.0114723 0.623452 0.977465 0.967452 0.965629 0.986517 3924 3926 chr12 58708188 58710506 chr12:58708188-58710506:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated LINC02388 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.85 0.393939 0.878788 0.837953 0.23871 0.131313 0.0102041 0.876712 0.955556 0.873874 0.532609 0.909091 3925 3927 chr12 59225285 59228476 chr12:59225285-59228476:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.712644 0.517483 0.680672 0.829736 0.380952 0.396552 0.0983607 0.703704 0.992701 0.855263 0.595506 1.0 3926 3928 chr12 59751112 59757266 chr12:59751112-59757266:+:L1PA3:REF 12 + L1PA3 REF full-length SLC16A7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.9131 0.840951 0.974359 0.948127 0.674897 0.90107 0.0454545 0.96831 0.936348 0.962406 0.89037 0.917031 3927 3929 chr12 60234374 60240761 chr12:60234374-60240761:+:L1PA7:REF 6 + L1PA7 REF full-length HepG2,MRC5,HEK293T,K562,HCT116,HEK293 0.164474 0.909091 0.025 0.142857 0.954545 0.458333 3928 3930 chr12 61076393 61076652 chr12:61076393-61076652:+:L1PA4:REF 11 + L1PA4 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.444816 0.614504 0.693587 0.695455 0.669173 0.0374532 0.642857 0.722656 0.580645 0.697436 0.342857 3929 3931 chr12 61293783 61299916 chr12:61293783-61299916:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.926984 0.336066 0.75 0.836039 0.304 0.417266 0.0124224 0.815385 0.975352 0.714286 0.675105 0.984962 3930 3932 chr12 61414978 61421115 chr12:61414978-61421115:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.903704 0.7 0.672956 0.775862 0.352041 0.482014 0.963855 0.942857 0.736364 0.660714 0.909091 3931 3933 chr12 61922306 61926790 chr12:61922306-61926790:+:L1PA7:REF 10 + L1PA7 REF 3prime-truncated TAFA2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.461538 0.191919 0.4 0.488372 0.159722 0.147059 0.0 0.540541 0.525424 0.392523 3932 3934 chr12 61941440 61947489 chr12:61941440-61947489:+:L1PA2:REF 12 + L1PA2 REF full-length TAFA2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.106347 0.675896 0.72449 0.701455 0.563319 0.613982 0.00917431 0.901889 0.979051 0.82933 0.768254 0.956072 3933 3935 chr12 62819802 62825895 chr12:62819802-62825895:+:L1PA6:REF 2 + L1PA6 REF full-length PPM1H 2102Ep,MRC5 0.673469 0.808 3934 3936 chr12 63165490 63168401 chr12:63165490-63168401:-:L1P2:REF 9 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90 0.304348 0.166667 0.357143 0.398876 0.193548 0.228571 0.0 0.227273 0.6 3935 3937 chr12 63336890 63343011 chr12:63336890-63343011:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.813043 0.162011 0.489796 0.488665 0.814634 0.122137 0.0 0.736318 0.978836 0.504762 0.890845 0.904762 3936 3938 chr12 63434166 63436476 chr12:63434166-63436476:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.9 0.196629 0.553892 0.574813 0.849246 0.321053 0.0164609 0.873529 0.959368 0.608392 0.870206 0.902857 3937 3939 chr12 63628081 63634219 chr12:63628081-63634219:+:L1PA4:REF 11 + L1PA4 REF full-length DPY19L2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.827407 0.182093 0.944705 0.933715 0.850476 0.669246 0.00783699 0.885806 0.963868 0.933602 0.953704 3938 3940 chr12 64195587 64201638 chr12:64195587-64201638:+:L1PA2:REF 12 + L1PA2 REF full-length C12orf66 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0857378 0.985009 0.971377 0.987208 0.942791 0.980249 0.920645 0.981025 0.980752 0.980306 0.973951 0.912587 3939 3941 chr12 64287349 64293377 chr12:64287349-64293377:-:L1PA2:REF 5 - L1PA2 REF full-length C12orf56 2102Ep,HepG2,HEK293T,K562,MCF7 0.0275142 0.895028 0.715385 0.00217865 0.702899 3940 3942 chr12 65555418 65555740 chr12:65555418-65555740:-:L1PA3:REF 6 - L1PA3 REF 3prime-truncated LOC100507065 2102Ep,HepG2,MRC5,HEK293T,HCT116,IMR90 0.979798 0.956522 0.984043 0.988095 0.975 0.952381 3941 3943 chr12 66521519 66527684 chr12:66521519-66527684:+:L1PA4:REF 12 + L1PA4 REF full-length GRIP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.786429 0.387493 0.74552 0.751889 0.844156 0.442308 0.0394633 0.879421 0.681573 0.714474 0.849966 0.900867 3942 3944 chr12 66578267 66584409 chr12:66578267-66584409:+:L1PA3:REF 12 + L1PA3 REF full-length GRIP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.848124 0.779286 0.85636 0.851892 0.928399 0.394737 0.0698413 0.528584 0.790656 0.788235 0.954241 0.965066 3943 3945 chr12 67843805 67849821 chr12:67843805-67849821:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.926712 0.776471 0.920043 0.918504 0.764449 0.62623 0.0216561 0.636787 0.932584 0.886486 0.895054 0.981579 3944 3946 chr12 67900208 67906224 chr12:67900208-67906224:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.528912 0.595989 0.905973 0.908629 0.872279 0.603233 0.145012 0.806494 0.841091 0.894127 0.875321 0.882353 3945 3947 chr12 69773410 69779441 chr12:69773410-69779441:-:L1HS:REF 12 - L1HS REF full-length RAB3IP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.015807 0.981127 0.854437 0.90121 0.924901 0.897764 0.449361 0.631006 0.981146 0.906744 0.934239 0.845417 3946 3948 chr12 70013065 70019067 chr12:70013065-70019067:+:L1PA2:REF 10 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.140614 0.169811 0.803077 0.522251 0.630712 0.0461039 0.905493 0.748914 0.964912 0.703257 3947 3949 chr12 70660206 70660208 chr12:70660206-70660208:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip1743,1KGP:L1_umary_LINE1_2310,Philippe:EXP_ID_0306 PTPRR MRC5 0.889258 3948 3950 chr12 70765020 70771163 chr12:70765020-70771163:+:L1PA3:REF 12 + L1PA3 REF full-length PTPRR 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902672 0.427984 0.719481 0.683616 0.838636 0.969432 0.726984 0.834239 0.97019 0.786408 0.837758 0.939535 3949 3951 chr12 71118072 71124103 chr12:71118072-71124103:+:L1PA2:REF 12 + L1PA2 REF full-length TSPAN8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.305389 0.907692 0.815397 0.805257 0.856383 0.914019 0.0170015 0.721293 0.913735 0.851711 0.919283 0.731463 3950 3952 chr12 72150397 72156542 chr12:72150397-72156542:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.865955 0.125847 0.699728 0.837475 0.830091 0.315686 0.0126939 0.313117 0.964115 0.775758 0.7 0.953901 3951 3953 chr12 72514640 72520656 chr12:72514640-72520656:-:L1PA3:REF 12 - L1PA3 REF full-length TRHDE 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.147087 0.385943 0.972589 0.980237 0.104251 0.608225 0.0308123 0.480048 0.97967 0.97012 0.808442 0.938224 3952 3954 chr12 72634504 72640519 chr12:72634504-72640519:-:L1PA3:REF 12 - L1PA3 REF full-length TRHDE 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.437103 0.664688 0.785886 0.818522 0.108683 0.55808 0.0622372 0.438948 0.82799 0.741758 0.755431 0.773312 3953 3955 chr12 72779885 72782016 chr12:72779885-72782016:+:L1P3:REF 2 + L1P3 REF 3prime-truncated MRC5,HCT116 0.557692 0.969697 3954 3956 chr12 73147617 73153645 chr12:73147617-73153645:-:L1PA2:REF 12 - L1PA2 REF full-length LINC02444 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.076 0.0104167 0.772786 0.761991 0.366667 0.604374 0.0228426 0.199257 0.923773 0.791367 0.639626 0.898964 3955 3957 chr12 73193623 73199787 chr12:73193623-73199787:-:L1PA3:REF 12 - L1PA3 REF full-length LINC02444 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.894835 0.801235 0.816735 0.829894 0.877422 0.529142 0.031016 0.665496 0.985282 0.84467 0.688195 0.952635 3956 3958 chr12 73283667 73289668 chr12:73283667-73289668:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.35406 0.769167 0.681034 0.741379 0.841772 0.623477 0.0213675 0.688679 0.867832 0.673537 0.682199 0.88547 3957 3959 chr12 73394809 73400830 chr12:73394809-73400830:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.715019 0.633649 0.59611 0.711986 0.933713 0.616962 0.0276104 0.676445 0.922008 0.625923 0.804435 0.845116 3958 3960 chr12 73500000 73504208 chr12:73500000-73504208:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.916479 0.396552 0.607011 0.586164 0.759709 0.241379 0.0200669 0.403909 0.981233 0.548872 0.462916 0.933333 3959 3961 chr12 73977927 73983898 chr12:73977927-73983898:+:L1PA3:REF 10 + L1PA3 REF full-length HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.570887 0.723678 0.890223 0.383465 0.213188 0.753697 0.979133 0.745872 0.806551 0.952059 3960 3962 chr12 74503521 74509541 chr12:74503521-74509541:-:L1PA3:REF 10 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.0530303 0.00662252 0.802048 0.83693 0.00294118 0.646667 0.00555556 0.988539 0.821429 0.895582 3961 3963 chr12 74874868 74880901 chr12:74874868-74880901:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0535623 0.423755 0.828961 0.897384 0.875519 0.923544 0.0147939 0.979009 0.976445 0.635448 0.918221 0.959142 3962 3964 chr12 75517430 75523582 chr12:75517430-75523582:-:L1PA4:REF 12 - L1PA4 REF full-length KRR1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905429 0.709544 0.904465 0.958702 0.949814 0.845036 0.207668 0.923077 0.977753 0.931478 0.933249 0.971374 3963 3965 chr12 76319624 76325685 chr12:76319624-76325685:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.206583 0.0131372 0.967822 0.901624 0.0268336 0.0923567 0.0120056 0.0128866 0.980254 0.933227 0.848739 0.761141 3964 3966 chr12 77173381 77179424 chr12:77173381-77179424:-:L1PA2:REF 7 - L1PA2 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7 0.0584468 0.802009 0.888 0.688462 0.724138 0.043662 0.666667 3965 3967 chr12 77459286 77464442 chr12:77459286-77464442:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.861141 0.264744 0.669024 0.609899 0.319092 0.105134 0.00796813 0.117438 0.875371 0.578635 0.277273 0.890863 3966 3968 chr12 77653964 77660122 chr12:77653964-77660122:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883455 0.324062 0.907809 0.904286 0.888719 0.404004 0.0140845 0.659626 0.979067 0.858097 0.83577 0.933507 3967 3969 chr12 78506430 78512587 chr12:78506430-78512587:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.77193 0.467692 0.702873 0.900901 0.865595 0.356322 0.00571895 0.623501 0.981595 0.802691 0.675872 0.958702 3968 3970 chr12 78608485 78609976 chr12:78608485-78609976:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.882927 0.343358 0.699052 0.901027 0.778579 0.464467 0.00854701 0.736536 0.974175 0.75 0.746398 0.976234 3969 3971 chr12 79039621 79045645 chr12:79039621-79045645:-:L1PA2:REF 12 - L1PA2 REF full-length SYT1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.066273 0.943898 0.921463 0.981132 0.00523903 0.87439 0.105919 0.00849118 0.978084 0.984402 0.952381 0.646976 3970 3972 chr12 79861341 79867483 chr12:79861341-79867483:+:L1PA7:REF 7 + L1PA7 REF full-length PPP1R12A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116 0.942857 0.959459 0.965517 0.991667 0.986667 0.96 1.0 3971 3973 chr12 80074669 80080828 chr12:80074669-80080828:-:L1PA3:REF 10 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293,H1 0.806122 0.747748 0.78481 0.9 0.833333 0.8 0.782051 0.816092 0.88 0.923077 3972 3974 chr12 80080827 80084722 chr12:80080827-80084722:-:L1PA7:REF 11 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.863014 0.0 0.636364 0.869565 0.653846 0.157895 0.0909091 0.92 0.910714 0.916667 0.75 3973 3975 chr12 80144055 80150076 chr12:80144055-80150076:-:L1PA3:REF 12 - L1PA3 REF full-length OTOGL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.12711 0.458876 0.941767 0.967174 0.592187 0.790484 0.0547533 0.567529 0.981291 0.97672 0.793631 0.957068 3974 3976 chr12 80244169 80250184 chr12:80244169-80250184:-:L1PA2:REF 12 - L1PA2 REF full-length OTOGL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0502061 0.745547 0.866184 0.973269 0.969477 0.766578 0.019333 0.934545 0.984825 0.967191 0.949042 0.810634 3975 3977 chr12 80283863 80290348 chr12:80283863-80290348:-:L1PA8:REF 12 - L1PA8 REF full-length OTOGL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.86506 0.305654 0.505967 0.719139 0.795745 0.0695652 0.0179104 0.835866 0.924242 0.609375 0.692506 0.852792 3976 3978 chr12 80448375 80454445 chr12:80448375-80454445:-:L1PA3:REF 10 - L1PA3 REF full-length PTPRQ 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.421875 0.345833 0.41358 0.414118 0.409524 0.46281 0.460993 0.463768 0.38172 0.488095 3977 3979 chr12 80461876 80468017 chr12:80461876-80468017:+:L1PA3:REF 12 + L1PA3 REF full-length PTPRQ 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.636244 0.365556 0.684932 0.640682 0.652146 0.548957 0.00778547 0.613757 0.660842 0.666667 0.660637 0.689594 3978 3980 chr12 80477525 80483539 chr12:80477525-80483539:+:L1PA3:REF 12 + L1PA3 REF full-length PTPRQ 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0589789 0.810651 0.970676 0.98014 0.945111 0.764613 0.0136364 0.00961538 0.988484 0.987795 0.957084 0.895661 3979 3981 chr12 81056342 81062394 chr12:81056342-81062394:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.83476 0.655605 0.623418 0.690974 0.792308 0.135084 0.00953678 0.621491 0.950474 0.629032 0.591522 0.927856 3980 3982 chr12 83299449 83305871 chr12:83299449-83305871:+:L1PA7:REF 11 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.85 0.0185185 0.364286 0.290323 0.144578 0.123711 0.492754 0.902439 0.5 0.551724 1.0 3981 3983 chr12 83549114 83555262 chr12:83549114-83555262:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898438 0.0593047 0.650655 0.583893 0.67706 0.250923 0.00974026 0.547558 0.965517 0.641026 0.523585 0.92381 3982 3984 chr12 83584266 83590245 chr12:83584266-83590245:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.792405 0.341719 0.620531 0.603704 0.347407 0.0803419 0.00644122 0.33037 0.954545 0.661499 0.390625 0.921283 3983 3985 chr12 83870970 83874655 chr12:83870970-83874655:+:L1P1:REF 11 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.930507 0.734064 0.954925 0.918527 0.785774 0.666176 0.0144472 0.00368155 0.990865 0.949825 0.823049 3984 3986 chr12 84005904 84011930 chr12:84005904-84011930:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.804462 0.557654 0.8738 0.84275 0.653032 0.672078 0.00522648 0.744186 0.893258 0.821293 0.721338 0.92126 3985 3987 chr12 85312419 85318459 chr12:85312419-85318459:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.036179 0.810248 0.776777 0.770317 0.625192 0.962605 0.00920598 0.57335 0.978079 0.826217 0.967025 0.880237 3986 3988 chr12 85785425 85791541 chr12:85785425-85791541:+:L1PA5:REF 12 + L1PA5 REF full-length RASSF9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883576 0.325806 0.735417 0.751947 0.964664 0.965116 0.00498753 0.675676 0.982869 0.841699 0.973684 0.930612 3987 3989 chr12 86061070 86064253 chr12:86061070-86064253:+:L1PA7:REF 8 + L1PA7 REF 3prime-truncated MGAT4C 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,HEK293 0.888889 0.025 0.45 0.689394 0.785714 0.0 0.731707 0.555556 3988 3990 chr12 86686177 86690757 chr12:86686177-86690757:-:L1PA8:REF 12 - L1PA8 REF 3prime-truncated MGAT4C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.823713 0.0856698 0.617605 0.949304 0.753957 0.962099 0.0138889 0.685579 0.984979 0.944272 0.933099 0.952247 3989 3991 chr12 86763875 86770022 chr12:86763875-86770022:+:L1PA3:REF 12 + L1PA3 REF full-length MGAT4C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910217 0.398216 0.633824 0.89622 0.766816 0.922156 0.00833333 0.492308 0.975806 0.884021 0.843058 0.950178 3990 3992 chr12 86970395 86976516 chr12:86970395-86976516:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.89011 0.096882 0.363196 0.85131 0.662607 0.947107 0.00860585 0.567708 0.960486 0.662996 0.559748 0.939462 3991 3993 chr12 87098406 87104423 chr12:87098406-87104423:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908571 0.741935 0.740828 0.957931 0.895274 0.955641 0.0199366 0.691481 0.986672 0.937288 0.879848 0.963724 3992 3994 chr12 87393951 87400055 chr12:87393951-87400055:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.935211 0.367673 0.624633 0.94328 0.761803 0.955947 0.0333333 0.97377 0.973684 0.855 0.828338 0.964286 3993 3995 chr12 87700677 87700894 chr12:87700677-87700894:-:L1PA4:REF 8 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HEK293 0.4875 0.409465 0.600639 0.85 0.581731 0.00982318 0.810526 0.717647 3994 3996 chr12 88465064 88467375 chr12:88465064-88467375:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.789969 0.746867 0.852725 0.852691 0.808889 0.616105 0.117043 0.828846 0.849802 0.90625 0.834087 0.897727 3995 3997 chr12 88708857 88714885 chr12:88708857-88714885:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0613787 0.796162 0.963306 0.902818 0.819402 0.913715 0.0900853 0.967294 0.984022 0.9029 0.936217 0.949618 3996 3998 chr12 88846991 88853008 chr12:88846991-88853008:+:L1PA3:REF 2 + L1PA3 REF full-length MRC5,IMR90 0.919897 0.943775 3997 3999 chr12 90536603 90542635 chr12:90536603-90542635:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0885668 0.76426 0.910048 0.976665 0.845962 0.847245 0.0176656 0.896574 0.980611 0.961874 0.875061 0.933555 3998 4000 chr12 92313998 92320023 chr12:92313998-92320023:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.629753 0.779427 0.900867 0.861857 0.851801 0.841683 0.821377 0.942519 0.965224 0.941489 0.918269 0.944075 3999 4001 chr12 92678206 92684347 chr12:92678206-92684347:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.75924 0.626009 0.669679 0.758478 0.748325 0.564706 0.0306243 0.792978 0.804854 0.741791 0.716763 0.761574 4000 4002 chr12 94389499 94395161 chr12:94389499-94395161:+:L1PA6:REF 1 + L1PA6 REF 3prime-truncated CEP83 MRC5 0.0155039 4001 4003 chr12 95923545 95929565 chr12:95923545-95929565:-:L1PA3:REF 12 - L1PA3 REF full-length CCDC38 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.904472 0.789243 0.691228 0.84265 0.74248 0.75219 0.0127796 0.886829 0.963805 0.823529 0.8887 0.918958 4002 4004 chr12 96315942 96321971 chr12:96315942-96321971:+:L1PA2:REF 12 + L1PA2 REF full-length CDK17 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0693833 0.939378 0.865985 0.846125 0.0077135 0.332332 0.00536673 0.00724638 0.0121873 0.731047 0.0161744 0.262032 4003 4005 chr12 96518775 96518777 chr12:96518775-96518777:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip1828,1KGP:L1_umary_LINE1_2344,Philippe:EXP_ID_0323 CFAP54 MCF7 0.99093 Rodriguez-Martin_2020:8 4004 4006 chr12 96723682 96729837 chr12:96723682-96729837:-:L1PA3:REF 12 - L1PA3 REF full-length CFAP54 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.507372 0.870576 0.847945 0.875346 0.615258 0.759651 0.00765697 0.928826 0.922909 0.906145 0.926584 0.862374 4005 4007 chr12 97349408 97355558 chr12:97349408-97355558:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91644 0.729012 0.54849 0.605007 0.367153 0.16318 0.00459137 0.966608 0.329382 0.71374 0.699213 0.865204 4006 4008 chr12 97603217 97609364 chr12:97603217-97609364:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.792754 0.634557 0.541872 0.61993 0.581295 0.571831 0.0141176 0.670168 0.649485 0.641509 0.678431 0.828729 4007 4009 chr12 97651133 97657167 chr12:97651133-97657167:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.672332 0.618856 0.546287 0.615924 0.182635 0.255652 0.00733496 0.540842 0.418023 0.522124 0.60517 0.938429 4008 4010 chr12 97672579 97675451 chr12:97672579-97675451:+:L1PA6:REF 1 + L1PA6 REF 3prime-truncated MRC5 0.421053 4009 4011 chr12 97723839 97729872 chr12:97723839-97729872:+:L1PA3:REF 12 + L1PA3 REF full-length LOC643711 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.712882 0.854005 0.714822 0.81353 0.540235 0.68901 0.0352941 0.934366 0.829535 0.845855 0.794924 0.853686 4010 4012 chr12 99185443 99191844 chr12:99185443-99191844:+:L1PA7:REF 10 + L1PA7 REF full-length ANKS1B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.404255 0.024 0.402299 0.205508 0.00649351 0.0 0.0 0.0962567 0.417391 0.33908 4011 4013 chr12 99237939 99244029 chr12:99237939-99244029:+:L1PA6:REF 12 + L1PA6 REF full-length ANKS1B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.532468 0.00909091 0.179775 0.169291 0.0 0.0263158 0.0166667 0.666667 0.0526316 0.0392157 0.161616 0.846154 4012 4014 chr12 99315677 99321808 chr12:99315677-99321808:-:L1PA5:REF 12 - L1PA5 REF full-length ANKS1B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.625 0.0545455 0.4875 0.383234 0.176471 0.116667 0.0333333 0.697368 0.546875 0.461538 0.551724 0.863636 4013 4015 chr12 99463307 99469450 chr12:99463307-99469450:+:L1PA3:REF 12 + L1PA3 REF full-length ANKS1B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856813 0.437065 0.754915 0.666157 0.588353 0.600998 0.00943396 0.948117 0.723973 0.701205 0.948505 0.89886 4014 4016 chr12 99740600 99740977 chr12:99740600-99740977:+:L1P3:REF 4 + L1P3 REF 3prime-truncated ANKS1B 2102Ep,MRC5,IMR90,HEK293 0.9 0.443299 0.52381 0.5 4015 4017 chr12 100636823 100642967 chr12:100636823-100642967:-:L1PA4:REF 12 - L1PA4 REF full-length GAS2L3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.876238 0.907378 0.953092 0.970771 0.705167 0.662295 0.0719603 0.961326 0.97541 0.96648 0.879279 0.953782 4016 4018 chr12 101146043 101152064 chr12:101146043-101152064:+:L1HS:REF 12 + L1HS REF full-length SLC5A8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0440387 0.866343 0.841689 0.943016 0.787599 0.755294 0.0133136 0.945794 0.971545 0.868421 0.952984 0.777778 4017 4019 chr12 102307781 102313768 chr12:102307781-102313768:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0533151 0.830963 0.900524 0.900704 0.774426 0.690909 0.212233 0.915633 0.893824 0.856745 0.920354 0.910816 4018 4020 chr12 102827177 102833208 chr12:102827177-102833208:-:L1PA2:REF 12 - L1PA2 REF full-length LINC00485 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.214103 0.0100137 0.779481 0.741935 0.643709 0.708293 0.0328325 0.815102 0.878371 0.760112 0.912583 0.814493 4019 4021 chr12 103424373 103425684 chr12:103424373-103425684:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated C12orf42 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.839329 0.427027 0.26747 0.332139 0.20944 0.048583 0.0 0.848361 0.235849 0.381579 0.471795 0.835227 4020 4022 chr12 103434388 103440411 chr12:103434388-103440411:+:L1PA2:REF 8 + L1PA2 REF full-length C12orf42 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.163743 0.211429 0.59306 0.0772947 0.233766 0.111888 0.727273 0.777778 4021 4023 chr12 103485168 103490087 chr12:103485168-103490087:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated C12orf42 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.859854 0.554945 0.453552 0.491031 0.381241 0.233716 0.0130293 0.905109 0.670819 0.443137 0.739209 0.888136 4022 4024 chr12 103608441 103613835 chr12:103608441-103613835:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated STAB2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.8988 0.498665 0.705449 0.830755 0.562032 0.490307 0.0049054 0.964347 0.896034 0.677983 0.907332 0.846506 4023 4025 chr12 104878332 104884474 chr12:104878332-104884474:-:L1PA5:REF 12 - L1PA5 REF full-length SLC41A2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923858 0.950147 0.878698 0.879865 0.868182 0.980263 0.0905797 0.946309 0.970395 0.88 0.968391 0.926966 4024 4026 chr12 105245853 105251970 chr12:105245853-105251970:+:L1PA4:REF 10 + L1PA4 REF full-length APPL2 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293,H1 0.885167 0.902256 0.986842 0.97619 0.896907 0.337662 0.571429 0.965517 0.864407 0.948052 4025 4027 chr12 105628261 105634450 chr12:105628261-105634450:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.114082 0.873563 0.852537 0.849193 0.852138 0.830538 0.0728209 0.945918 0.907105 0.80493 0.949434 0.673591 4026 4028 chr12 105776064 105782085 chr12:105776064-105782085:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.694862 0.645765 0.919298 0.903266 0.922433 0.921897 0.0462671 0.65776 0.939091 0.917921 0.960325 0.961464 4027 4029 chr12 106465469 106471598 chr12:106465469-106471598:-:L1PA7:REF 11 - L1PA7 REF full-length POLR3B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.894737 0.982143 0.972973 0.562874 1.0 1.0 1.0 1.0 1.0 0.962963 0.955556 4028 4030 chr12 106471865 106477891 chr12:106471865-106477891:-:L1PA2:REF 10 - L1PA2 REF full-length POLR3B 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.0430622 0.873737 0.908491 0.646018 0.983651 0.842723 0.817391 0.956876 0.793388 0.911602 4029 4031 chr12 108996947 109000000 chr12:108996947-109000000:+:L1HS:REF 12 + L1HS REF 3prime-truncated SVOP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.104456 0.91761 0.840415 0.861151 0.808803 0.83767 0.0169794 0.960149 0.946037 0.860504 0.910474 0.7725 4030 4032 chr12 111829162 111835315 chr12:111829162-111835315:-:L1PA3:REF 9 - L1PA3 REF full-length MAPKAPK5-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.846154 0.932692 0.831325 0.878906 0.330275 0.666667 0.648352 0.807339 0.869565 4031 4033 chr12 112621197 112627228 chr12:112621197-112627228:+:L1PA2:REF 12 + L1PA2 REF full-length RPH3A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.158746 0.917359 0.726788 0.68936 0.763724 0.758048 0.0707577 0.926883 0.939274 0.70437 0.815315 0.694724 4032 4034 chr12 112954595 112959481 chr12:112954595-112959481:-:L1PA5:REF 5 - L1PA5 REF 3prime-truncated OAS3 2102Ep,BJ,MRC5,HEK293T,K562 0.525 0.78 0.407843 0.114094 0.0444444 4033 4035 chr12 115285122 115291136 chr12:115285122-115291136:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.662147 0.909242 0.942857 0.870362 0.89139 0.778261 0.0732087 0.902913 0.812997 0.91922 0.942529 0.937598 4034 4036 chr12 117376640 117376642 chr12:117376640-117376642:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip1883,1KGP:L1_umary_LINE1_2365,Philippe:EXP_ID_0329 MRC5,HEK293 0.815238 0.970803 Beck_2010:107.0 Gardner_2017:1,Rodriguez-Martin_2020:9,Scott_2016:2 4035 4037 chr12 117623232 117629334 chr12:117623232-117629334:-:L1PA6:REF 1 - L1PA6 REF full-length KSR2 MRC5 0.25 4036 4038 chr12 119104817 119110953 chr12:119104817-119110953:-:L1PA5:REF 11 - L1PA5 REF full-length SRRM4 2102Ep,HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.857143 0.516385 0.682959 0.157159 0.215539 0.00724638 0.446058 0.696646 0.671186 0.631008 0.946667 4037 4039 chr12 119532438 119538554 chr12:119532438-119538554:-:L1PA7:REF 11 - L1PA7 REF full-length CCDC60 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.882143 0.0380623 0.429333 0.406118 0.0754717 0.0174825 0.00540541 0.406162 0.466667 0.439141 0.830601 4038 4040 chr12 126299023 126305038 chr12:126299023-126305038:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.123995 0.818182 0.893241 0.853004 0.664071 0.722727 0.011893 0.533333 0.92926 0.843391 0.795918 0.977778 Brouha_2003:2.3 4039 4041 chr12 126318381 126318383 chr12:126318381-126318383:-:L1HS:NONREF 4 - L1HS KNR euL1db:mrip1907,1KGP:L1_umary_LINE1_2369,Philippe:EXP_ID_0334 HepG2,HEK293T,HCT116,HEK293 0.748996 0.572115 0.893564 0.773196 Beck_2010:1.0 4040 4042 chr12 126320655 126326787 chr12:126320655-126326787:-:L1PA6:REF 3 - L1PA6 REF full-length 2102Ep,MRC5,HEK293T 0.938776 0.808824 0.152174 4041 4043 chr12 127094605 127100631 chr12:127094605-127100631:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.786724 0.738962 0.884159 0.727018 0.343505 0.60841 0.844588 0.339296 0.134615 0.768376 0.767246 0.919759 4042 4044 chr12 127865855 127871882 chr12:127865855-127871882:+:L1PA3:REF 9 + L1PA3 REF full-length LINC02393 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.973856 0.644444 0.752 0.763672 0.532164 0.577778 0.787879 0.626866 0.763889 4043 4045 chr12 128491850 128497975 chr12:128491850-128497975:-:L1PA5:REF 12 - L1PA5 REF full-length TMEM132C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.82933 0.286307 0.584973 0.59638 0.205832 0.215909 0.0142045 0.161871 0.678068 0.614786 0.450249 0.928251 4044 4046 chr12 129037558 129043695 chr12:129037558-129043695:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.900726 0.456382 0.593356 0.726361 0.435096 0.387273 0.00708215 0.202296 0.690476 0.737265 0.722309 0.784916 4045 4047 chr12 129800701 129806706 chr12:129800701-129806706:+:L1PA3:REF 5 + L1PA3 REF full-length TMEM132D 2102Ep,BJ,MRC5,HEK293T,MCF7 0.897527 0.8125 0.7792 0.318841 0.624113 4046 4048 chr12 133244941 133251091 chr12:133244941-133251091:+:L1PA4:REF 12 + L1PA4 REF full-length ANHX 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.820346 0.0301508 0.698718 0.789575 0.0291262 0.00387597 0.0 0.291815 0.845304 0.8 0.5625 0.868421 4047 4049 chr13 18503477 18509621 chr13:18503477-18509621:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.789655 0.21 0.651255 0.665939 0.260536 0.461417 0.013624 0.218589 0.315615 0.637532 0.410194 0.833333 4048 4050 chr13 18983770 18989849 chr13:18983770-18989849:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.745763 0.181818 0.298851 0.276836 0.0410959 0.0294118 0.134615 0.746835 0.0864198 0.363636 0.384615 0.595238 4049 4051 chr13 19103712 19109724 chr13:19103712-19109724:-:L1PA2:REF 12 - L1PA2 REF full-length LOC107984132 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0545455 0.0146767 0.524572 0.606765 0.227735 0.582067 0.0629669 0.543164 0.838899 0.581366 0.793074 0.922306 4050 4052 chr13 19212824 19216873 chr13:19212824-19216873:-:L1P1:REF 8 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,MCF7,HCT116,IMR90,HEK293 0.790323 0.304636 0.541667 0.615551 0.740741 0.666667 0.614458 0.670455 4051 4053 chr13 19272995 19279012 chr13:19272995-19279012:+:L1PA2:REF 11 + L1PA2 REF full-length ANKRD26P3 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.335772 0.334783 0.353583 0.353659 0.704441 0.00936037 0.26557 0.421536 0.42234 0.352941 0.435659 4052 4054 chr13 19496786 19500000 chr13:19496786-19500000:+:L1HS:REF 12 + L1HS REF 3prime-truncated TPTE2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.107228 0.730019 0.703072 0.784787 0.614048 0.743494 0.117435 0.642497 0.836218 0.860632 0.818441 0.762431 4053 4055 chr13 19611546 19617890 chr13:19611546-19617890:-:L1PA5:REF 2 - L1PA5 REF full-length 2102Ep,MRC5 0.883333 0.820896 4054 4056 chr13 21855728 21861909 chr13:21855728-21861909:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.894737 0.195417 0.643519 0.803649 0.841754 0.382284 0.0127462 0.550514 0.907437 0.757716 0.912611 0.950966 4055 4057 chr13 22313827 22316900 chr13:22313827-22316900:-:L1P3:REF 12 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.822086 0.020316 0.365854 0.405263 0.410112 0.0512821 0.00662252 0.238095 0.896861 0.422535 0.551136 0.850467 4056 4058 chr13 22574736 22580850 chr13:22574736-22580850:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.424161 0.768461 0.815951 0.831373 0.90835 0.66548 0.00932401 0.786575 0.977099 0.860681 0.953003 0.95 4057 4059 chr13 23282871 23286072 chr13:23282871-23286072:-:L1P3:REF 7 - L1P3 REF 3prime-truncated SGCG 2102Ep,HepG2,MRC5,HEK293T,HCT116,IMR90,HEK293 0.666667 0.047619 0.385057 0.354167 0.568182 0.351852 0.424242 4058 4060 chr13 24806647 24812668 chr13:24806647-24812668:-:L1PA3:REF 10 - L1PA3 REF full-length RNF17 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.692308 0.734043 0.810811 0.842576 0.977011 0.151292 0.963855 0.791667 0.975369 0.978723 4059 4061 chr13 25893048 25899177 chr13:25893048-25899177:-:L1PA4:REF 7 - L1PA4 REF full-length ATP8A2 BJ,HEK293T,HeLaS3,K562,HCT116,HEK293,H1 0.698795 0.755682 0.393333 0.0105263 0.793696 0.773973 0.986111 4060 4062 chr13 26102953 26103848 chr13:26102953-26103848:+:L1P3:REF 10 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.888889 0.25 0.423077 0.655172 0.464286 0.05 0.652174 0.0444444 0.708333 0.815789 4061 4063 chr13 27125486 27126431 chr13:27125486-27126431:+:L1P2:REF 7 + L1P2 REF 3prime-truncated USP12 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116 0.842697 0.947761 0.984127 0.598248 0.017341 0.0 0.988827 4062 4064 chr13 28688077 28694338 chr13:28688077-28694338:-:L1PA7:REF 10 - L1PA7 REF full-length SLC46A3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90 0.2 0.0277778 0.7 0.933824 0.5 0.6 0.0555556 0.1875 0.958333 0.846154 4063 4065 chr13 28775212 28777334 chr13:28775212-28777334:-:L1PA8:REF 1 - L1PA8 REF 3prime-truncated MRC5 0.727273 4064 4066 chr13 29214185 29216814 chr13:29214185-29216814:-:L1P3:REF 10 - L1P3 REF 3prime-truncated MTUS2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.892473 0.00862069 0.478261 0.494152 0.3 0.0 0.315789 0.419643 0.225 0.864865 4065 4067 chr13 29641706 29647706 chr13:29641706-29647706:-:L1HS:REF 7 - L1HS REF full-length LOC102723345 2102Ep,HepG2,HeLaS3,MCF7,HCT116,IMR90,H1 0.0644403 0.0279605 0.746741 0.00853485 0.972263 0.562118 0.104305 Brouha_2003:0.0,Sanchez-Luque_2019:115.0,Sanchez-Luque_2019:15.0,Sanchez-Luque_2019:2.0 Sanchez-Luque_2019:1 4066 4068 chr13 30259358 30265382 chr13:30259358-30265382:+:L1PA3:REF 1 + L1PA3 REF full-length KATNAL1 HeLaS3 0.851003 4067 4069 chr13 31302314 31308370 chr13:31302314-31308370:+:L1HS:REF 12 + L1HS REF full-length B3GLCT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.663014 0.921533 0.896036 0.90991 0.894737 0.893525 0.69625 0.900879 0.909196 0.894977 0.905303 0.910394 4068 4070 chr13 32602092 32608174 chr13:32602092-32608174:-:L1PA5:REF 1 - L1PA5 REF full-length PDS5B MRC5 0.495238 4069 4071 chr13 33417969 33424106 chr13:33417969-33424106:+:L1PA6:REF 12 + L1PA6 REF full-length STARD13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.936 0.92926 0.821782 0.975758 0.856436 0.675 0.0 0.916667 0.983051 0.873563 0.947368 0.990196 4070 4072 chr13 33984674 33990692 chr13:33984674-33990692:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909091 0.979885 0.945017 0.919419 0.899027 0.952 0.0133843 0.970633 0.987813 0.854522 0.971066 0.962773 4071 4073 chr13 34054229 34055239 chr13:34054229-34055239:-:L1PA8:REF 2 - L1PA8 REF 3prime-truncated MRC5,HEK293 0.852941 0.939394 4072 4074 chr13 34480262 34486294 chr13:34480262-34486294:-:L1HS:REF 12 - L1HS REF full-length LINC02343 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.400212 0.871817 0.923638 0.941992 0.957332 0.909002 0.0120482 0.973568 0.967985 0.891892 0.963803 0.964187 4073 4075 chr13 35213627 35213629 chr13:35213627-35213629:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip1971 NBEA MRC5 0.9295 4074 4076 chr13 35422150 35428282 chr13:35422150-35428282:-:L1PA4:REF 12 - L1PA4 REF full-length NBEA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.796504 0.708627 0.923462 0.861064 0.926705 0.853828 0.0233281 0.957299 0.918258 0.839196 0.96401 0.890208 4075 4077 chr13 36008229 36014237 chr13:36008229-36014237:-:L1PA2:REF 11 - L1PA2 REF full-length DCLK1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.234375 0.787654 0.861423 0.853992 0.951282 0.758427 0.932384 0.876607 0.836538 0.932292 0.912371 4076 4078 chr13 37149952 37155982 chr13:37149952-37155982:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.131894 0.0614035 0.968586 0.977989 0.00704225 0.854626 0.0412371 0.573356 0.901141 0.953488 0.771704 0.949153 4077 4079 chr13 37250340 37256381 chr13:37250340-37256381:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.236511 0.874214 0.94288 0.941059 0.87687 0.728223 0.042029 0.870694 0.87846 0.906934 0.901557 0.888245 4078 4080 chr13 37822274 37828299 chr13:37822274-37828299:-:L1PA3:REF 7 - L1PA3 REF full-length TRPC4 HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90 0.844106 0.852349 0.864097 0.801075 0.512397 0.630769 0.928177 4079 4081 chr13 38065372 38071518 chr13:38065372-38071518:+:L1PA3:REF 12 + L1PA3 REF full-length LINC00571 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.913934 0.821752 0.90758 0.843315 0.867804 0.701493 0.0702836 0.417178 0.760346 0.83557 0.882968 0.955381 4080 4082 chr13 38112136 38118185 chr13:38112136-38118185:+:L1PA3:REF 11 + L1PA3 REF full-length LINC00571 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.893258 0.760859 0.821065 0.926523 0.7921 0.160133 0.823666 0.899901 0.770833 0.846402 0.859155 4081 4083 chr13 38837794 38840413 chr13:38837794-38840413:-:L1P3:REF 4 - L1P3 REF 3prime-truncated FREM2 HepG2,BJ,MRC5,HCT116 0.104167 0.464286 0.52381 0.113402 4082 4084 chr13 39000817 39006875 chr13:39000817-39006875:-:L1PA2:REF 12 - L1PA2 REF full-length PROSER1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.137056 0.330295 0.961428 0.972077 0.942837 0.968386 0.947059 0.957646 0.983107 0.966499 0.966301 0.85813 4083 4085 chr13 40356290 40362321 chr13:40356290-40362321:+:L1PA2:REF 12 + L1PA2 REF full-length LINC00598 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.651408 0.918689 0.879339 0.711707 0.915919 0.895149 0.0327869 0.960145 0.960621 0.78828 0.972574 0.8 4084 4086 chr13 40711139 40713316 chr13:40711139-40713316:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909091 0.890511 0.913978 0.928571 0.931034 0.742857 0.338235 0.974026 0.972222 0.921569 0.936842 0.886792 4085 4087 chr13 40734919 40740945 chr13:40734919-40740945:+:L1PA2:REF 12 + L1PA2 REF full-length MRPS31 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.336082 0.896657 0.8842 0.98116 0.966135 0.910714 0.951402 0.975799 0.95514 0.974937 0.974041 0.686722 4086 4088 chr13 40828819 40834834 chr13:40828819-40834834:+:L1PA2:REF 12 + L1PA2 REF full-length TPTE2P5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.789272 0.964811 0.950156 0.954847 0.953878 0.825959 0.526316 0.964384 0.903061 0.952527 0.968792 0.968504 4087 4089 chr13 40864571 40870598 chr13:40864571-40870598:-:L1PA3:REF 10 - L1PA3 REF full-length TPTE2P5 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293,H1 0.55 0.707424 0.65625 0.967422 0.930435 0.0508475 0.957447 0.858044 0.96124 0.669492 4088 4090 chr13 41042308 41048414 chr13:41042308-41048414:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.949686 0.944882 0.978328 0.942701 0.912037 0.995833 0.964 0.988584 0.921212 0.95625 0.938843 0.886792 4089 4091 chr13 41474356 41480738 chr13:41474356-41480738:-:L1PA7:REF 12 - L1PA7 REF full-length RGCC 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.884817 0.532407 0.827957 0.938303 0.775819 0.565714 0.0683761 0.975845 0.96 0.879781 0.820128 0.96875 4090 4092 chr13 42424880 42430912 chr13:42424880-42430912:+:L1PA2:REF 12 + L1PA2 REF full-length LINC02341 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.21275 0.821971 0.80411 0.832653 0.834612 0.786624 0.0659415 0.876858 0.898783 0.842635 0.911475 0.867993 4091 4093 chr13 43971705 43976214 chr13:43971705-43976214:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.296233 0.911437 0.858559 0.923703 0.942431 0.887387 0.0253317 0.953065 0.973193 0.958333 0.888484 0.908654 4092 4094 chr13 45635171 45641629 chr13:45635171-45641629:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872727 0.105263 0.56962 0.679487 0.670103 0.333333 0.0 0.881579 0.963636 0.413793 0.913462 0.93617 4093 4095 chr13 45645030 45651067 chr13:45645030-45651067:+:L1PA2:REF 8 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,HEK293 0.344156 0.908745 0.835897 0.816701 0.396624 0.911111 0.899225 0.906716 4094 4096 chr13 45664064 45670213 chr13:45664064-45670213:-:L1PA3:REF 8 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,HEK293 0.592857 0.400468 0.884615 0.80872 0.309524 0.536082 0.946341 0.95122 4095 4097 chr13 47712138 47718308 chr13:47712138-47718308:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.809264 0.443644 0.687591 0.861423 0.289575 0.933333 0.0204082 0.2711 0.443775 0.647569 0.69403 0.86964 4096 4098 chr13 47734791 47740890 chr13:47734791-47740890:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.552381 0.223108 0.536398 0.670989 0.0310559 0.748148 0.0 0.0444444 0.0842105 0.416149 0.0600858 0.864865 4097 4099 chr13 47781888 47787912 chr13:47781888-47787912:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.372856 0.907861 0.870788 0.921285 0.831604 0.864626 0.00711549 0.91401 0.950321 0.883969 0.94514 0.944966 4098 4100 chr13 48416129 48422515 chr13:48416129-48422515:+:L1PA7:REF 12 + L1PA7 REF full-length RB1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.931655 0.980456 0.973896 0.986829 0.947368 0.995122 0.964912 0.989831 0.986842 0.991489 0.989717 0.975962 4099 4101 chr13 48465555 48471566 chr13:48465555-48471566:+:L1HS:REF 12 + L1HS REF full-length RB1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.48494 0.983454 0.986143 0.987627 0.975904 0.986188 0.973619 0.980247 0.981707 0.973481 0.982961 0.962422 4100 4102 chr13 48673458 48676111 chr13:48673458-48676111:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated CYSLTR2 MRC5 0.464286 4101 4103 chr13 49152513 49158535 chr13:49152513-49158535:-:L1PA2:REF 12 - L1PA2 REF full-length FNDC3A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.781648 0.914815 0.951578 0.922404 0.937092 0.981481 0.869099 0.906837 0.912204 0.908057 0.940786 0.850209 4102 4104 chr13 49879091 49880687 chr13:49879091-49880687:+:L1PA8:REF 7 + L1PA8 REF 3prime-truncated CTAGE10P HepG2,BJ,MRC5,HEK293T,HCT116,IMR90,HEK293 0.00917431 0.0 0.0447761 0.0 0.0652174 0.025 0.0181818 4103 4105 chr13 50180295 50186330 chr13:50180295-50186330:-:L1PA2:REF 12 - L1PA2 REF full-length DLEU1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.187699 0.0142857 0.932412 0.978338 0.00890208 0.928058 0.00281955 0.00702811 0.016835 0.959184 0.976419 0.78481 4104 4106 chr13 50503044 50509169 chr13:50503044-50509169:-:L1PA4:REF 6 - L1PA4 REF full-length DLEU1 2102Ep,MRC5,HEK293T,MCF7,IMR90,HEK293 1.0 0.977556 0.961183 0.974545 0.981481 0.954545 4105 4107 chr13 50768288 50774405 chr13:50768288-50774405:-:L1PA6:REF 1 - L1PA6 REF full-length DLEU7 MRC5 0.25 4106 4108 chr13 50982054 50988070 chr13:50982054-50988070:+:L1PA2:REF 12 + L1PA2 REF full-length GUCY1B2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.14743 0.908257 0.91396 0.954617 0.941723 0.871921 0.822188 0.924357 0.974892 0.854022 0.967183 0.847826 4107 4109 chr13 51078923 51080846 chr13:51078923-51080846:-:L1PA6:REF 9 - L1PA6 REF 3prime-truncated C13orf42 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.385366 0.670984 0.820961 0.836009 0.338235 0.132841 0.198582 0.796407 0.807882 4108 4110 chr13 51509717 51515838 chr13:51509717-51515838:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905707 0.887892 0.824627 0.953657 0.886667 0.803797 0.629902 0.406998 0.96696 0.968 0.957082 0.966245 4109 4111 chr13 51690196 51696329 chr13:51690196-51696329:-:L1PA3:REF 12 - L1PA3 REF full-length WDFY2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.928571 0.966933 0.98963 0.97491 0.935351 0.876404 0.873518 0.208748 0.927614 0.993135 0.977931 0.989101 4110 4112 chr13 52254319 52258039 chr13:52254319-52258039:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.92875 0.944851 0.849239 0.854719 0.927719 0.785093 0.729708 0.923221 0.981461 0.881664 0.961515 0.964809 4111 4113 chr13 52269640 52275659 chr13:52269640-52275659:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.127002 0.891857 0.8585 0.899781 0.921951 0.862454 0.786962 0.970588 0.984645 0.885417 0.949195 0.540505 4112 4114 chr13 52548432 52552151 chr13:52548432-52552151:-:L1P1:REF 12 - L1P1 REF 3prime-truncated TPTE2P3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.932878 0.911991 0.873708 0.879957 0.951203 0.926362 0.776177 0.162002 0.975258 0.917391 0.971948 0.96807 4113 4115 chr13 54218991 54225025 chr13:54218991-54225025:+:L1PA5:REF 9 + L1PA5 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.784091 0.739583 0.744737 0.9375 0.363636 0.025 0.884615 0.882353 0.866279 4114 4116 chr13 54572234 54573121 chr13:54572234-54573121:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.397638 0.793578 0.682353 0.829766 0.183246 0.678519 0.0592593 0.700965 0.762821 0.830144 0.875 0.255319 4115 4117 chr13 55272543 55278710 chr13:55272543-55278710:-:L1PA5:REF 10 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.733333 0.015625 0.2 0.132948 0.579545 0.04 0.0 0.0126582 0.222222 0.167939 4116 4118 chr13 56762844 56769351 chr13:56762844-56769351:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.791667 0.0714286 0.268293 0.222222 0.259259 0.0384615 0.0526316 0.5 0.0454545 0.272727 0.111111 0.84 4117 4119 chr13 57229644 57236064 chr13:57229644-57236064:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.782609 0.0 0.258065 0.075188 0.538462 0.0 0.0 0.26087 0.130435 0.114286 0.333333 0.869565 4118 4120 chr13 58350399 58352698 chr13:58350399-58352698:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911628 0.779379 0.705718 0.714857 0.935532 0.403475 0.018018 0.963687 0.835509 0.863372 0.871064 0.95572 4119 4121 chr13 58672617 58678643 chr13:58672617-58678643:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.602198 0.772808 0.804903 0.858917 0.918681 0.838407 0.0117994 0.960184 0.868056 0.866667 0.868672 0.962389 4120 4122 chr13 60245895 60252051 chr13:60245895-60252051:-:L1PA3:REF 7 - L1PA3 REF full-length LINC00434 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.80597 0.809689 0.8 0.807114 0.84 0.90566 0.819444 4121 4123 chr13 60709752 60715784 chr13:60709752-60715784:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.76 0.458367 0.491435 0.572515 0.800223 0.162437 0.00821018 0.328622 0.372204 0.531178 0.731586 0.923507 4122 4124 chr13 60888196 60888202 chr13:60888196-60888202:-:L1HS:NONREF 9 - L1HS KNR euL1db:mrip2041,1KGP:L1_umary_LINE1_2422,Philippe:EXP_ID_0354 2102Ep,HepG2,MRC5,HEK293T,K562,MCF7,HCT116,HEK293,H1 0.0736434 0.889807 0.835576 0.919767 0.0409511 0.732283 0.980848 0.904501 0.92246 Rodriguez-Martin_2020:50,Tubio_2014:16 4123 4125 chr13 61627110 61629440 chr13:61627110-61629440:-:L1PA6:REF 6 - L1PA6 REF 3prime-truncated HepG2,BJ,MRC5,HeLaS3,IMR90,HEK293 0.535088 0.431373 0.558376 0.136364 0.52381 0.680556 4124 4126 chr13 64211031 64217178 chr13:64211031-64217178:-:L1PA5:REF 11 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.850909 0.0663717 0.436187 0.817132 0.324503 0.0457746 0.609375 0.95053 0.701068 0.40381 0.673139 4125 4127 chr13 66253762 66259788 chr13:66253762-66259788:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.943277 0.767315 0.896825 0.965698 0.963056 0.88655 0.33434 0.955862 0.970052 0.933248 0.960443 0.983302 4126 4128 chr13 66737482 66743507 chr13:66737482-66743507:+:L1PA2:REF 9 + L1PA2 REF full-length PCDH9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293 0.666667 0.873786 0.842424 0.96789 0.958239 0.952703 0.958115 0.908537 0.96371 4127 4129 chr13 67452274 67456207 chr13:67452274-67456207:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.795455 0.0528053 0.12782 0.476793 0.815642 0.257143 0.164286 0.818182 0.916667 0.521739 0.772222 0.848214 4128 4130 chr13 67685594 67686288 chr13:67685594-67686288:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.14042 0.81874 0.814529 0.90816 0.962446 0.802176 0.32981 0.976549 0.981503 0.907003 0.910317 0.943794 4129 4131 chr13 69477866 69483990 chr13:69477866-69483990:-:L1PA5:REF 8 - L1PA5 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293 0.151515 0.33125 0.414286 0.57385 0.277778 0.0238095 0.691729 0.4 4130 4132 chr13 69782179 69784882 chr13:69782179-69784882:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated KLHL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901408 0.681481 0.635101 0.765716 0.917233 0.363369 0.0884649 0.77474 0.898975 0.712944 0.750388 0.961471 4131 4133 chr13 71384560 71390704 chr13:71384560-71390704:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910082 0.22808 0.93611 0.891969 0.349885 0.012605 0.00769231 0.97593 0.84765 0.930825 0.956392 4132 4134 chr13 72265482 72271624 chr13:72265482-72271624:-:L1PA4:REF 8 - L1PA4 REF full-length HepG2,BJ,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.901361 0.723796 0.905199 0.778125 0.887872 0.711409 0.748344 0.965 4133 4135 chr13 72610246 72616287 chr13:72610246-72616287:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.439531 0.72075 0.766781 0.851654 0.966719 0.511356 0.00872324 0.641602 0.879301 0.842932 0.912352 0.962796 4134 4136 chr13 73640527 73646551 chr13:73640527-73646551:+:L1PA2:REF 6 + L1PA2 REF full-length HepG2,MRC5,HEK293T,HeLaS3,HCT116,H1 0.872832 0.93808 0.872146 0.959732 0.954064 0.87395 4135 4137 chr13 74039068 74039070 chr13:74039068-74039070:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip2078,1KGP:L1_umary_LINE1_2451,Philippe:EXP_ID_0361 KLF12 HepG2 0.947587 4136 4138 chr13 74235944 74241970 chr13:74235944-74241970:-:L1PA3:REF 12 - L1PA3 REF full-length LINC00402 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.200358 0.92679 0.938748 0.989516 0.977891 0.721174 0.0229885 0.950935 0.979633 0.98374 0.976562 0.987097 4137 4139 chr13 74426326 74432354 chr13:74426326-74432354:+:L1HS:REF 12 + L1HS REF full-length LINC00381 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.418269 0.801786 0.797297 0.926523 0.876331 0.804233 0.0131332 0.925072 0.858407 0.902256 0.890309 0.900826 4138 4140 chr13 74536448 74542369 chr13:74536448-74542369:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.825655 0.641987 0.726257 0.816936 0.815441 0.647355 0.0139296 0.786294 0.820126 0.821296 0.784024 0.887269 4139 4141 chr13 75241169 75247314 chr13:75241169-75247314:-:L1PA4:REF 12 - L1PA4 REF full-length LINC01078 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.888889 0.619367 0.761281 0.911879 0.814159 0.478735 0.0726447 0.875 0.903978 0.931224 0.891059 0.930926 4140 4142 chr13 75727624 75733777 chr13:75727624-75733777:-:L1PA3:REF 12 - L1PA3 REF full-length LMO7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.822191 0.942801 0.986121 0.979853 0.947266 0.961728 0.276808 0.962631 0.965854 0.984756 0.978605 0.961484 4141 4143 chr13 76242877 76243950 chr13:76242877-76243950:+:L1P1:REF 11 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.838384 0.452482 0.746753 0.954023 0.275766 0.00520833 0.0898876 0.755556 0.901961 0.6 0.928315 4142 4144 chr13 76342318 76344149 chr13:76342318-76344149:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856631 0.212579 0.682759 0.931891 0.704499 0.216393 0.0 0.190217 0.716024 0.824658 0.677966 0.923404 4143 4145 chr13 76612823 76618851 chr13:76612823-76618851:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.218782 0.763373 0.865179 0.911381 0.930476 0.719072 0.0181818 0.589623 0.819241 0.931072 0.890212 0.947674 Rodriguez-Martin_2020:0,Tubio_2014:1 4144 4146 chr13 77199027 77205061 chr13:77199027-77205061:+:L1PA3:REF 12 + L1PA3 REF full-length MYCBP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.952229 0.969828 0.981717 0.981395 0.969817 0.975376 0.971671 0.776298 0.979938 0.947059 0.979321 0.972077 4145 4147 chr13 78513206 78519393 chr13:78513206-78519393:-:L1PA3:REF 12 - L1PA3 REF full-length RNF219-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886454 0.786848 0.752106 0.803762 0.878472 0.374312 0.0979532 0.57362 0.84186 0.754023 0.716444 0.861728 4146 4148 chr13 78526071 78532199 chr13:78526071-78532199:+:L1PA5:REF 10 + L1PA5 REF full-length RNF219-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293,H1 0.836957 0.0294118 0.277778 0.194986 0.786765 0.0666667 0.224638 0.354167 0.487685 0.897436 4147 4149 chr13 78865884 78867218 chr13:78865884-78867218:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.75 0.343023 0.243902 0.21371 0.87963 0.0103093 0.0 0.0 0.0633803 0.327586 0.294521 0.770833 4148 4150 chr13 79817055 79823218 chr13:79817055-79823218:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.833499 0.690981 0.907338 0.967527 0.896907 0.792148 0.0268022 0.84051 0.931317 0.904459 0.92596 0.904378 4149 4151 chr13 79839668 79845817 chr13:79839668-79845817:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.837975 0.786251 0.882496 0.895266 0.851802 0.794811 0.0293725 0.717241 0.930048 0.891021 0.894539 4150 4152 chr13 79957808 79959548 chr13:79957808-79959548:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.173913 0.235294 0.08 0.142857 0.125 0.037037 0.04 0.222222 0.166667 0.142857 0.12 0.333333 4151 4153 chr13 80151905 80153647 chr13:80151905-80153647:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.928144 0.867456 0.970469 0.979012 0.82056 0.838037 0.0196759 0.982265 0.971125 0.990099 0.98547 0.953704 4152 4154 chr13 80516861 80522982 chr13:80516861-80522982:+:L1PA6:REF 9 + L1PA6 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.029703 0.261905 0.306667 0.270833 0.031746 0.0 0.166667 0.266667 0.392157 4153 4155 chr13 80707860 80708582 chr13:80707860-80708582:-:L1P1:REF 10 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293,H1 0.902174 0.432458 0.664585 0.710767 0.686188 0.407942 0.00620767 0.71567 0.731425 0.775168 4154 4156 chr13 81064093 81070238 chr13:81064093-81070238:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.647059 0.529412 0.598361 0.659384 0.897561 0.6 0.0134529 0.808181 0.96281 0.677632 0.83432 0.853439 4155 4157 chr13 82045349 82051380 chr13:82045349-82051380:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.689759 0.759268 0.775684 0.785505 0.889355 0.924387 0.0344234 0.940179 0.972973 0.804223 0.789169 0.959685 4156 4158 chr13 82229018 82235152 chr13:82229018-82235152:+:L1PA3:REF 7 + L1PA3 REF full-length HepG2,BJ,MRC5,HEK293T,HCT116,IMR90,HEK293 0.464286 0.608333 0.599251 0.762749 0.959677 0.598361 0.605714 4157 4159 chr13 83171180 83175035 chr13:83171180-83175035:+:L1P2:REF 3 + L1P2 REF 3prime-truncated HepG2,MRC5,K562 0.14433 0.933333 0.09375 4158 4160 chr13 83754136 83757401 chr13:83754136-83757401:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.855124 0.0594595 0.399123 0.382292 0.327891 0.581395 0.00696864 0.91411 0.963446 0.417085 0.458667 0.839378 4159 4161 chr13 85123204 85129221 chr13:85123204-85129221:+:L1PA2:REF 12 + L1PA2 REF full-length LINC00375 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.684947 0.635371 0.866713 0.927492 0.876171 0.807091 0.00994036 0.975721 0.926749 0.88986 0.937226 0.960474 4160 4162 chr13 85911792 85917919 chr13:85911792-85917919:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856655 0.178359 0.61743 0.74575 0.815004 0.727473 0.0252366 0.488889 0.907317 0.792642 0.584775 0.923664 4161 4163 chr13 89087885 89093918 chr13:89087885-89093918:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.129017 0.779389 0.81557 0.884717 0.658879 0.897864 0.0376117 0.795263 0.987476 0.879573 0.91629 0.949619 4162 4164 chr13 90663982 90669995 chr13:90663982-90669995:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.55443 0.808176 0.845079 0.843354 0.885193 0.741028 0.0427632 0.949749 0.97518 0.844881 0.860274 0.971963 4163 4165 chr13 92685561 92691592 chr13:92685561-92691592:-:L1HS:REF 12 - L1HS REF full-length GPC5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.281732 0.779381 0.815515 0.80669 0.916428 0.873611 0.0197368 0.837 0.885929 0.865922 0.875551 0.917796 4164 4166 chr13 92752475 92758488 chr13:92752475-92758488:+:L1PA3:REF 12 + L1PA3 REF full-length GPC5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.457606 0.927103 0.888258 0.955823 0.948893 0.886003 0.0375 0.289634 0.879191 0.957543 0.933511 0.943487 4165 4167 chr13 93490518 93496537 chr13:93490518-93496537:-:L1PA2:REF 10 - L1PA2 REF full-length GPC6 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.467316 0.985981 0.922269 0.950204 0.634881 0.0184544 0.581137 0.884929 0.98374 0.900215 4166 4168 chr13 94372199 94378191 chr13:94372199-94378191:+:L1PA3:REF 12 + L1PA3 REF full-length GPC6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.177264 0.969918 0.934132 0.9734 0.954729 0.668189 0.0566502 0.913655 0.805584 0.972145 0.965517 0.859848 4167 4169 chr13 96326180 96332208 chr13:96326180-96332208:-:L1PA4:REF 12 - L1PA4 REF full-length HS6ST3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.187135 0.698103 0.732051 0.685049 0.46034 0.688736 0.0144377 0.955908 0.820231 0.741199 0.937824 0.903605 4168 4170 chr13 97592979 97595999 chr13:97592979-97595999:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.65625 0.0121951 0.226415 0.333333 0.0487805 0.03125 0.0 0.294118 0.6 0.342857 0.645833 0.875 4169 4171 chr13 97607659 97613767 chr13:97607659-97613767:+:L1PA3:REF 3 + L1PA3 REF full-length MRC5,K562,HCT116 0.815385 0.0 0.971014 4170 4172 chr13 97667408 97673440 chr13:97667408-97673440:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.267442 0.826938 0.827303 0.887679 0.900459 0.74359 0.0210868 0.960838 0.951095 0.858561 0.901628 0.909984 4171 4173 chr13 97730412 97736443 chr13:97730412-97736443:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.966507 0.776882 0.834783 0.867779 0.916084 0.748792 0.0570175 0.962567 0.957105 0.883333 0.965714 0.972028 4172 4174 chr13 100698082 100704117 chr13:100698082-100704117:+:L1PA2:REF 12 + L1PA2 REF full-length NALCN-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.389694 0.770874 0.785572 0.867875 0.866397 0.652268 0.442733 0.892809 0.891519 0.851604 0.884498 0.839763 4173 4175 chr13 102522020 102528176 chr13:102522020-102528176:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895966 0.424707 0.49656 0.610588 0.258806 0.406302 0.00411523 0.171642 0.678212 0.525641 0.737279 0.909584 4174 4176 chr13 104340349 104346508 chr13:104340349-104346508:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918169 0.493865 0.767089 0.892314 0.61931 0.651075 0.0161692 0.898897 0.983175 0.896774 0.883244 0.972136 4175 4177 chr13 105382665 105383251 chr13:105382665-105383251:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.497396 0.723461 0.836565 0.967238 0.850785 0.908072 0.00859107 0.850993 0.925971 0.91196 0.949728 0.937322 4176 4178 chr13 106213540 106219555 chr13:106213540-106219555:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.129584 0.801483 0.969486 0.98399 0.91133 0.824561 0.0146056 0.937057 0.407703 0.966942 0.963235 0.934307 4177 4179 chr13 106778245 106784404 chr13:106778245-106784404:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87726 0.694737 0.569026 0.836149 0.892678 0.545078 0.0105871 0.369081 0.831391 0.837981 0.940195 0.946701 4178 4180 chr13 106929331 106935363 chr13:106929331-106935363:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.426509 0.901196 0.895415 0.91808 0.965898 0.80756 0.0197433 0.987437 0.921525 0.940594 0.964095 0.97327 4179 4181 chr13 107920656 107926706 chr13:107920656-107926706:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.113565 0.186454 0.377426 0.46526 0.246612 0.139327 0.0827907 0.939365 0.437448 0.485173 0.417769 0.588631 4180 4182 chr13 108510472 108516495 chr13:108510472-108516495:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.11293 0.831415 0.824394 0.867862 0.621324 0.787484 0.757679 0.947548 0.895314 0.880126 0.909866 0.845316 4181 4183 chr13 109827662 109829507 chr13:109827662-109829507:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated MRC5 0.0 4182 4184 chr14 18283818 18289864 chr14:18283818-18289864:-:L1HS:REF 5 - L1HS REF full-length 2102Ep,BJ,MRC5,HeLaS3,MCF7 0.0637255 0.72449 0.697266 0.536 0.455128 4183 4185 chr14 20230574 20236301 chr14:20230574-20236301:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated OR11H7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.256948 0.683091 0.838594 0.891537 0.541514 0.879542 0.966091 0.864187 0.848865 0.891332 0.867824 0.844168 4184 4186 chr14 20910598 20916745 chr14:20910598-20916745:+:L1PA3:REF 11 + L1PA3 REF full-length ECRP 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.874101 0.815058 0.734579 0.764 0.900488 0.0129032 0.930843 0.911717 0.729032 0.885567 0.922141 4185 4187 chr14 21690008 21690241 chr14:21690008-21690241:+:L1P3:REF 8 + L1P3 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116 0.440758 0.568182 0.717241 0.775 0.211538 0.0 0.720588 0.852941 4186 4188 chr14 21760073 21766285 chr14:21760073-21766285:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.853035 0.0320197 0.0871369 0.231818 0.44164 0.0125 0.0 0.344978 0.150183 0.168067 0.583333 0.723881 4187 4189 chr14 22348921 22355065 chr14:22348921-22355065:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.826772 0.266921 0.532982 0.649583 0.678501 0.382609 0.043956 0.582734 0.42 0.6 0.700288 0.892857 4188 4190 chr14 22615641 22621763 chr14:22615641-22621763:-:L1PA4:REF 12 - L1PA4 REF full-length ABHD4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.935683 0.737207 0.956439 0.970141 0.953235 0.971609 0.654062 0.959357 0.971223 0.979927 0.950226 0.953271 4189 4191 chr14 24491435 24497569 chr14:24491435-24497569:+:L1PA5:REF 9 + L1PA5 REF full-length LOC101927045 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90 0.727273 0.27027 0.458333 0.646789 0.542056 0.194444 0.0574713 0.466667 0.636364 4190 4192 chr14 24523704 24523706 chr14:24523704-24523706:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip2219,Philippe:EXP_ID_0387 MCF7 0.787611 Rodriguez-Martin_2020:4 4191 4193 chr14 24525954 24532097 chr14:24525954-24532097:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.386441 0.0841709 0.465565 0.645075 0.399276 0.121951 0.025974 0.410999 0.835575 0.584527 0.894434 0.850649 4192 4194 chr14 24948620 24948622 chr14:24948620-24948622:-:L1HS:NONREF 1 - L1HS KNR Philippe:EXP_ID_0388 STXBP6 HeLaS3 0.582609 4193 4195 chr14 25136427 25138236 chr14:25136427-25138236:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.8 0.138889 0.726316 0.631148 0.333333 0.0440252 0.0163934 0.398964 0.276978 0.659091 0.612565 0.906977 4194 4196 chr14 25167086 25173204 chr14:25167086-25173204:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.698765 0.231541 0.486598 0.508961 0.323944 0.0536398 0.00396825 0.29156 0.516704 0.57377 0.509186 0.755725 4195 4197 chr14 25183427 25189539 chr14:25183427-25189539:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.634831 0.0316973 0.46114 0.462916 0.097852 0.0398551 0.012605 0.119186 0.475504 0.374046 0.260388 0.727811 4196 4198 chr14 25207166 25210563 chr14:25207166-25210563:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.20339 0.918692 0.828402 0.862847 0.57619 0.684211 0.0160772 0.822626 0.843612 0.882507 0.963415 0.954545 4197 4199 chr14 25367219 25370680 chr14:25367219-25370680:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.810976 0.4 0.433255 0.446746 0.169675 0.124611 0.0236686 0.33002 0.404475 0.44843 0.34507 0.865672 4198 4200 chr14 25580747 25586334 chr14:25580747-25586334:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.846491 0.332547 0.549398 0.626437 0.282123 0.093985 0.0 0.703072 0.739645 0.539683 0.533058 0.917241 4199 4201 chr14 25771319 25777467 chr14:25771319-25777467:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.708995 0.35609 0.58296 0.610204 0.556283 0.491841 0.0220126 0.545455 0.822642 0.621622 0.660317 0.934211 4200 4202 chr14 25778863 25784872 chr14:25778863-25784872:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.269279 0.661096 0.810388 0.786982 0.839878 0.592251 0.0230292 0.926975 0.912736 0.78198 0.953577 4201 4203 chr14 26106423 26112430 chr14:26106423-26112430:+:L1PA3:REF 2 + L1PA3 REF full-length HepG2,MRC5 0.568627 0.594203 4202 4204 chr14 26629268 26635299 chr14:26629268-26635299:-:L1PA2:REF 12 - L1PA2 REF full-length LINC02588 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.141531 0.74073 0.872877 0.771026 0.853944 0.853117 0.0739372 0.798119 0.896366 0.826642 0.814897 0.820342 4203 4205 chr14 26673315 26679374 chr14:26673315-26679374:-:L1PA2:REF 12 - L1PA2 REF full-length LINC02588 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0370732 0.701045 0.793854 0.832435 0.881463 0.928125 0.0282638 0.305532 0.970268 0.818792 0.836222 0.950266 4204 4206 chr14 27357544 27363655 chr14:27357544-27363655:-:L1PA5:REF 12 - L1PA5 REF full-length LOC728755 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.77764 0.0374927 0.448546 0.327458 0.272436 0.433498 0.018315 0.497997 0.756219 0.474576 0.161435 0.852321 4205 4207 chr14 27673059 27679095 chr14:27673059-27679095:+:L1PA3:REF 11 + L1PA3 REF full-length LOC728755 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.0109409 0.602273 0.758865 0.820896 0.0466667 0.880682 0.769886 0.957447 0.751323 0.823256 0.67474 4206 4208 chr14 28188442 28194470 chr14:28188442-28194470:+:L1PA2:REF 2 + L1PA2 REF full-length HepG2,MRC5 0.742515 0.776224 4207 4209 chr14 28312502 28318523 chr14:28312502-28318523:-:L1PA2:REF 6 - L1PA2 REF full-length HepG2,BJ,MRC5,HEK293T,MCF7,HCT116 0.857362 0.833333 0.834146 0.267241 0.131868 0.975207 4208 4210 chr14 29413756 29415137 chr14:29413756-29415137:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.565217 0.546286 0.882812 0.765013 0.935103 0.408654 0.00851064 0.234483 0.744792 0.925234 0.828947 0.947917 4209 4211 chr14 29889261 29889487 chr14:29889261-29889487:+:L1P2:REF 12 + L1P2 REF 3prime-truncated PRKD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.61 0.127907 0.974576 0.967391 0.902985 0.0238095 0.0 0.835443 0.337209 1.0 0.966216 0.909091 4210 4212 chr14 30363537 30369568 chr14:30363537-30369568:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0703282 0.813154 0.84976 0.864407 0.570138 0.826303 0.00969163 0.920757 0.412899 0.889619 0.95082 0.836529 4211 4213 chr14 30404508 30410867 chr14:30404508-30410867:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.977778 0.527027 0.245283 0.34375 0.792453 0.0 1.0 0.777778 0.26087 0.194444 0.767442 0.758621 4212 4214 chr14 30474044 30480062 chr14:30474044-30480062:+:L1PA3:REF 12 + L1PA3 REF full-length G2E3-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0551425 0.783008 0.803382 0.849904 0.905746 0.532564 0.021573 0.710323 0.916227 0.839019 0.962403 0.950454 4213 4215 chr14 30681601 30681603 chr14:30681601-30681603:-:L1HS:NONREF 4 - L1HS KNR euL1db:mrip2249,1KGP:L1_umary_LINE1_2530,Philippe:EXP_ID_0391 SCFD1 BJ,HEK293T,IMR90,HEK293 0.951087 0.0058309 0.95614 0.976825 Rodriguez-Martin_2020:16,Tubio_2014:10 4214 4216 chr14 30684809 30690837 chr14:30684809-30690837:-:L1HS:REF 12 - L1HS REF full-length SCFD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.032688 0.0111401 0.7552 0.456322 0.00800188 0.957292 0.967554 0.475066 0.95114 0.445233 0.0143541 0.235056 Rodriguez-Martin_2020:1 4215 4217 chr14 31634089 31640236 chr14:31634089-31640236:-:L1PA3:REF 1 - L1PA3 REF full-length NUBPL MRC5 0.810606 4216 4218 chr14 31666562 31669003 chr14:31666562-31669003:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated NUBPL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.785714 0.937759 0.801802 0.750853 0.804878 0.946667 0.238095 0.916667 0.965116 0.707692 0.757895 0.939394 4217 4219 chr14 32234597 32240754 chr14:32234597-32240754:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.944923 0.633999 0.903346 0.887183 0.908881 0.868293 0.106776 0.939236 0.984825 0.75 0.969925 0.960317 4218 4220 chr14 32581230 32584128 chr14:32581230-32584128:-:L1P1:REF 12 - L1P1 REF 3prime-truncated AKAP6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.957944 0.644458 0.927536 0.867752 0.868256 0.645161 0.0283019 0.951368 0.904421 0.834416 0.921569 0.976064 4219 4221 chr14 32851160 32857308 chr14:32851160-32857308:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.736232 0.168771 0.481348 0.41316 0.515588 0.0964567 0.00634249 0.695513 0.33137 0.53317 0.494681 0.864865 4220 4222 chr14 33088061 33094126 chr14:33088061-33094126:+:L1PA5:REF 12 + L1PA5 REF full-length NPAS3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.84898 0.408408 0.618557 0.575949 0.761092 0.165644 0.0163043 0.744939 0.633858 0.5625 0.834225 0.881481 4221 4223 chr14 34139340 34142492 chr14:34139340-34142492:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.676471 0.693548 0.65625 0.415254 0.763158 0.2 0.166667 0.615385 0.95082 0.75 0.75 0.964286 4222 4224 chr14 34150072 34156225 chr14:34150072-34156225:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.829323 0.630324 0.719332 0.702902 0.874267 0.833898 0.253552 0.900081 0.846693 0.711806 0.913081 0.937574 4223 4225 chr14 34391213 34397659 chr14:34391213-34397659:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.925 0.0917874 0.625 0.780347 0.921739 0.973684 0.0178571 0.956522 0.941176 0.794118 0.941176 0.944444 4224 4226 chr14 34797695 34798554 chr14:34797695-34798554:+:L1P2:REF 1 + L1P2 REF 3prime-truncated BAZ1A HepG2 0.901639 4225 4227 chr14 36142656 36148690 chr14:36142656-36148690:-:L1PA3:REF 7 - L1PA3 REF full-length LINC00609 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7 0.785714 0.413174 0.728814 0.698198 0.892473 0.545455 0.738462 4226 4228 chr14 36184549 36190694 chr14:36184549-36190694:+:L1PA3:REF 12 + L1PA3 REF full-length PTCSC3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929698 0.540493 0.764643 0.878049 0.948529 0.878876 0.0451895 0.886976 0.977739 0.815068 0.949681 0.949937 4227 4229 chr14 36411728 36417842 chr14:36411728-36417842:+:L1PA6:REF 10 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.6 0.489286 0.714286 0.696629 0.787879 0.529412 0.037037 0.836957 0.732143 0.859375 4228 4230 chr14 36693923 36700082 chr14:36693923-36700082:-:L1PA6:REF 12 - L1PA6 REF full-length SLC25A21 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.683908 0.400283 0.595238 0.792779 0.95279 0.813793 0.948718 0.946502 0.942222 0.660606 0.959276 0.903614 4229 4231 chr14 37187765 37193961 chr14:37187765-37193961:+:L1PA6:REF 12 + L1PA6 REF full-length MIPOL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.793478 0.520231 0.739726 0.914815 0.976744 0.589744 0.846154 0.965909 0.986486 0.911504 0.968992 0.757576 4230 4232 chr14 37293328 37299451 chr14:37293328-37299451:+:L1PA4:REF 12 + L1PA4 REF full-length MIPOL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901235 0.986345 0.962366 0.975676 0.973684 0.991071 0.925532 0.966146 0.983957 0.951691 0.977848 0.974576 4231 4233 chr14 37350918 37356933 chr14:37350918-37356933:-:L1PA2:REF 12 - L1PA2 REF full-length MIPOL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.628956 0.863649 0.885255 0.908633 0.829111 0.87434 0.734043 0.824479 0.879642 0.865014 0.836538 0.828722 4232 4234 chr14 37361875 37364273 chr14:37361875-37364273:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated MIPOL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.855219 0.961415 0.706587 0.927894 0.920844 0.899083 0.497382 0.965217 0.984615 0.890411 0.978417 0.932099 4233 4235 chr14 37766796 37772831 chr14:37766796-37772831:-:L1PA3:REF 12 - L1PA3 REF full-length TTC6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0815775 0.979296 0.788771 0.887832 0.615739 0.83452 0.0398887 0.941274 0.965723 0.85139 0.909668 0.88809 4234 4236 chr14 37780642 37786767 chr14:37780642-37786767:-:L1PA7:REF 3 - L1PA7 REF full-length TTC6 2102Ep,HepG2,MRC5 0.469388 1.0 0.859259 4235 4237 chr14 38263372 38269414 chr14:38263372-38269414:-:L1P3:REF 11 - L1P3 REF full-length CLEC14A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.857143 0.0423077 0.719298 0.921162 0.0684932 0.924242 0.789474 0.508475 0.929412 0.257143 0.867925 4236 4238 chr14 38634947 38640984 chr14:38634947-38640984:+:L1PA3:REF 3 + L1PA3 REF full-length HepG2,MRC5,HEK293T 0.820628 0.881579 0.485714 4237 4239 chr14 38975192 38981648 chr14:38975192-38981648:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.858628 0.202403 0.679245 0.543823 0.225446 0.447273 0.00320513 0.843333 0.889098 0.605042 0.574176 0.880795 4238 4240 chr14 39017171 39023327 chr14:39017171-39023327:+:L1PA4:REF 12 + L1PA4 REF full-length SEC23A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.291101 0.569437 0.953403 0.935496 0.906433 0.983947 0.542064 0.024602 0.973075 0.918193 0.968627 0.542398 4239 4241 chr14 39521539 39527458 chr14:39521539-39527458:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.718045 0.625 0.675573 0.738872 0.622302 0.727273 0.179688 0.794258 0.883838 0.84252 0.800971 0.886598 4240 4242 chr14 39584278 39590291 chr14:39584278-39590291:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.115083 0.802384 0.737307 0.716405 0.418374 0.732429 0.0203863 0.947885 0.986633 0.755187 0.867257 0.96563 4241 4243 chr14 39655916 39662030 chr14:39655916-39662030:+:L1PA3:REF 10 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293,H1 0.853741 0.56512 0.645161 0.686321 0.387441 0.604213 0.943375 0.774105 0.687888 0.94958 4242 4244 chr14 39697592 39703740 chr14:39697592-39703740:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.816456 0.442228 0.586131 0.685597 0.464929 0.661366 0.0177736 0.899289 0.931327 0.677868 0.708108 0.886006 4243 4245 chr14 39820033 39826163 chr14:39820033-39826163:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.805369 0.33518 0.63964 0.505025 0.317992 0.0687023 0.0 0.787097 0.965278 0.364706 0.590604 0.977099 4244 4246 chr14 40326207 40332209 chr14:40326207-40332209:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.221185 0.734818 0.713087 0.725292 0.628512 0.724928 0.0208633 0.834492 0.840293 0.759843 0.796107 0.77029 4245 4247 chr14 40348058 40354070 chr14:40348058-40354070:+:L1PA2:REF 1 + L1PA2 REF full-length MRC5 0.812903 4246 4248 chr14 40948916 40954934 chr14:40948916-40954934:-:L1PA3:REF 12 - L1PA3 REF full-length LINC02315 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0578453 0.781286 0.689053 0.796403 0.518066 0.724919 0.0194805 0.898637 0.98229 0.732452 0.793729 0.0932983 4247 4249 chr14 41209338 41215358 chr14:41209338-41215358:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.678947 0.648236 0.746214 0.726195 0.683544 0.0159363 0.783036 0.979518 0.793051 0.787317 0.962963 4248 4250 chr14 41751766 41757899 chr14:41751766-41757899:-:L1PA4:REF 12 - L1PA4 REF full-length LRFN5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910013 0.177462 0.700924 0.666438 0.271971 0.679365 0.00864553 0.941176 0.97454 0.825858 0.615137 0.949206 4249 4251 chr14 41908983 41911704 chr14:41908983-41911704:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated LRFN5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.173554 0.17754 0.729977 0.744444 0.331055 0.926714 0.0123023 0.852857 0.983095 0.762527 0.745455 0.636364 4250 4252 chr14 42956044 42959252 chr14:42956044-42959252:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.347353 0.532502 0.649536 0.800152 0.28737 0.939336 0.00809717 0.967838 0.980044 0.810578 0.717571 0.936202 4251 4253 chr14 42967511 42973555 chr14:42967511-42973555:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.322722 0.611754 0.667845 0.675456 0.405957 0.925197 0.0131579 0.932503 0.972533 0.828694 0.572152 0.972222 4252 4254 chr14 43062334 43068363 chr14:43062334-43068363:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.164546 0.457027 0.713321 0.78089 0.0518962 0.90991 0.0322034 0.726253 0.981707 0.807047 0.705138 0.901592 4253 4255 chr14 43262062 43268079 chr14:43262062-43268079:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.605405 0.557528 0.582638 0.685555 0.510116 0.879386 0.0239234 0.969156 0.986622 0.66967 0.641646 0.93865 4254 4256 chr14 43370269 43376295 chr14:43370269-43376295:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0774103 0.771591 0.781734 0.781947 0.60813 0.93956 0.0165017 0.926 0.980296 0.868114 0.903654 0.954631 4255 4257 chr14 43492185 43498201 chr14:43492185-43498201:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.290795 0.862261 0.707531 0.823815 0.479467 0.898069 0.0111663 0.975657 0.986425 0.794007 0.862041 0.961456 4256 4258 chr14 43597900 43602088 chr14:43597900-43602088:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.190476 0.713665 0.687789 0.738992 0.551476 0.812037 0.0163807 0.854803 0.97505 0.794534 0.753063 0.901488 4257 4259 chr14 43698653 43704668 chr14:43698653-43704668:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.211144 0.790457 0.746961 0.841477 0.422278 0.93916 0.024369 0.974478 0.981434 0.829787 0.819063 0.943856 4258 4260 chr14 44551550 44557792 chr14:44551550-44557792:-:L1PA4:REF 7 - L1PA4 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HEK293 0.685039 0.548611 0.699659 0.308333 0.40404 0.0232558 0.429952 4259 4261 chr14 44705080 44711104 chr14:44705080-44711104:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.126469 0.924177 0.849915 0.885917 0.831849 0.871622 0.0400916 0.981886 0.986728 0.894373 0.893409 0.965748 4260 4262 chr14 44872059 44874088 chr14:44872059-44874088:-:L1PA7:REF 9 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.638889 0.0326087 0.395833 0.245714 0.192308 0.9 0.980769 0.51087 0.302083 4261 4263 chr14 45477110 45483169 chr14:45477110-45483169:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.2837 0.547036 0.785286 0.805755 0.446362 0.731098 0.0143184 0.695578 0.754687 0.80564 0.878359 0.888889 4262 4264 chr14 45545716 45551885 chr14:45545716-45551885:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.169176 0.203718 0.723902 0.733156 0.232574 0.401261 0.0106952 0.717172 0.975782 0.629902 0.873773 0.331226 4263 4265 chr14 45795779 45796595 chr14:45795779-45796595:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.831858 0.565278 0.681159 0.540073 0.425847 0.41018 0.0271318 0.978056 0.934091 0.575758 0.656098 0.955782 4264 4266 chr14 45883227 45889258 chr14:45883227-45889258:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.161552 0.844502 0.840635 0.81653 0.764726 0.779035 0.0229068 0.969145 0.962409 0.819268 0.858221 0.823034 4265 4267 chr14 46095420 46101548 chr14:46095420-46101548:-:L1PA4:REF 12 - L1PA4 REF full-length LINC00871 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.795102 0.442525 0.60424 0.656896 0.328178 0.344403 0.00815851 0.513683 0.917453 0.702797 0.569399 0.957143 4266 4268 chr14 46161140 46167282 chr14:46161140-46167282:-:L1PA4:REF 12 - L1PA4 REF full-length LINC00871 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.882965 0.424716 0.559417 0.461477 0.321387 0.259953 0.0117647 0.732575 0.949796 0.566667 0.567606 0.857658 4267 4269 chr14 46438182 46441591 chr14:46438182-46441591:+:L1PA7:REF 9 + L1PA7 REF 3prime-truncated LINC00871 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,HEK293,H1 0.755556 0.2 0.483333 0.596899 0.133333 0.583333 0.794872 0.404762 0.909091 4268 4270 chr14 46508563 46514741 chr14:46508563-46514741:+:L1PA3:REF 12 + L1PA3 REF full-length LINC00871 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.761307 0.564475 0.548744 0.608617 0.471414 0.375587 0.00630915 0.631443 0.896801 0.623832 0.744615 0.93883 4269 4271 chr14 46727484 46727758 chr14:46727484-46727758:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910173 0.649879 0.830012 0.851683 0.746403 0.744 0.0106848 0.784434 0.965479 0.831433 0.784382 0.965075 4270 4272 chr14 47171654 47177809 chr14:47171654-47177809:+:L1PA3:REF 10 + L1PA3 REF full-length MDGA2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.9 0.242009 0.633333 0.625369 0.688525 0.315789 0.595238 0.933333 0.74 0.657143 4271 4273 chr14 47377247 47383356 chr14:47377247-47383356:+:L1PA5:REF 12 + L1PA5 REF full-length MDGA2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.879713 0.174479 0.542735 0.658613 0.451923 0.0447154 0.0 0.395556 0.790224 0.761745 0.617778 0.959459 4272 4274 chr14 47901173 47907197 chr14:47901173-47907197:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.052459 0.765896 0.784431 0.865764 0.43318 0.77095 0.918919 0.957831 0.839779 0.918819 0.983333 4273 4275 chr14 48187082 48193113 chr14:48187082-48193113:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0707885 0.815728 0.683887 0.736081 0.767411 0.708136 0.0655372 0.88191 0.896715 0.802718 0.832582 0.946805 4274 4276 chr14 48366263 48372404 chr14:48366263-48372404:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.827273 0.0116959 0.10687 0.210744 0.580882 0.113924 0.0131579 0.259615 0.786885 0.287879 0.619048 0.931818 4275 4277 chr14 48606742 48612848 chr14:48606742-48612848:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.737963 0.0386572 0.406764 0.690377 0.708075 0.504146 0.0201835 0.539095 0.929062 0.54479 0.613408 0.941655 4276 4278 chr14 48702562 48702879 chr14:48702562-48702879:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.851992 0.122131 0.695225 0.801863 0.632964 0.613508 0.027027 0.764172 0.960506 0.835294 0.792181 0.950464 4277 4279 chr14 49096714 49102732 chr14:49096714-49102732:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863444 0.901661 0.717391 0.821799 0.852315 0.00595948 0.881269 0.946708 0.812102 0.950635 0.972028 4278 4280 chr14 49143957 49150141 chr14:49143957-49150141:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.791878 0.378486 0.347447 0.431526 0.632757 0.194444 0.0187668 0.373112 0.828309 0.602592 0.458491 0.82963 4279 4281 chr14 49178179 49180533 chr14:49178179-49180533:+:L1PA7:REF 11 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.315789 0.0205128 0.157143 0.0890909 0.260417 0.03 0.0 0.333333 0.183333 0.135417 0.658333 4280 4282 chr14 51794601 51800632 chr14:51794601-51800632:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.10407 0.845957 0.83377 0.964091 0.881061 0.795576 0.00965759 0.83045 0.850738 0.904881 0.892729 0.895408 4281 4283 chr14 52157773 52163865 chr14:52157773-52163865:+:L1PA6:REF 5 + L1PA6 REF full-length MRC5,HEK293T,HCT116,IMR90,HEK293 0.625 0.34375 0.725 0.55 0.45 4282 4284 chr14 52201038 52201040 chr14:52201038-52201040:-:L1HS:NONREF 8 - L1HS KNR euL1db:mrip2345,1KGP:L1_umary_LINE1_2559 2102Ep,HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,H1 0.0847458 0.829253 0.808344 0.859571 0.661538 0.0429864 0.884562 0.863333 Beck_2010:3.0 Rodriguez-Martin_2020:0,Tubio_2014:1 4283 4285 chr14 52208174 52214292 chr14:52208174-52214292:+:L1PA5:REF 2 + L1PA5 REF full-length MRC5,HEK293T 0.802469 0.584615 4284 4286 chr14 52502588 52506527 chr14:52502588-52506527:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated TXNDC16 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.941257 0.978976 0.959748 0.977223 0.979424 0.985401 0.966102 0.975 0.978391 0.957589 0.986992 0.975439 4285 4287 chr14 53084651 53090883 chr14:53084651-53090883:+:L1PA6:REF 6 + L1PA6 REF full-length DDHD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116 0.916667 0.857143 1.0 0.682243 0.9 0.933333 4286 4288 chr14 53318040 53324215 chr14:53318040-53324215:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.943396 0.843648 0.864621 0.951629 0.839404 0.458453 0.0218978 0.979684 0.976271 0.961089 0.929504 0.96063 4287 4289 chr14 53797906 53804327 chr14:53797906-53804327:+:L1PA7:REF 1 + L1PA7 REF full-length MRC5 0.00671141 4288 4290 chr14 54027690 54033829 chr14:54027690-54033829:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.817391 0.787004 0.590909 0.696049 0.748201 0.0744186 0.00740741 0.703226 0.895928 0.733333 0.813084 0.765217 4289 4291 chr14 54233877 54240023 chr14:54233877-54240023:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911315 0.799302 0.925244 0.939987 0.882957 0.588694 0.0245902 0.194774 0.677189 0.919786 0.947195 0.955357 4290 4292 chr14 55861624 55863538 chr14:55861624-55863538:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.928771 0.640227 0.899566 0.957972 0.737722 0.933857 0.0662768 0.913838 0.956839 0.888399 0.915851 0.953125 4291 4293 chr14 56014010 56020042 chr14:56014010-56020042:-:L1PA3:REF 9 - L1PA3 REF full-length 2102Ep,HepG2,BJ,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.92887 0.772917 0.838253 0.847694 0.840909 0.945631 0.857741 0.856611 0.896226 4292 4294 chr14 56441818 56447831 chr14:56441818-56447831:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.755501 0.152481 0.650566 0.332665 0.317027 0.889624 0.030867 0.915873 0.890815 0.696936 0.429255 0.937378 4293 4295 chr14 56454500 56460544 chr14:56454500-56460544:+:L1PA5:REF 1 + L1PA5 REF full-length MRC5 0.81 4294 4296 chr14 56639511 56645657 chr14:56639511-56645657:+:L1PA4:REF 11 + L1PA4 REF full-length TMEM260 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.916084 0.986486 0.96 0.966197 0.983333 0.960526 0.931818 0.97 1.0 1.0 1.0 4295 4297 chr14 56667527 56673561 chr14:56667527-56673561:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.492435 0.885928 0.77171 0.857574 0.800881 0.909938 0.517134 0.842675 0.847737 0.943213 0.818452 0.729947 4296 4298 chr14 57112210 57118214 chr14:57112210-57118214:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0456546 0.843204 0.75772 0.798491 0.585801 0.0118203 0.800936 0.0126761 0.803355 0.930726 0.195652 4297 4299 chr14 57338082 57344117 chr14:57338082-57344117:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.184739 0.894759 0.864101 0.932187 0.912495 0.815217 0.108764 0.959626 0.951299 0.890372 0.96859 0.814773 4298 4300 chr14 57513490 57519696 chr14:57513490-57519696:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.8 0.42735 0.503597 0.41807 0.42515 0.00787402 0.0 0.66055 0.304545 0.402174 0.870192 0.904762 4299 4301 chr14 58032539 58038561 chr14:58032539-58038561:+:L1PA2:REF 12 + L1PA2 REF full-length ARMH4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.10642 0.781897 0.892685 0.912577 0.922995 0.744792 0.155825 0.930061 0.94216 0.914956 0.960143 0.950704 4300 4302 chr14 58753700 58753702 chr14:58753700-58753702:+:L1HS:NONREF 4 + L1HS KNR euL1db:mrip2356,1KGP:L1_umary_LINE1_2571,Philippe:EXP_ID_0408 2102Ep,BJ,MCF7,HCT116 0.0898021 0.970287 0.975875 0.965087 Gardner_2017:3,Rodriguez-Martin_2020:347,Tubio_2014:40 4301 4303 chr14 59405820 59406386 chr14:59405820-59406386:-:L1P2:REF 2 - L1P2 REF 3prime-truncated HepG2,BJ 0.0 0.0 4302 4304 chr14 59409450 59415609 chr14:59409450-59415609:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905852 0.973684 0.787746 0.972763 0.913934 0.804428 0.428571 0.941176 0.970639 0.972527 0.940341 0.932271 4303 4305 chr14 59513180 59519328 chr14:59513180-59519328:+:L1PA4:REF 5 + L1PA4 REF full-length CCDC175 2102Ep,HepG2,MRC5,HEK293T,HCT116 0.985507 0.683333 0.923611 0.859375 0.95082 4304 4306 chr14 59946504 59952523 chr14:59946504-59952523:-:L1PA2:REF 11 - L1PA2 REF full-length LRRC9 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0632785 0.878777 0.724186 0.812901 0.850403 0.00854701 0.819259 0.974095 0.819081 0.543478 0.414716 4305 4307 chr14 59991331 59994156 chr14:59991331-59994156:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated LRRC9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896063 0.760092 0.658789 0.749066 0.851995 0.397917 0.0176211 0.891437 0.972299 0.742627 0.909667 0.866667 4306 4308 chr14 60073181 60075403 chr14:60073181-60075403:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated LRRC9 MRC5 1.0 4307 4309 chr14 60523259 60529424 chr14:60523259-60529424:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.815267 0.0237443 0.5116 0.409234 0.766878 0.190926 0.00630252 0.683411 0.955659 0.601961 0.772809 0.925373 4308 4310 chr14 60908337 60914469 chr14:60908337-60914469:-:L1PA4:REF 12 - L1PA4 REF full-length MNAT1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.904459 0.980751 0.981506 0.977139 0.939589 0.966443 0.934901 0.944313 0.979592 0.969231 0.971787 0.977778 4309 4311 chr14 61009388 61015470 chr14:61009388-61015470:-:L1PA4:REF 12 - L1PA4 REF full-length SLC38A6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.757862 0.644841 0.806723 0.983776 0.952736 0.768293 0.645833 0.983827 0.628099 0.637681 0.981685 0.782051 4310 4312 chr14 61055116 61061148 chr14:61055116-61061148:-:L1HS:REF 12 - L1HS REF full-length SLC38A6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.165737 0.984197 0.972664 0.983722 0.970311 0.972973 0.958807 0.976989 0.989983 0.971039 0.968037 0.964154 4311 4313 chr14 62045454 62051619 chr14:62045454-62051619:-:L1PA4:REF 12 - L1PA4 REF full-length SYT16 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.912485 0.310811 0.801156 0.929675 0.643508 0.528155 0.0131796 0.879052 0.655452 0.81854 0.76227 0.829091 4312 4314 chr14 62535851 62541882 chr14:62535851-62541882:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.125446 0.799061 0.805207 0.899139 0.78626 0.878307 0.020219 0.824507 0.865691 0.872297 0.793103 0.944974 4313 4315 chr14 62636558 62642711 chr14:62636558-62642711:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896033 0.792166 0.846369 0.842703 0.88851 0.926531 0.0337302 0.91342 0.842657 0.795796 0.808081 0.948889 4314 4316 chr14 63116706 63122735 chr14:63116706-63122735:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.086116 0.833752 0.83021 0.829451 0.868041 0.933556 0.0505837 0.873021 0.87156 0.887324 0.858865 0.925597 Brouha_2003:0.0 4315 4317 chr14 66026445 66032615 chr14:66026445-66032615:-:L1PA4:REF 1 - L1PA4 REF full-length MRC5 0.641975 4316 4318 chr14 66953145 66953147 chr14:66953145-66953147:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip2397,Philippe:EXP_ID_0415 GPHN MRC5,IMR90 0.83212 0.826884 4317 4319 chr14 67062673 67068092 chr14:67062673-67068092:-:L1P2:REF 12 - L1P2 REF 3prime-truncated GPHN 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.714286 0.963115 0.993056 0.941489 0.846561 0.954545 0.239726 0.566667 0.967742 0.932331 0.919283 0.9 4318 4320 chr14 67868071 67874097 chr14:67868071-67874097:+:L1PA3:REF 12 + L1PA3 REF full-length RAD51B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.945743 0.9764 0.97265 0.974242 0.964595 0.979215 0.930502 0.159467 0.975598 0.979983 0.979202 0.972399 4319 4321 chr14 68428765 68434891 chr14:68428765-68434891:-:L1PA5:REF 10 - L1PA5 REF full-length RAD51B 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.876623 0.948608 0.962828 0.911413 0.954103 0.519608 0.707692 0.942857 0.962868 0.960912 4320 4322 chr14 69415930 69422143 chr14:69415930-69422143:-:L1PA6:REF 12 - L1PA6 REF full-length SLC39A9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.956236 0.977456 0.968685 0.976139 0.933333 0.955414 0.930657 0.955665 0.96648 0.977974 0.97861 0.985366 4321 4323 chr14 70475203 70476939 chr14:70475203-70476939:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated ADAM20P1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.116969 0.962339 0.934365 0.914527 0.910047 0.900756 0.283808 0.590264 0.974129 0.908046 0.932271 0.955102 4322 4324 chr14 70501314 70507441 chr14:70501314-70507441:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871795 0.922921 0.741765 0.85209 0.439759 0.500921 0.00813008 0.957309 0.964474 0.640244 0.779528 0.961814 4323 4325 chr14 70547290 70553322 chr14:70547290-70553322:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.703291 0.970882 0.958525 0.96649 0.89419 0.896251 0.276614 0.974684 0.981441 0.934297 0.969843 0.97277 Brouha_2003:0.0 4324 4326 chr14 70731081 70731084 chr14:70731081-70731084:+:L1HS:NONREF 3 + L1HS KNR euL1db:mrip2410,1KGP:L1_umary_LINE1_2586,Philippe:EXP_ID_0418 MAP3K9 MRC5,HEK293T,HEK293 0.941134 0.893805 0.978979 Rodriguez-Martin_2020:15 4325 4327 chr14 71842964 71848996 chr14:71842964-71848996:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.163366 0.830334 0.926029 0.982935 0.776428 0.902882 0.0591716 0.127234 0.0223537 0.887624 0.81654 0.867267 4326 4328 chr14 71876511 71878824 chr14:71876511-71878824:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.881818 0.0307692 0.39 0.411483 0.0306122 0.0 0.0 0.977778 1.0 0.339286 0.333333 0.930233 4327 4329 chr14 71976262 71982313 chr14:71976262-71982313:-:L1PA3:REF 12 - L1PA3 REF full-length RGS6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.264706 0.77251 0.820981 0.777988 0.832923 0.782493 0.0101376 0.547 0.888763 0.82811 0.931075 0.864833 4328 4330 chr14 72409566 72415687 chr14:72409566-72415687:-:L1PA4:REF 4 - L1PA4 REF full-length RGS6 2102Ep,HepG2,MRC5,HCT116 0.977011 0.818182 0.802632 0.989583 4329 4331 chr14 76216188 76216190 chr14:76216188-76216190:-:L1HS:NONREF 1 - L1HS KNR Philippe:EXP_ID_0419 GPATCH2L 2102Ep 0.0560928 4330 4332 chr14 78536608 78542824 chr14:78536608-78542824:-:L1PA6:REF 12 - L1PA6 REF full-length NRXN3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.808642 0.0233333 0.213483 0.230137 0.00636943 0.0756303 0.0 0.0296296 0.159341 0.206522 0.304348 0.705128 4331 4333 chr14 79126178 79132202 chr14:79126178-79132202:-:L1PA3:REF 12 - L1PA3 REF full-length NRXN3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923939 0.56636 0.814665 0.848601 0.643869 0.473333 0.00551471 0.60557 0.728202 0.930279 0.884921 0.954608 4332 4334 chr14 79314060 79314943 chr14:79314060-79314943:+:L1HS:REF 12 + L1HS REF 3prime-truncated NRXN3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.214067 0.663812 0.82243 0.941926 0.940882 0.590457 0.00575816 0.869801 0.821272 0.963048 0.969422 0.928105 4333 4335 chr14 79767758 79773791 chr14:79767758-79773791:+:L1PA3:REF 12 + L1PA3 REF full-length NRXN3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.920844 0.75412 0.863905 0.940733 0.909154 0.633152 0.00672043 0.663725 0.745562 0.934932 0.968976 0.957746 4334 4336 chr14 80088527 80094682 chr14:80088527-80094682:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.894195 0.827725 0.892697 0.943434 0.543219 0.301706 0.0138504 0.053 0.768985 0.914286 0.674863 0.950301 4335 4337 chr14 81114165 81120190 chr14:81114165-81120190:+:L1PA3:REF 4 + L1PA3 REF full-length TSHR 2102Ep,MRC5,HEK293T,K562 0.0328638 0.830189 0.404082 0.0127389 4336 4338 chr14 81859803 81860162 chr14:81859803-81860162:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.83852 0.536059 0.791709 0.806225 0.58028 0.755509 0.041456 0.842727 0.823219 0.801552 0.790767 0.947029 4337 4339 chr14 82347549 82353568 chr14:82347549-82353568:+:L1PA2:REF 10 + L1PA2 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.368644 0.602837 0.706897 0.420875 0.478814 0.581169 0.751004 0.666667 0.747967 0.910256 4338 4340 chr14 83639298 83645330 chr14:83639298-83645330:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0669975 0.0108844 0.75188 0.855721 0.183066 0.881323 0.04 0.0591085 0.784501 0.904382 0.825613 0.840959 4339 4341 chr14 84653353 84656039 chr14:84653353-84656039:-:L1PA7:REF 11 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.822917 0.031746 0.405405 0.613546 0.0234375 0.710526 0.0326087 0.0448718 0.719626 0.933333 0.802198 4340 4342 chr14 85885595 85891616 chr14:85885595-85891616:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0933735 0.785714 0.773222 0.58452 0.814545 0.0326877 0.779422 0.779468 0.853846 0.887184 0.876611 4341 4343 chr14 86074489 86080517 chr14:86074489-86080517:-:L1PA3:REF 9 - L1PA3 REF full-length LINC02328 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.156118 0.708464 0.812977 0.753129 0.461538 0.639706 0.47851 0.712838 0.655405 4342 4344 chr14 86095934 86102041 chr14:86095934-86102041:-:L1PA3:REF 12 - L1PA3 REF full-length LINC02328 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.580182 0.516993 0.791805 0.898258 0.436388 0.626441 0.0124666 0.606705 0.790729 0.882688 0.632902 0.903723 4343 4345 chr14 86105459 86111494 chr14:86105459-86111494:-:L1PA2:REF 12 - L1PA2 REF full-length LINC02328 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.806919 0.485944 0.758511 0.902566 0.331911 0.575221 0.0213371 0.539116 0.642256 0.84573 0.698091 0.878525 4344 4346 chr14 86312232 86318377 chr14:86312232-86318377:+:L1PA3:REF 9 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,HEK293,H1 0.102679 0.85625 0.885906 0.961609 0.515723 0.754545 0.783333 0.732283 0.872727 4345 4347 chr14 86813730 86813929 chr14:86813730-86813929:-:L1PA8:REF 10 - L1PA8 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.44 0.0 0.71875 0.980769 0.0 0.0 0.0 0.208333 0.6 0.291667 4346 4348 chr14 87354740 87360855 chr14:87354740-87360855:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.928924 0.815311 0.82659 0.896013 0.581764 0.492659 0.0234261 0.497062 0.808256 0.863071 0.823613 0.960191 4347 4349 chr14 87423312 87429303 chr14:87423312-87429303:+:L1PA3:REF 8 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116 0.836538 0.651376 0.779221 0.914706 0.316239 0.158537 0.533835 0.755102 4348 4350 chr14 88455733 88461846 chr14:88455733-88461846:-:L1PA4:REF 12 - L1PA4 REF full-length PTPN21 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.945701 0.981329 0.932648 0.980127 0.933179 0.924379 0.744534 0.969476 0.979457 0.985697 0.946816 0.981667 4349 4351 chr14 90206773 90212804 chr14:90206773-90212804:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.915772 0.909783 0.785662 0.891581 0.721912 0.765799 0.135747 0.955066 0.970907 0.891459 0.938679 0.940358 4350 4352 chr14 91430864 91436893 chr14:91430864-91436893:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.652772 0.864141 0.853232 0.891071 0.869795 0.928744 0.822876 0.836214 0.910217 0.883475 0.893037 0.929755 4351 4353 chr14 91640244 91646233 chr14:91640244-91646233:-:L1PA2:REF 12 - L1PA2 REF full-length CATSPERB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.115992 0.873336 0.828448 0.853775 0.876877 0.856749 0.725561 0.94264 0.94697 0.780899 0.903248 0.736181 4352 4354 chr14 92852827 92858975 chr14:92852827-92858975:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921365 0.959805 0.837895 0.84632 0.779772 0.873449 0.511936 0.888889 0.954098 0.719008 0.875294 0.922619 4353 4355 chr14 93413032 93419170 chr14:93413032-93419170:-:L1PA3:REF 12 - L1PA3 REF full-length UNC79 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.912621 0.829196 0.84026 0.827848 0.878104 0.608 0.00897666 0.913151 0.88456 0.874587 0.93913 0.930556 4354 4356 chr14 101266199 101272227 chr14:101266199-101272227:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.759912 0.859847 0.763265 0.752 0.690283 0.661003 0.0270468 0.910286 0.802682 0.763875 0.895833 0.904926 4355 4357 chr14 105956123 105962267 chr14:105956123-105962267:-:L1PA4:REF 7 - L1PA4 REF full-length ADAM6 HepG2,BJ,MRC5,HEK293T,HCT116,IMR90,HEK293 0.0 0.214286 0.0 0.0 0.0 0.0 0.0 4356 4358 chr15 17013608 17019737 chr15:17013608-17019737:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923077 0.0365854 0.333333 0.62069 0.607143 0.263158 0.0 0.826087 0.666667 0.439024 0.862069 0.913043 4357 4359 chr15 19948218 19954369 chr15:19948218-19954369:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.683495 0.497567 0.575676 0.565245 0.109244 0.093199 0.0165975 0.280277 0.430357 0.569853 0.287356 0.854671 4358 4360 chr15 20311030 20317051 chr15:20311030-20317051:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.862559 0.827096 0.718123 0.769874 0.535036 0.655385 0.280344 0.661861 0.892345 0.75802 0.693175 0.900407 4359 4361 chr15 23714069 23720096 chr15:23714069-23720096:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0827402 0.0165289 0.732707 0.703357 0.154853 0.502113 0.0114123 0.0696151 0.669288 0.661672 0.622979 0.73678 4360 4362 chr15 26531055 26537615 chr15:26531055-26537615:+:L1PA7:REF 12 + L1PA7 REF full-length GABRB3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.75 0.036075 0.456954 0.479682 0.0140598 0.110497 0.00712589 0.428571 0.245283 0.484099 0.644231 0.788889 4361 4363 chr15 27187726 27193872 chr15:27187726-27193872:-:L1PA3:REF 12 - L1PA3 REF full-length GABRG3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.809634 0.129329 0.678841 0.641669 0.260835 0.293001 0.632366 0.278217 0.62996 0.771344 0.609744 0.92509 4362 4364 chr15 30240360 30246398 chr15:30240360-30246398:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908734 0.968395 0.765521 0.73899 0.848039 0.480138 0.0103866 0.736283 0.912847 0.829026 0.90367 0.959391 4363 4365 chr15 30775177 30781390 chr15:30775177-30781390:+:L1PA4:REF 12 + L1PA4 REF full-length LOC100288637 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.877737 0.97186 0.99216 0.822014 0.978788 0.98067 0.983122 0.969256 0.975191 0.991803 0.980237 0.986957 4364 4366 chr15 30848621 30854753 chr15:30848621-30854753:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.966184 0.532313 0.829588 0.822718 0.85049 0.845794 0.0491803 0.870833 0.954082 0.899628 0.860317 0.982759 4365 4367 chr15 31617776 31623903 chr15:31617776-31623903:-:L1PA5:REF 12 - L1PA5 REF full-length OTUD7A 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.925926 0.533333 0.740933 0.733184 0.74282 0.703883 0.0447761 0.937229 0.94292 0.781768 0.790952 0.935484 4366 4368 chr15 32045683 32051786 chr15:32045683-32051786:-:L1PA3:REF 12 - L1PA3 REF full-length LOC100288637 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.88729 0.757114 0.764264 0.75 0.958242 0.612903 0.0178218 0.920833 0.962838 0.802885 0.970516 0.935374 4367 4369 chr15 32139925 32146049 chr15:32139925-32146049:-:L1PA6:REF 12 - L1PA6 REF full-length LOC100288637 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863636 0.455253 0.482234 0.405204 0.9375 0.0677083 0.0128205 0.5625 0.944444 0.533333 0.87372 0.95098 4368 4370 chr15 32292269 32298310 chr15:32292269-32298310:+:L1PA3:REF 11 + L1PA3 REF full-length LOC100288637 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.758333 0.97181 0.711055 0.733676 0.947769 0.553806 0.0237389 0.0 0.903361 0.76607 0.970418 4369 4371 chr15 33739636 33739638 chr15:33739636-33739638:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip2544,1KGP:L1_umary_LINE1_2630,Philippe:EXP_ID_0436 RYR3 MCF7,H1 0.848259 0.80663 Beck_2010:14.0 4370 4372 chr15 33995744 33997047 chr15:33995744-33997047:+:L1P2:REF 12 + L1P2 REF 3prime-truncated AVEN 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911038 0.967001 0.974155 0.971027 0.938865 0.971429 0.0443623 0.962733 0.954902 0.982079 0.987842 0.987705 4371 4373 chr15 35385846 35391984 chr15:35385846-35391984:-:L1PA4:REF 12 - L1PA4 REF full-length DPH6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910334 0.971981 0.905405 0.976939 0.922261 0.962233 0.640429 0.850932 0.9838 0.969419 0.970149 0.957983 4372 4374 chr15 36195372 36201389 chr15:36195372-36201389:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.138381 0.792559 0.959569 0.967507 0.944228 0.753927 0.235234 0.828485 0.975645 0.931321 0.941339 0.982416 4373 4375 chr15 37319965 37325741 chr15:37319965-37325741:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.812183 0.149826 0.448649 0.4273 0.37037 0.107843 0.0124224 0.155172 0.869048 0.475904 0.483721 0.864407 4374 4376 chr15 37399471 37405476 chr15:37399471-37405476:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.660432 0.670465 0.727794 0.832555 0.859375 0.44306 0.021102 0.617778 0.918012 0.800448 0.824234 0.88191 4375 4377 chr15 37427156 37433181 chr15:37427156-37433181:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.155267 0.732908 0.765476 0.833055 0.885777 0.659847 0.0265589 0.604331 0.931223 0.878625 0.861564 0.873206 4376 4378 chr15 38119420 38125490 chr15:38119420-38125490:+:L1PA7:REF 1 + L1PA7 REF full-length MRC5 0.8 4377 4379 chr15 38136665 38142840 chr15:38136665-38142840:-:L1PA3:REF 8 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,HEK293 0.876847 0.580882 0.885135 0.95188 0.806818 0.678832 0.92674 0.936508 4378 4380 chr15 38567626 38574032 chr15:38567626-38574032:-:L1PA7:REF 12 - L1PA7 REF full-length RASGRP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.845 0.0915888 0.652681 0.673888 0.774566 0.148936 0.022293 0.944099 0.870558 0.664286 0.874552 0.919431 4379 4381 chr15 38580735 38586868 chr15:38580735-38586868:+:L1PA5:REF 1 + L1PA5 REF full-length MRC5 0.965986 4380 4382 chr15 38773619 38779712 chr15:38773619-38779712:-:L1PA6:REF 5 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HCT116 0.861111 0.0322581 0.914286 0.727273 0.959184 4381 4383 chr15 38782749 38788763 chr15:38782749-38788763:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.884289 0.723068 0.943277 0.955331 0.683081 0.780384 0.0146718 0.939271 0.943468 0.944354 0.907449 0.944559 4382 4384 chr15 39420570 39426588 chr15:39420570-39426588:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.170799 0.917114 0.966638 0.957491 0.821229 0.745985 0.0268595 0.928412 0.950972 0.958115 0.982289 0.873391 4383 4385 chr15 42246295 42252380 chr15:42246295-42252380:-:L1PA6:REF 1 - L1PA6 REF full-length TMEM87A MRC5 0.163339 4384 4386 chr15 43175700 43178014 chr15:43175700-43178014:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated TMEM62 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923715 0.969529 0.989442 0.914238 0.905229 0.990544 0.978261 0.977941 0.980366 0.989247 0.975564 0.986667 4385 4387 chr15 43649975 43656002 chr15:43649975-43656002:+:L1PA3:REF 12 + L1PA3 REF full-length PPIP5K1P1-CATSPER2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.926772 0.973971 0.963891 0.922797 0.969231 0.983319 0.957245 0.532787 0.972768 0.932432 0.972084 0.935428 4386 4388 chr15 44252034 44258049 chr15:44252034-44258049:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0962758 0.521056 0.55758 0.846208 0.0333059 0.834847 0.596057 0.909418 0.913313 0.659649 0.118168 0.352252 4387 4389 chr15 44682790 44685327 chr15:44682790-44685327:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated PATL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.747664 0.048 0.43956 0.760274 0.36 0.31 0.0864198 0.153846 0.795775 0.709677 0.458333 0.666667 4388 4390 chr15 44739238 44740551 chr15:44739238-44740551:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated TRIM69 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.835185 0.688661 0.866719 0.85654 0.790952 0.801198 0.596433 0.704809 0.776158 0.856419 0.846154 0.862816 4389 4391 chr15 46104553 46110666 chr15:46104553-46110666:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.842956 0.446169 0.787453 0.768936 0.202532 0.387402 0.0114213 0.616766 0.665768 0.770833 0.618841 0.952239 4390 4392 chr15 46536240 46542382 chr15:46536240-46542382:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856269 0.579815 0.777382 0.666395 0.502471 0.443902 0.00621118 0.117431 0.756645 0.747191 0.768635 0.939262 4391 4393 chr15 46614311 46615469 chr15:46614311-46615469:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.844059 0.729521 0.643011 0.715349 0.622108 0.62259 0.00747664 0.671569 0.848352 0.76 0.783051 0.949219 4392 4394 chr15 47165532 47171560 chr15:47165532-47171560:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90625 0.644246 0.673098 0.778835 0.48378 0.644874 0.0119581 0.568317 0.725773 0.752151 0.714539 0.956298 4393 4395 chr15 47215130 47215132 chr15:47215130-47215132:-:L1HS:NONREF 7 - L1HS KNR euL1db:mrip2588,1KGP:L1_umary_LINE1_2640,Philippe:EXP_ID_0438 SEMA6D HepG2,BJ,MRC5,HeLaS3,K562,HCT116,IMR90 0.785637 0.853162 0.965649 0.8 0.0415058 0.85208 0.928161 4394 4396 chr15 49068556 49073687 chr15:49068556-49073687:+:L1PA7:REF 7 + L1PA7 REF 3prime-truncated HepG2,BJ,MRC5,HeLaS3,K562,IMR90,HEK293 0.390244 0.818182 0.815068 0.738636 0.015625 0.796875 0.72 4395 4397 chr15 49259578 49265724 chr15:49259578-49265724:-:L1PA3:REF 11 - L1PA3 REF full-length GALK2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.946988 0.974855 0.946629 0.986251 0.973958 0.982578 0.930736 0.980237 0.960159 0.958209 0.984375 4396 4398 chr15 49354233 49360252 chr15:49354233-49360252:+:L1PA2:REF 12 + L1PA2 REF full-length FAM227B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.697874 0.866058 0.976978 0.926445 0.894056 0.939024 0.882193 0.978593 0.94141 0.903193 0.897831 0.933047 4397 4399 chr15 49395983 49402014 chr15:49395983-49402014:+:L1PA2:REF 12 + L1PA2 REF full-length FAM227B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0911824 0.482456 0.948819 0.982342 0.322716 0.969217 0.0442804 0.858716 0.971783 0.979592 0.946667 0.485944 4398 4400 chr15 49591887 49593319 chr15:49591887-49593319:-:L1P2:REF 12 - L1P2 REF 3prime-truncated FAM227B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.755621 0.157991 0.921847 0.941133 0.683871 0.924078 0.452581 0.843169 0.964389 0.942278 0.796721 0.942857 4399 4401 chr15 49778509 49784518 chr15:49778509-49784518:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890636 0.78 0.947687 0.968035 0.880878 0.969421 0.47029 0.915907 0.982278 0.978892 0.856031 0.973077 4400 4402 chr15 51031621 51037649 chr15:51031621-51037649:-:L1PA3:REF 11 - L1PA3 REF full-length MIR4713HG 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.0580609 0.00561313 0.967992 0.97561 0.0126775 0.957335 0.0124611 0.0172533 0.983936 0.963387 0.924606 4401 4403 chr15 51417216 51423246 chr15:51417216-51423246:-:L1HS:REF 12 - L1HS REF full-length GLDN 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.160082 0.889917 0.917978 0.974793 0.974359 0.922018 0.11084 0.970293 0.981763 0.95476 0.973572 0.922249 4402 4404 chr15 51551621 51551623 chr15:51551621-51551623:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip2601,1KGP:L1_umary_LINE1_2648,Philippe:EXP_ID_0440 DMXL2 IMR90 0.958549 4403 4405 chr15 51568814 51573077 chr15:51568814-51573077:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated DMXL2 MRC5 0.1 4404 4406 chr15 51590946 51597084 chr15:51590946-51597084:+:L1PA4:REF 5 + L1PA4 REF full-length DMXL2 BJ,MRC5,HeLaS3,MCF7,IMR90 0.950437 0.969058 0.944687 0.967404 0.956454 4405 4407 chr15 53135442 53141475 chr15:53135442-53141475:-:L1PA2:REF 12 - L1PA2 REF full-length LINC02490 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.572942 0.766968 0.652451 0.688359 0.462222 0.489141 0.019857 0.769458 0.791453 0.662058 0.757521 0.832827 4406 4408 chr15 53183248 53185103 chr15:53183248-53185103:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.843521 0.676301 0.52 0.586979 0.334311 0.142361 0.0114613 0.62234 0.549333 0.647619 0.595469 0.768182 4407 4409 chr15 53684199 53690229 chr15:53684199-53690229:+:L1PA3:REF 10 + L1PA3 REF full-length WDR72 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,H1 0.139013 0.697297 0.589041 0.69186 0.626866 0.526814 0.455814 0.362018 0.677419 0.865169 4408 4410 chr15 54444822 54450917 chr15:54444822-54450917:-:L1PA5:REF 12 - L1PA5 REF full-length UNC13C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.865811 0.333984 0.679501 0.679816 0.153934 0.293375 0.0135542 0.273885 0.700673 0.739377 0.583441 0.890977 4409 4411 chr15 54850725 54855879 chr15:54850725-54855879:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.170561 0.159011 0.243437 0.0437788 0.0501193 0.0201149 0.00294985 0.421875 0.0827887 0.0299625 0.0608899 0.184502 4410 4412 chr15 54871705 54877844 chr15:54871705-54877844:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.791938 0.302439 0.585366 0.560802 0.166948 0.154993 0.00619195 0.357143 0.61642 0.581761 0.672161 0.866873 4411 4413 chr15 54926081 54932099 chr15:54926081-54932099:-:L1HS:REF 11 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.228663 0.878676 0.902321 0.947524 0.912548 0.74901 0.466281 0.891892 0.822222 0.962212 0.964088 4412 4414 chr15 55063993 55069991 chr15:55063993-55069991:+:L1PA2:REF 12 + L1PA2 REF full-length LOC105370829 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.222091 0.562967 0.777889 0.785315 0.573933 0.674501 0.0158014 0.609141 0.885428 0.733189 0.860743 0.917189 4413 4415 chr15 55944021 55947593 chr15:55944021-55947593:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated NEDD4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929231 0.96 0.980226 0.979661 0.950725 0.974212 0.77027 0.934884 0.981333 0.968889 0.917391 0.992857 4414 4416 chr15 55958953 55958956 chr15:55958953-55958956:+:L1HS:NONREF 6 + L1HS KNR euL1db:mrip2620,Philippe:EXP_ID_0447 NEDD4 2102Ep,BJ,MRC5,HEK293T,MCF7,HEK293 0.0929204 0.972431 0.979952 0.00731113 0.0509383 0.969399 Philippe_2016:5.3 Rodriguez-Martin_2020:15,Tubio_2014:1 4415 4417 chr15 56134618 56140628 chr15:56134618-56140628:-:L1PA2:REF 12 - L1PA2 REF full-length RFX7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.89227 0.98076 0.986797 0.984381 0.97019 0.993886 0.970195 0.973684 0.983548 0.982477 0.980112 0.976342 4416 4418 chr15 56311143 56317177 chr15:56311143-56317177:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.121199 0.769087 0.823442 0.840515 0.856184 0.749257 0.714448 0.85503 0.900181 0.804717 0.887701 0.877633 4417 4419 chr15 56398989 56405142 chr15:56398989-56405142:+:L1PA6:REF 11 + L1PA6 REF full-length TEX9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.904762 0.960938 0.916667 0.821053 0.97619 0.928571 0.159091 0.5625 0.964286 0.929487 0.9625 4418 4420 chr15 57269391 57271723 chr15:57269391-57271723:-:L1P2:REF 12 - L1P2 REF 3prime-truncated TCF12 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.903226 0.954023 0.912281 0.984496 0.944 0.962687 0.973333 0.84 0.95045 0.936709 0.95098 0.982456 4419 4421 chr15 57809154 57815556 chr15:57809154-57815556:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.825 0.248756 0.559028 0.253682 0.90873 0.0753425 0.0 0.933333 0.817919 0.419355 0.912568 0.888235 4420 4422 chr15 58125731 58131761 chr15:58125731-58131761:+:L1PA2:REF 12 + L1PA2 REF full-length AQP9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.325093 0.830361 0.844043 0.786132 0.859979 0.611926 0.807854 0.866714 0.870363 0.854987 0.89849 0.951076 4421 4423 chr15 58193368 58199552 chr15:58193368-58199552:+:L1PA5:REF 11 + L1PA5 REF full-length AQP9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.884007 0.63785 0.8751 0.803419 0.925729 0.699571 0.784785 0.687366 0.803723 0.937358 0.953206 4422 4424 chr15 59803402 59809494 chr15:59803402-59809494:+:L1PA4:REF 10 + L1PA4 REF full-length 2102Ep,HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.313088 0.602532 0.76495 0.741563 0.715219 0.25 0.752475 0.830495 0.915989 0.639456 4423 4425 chr15 61896237 61902274 chr15:61896237-61902274:+:L1PA3:REF 12 + L1PA3 REF full-length VPS13C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.900055 0.976424 0.980041 0.982377 0.965854 0.975968 0.957862 0.983527 0.988116 0.985325 0.977186 0.985269 4424 4426 chr15 64326660 64332685 chr15:64326660-64332685:+:L1PA2:REF 12 + L1PA2 REF full-length CSNK1G1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0851852 0.952698 0.964163 0.974644 0.0994387 0.47508 0.905852 0.674969 0.971751 0.953216 0.937873 0.661677 4425 4427 chr15 66811397 66814133 chr15:66811397-66814133:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906832 0.55122 0.9375 0.945148 0.784314 0.855556 0.504348 0.747967 0.873913 0.95122 0.949275 1.0 4426 4428 chr15 67448229 67454359 chr15:67448229-67454359:-:L1PA4:REF 12 - L1PA4 REF full-length IQCH 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.913763 0.974138 0.930317 0.947157 0.942598 0.973244 0.686901 0.977885 0.973881 0.928879 0.979735 0.960199 4427 4429 chr15 69617030 69623160 chr15:69617030-69623160:-:L1PA4:REF 12 - L1PA4 REF full-length PCAT29 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.9125 0.337261 0.677143 0.671163 0.839134 0.871991 0.0133745 0.916976 0.87251 0.689895 0.938389 0.968487 4428 4430 chr15 70984634 70990781 chr15:70984634-70990781:-:L1PA3:REF 12 - L1PA3 REF full-length LRRC49 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909198 0.632935 0.961451 0.947752 0.91073 0.967742 0.0110837 0.962213 0.972466 0.969697 0.95547 0.945619 4429 4431 chr15 71174139 71180152 chr15:71174139-71180152:+:L1PA2:REF 11 + L1PA2 REF full-length THSD4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.117674 0.853251 0.98491 0.985245 0.912879 0.982496 0.17426 0.965828 0.979226 0.966656 0.932886 4430 4432 chr15 73215934 73222082 chr15:73215934-73222082:-:L1PA3:REF 12 - L1PA3 REF full-length NEO1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.942019 0.970227 0.892748 0.936772 0.941645 0.920039 0.557505 0.213832 0.974874 0.907143 0.927612 0.953416 4431 4433 chr15 73508419 73514470 chr15:73508419-73514470:-:L1PA2:REF 12 - L1PA2 REF full-length REC114 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0832981 0.94251 0.914047 0.947848 0.961309 0.849677 0.750221 0.9653 0.974284 0.938924 0.978459 0.923139 4432 4434 chr15 76013353 76019807 chr15:76013353-76019807:-:L1PA7:REF 1 - L1PA7 REF full-length NRG4 MRC5 0.315789 4433 4435 chr15 77150514 77156644 chr15:77150514-77156644:-:L1PA4:REF 12 - L1PA4 REF full-length PEAK1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.917002 0.951075 0.97721 0.98237 0.964286 0.604758 0.969173 0.011708 0.982678 0.979332 0.986658 0.972477 4434 4436 chr15 78607584 78613730 chr15:78607584-78613730:+:L1PA4:REF 9 + L1PA4 REF full-length CHRNA3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.784314 0.348485 0.564103 0.550562 0.822581 0.574074 0.910714 0.86 0.789474 4435 4437 chr15 78719832 78725853 chr15:78719832-78725853:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.860031 0.0239726 0.585565 0.842 0.609865 0.0888889 0.0639148 0.0116618 0.0178069 0.804481 0.850202 0.859649 4436 4438 chr15 79485783 79491818 chr15:79485783-79491818:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.166213 0.826733 0.80303 0.884956 0.808362 0.729306 0.315436 0.855814 0.943601 0.865724 0.916667 0.945338 4437 4439 chr15 79745087 79751113 chr15:79745087-79751113:-:L1PA3:REF 8 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,HEK293 0.83125 0.743119 0.87395 0.854015 0.804878 0.977099 0.928571 0.840491 4438 4440 chr15 80327181 80327183 chr15:80327181-80327183:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip2676,1KGP:L1_umary_LINE1_2672,Philippe:EXP_ID_0455 LINC00927 MRC5 0.924702 4439 4441 chr15 81668513 81674504 chr15:81668513-81674504:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.819142 0.482864 0.793485 0.792235 0.872167 0.491228 0.244709 0.97918 0.854497 0.809348 0.899374 0.672593 4440 4442 chr15 81697165 81703174 chr15:81697165-81703174:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.28131 0.634921 0.842222 0.78642 0.71408 0.53012 0.0508475 0.0144928 0.751592 0.832669 0.967681 0.931034 4441 4443 chr15 81730280 81736308 chr15:81730280-81736308:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.818247 0.808751 0.901961 0.904868 0.936261 0.675381 0.0275311 0.668885 0.903469 0.894472 0.92588 0.965289 4442 4444 chr15 81797930 81803963 chr15:81797930-81803963:+:L1PA2:REF 5 + L1PA2 REF full-length 2102Ep,HepG2,MRC5,HEK293T,MCF7 0.0315789 0.676806 0.848998 0.623037 0.143646 4443 4445 chr15 81870667 81876699 chr15:81870667-81876699:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.115656 0.864795 0.863118 0.918862 0.635442 0.720894 0.236805 0.561179 0.890046 0.918145 0.931566 0.6016 4444 4446 chr15 81995166 82000000 chr15:81995166-82000000:+:L1HS:REF 5 + L1HS REF 3prime-truncated 2102Ep,BJ,MRC5,HEK293T,H1 0.0191667 0.120907 0.0787589 0.158333 0.0572034 4445 4447 chr15 82882881 82888919 chr15:82882881-82888919:-:L1HS:REF 11 - L1HS REF full-length HOMER2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.239594 0.938155 0.885762 0.906538 0.965839 0.755952 0.968577 0.963303 0.918644 0.986486 0.9 Beck_2010:0.0 4446 4448 chr15 83225410 83225680 chr15:83225410-83225680:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.903603 0.0415973 0.770384 0.832985 0.802967 0.579926 0.117503 0.847039 0.875354 0.832721 0.811216 0.925587 4447 4449 chr15 83383651 83389616 chr15:83383651-83389616:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.135375 0.819462 0.922652 0.872755 0.0169396 0.89617 0.0597166 0.280399 0.954341 0.920398 0.935123 0.865957 Rodriguez-Martin_2020:0,Tubio_2014:1 4448 4450 chr15 83450804 83456834 chr15:83450804-83456834:-:L1HS:REF 12 - L1HS REF full-length SH3GL3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.167392 0.846351 0.861635 0.826275 0.909285 0.786555 0.294521 0.831181 0.956715 0.879668 0.977609 0.928906 4449 4451 chr15 84042408 84043645 chr15:84042408-84043645:+:L1P1:REF 12 + L1P1 REF 3prime-truncated ADAMTSL3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.106638 0.729495 0.630977 0.563562 0.875172 0.227531 0.0788072 0.766434 0.889693 0.764378 0.938509 0.909774 4450 4452 chr15 85433963 85439965 chr15:85433963-85439965:+:L1PA2:REF 12 + L1PA2 REF full-length AKAP13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.114177 0.446809 0.873684 0.843023 0.316952 0.987365 0.0585198 0.798152 0.985745 0.901389 0.987481 0.327245 4451 4453 chr15 86205831 86211977 chr15:86205831-86211977:-:L1PA6:REF 12 - L1PA6 REF full-length AGBL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929972 0.745303 0.75 0.725786 0.292089 0.49422 0.0142349 0.808333 0.529255 0.796875 0.893204 0.965714 4452 4454 chr15 86466145 86467937 chr15:86466145-86467937:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated AGBL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.809524 0.0 0.333333 0.37963 0.454545 0.172414 0.0416667 0.2 0.0571429 0.16 0.294118 0.8 4453 4455 chr15 86528094 86534125 chr15:86528094-86534125:+:L1PA2:REF 12 + L1PA2 REF full-length AGBL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.302984 0.751754 0.803258 0.803515 0.828571 0.724464 0.0173611 0.880915 0.875559 0.820707 0.958381 0.923795 4454 4456 chr15 87001307 87006816 chr15:87001307-87006816:-:L1PA4:REF 10 - L1PA4 REF 3prime-truncated AGBL1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HEK293,H1 0.790698 0.104859 0.544061 0.533333 0.0970874 0.0493827 0.0 0.842857 0.790262 0.871795 4455 4457 chr15 87229793 87235895 chr15:87229793-87235895:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.852174 0.0203704 0.534211 0.494565 0.0679406 0.110169 0.0100671 0.935185 0.293296 0.560976 0.692308 0.918103 4456 4458 chr15 87249763 87255874 chr15:87249763-87255874:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.865014 0.148734 0.610638 0.64 0.0415335 0.161663 0.181818 0.911688 0.385928 0.521505 0.652252 0.925466 4457 4459 chr15 87275324 87281469 chr15:87275324-87281469:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.691145 0.245614 0.468647 0.454145 0.190016 0.284382 0.394737 0.82268 0.282098 0.39645 0.464098 0.654709 4458 4460 chr15 87463738 87469749 chr15:87463738-87469749:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.236728 0.627168 0.651915 0.498355 0.418561 0.476146 0.242424 0.848725 0.560029 0.633333 0.933039 0.866087 4459 4461 chr15 87509891 87515920 chr15:87509891-87515920:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.195553 0.66877 0.838593 0.828721 0.529663 0.620277 0.59964 0.980315 0.833137 0.860465 0.897424 0.914118 4460 4462 chr15 89043903 89049907 chr15:89043903-89049907:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.327194 0.777878 0.915114 0.908101 0.886519 0.6 0.704712 0.928814 0.966475 0.969152 0.944625 0.915033 4461 4463 chr15 89634318 89640301 chr15:89634318-89640301:+:L1PA3:REF 12 + L1PA3 REF full-length KIF7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.859617 0.930759 0.908088 0.907315 0.904632 0.937301 0.875899 0.938476 0.931915 0.953347 0.907672 0.88993 4462 4464 chr15 91500665 91506649 chr15:91500665-91506649:+:L1PA3:REF 12 + L1PA3 REF full-length CRAT37 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.284198 0.89454 0.762763 0.820728 0.534495 0.701961 0.375408 0.952696 0.8 0.897778 0.905135 0.876884 4463 4465 chr15 93675399 93681428 chr15:93675399-93681428:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.238441 0.856128 0.846551 0.823563 0.703226 0.604487 0.0258712 0.81962 0.849663 0.826942 0.9604 0.934455 4464 4466 chr15 97265580 97271604 chr15:97265580-97271604:-:L1PA2:REF 10 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.150092 0.608966 0.725578 0.731747 0.615917 0.0126214 0.770191 0.857279 0.860936 0.799582 4465 4467 chr15 97289925 97296313 chr15:97289925-97296313:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0559042 0.536118 0.645782 0.740326 0.0075 0.00732357 0.130159 0.919064 0.763359 0.869468 0.578537 4466 4468 chr15 97413295 97419473 chr15:97413295-97419473:-:L1PA4:REF 12 - L1PA4 REF full-length LINC02254 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.924883 0.686512 0.816552 0.814928 0.105098 0.552471 0.0367347 0.482864 0.921928 0.808159 0.968013 0.859442 4467 4469 chr15 97432693 97438849 chr15:97432693-97438849:+:L1PA3:REF 12 + L1PA3 REF full-length LINC02254 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896853 0.427356 0.6263 0.673779 0.914871 0.471515 0.0118026 0.675838 0.779492 0.721562 0.926931 0.953629 4468 4470 chr15 100067771 100073922 chr15:100067771-100073922:+:L1PA4:REF 12 + L1PA4 REF full-length ADAMTS17 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.826367 0.558237 0.403005 0.425656 0.782269 0.266667 0.0108108 0.913994 0.974468 0.501475 0.913295 0.914634 4469 4471 chr15 100365266 100371301 chr15:100365266-100371301:+:L1PA3:REF 12 + L1PA3 REF full-length CERS3-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905833 0.424815 0.673586 0.562077 0.568482 0.637376 0.0183221 0.663734 0.817411 0.674074 0.791531 0.886494 4470 4472 chr15 100417071 100423096 chr15:100417071-100423096:+:L1PA2:REF 11 + L1PA2 REF full-length CERS3-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.506615 0.789116 0.773627 0.794806 0.877186 0.0167247 0.963899 0.961404 0.769029 0.915474 0.799176 4471 4473 chr15 101626450 101632475 chr15:101626450-101632475:+:L1PA2:REF 12 + L1PA2 REF full-length TM2D3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.78253 0.526156 0.980664 0.971878 0.963225 0.93262 0.785188 0.953842 0.982964 0.974158 0.969787 0.96956 4472 4474 chr15 101880277 101886693 chr15:101880277-101886693:-:L1PA7:REF 7 - L1PA7 REF full-length HepG2,BJ,MRC5,HEK293T,HCT116,IMR90,HEK293 0.577778 0.444444 0.893023 0.740741 0.878788 0.897436 0.838384 4473 4475 chr16 19903 21270 chr16:19903-21270:-:L1P1:REF 2 - L1P1 REF 3prime-truncated WASIR2 MRC5,HEK293 0.783333 0.86 4474 4476 chr16 9584490 9590522 chr16:9584490-9590522:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.164087 0.851245 0.760776 0.791517 0.626943 0.702905 0.363636 0.532125 0.911151 0.765356 0.913095 0.938144 Brouha_2003:0.0 4475 4477 chr16 12070183 12076303 chr16:12070183-12076303:-:L1PA3:REF 12 - L1PA3 REF full-length SNX29 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.820738 0.931707 0.979845 0.966377 0.94198 0.962085 0.797794 0.935282 0.756818 0.968468 0.966068 0.89272 4476 4478 chr16 12591766 12597506 chr16:12591766-12597506:+:L1PA4:REF 4 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,MRC5,HCT116 0.823529 0.958333 0.424242 0.928571 4477 4479 chr16 12603812 12609764 chr16:12603812-12609764:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.714815 0.97006 0.620968 0.394584 0.116279 0.0319635 0.222222 0.753623 0.726027 0.580247 0.860465 0.72973 4478 4480 chr16 16840517 16846556 chr16:16840517-16846556:-:L1HS:REF 7 - L1HS REF full-length 2102Ep,BJ,MRC5,HeLaS3,HCT116,IMR90,H1 0.401328 0.857418 0.872 0.550911 0.91188 0.85008 0.910233 4479 4481 chr16 17733165 17739300 chr16:17733165-17739300:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898014 0.531639 0.792711 0.796305 0.156463 0.211538 0.0088845 0.502683 0.635282 0.772581 0.446695 0.920844 4480 4482 chr16 21042672 21048703 chr16:21042672-21048703:-:L1PA2:REF 12 - L1PA2 REF full-length DNAH3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.247141 0.360114 0.878686 0.920222 0.797207 0.737844 0.0151411 0.472454 0.932705 0.851638 0.939844 0.894646 4481 4483 chr16 21329023 21335176 chr16:21329023-21335176:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.955844 0.877926 0.97619 0.967782 0.975 0.929936 0.291667 0.980952 0.982759 0.98 0.979104 0.948148 4482 4484 chr16 26092617 26098745 chr16:26092617-26098745:+:L1PA6:REF 11 + L1PA6 REF full-length HS3ST4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.707022 0.0132827 0.365155 0.275519 0.0144928 0.0254237 0.0 0.039801 0.040404 0.302158 0.347826 4483 4485 chr16 31278737 31284853 chr16:31278737-31284853:-:L1PA5:REF 11 - L1PA5 REF full-length ITGAM 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.726027 0.595506 0.40625 0.551724 0.233645 0.549296 0.228571 0.785714 0.82963 0.375 0.609375 4484 4486 chr16 31337869 31344038 chr16:31337869-31344038:+:L1PA4:REF 12 + L1PA4 REF full-length ITGAM 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.789954 0.129741 0.446575 0.333609 0.593333 0.0767857 0.0200617 0.81165 0.645207 0.479167 0.70015 0.638686 4485 4487 chr16 31629877 31636018 chr16:31629877-31636018:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.828283 0.619463 0.671413 0.749349 0.543891 0.592085 0.0425753 0.822285 0.771812 0.721212 0.548998 0.820833 4486 4488 chr16 31687221 31693324 chr16:31687221-31693324:+:L1PA4:REF 12 + L1PA4 REF full-length CLUHP3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.839506 0.742361 0.815884 0.783388 0.692047 0.701282 0.158016 0.768041 0.817766 0.783455 0.898054 0.836935 4487 4489 chr16 31937557 31943695 chr16:31937557-31943695:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873156 0.592411 0.701818 0.714443 0.509091 0.62117 0.0433071 0.838202 0.817073 0.728571 0.80354 0.85654 4488 4490 chr16 32587481 32588397 chr16:32587481-32588397:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.799391 0.255303 0.537906 0.546898 0.162976 0.240331 0.0108025 0.837887 0.627498 0.521148 0.750258 0.766773 4489 4491 chr16 32837589 32842830 chr16:32837589-32842830:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.832457 0.343937 0.63746 0.685845 0.200345 0.19808 0.0189542 0.610639 0.712826 0.609249 0.466585 0.837352 4490 4492 chr16 33952564 33958612 chr16:33952564-33958612:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.858424 0.861448 0.796069 0.782518 0.646931 0.694064 0.00803213 0.895805 0.888641 0.749333 0.812146 0.909297 4491 4493 chr16 34018673 34024592 chr16:34018673-34024592:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.791228 0.572721 0.626497 0.666909 0.231104 0.370497 0.0153671 0.492021 0.678469 0.649801 0.368294 0.831151 4492 4494 chr16 34118474 34119193 chr16:34118474-34119193:+:L1HS:REF 11 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.588235 0.20625 0.179775 0.269373 0.168831 0.0204082 0.0 0.346939 0.344538 0.133333 0.415094 4493 4495 chr16 35160155 35166172 chr16:35160155-35166172:+:L1PA3:REF 12 + L1PA3 REF full-length UBE2MP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.799412 0.556373 0.65127 0.595145 0.404104 0.460967 0.0131291 0.244019 0.820426 0.635317 0.612937 0.868613 4494 4496 chr16 35468696 35474693 chr16:35468696-35474693:+:L1PA3:REF 12 + L1PA3 REF full-length FRG2DP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.661364 0.620896 0.713924 0.806488 0.423592 0.652632 0.0242915 0.433036 0.879679 0.727273 0.664723 0.816092 4495 4497 chr16 35608475 35614501 chr16:35608475-35614501:-:L1HS:REF 8 - L1HS REF full-length 2102Ep,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293 0.842386 0.6 0.665247 0.276134 0.0269966 0.653495 0.585366 0.524318 4496 4498 chr16 35715796 35721963 chr16:35715796-35721963:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.772321 0.218333 0.525641 0.461538 0.0221811 0.282723 0.015674 0.686207 0.743405 0.403433 0.456233 0.738589 4497 4499 chr16 35958589 35959254 chr16:35958589-35959254:+:L1P1:REF 5 + L1P1 REF 3prime-truncated 2102Ep,HEK293T,HCT116,HEK293,H1 0.805128 0.0714286 0.493534 0.401084 0.681818 4498 4500 chr16 46449411 46455427 chr16:46449411-46455427:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0749052 0.689985 0.615437 0.627729 0.39418 0.597199 0.00990099 0.126113 0.806929 0.656319 0.556536 0.876453 4499 4501 chr16 46489860 46496028 chr16:46489860-46496028:+:L1PA4:REF 11 + L1PA4 REF full-length ANKRD26P1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.655072 0.308318 0.550289 0.595697 0.170233 0.46063 0.0139417 0.0403727 0.643985 0.294036 0.742931 4500 4502 chr16 46535347 46541495 chr16:46535347-46541495:+:L1PA3:REF 6 + L1PA3 REF full-length ANKRD26P1 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116 0.83045 0.504651 0.712575 0.813754 0.497835 0.811688 4501 4503 chr16 47182757 47188783 chr16:47182757-47188783:+:L1PA3:REF 12 + L1PA3 REF full-length ITFG1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.935869 0.966615 0.975599 0.979398 0.945261 0.97497 0.964266 0.970736 0.981638 0.986667 0.973716 0.980104 4502 4504 chr16 47347059 47353218 chr16:47347059-47353218:+:L1PA4:REF 1 + L1PA4 REF full-length ITFG1 MRC5 0.942308 4503 4505 chr16 47437710 47443907 chr16:47437710-47443907:+:L1PA4:REF 12 + L1PA4 REF full-length ITFG1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.907089 0.982955 0.969295 0.983718 0.953629 0.980371 0.966809 0.963893 0.974584 0.959877 0.96875 0.964286 4504 4506 chr16 47541007 47547243 chr16:47541007-47547243:-:L1PA6:REF 12 - L1PA6 REF full-length PHKB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871514 0.984791 0.971491 0.980661 0.959488 0.972665 0.958652 0.987988 0.975862 0.974212 0.968677 0.985637 4505 4507 chr16 47677770 47683912 chr16:47677770-47683912:-:L1PA4:REF 10 - L1PA4 REF full-length PHKB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.915888 0.971098 0.97 0.977233 0.968085 0.992188 0.9375 0.981818 0.984252 0.928144 4506 4508 chr16 47807975 47814106 chr16:47807975-47814106:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887199 0.481409 0.555079 0.654773 0.0984975 0.435233 0.0158451 0.96129 0.779883 0.653165 0.6384 0.91453 4507 4509 chr16 47909897 47916004 chr16:47909897-47916004:+:L1PA5:REF 12 + L1PA5 REF full-length LINC02133 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871734 0.0430328 0.364807 0.346715 0.0173913 0.107066 0.003663 0.241176 0.39934 0.404389 0.324373 0.901532 4508 4510 chr16 48015465 48021489 chr16:48015465-48021489:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.193499 0.888767 0.868721 0.883053 0.859391 0.753541 0.0524451 0.980806 0.921799 0.839858 0.949475 0.922272 4509 4511 chr16 48666607 48668775 chr16:48666607-48668775:-:L1PA6:REF 10 - L1PA6 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.0638298 0.0434783 0.111111 0.0 0.111111 0.0526316 0.307692 0.0769231 0.0 0.0882353 4510 4512 chr16 48768571 48774603 chr16:48768571-48774603:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.775405 0.855683 0.710394 0.817433 0.503346 0.622222 0.021148 0.790741 0.873563 0.815238 0.821773 0.932283 4511 4513 chr16 51329809 51335954 chr16:51329809-51335954:+:L1PA5:REF 12 + L1PA5 REF full-length MIR548AI 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.46875 0.391941 0.445205 0.455446 0.421769 0.204545 0.0078125 0.0512821 0.259843 0.46 0.489655 0.477778 4512 4514 chr16 52333409 52339534 chr16:52333409-52339534:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.928571 0.946429 0.487654 0.243137 0.216867 0.018018 0.00917431 0.942529 0.323529 0.521739 0.935484 0.958333 4513 4515 chr16 52973416 52976027 chr16:52973416-52976027:-:L1P3:REF 12 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.854749 0.723577 0.656915 0.688252 0.363636 0.187302 0.00252525 0.802198 0.825103 0.636029 0.947368 0.927184 4514 4516 chr16 53344431 53350517 chr16:53344431-53350517:-:L1PA5:REF 8 - L1PA5 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293 0.665049 0.577465 0.755319 0.725191 0.785714 0.0252101 0.75 0.944 4515 4517 chr16 53396916 53402916 chr16:53396916-53402916:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.927122 0.847983 0.846815 0.890006 0.87089 0.860235 0.24115 0.510177 0.984843 0.884696 0.946168 0.965144 4516 4518 chr16 54042096 54048145 chr16:54042096-54048145:+:L1HS:REF 12 + L1HS REF full-length FTO 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.641159 0.907853 0.947876 0.855519 0.899447 0.750347 0.775107 0.937346 0.940881 0.988764 0.896636 0.841843 4517 4519 chr16 54661370 54665244 chr16:54661370-54665244:+:L1P3:REF 1 + L1P3 REF 3prime-truncated MRC5 0.0 4518 4520 chr16 55615451 55615846 chr16:55615451-55615846:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.859189 0.878333 0.713018 0.733631 0.810959 0.130769 0.0730769 0.935714 0.954545 0.678414 0.898072 0.95092 4519 4521 chr16 56154514 56160662 chr16:56154514-56160662:+:L1PA3:REF 11 + L1PA3 REF full-length LOC283856 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896094 0.689035 0.781489 0.682632 0.609512 0.082243 0.898795 0.847441 0.733173 0.84984 0.955466 4520 4522 chr16 56391235 56394461 chr16:56391235-56394461:+:L1PA5:REF 6 + L1PA5 REF 3prime-truncated AMFR 2102Ep,HepG2,MRC5,HEK293T,MCF7,HEK293 0.928191 0.982673 0.982456 0.964912 0.969512 0.972973 4521 4523 chr16 58779887 58785996 chr16:58779887-58785996:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887155 0.419435 0.557833 0.581961 0.153276 0.161458 0.200378 0.919403 0.558824 0.544872 0.367925 0.928571 4522 4524 chr16 58873142 58879266 chr16:58873142-58879266:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.865256 0.19092 0.41358 0.367934 0.138335 0.245353 0.296296 0.391437 0.385692 0.309028 0.34955 0.85625 4523 4525 chr16 58918644 58921104 chr16:58918644-58921104:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.888889 0.0561404 0.376471 0.205189 0.016129 0.0 0.0 0.271186 0.0934579 0.220588 0.479592 0.84375 4524 4526 chr16 58991471 58993354 chr16:58991471-58993354:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.421642 0.288194 0.572727 0.507592 0.0185759 0.1 0.0 0.201389 0.17378 0.591463 0.537356 0.851064 4525 4527 chr16 59363201 59365889 chr16:59363201-59365889:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921947 0.672065 0.844413 0.863922 0.4214 0.637993 0.351396 0.695946 0.802005 0.844498 0.586301 0.937046 4526 4528 chr16 59559294 59565319 chr16:59559294-59565319:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.882326 0.781593 0.94419 0.978408 0.624381 0.622738 0.0291921 0.792164 0.85097 0.965054 0.881844 0.97762 4527 4529 chr16 59809317 59815504 chr16:59809317-59815504:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889086 0.0926829 0.683461 0.537888 0.0810127 0.110697 0.00690608 0.394495 0.421599 0.551181 0.329167 0.936027 4528 4530 chr16 59976601 59982619 chr16:59976601-59982619:+:L1PA2:REF 12 + L1PA2 REF full-length LINC02141 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.587807 0.340899 0.727686 0.52533 0.102546 0.352436 0.0114068 0.50165 0.569268 0.466381 0.393431 0.740469 4529 4531 chr16 60522745 60528760 chr16:60522745-60528760:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0437202 0.844695 0.841653 0.823552 0.69907 0.0172619 0.892336 0.895921 0.865809 0.848684 0.933073 4530 4532 chr16 60935971 60941164 chr16:60935971-60941164:+:L1PA4:REF 10 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.828846 0.440154 0.644942 0.276995 0.117557 0.548387 0.305495 0.627451 0.484153 0.911927 4531 4533 chr16 61782078 61788101 chr16:61782078-61788101:+:L1PA2:REF 6 + L1PA2 REF full-length CDH8 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,HCT116 0.125 0.8 0.781667 0.486842 0.939597 0.788177 4532 4534 chr16 61801455 61807489 chr16:61801455-61807489:+:L1PA2:REF 11 + L1PA2 REF full-length CDH8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.109764 0.710215 0.819255 0.743764 0.353977 0.92057 0.0247619 0.617216 0.821309 0.909423 0.931818 4533 4535 chr16 62992368 62998492 chr16:62992368-62998492:-:L1PA3:REF 5 - L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HCT116 0.856061 0.213592 0.650485 0.0373134 0.770833 4534 4536 chr16 63119951 63125975 chr16:63119951-63125975:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.869951 0.84824 0.856639 0.866857 0.725581 0.798039 0.134557 0.809639 0.940092 0.88588 0.943195 0.975543 4535 4537 chr16 63819697 63821378 chr16:63819697-63821378:+:L1P2:REF 9 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293 0.896552 0.130435 0.542857 0.534884 0.0227273 0.2 0.0833333 0.48 0.56962 4536 4538 chr16 65551127 65557278 chr16:65551127-65557278:+:L1PA3:REF 12 + L1PA3 REF full-length LINC00922 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.884956 0.435356 0.94198 0.941066 0.309231 0.450549 0.0505618 0.955932 0.515021 0.960784 0.882784 0.94186 4537 4539 chr16 65690011 65696020 chr16:65690011-65696020:+:L1HS:REF 11 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.491876 0.780886 0.942155 0.904492 0.642574 0.148638 0.965296 0.912777 0.941253 0.952998 0.969052 4538 4540 chr16 66495982 66500000 chr16:66495982-66500000:+:L1P1:REF 12 + L1P1 REF 3prime-truncated BEAN1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.914148 0.713751 0.90312 0.883462 0.756391 0.918455 0.0642361 0.987952 0.96741 0.882155 0.918919 0.965174 4539 4541 chr16 68583448 68589505 chr16:68583448-68589505:-:L1HS:REF 12 - L1HS REF full-length ZFP90 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.121355 0.922614 0.869252 0.842745 0.94345 0.88262 0.117799 0.972238 0.976866 0.822021 0.96051 0.91358 4540 4542 chr16 71508513 71511310 chr16:71508513-71511310:-:L1P2:REF 2 - L1P2 REF 3prime-truncated LOC105371335 MRC5,IMR90 0.141791 0.475 4541 4543 chr16 72324392 72329827 chr16:72324392-72329827:+:L1P2:REF 12 + L1P2 REF 3prime-truncated LINC01572 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.815657 0.943804 0.838961 0.725159 0.769401 0.651007 0.0212121 0.676796 0.946429 0.717489 0.868946 0.885246 4542 4544 chr16 72543204 72549689 chr16:72543204-72549689:+:L1PA7:REF 12 + L1PA7 REF full-length LINC01572 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.925094 0.96 0.979167 0.950119 0.969072 0.692308 0.694915 0.962963 0.991903 0.956835 0.917969 0.956989 4543 4545 chr16 72627274 72633298 chr16:72627274-72633298:+:L1PA2:REF 11 + L1PA2 REF full-length LINC01572 2102Ep,HepG2,BJ,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0319508 0.00557325 0.870055 0.0106851 0.897563 0.0092827 0.371865 0.0156 0.847138 0.349112 0.479554 4544 4546 chr16 73824400 73830431 chr16:73824400-73830431:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.185567 0.813748 0.774118 0.795662 0.711268 0.674251 0.0354391 0.753363 0.834182 0.9024 0.934249 0.950596 4545 4547 chr16 75719124 75725286 chr16:75719124-75725286:+:L1PA4:REF 12 + L1PA4 REF full-length CPHXL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.824859 0.644336 0.658103 0.72919 0.462107 0.349785 0.0288248 0.671533 0.794958 0.709016 0.712406 0.869258 4546 4548 chr16 75821959 75827981 chr16:75821959-75827981:-:L1PA2:REF 11 - L1PA2 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.933783 0.810828 0.812236 0.691489 0.768498 0.0251852 0.910505 0.921447 0.837981 0.882005 0.68621 4547 4549 chr16 80136317 80142458 chr16:80136317-80142458:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.765487 0.155148 0.766393 0.593318 0.0801603 0.0579268 0.0 0.380282 0.0622951 0.652778 0.497449 0.903226 4548 4550 chr16 80219706 80225843 chr16:80219706-80225843:+:L1PA4:REF 1 + L1PA4 REF full-length LOC102724084 HeLaS3 0.288793 4549 4551 chr16 80727089 80730717 chr16:80727089-80730717:+:L1HS:REF 12 + L1HS REF 3prime-truncated CDYL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.931794 0.70964 0.914055 0.948406 0.766137 0.0178817 0.00990854 0.00682927 0.632887 0.855319 0.969595 0.928395 4550 4552 chr16 81977353 81978467 chr16:81977353-81978467:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.86468 0.843552 0.784257 0.865303 0.714896 0.674929 0.118916 0.19367 0.907288 0.672691 0.945718 0.94208 4551 4553 chr16 82139255 82145258 chr16:82139255-82145258:+:L1PA2:REF 12 + L1PA2 REF full-length MPHOSPH6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.395756 0.973627 0.974918 0.942847 0.913812 0.984288 0.867455 0.00901442 0.875184 0.891768 0.966248 0.829346 4552 4554 chr16 83637252 83643296 chr16:83637252-83643296:+:L1HS:REF 12 + L1HS REF full-length CDH13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.097137 0.825306 0.879084 0.973973 0.598763 0.780501 0.056338 0.23793 0.82752 0.948197 0.959391 0.881127 Brouha_2003:0.0 4553 4555 chr16 86233295 86239310 chr16:86233295-86239310:+:L1PA3:REF 12 + L1PA3 REF full-length LINC01081 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.755253 0.730119 0.885714 0.980747 0.910101 0.886729 0.0150725 0.91736 0.757751 0.904809 0.958143 0.929577 4554 4556 chr16 86262173 86268197 chr16:86262173-86268197:+:L1PA2:REF 12 + L1PA2 REF full-length LINC01081 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929646 0.810087 0.861627 0.985154 0.895762 0.953225 0.170288 0.948826 0.963766 0.985433 0.909856 0.954421 4555 4557 chr16 88851386 88852803 chr16:88851386-88852803:+:L1P2:REF 1 + L1P2 REF 3prime-truncated GALNS MRC5 0.68323 4556 4558 chr17 634396 640538 chr17:634396-640538:-:L1PA5:REF 12 - L1PA5 REF full-length VPS53 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.945386 0.908016 0.847636 0.900079 0.887564 0.87931 0.964029 0.968 0.984797 0.941176 0.904088 0.981567 4557 4559 chr17 3147366 3153409 chr17:3147366-3153409:-:L1PA2:REF 12 - L1PA2 REF full-length LOC100288728 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.204276 0.697339 0.646302 0.669039 0.632549 0.611241 0.0104822 0.933754 0.85469 0.699561 0.918293 0.805861 4558 4560 chr17 3176530 3182557 chr17:3176530-3182557:+:L1PA2:REF 12 + L1PA2 REF full-length LOC100288728 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.279655 0.871921 0.782007 0.464031 0.721042 0.755556 0.141414 0.949692 0.816893 0.776871 0.758945 0.63354 4559 4561 chr17 3326580 3332726 chr17:3326580-3332726:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887197 0.685311 0.646778 0.638666 0.418012 0.516771 0.016791 0.488067 0.75958 0.66617 0.765403 0.766154 4560 4562 chr17 3337282 3343391 chr17:3337282-3343391:-:L1PA5:REF 11 - L1PA5 REF full-length 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.816817 0.431746 0.478375 0.187675 0.184028 0.0114943 0.371795 0.273224 0.40724 0.186937 0.769231 4561 4563 chr17 5572832 5574657 chr17:5572832-5574657:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated NLRP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.9062 0.506873 0.907021 0.941558 0.382911 0.634085 0.947826 0.593301 0.968692 0.884868 0.752756 0.893548 4562 4564 chr17 6802481 6808614 chr17:6802481-6808614:-:L1PA4:REF 12 - L1PA4 REF full-length TEKT1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.914926 0.805928 0.778974 0.769406 0.458161 0.648402 0.0167973 0.00295858 0.957447 0.699728 0.936702 0.951456 4563 4565 chr17 6847201 6849659 chr17:6847201-6849659:-:L1P3:REF 12 - L1P3 REF 3prime-truncated ALOX12P2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.888199 0.875 0.619289 0.587156 0.556886 0.974576 0.277778 0.952381 0.906433 0.554545 0.963636 0.973333 4564 4566 chr17 9615985 9622015 chr17:9615985-9622015:+:L1HS:REF 12 + L1HS REF full-length CFAP52 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.100228 0.913696 0.85159 0.799542 0.920205 0.878016 0.117465 0.973552 0.960968 0.842187 0.952117 0.893013 4565 4567 chr17 11861025 11867172 chr17:11861025-11867172:-:L1PA3:REF 11 - L1PA3 REF full-length DNAH9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.929066 0.657407 0.77044 0.775665 0.49497 0.795 0.464286 0.921569 0.794737 0.899441 0.945578 4566 4568 chr17 12449903 12455932 chr17:12449903-12455932:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.295337 0.757208 0.910226 0.969755 0.780736 0.660624 0.849146 0.837222 0.959473 0.917879 0.897033 4567 4569 chr17 13855495 13861599 chr17:13855495-13861599:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.829268 0.588727 0.559682 0.811912 0.769231 0.143617 0.0 0.894737 0.915217 0.709524 0.706173 0.947368 4568 4570 chr17 15223343 15224561 chr17:15223343-15224561:-:L1PA7:REF 10 - L1PA7 REF 3prime-truncated PMP22 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293,H1 0.903226 0.0606061 1.0 0.923077 0.473684 0.0 0.961538 0.909091 0.74359 0.909091 4569 4571 chr17 26735774 26741856 chr17:26735774-26741856:+:L1PA4:REF 8 + L1PA4 REF full-length 2102Ep,BJ,MRC5,HEK293T,MCF7,HCT116,HEK293,H1 0.645161 0.424242 0.487805 0.133333 0.228571 0.25641 0.206897 0.741935 4570 4572 chr17 27039669 27045623 chr17:27039669-27045623:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.829109 0.734674 0.607632 0.627689 0.508275 0.560339 0.653422 0.0898166 0.805556 0.656202 0.799734 0.869469 4571 4573 chr17 27099164 27105176 chr17:27099164-27105176:-:L1PA2:REF 12 - L1PA2 REF full-length LOC105371703 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0965547 0.793469 0.686126 0.758249 0.03383 0.838028 0.0191257 0.74784 0.929888 0.749787 0.932384 0.859534 4572 4574 chr17 27249212 27255352 chr17:27249212-27255352:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885246 0.417021 0.7 0.831703 0.803468 0.833333 0.272727 0.958333 0.944785 0.820312 0.938776 0.852941 4573 4575 chr17 30406814 30413023 chr17:30406814-30413023:-:L1PA6:REF 12 - L1PA6 REF full-length CPD 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.892593 0.988701 0.886364 0.815385 0.918033 0.819277 0.708333 0.769231 0.903084 0.937984 0.85 0.966667 4574 4576 chr17 31664913 31671035 chr17:31664913-31671035:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.760943 0.548387 0.792593 0.843066 0.768116 0.511905 0.00334448 0.985185 0.962617 0.739726 0.792079 0.922222 4575 4577 chr17 32678257 32684272 chr17:32678257-32684272:-:L1PA2:REF 12 - L1PA2 REF full-length MYO1D 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0957614 0.688758 0.902778 0.830856 0.723305 0.630063 0.979616 0.978525 0.982513 0.857623 0.959337 0.857539 4576 4578 chr17 32887137 32893184 chr17:32887137-32893184:+:L1PA2:REF 12 + L1PA2 REF full-length MYO1D 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.280702 0.959198 0.903117 0.842779 0.950808 0.592732 0.533274 0.958515 0.961864 0.895522 0.96251 0.9375 4577 4579 chr17 34083021 34089185 chr17:34083021-34089185:-:L1PA3:REF 12 - L1PA3 REF full-length ASIC2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929348 0.639035 0.76252 0.774668 0.617742 0.659656 0.0173228 0.742991 0.690141 0.819328 0.88503 0.944056 4578 4580 chr17 34292450 34298452 chr17:34292450-34298452:-:L1PA2:REF 11 - L1PA2 REF full-length CCL11 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.34284 0.904762 0.94377 0.715317 0.809825 0.0853755 0.945988 0.86016 0.761838 0.966947 0.582577 4579 4581 chr17 34808392 34808394 chr17:34808392-34808394:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip3048,1KGP:L1_umary_LINE1_2753,Philippe:EXP_ID_0508 MCF7,IMR90 0.911585 0.395683 Beck_2010:38.0 4580 4582 chr17 35274370 35278179 chr17:35274370-35278179:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated SLFN5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.736111 0.1052 0.836795 0.780833 0.504563 0.728365 0.0184874 0.208824 0.792428 0.783476 0.775388 0.721569 4581 4583 chr17 35393949 35399945 chr17:35393949-35399945:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.931696 0.451153 0.878049 0.954853 0.602351 0.163827 0.0329489 0.0244328 0.909705 0.874477 0.937046 0.872671 4582 4584 chr17 41200867 41206900 chr17:41200867-41206900:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.615822 0.727661 0.853926 0.828877 0.565083 0.597415 0.0191458 0.530778 0.881376 0.842975 0.84187 0.843179 4583 4585 chr17 51304948 51311073 chr17:51304948-51311073:+:L1PA6:REF 7 + L1PA6 REF full-length LINC02071 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.944444 0.951613 0.90625 0.762712 0.708333 1.0 0.964286 4584 4586 chr17 51331252 51333097 chr17:51331252-51333097:-:L1P1:REF 12 - L1P1 REF 3prime-truncated LINC02071 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.920422 0.499252 0.857969 0.843212 0.915003 0.866873 0.284251 0.970329 0.916511 0.873813 0.964387 0.952297 4585 4587 chr17 51446677 51449322 chr17:51446677-51449322:+:L1PA7:REF 9 + L1PA7 REF 3prime-truncated LINC02073 HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.0238095 0.189189 0.173228 0.1 0.0454545 0.25 0.3125 0.25 0.4 4586 4588 chr17 52403847 52409865 chr17:52403847-52409865:-:L1PA2:REF 11 - L1PA2 REF full-length LINC01982 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.77184 0.716971 0.705279 0.724076 0.490748 0.524725 0.00750626 0.582035 0.932649 0.714552 0.94898 4587 4589 chr17 54316374 54320132 chr17:54316374-54320132:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909561 0.00283286 0.219595 0.206478 0.025 0.0288462 0.0 0.087963 0.909385 0.256098 0.10664 0.827381 4588 4590 chr17 54639200 54645354 chr17:54639200-54645354:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.0147059 4589 4591 chr17 55105777 55108871 chr17:55105777-55108871:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated STXBP4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.907143 0.959075 0.913947 0.963121 0.961098 0.865385 0.73913 0.945312 0.970455 0.940299 0.942559 0.947644 4590 4592 chr17 55501716 55507741 chr17:55501716-55507741:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.042195 0.950374 0.925063 0.903364 0.366521 0.965304 0.951422 0.830537 0.971264 0.896949 0.947253 0.898201 4591 4593 chr17 55938699 55945099 chr17:55938699-55945099:+:L1PA8:REF 2 + L1PA8 REF full-length MRC5,HEK293 0.47651 0.433333 4592 4594 chr17 56002401 56008616 chr17:56002401-56008616:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.850206 0.500458 0.730742 0.734711 0.496285 0.559732 0.00722022 0.398551 0.689895 0.66858 0.758694 0.928731 4593 4595 chr17 60341533 60343056 chr17:60341533-60343056:-:L1P2:REF 12 - L1P2 REF 3prime-truncated USP32 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.923077 0.981818 0.981595 0.98505 0.981651 0.974943 0.950783 0.966724 0.982063 0.992647 0.988183 0.943775 4594 4596 chr17 60881440 60887474 chr17:60881440-60887474:-:L1PA2:REF 12 - L1PA2 REF full-length BCAS3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0603409 0.579567 0.771049 0.930851 0.00703895 0.421053 0.0165563 0.269231 0.649248 0.902492 0.948033 0.490094 4595 4597 chr17 61110229 61116238 chr17:61110229-61116238:+:L1PA2:REF 12 + L1PA2 REF full-length BCAS3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880309 0.952418 0.952687 0.978918 0.963142 0.943853 0.362661 0.963493 0.958264 0.981043 0.977382 0.972521 4596 4598 chr17 62356953 62363149 chr17:62356953-62363149:+:L1PA8:REF 12 + L1PA8 REF full-length EFCAB3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886111 0.0191781 0.343173 0.460446 0.785498 0.149758 0.0192308 0.878947 0.91989 0.538922 0.716923 0.947368 4597 4599 chr17 66596579 66602595 chr17:66596579-66602595:-:L1HS:REF 12 - L1HS REF full-length PRKCA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.244874 0.980785 0.981727 0.985334 0.59056 0.980558 0.856604 0.952627 0.970169 0.973984 0.970433 0.860969 4598 4600 chr17 66641175 66641180 chr17:66641175-66641180:+:L1HS:NONREF 6 + L1HS KNR euL1db:mrip3106,1KGP:L1_umary_LINE1_2772 PRKCA HepG2,HEK293T,K562,MCF7,HEK293,H1 0.992509 0.966951 0.993443 0.981339 0.981073 0.958904 Beck_2010:130.0 Rodriguez-Martin_2020:3,Tubio_2014:2 4599 4601 chr17 68408123 68414142 chr17:68408123-68414142:-:L1PA3:REF 9 - L1PA3 REF full-length ARSG 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.0623557 0.0102041 0.180253 0.0414013 0.806763 0.369393 0.951583 0.203187 0.171004 4600 4602 chr17 69000000 69005148 chr17:69000000-69005148:-:L1HS:REF 12 - L1HS REF 3prime-truncated ABCA9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.229028 0.906615 0.875287 0.89725 0.882088 0.876684 0.845582 0.737351 0.979538 0.868243 0.919104 0.839286 4601 4603 chr17 69611943 69618099 chr17:69611943-69618099:-:L1PA3:REF 12 - L1PA3 REF full-length LINC01483 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.597403 0.833333 0.59761 0.778598 0.624606 0.729167 0.00540541 0.361905 0.601078 0.747967 0.616822 0.755556 4602 4604 chr17 70361267 70361269 chr17:70361267-70361269:+:L1HS:NONREF 6 + L1HS KNR euL1db:mrip3113,1KGP:L1_umary_LINE1_2778,Philippe:EXP_ID_0512 HepG2,BJ,HEK293T,MCF7,HCT116,HEK293 0.852286 0.761603 0.968839 0.846154 0.927478 0.965124 Beck_2010:63.0 4603 4605 chr17 70458956 70464987 chr17:70458956-70464987:+:L1HS:REF 11 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.584856 0.846329 0.841727 0.960794 0.947074 0.903783 0.0441176 0.773652 0.936801 0.921405 0.919517 4604 4606 chr17 70544788 70550795 chr17:70544788-70550795:-:L1HS:REF 8 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,IMR90,HEK293 0.557143 0.778816 0.82967 0.953353 0.896429 0.848138 0.928571 0.901493 4605 4607 chr17 71131111 71132457 chr17:71131111-71132457:-:L1P3:REF 12 - L1P3 REF 3prime-truncated CASC17 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.914414 0.0407569 0.733871 0.888471 0.928879 0.0410448 0.0 0.486607 0.967611 0.894444 0.896907 0.905 4606 4608 chr17 71351959 71357889 chr17:71351959-71357889:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.943739 0.470984 0.897594 0.951863 0.906001 0.671894 0.0195618 0.549679 0.945874 0.939933 0.939163 0.916949 4607 4609 chr18 535701 541755 chr18:535701-541755:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.145597 0.797323 0.805921 0.806915 0.827381 0.725455 0.216535 0.681237 0.827512 0.840547 0.88658 0.747619 4608 4610 chr18 970858 976878 chr18:970858-976878:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0457176 0.841788 0.803441 0.840656 0.65281 0.858849 0.00344488 0.971373 0.940327 0.824462 0.886004 0.788219 4609 4611 chr18 1029349 1035439 chr18:1029349-1035439:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.625 0.0115207 0.300248 0.38403 0.0838574 0.412766 0.258359 0.816327 0.822222 0.353333 0.681818 0.914286 4610 4612 chr18 1335217 1341361 chr18:1335217-1341361:+:L1PA5:REF 1 + L1PA5 REF full-length LINC00470 MRC5 0.45 4611 4613 chr18 1516189 1522240 chr18:1516189-1522240:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0483384 0.773006 0.718447 0.791696 0.361158 0.725537 0.0478821 0.608791 0.919592 0.769575 0.822938 0.976821 4612 4614 chr18 2247167 2253196 chr18:2247167-2253196:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0792267 0.884063 0.917237 0.977941 0.701446 0.972489 0.867368 0.872212 0.976931 0.846055 0.93564 0.924848 4613 4615 chr18 2860237 2866343 chr18:2860237-2866343:-:L1PA4:REF 12 - L1PA4 REF full-length EMILIN2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901471 0.632616 0.940154 0.874905 0.925329 0.67 0.704545 0.949405 0.948435 0.809524 0.94494 0.941406 4614 4616 chr18 4477329 4478177 chr18:4477329-4478177:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.167785 0.526912 0.742336 0.788274 0.640684 0.639752 0.00989011 0.606488 0.738516 0.759155 0.794659 0.932773 4615 4617 chr18 5004136 5010155 chr18:5004136-5010155:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0152954 0.0125483 0.125054 0.0776398 0.0100334 0.863061 0.0162075 0.0278689 0.948638 0.0861196 0.0364109 0.0170503 4616 4618 chr18 5122003 5128135 chr18:5122003-5128135:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.737705 0.0135135 0.207547 0.0914286 0.0163934 0.0384615 0.0 0.0277778 0.101695 0.14 0.45 0.744681 4617 4619 chr18 5684668 5687891 chr18:5684668-5687891:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.208014 0.754518 0.720755 0.754884 0.882088 0.433443 0.0180556 0.227468 0.743304 0.783828 0.870968 0.895363 4618 4620 chr18 7966442 7972474 chr18:7966442-7972474:+:L1PA2:REF 12 + L1PA2 REF full-length PTPRM 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.192243 0.984906 0.972676 0.985882 0.972874 0.979474 0.0122066 0.67803 0.975381 0.97341 0.967285 0.954386 4619 4621 chr18 8057452 8063463 chr18:8057452-8063463:-:L1PA2:REF 11 - L1PA2 REF full-length PTPRM 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.143341 0.578597 0.899829 0.939968 0.880237 0.973196 0.0207469 0.72456 0.0365141 0.963068 0.946081 4620 4622 chr18 8146320 8152115 chr18:8146320-8152115:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated PTPRM K562 0.0 4621 4623 chr18 9982522 9983275 chr18:9982522-9983275:-:L1PA6:REF 3 - L1PA6 REF 3prime-truncated HepG2,MRC5,K562 0.454545 0.725 0.0169492 4622 4624 chr18 10572668 10578678 chr18:10572668-10578678:-:L1PA2:REF 7 - L1PA2 REF full-length 2102Ep,HepG2,MRC5,HEK293T,K562,MCF7,IMR90 0.689394 0.95 0.984293 0.930556 0.646707 0.389313 0.984615 4623 4625 chr18 12139659 12141450 chr18:12139659-12141450:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated ANKRD62 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.791349 0.829739 0.770087 0.790576 0.89847 0.576659 0.162521 0.830735 0.895698 0.827586 0.925926 0.943243 4624 4626 chr18 12181637 12187780 chr18:12181637-12187780:+:L1PA3:REF 10 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293 0.808989 0.705584 0.619048 0.662304 0.666667 0.7 0.0638298 0.471429 0.914286 0.705128 4625 4627 chr18 12202444 12208458 chr18:12202444-12208458:-:L1PA2:REF 12 - L1PA2 REF full-length C18orf61 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.186028 0.862864 0.889038 0.810015 0.884892 0.556734 0.0739065 0.623784 0.977449 0.892857 0.964017 0.928983 4626 4628 chr18 12491262 12491264 chr18:12491262-12491264:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip3183,Philippe:EXP_ID_0519 SPIRE1 HepG2 0.977843 Beck_2010:41.0 4627 4629 chr18 13086434 13086647 chr18:13086434-13086647:-:L1PA7:REF 2 - L1PA7 REF 3prime-truncated CEP192 MRC5,HEK293 0.964706 0.962963 4628 4630 chr18 13343089 13349218 chr18:13343089-13349218:-:L1PA4:REF 12 - L1PA4 REF full-length LDLRAD4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910979 0.917167 0.842043 0.724208 0.670219 0.424608 0.00911162 0.984671 0.872727 0.776 0.944739 0.961661 4629 4631 chr18 13975860 13981891 chr18:13975860-13981891:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.219395 0.862942 0.770492 0.768672 0.835271 0.786697 0.0158228 0.916099 0.859983 0.822066 0.908732 0.907969 4630 4632 chr18 14002455 14006946 chr18:14002455-14006946:-:L1P1:REF 11 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.793443 0.272881 0.541451 0.586493 0.470085 0.350427 0.0122324 0.964143 0.569767 0.673759 0.858757 4631 4633 chr18 14037597 14043715 chr18:14037597-14043715:-:L1PA5:REF 9 - L1PA5 REF full-length HepG2,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.395973 0.593023 0.0714286 0.0340909 0.925 0.838235 0.627907 0.56044 0.857143 4632 4634 chr18 14064986 14071100 chr18:14064986-14071100:+:L1PA5:REF 12 + L1PA5 REF full-length ZNF519 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.705128 0.764493 0.640566 0.793315 0.805987 0.568761 0.00481928 0.967105 0.969428 0.943005 0.872642 0.942634 4633 4635 chr18 14162672 14168081 chr18:14162672-14168081:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889722 0.323715 0.580678 0.679291 0.574594 0.762681 0.00490998 0.842803 0.806039 0.688406 0.897222 0.788187 4634 4636 chr18 14988441 14988956 chr18:14988441-14988956:-:L1P1:REF 9 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,HCT116,IMR90,HEK293 0.924242 0.475962 0.491525 0.64433 0.214286 0.0 0.597403 0.461538 0.721649 4635 4637 chr18 15095247 15095249 chr18:15095247-15095249:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip3191,1KGP:L1_umary_LINE1_2792 HCT116 0.702194 Beck_2010:0.0 Gardner_2017:1 4636 4638 chr18 15193133 15193135 chr18:15193133-15193135:-:L1HS:NONREF 3 - L1HS UNKNR 2102Ep,HepG2,H1 0.219572 0.749186 0.772177 4637 4639 chr18 15229094 15235249 chr18:15229094-15235249:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.801354 0.0401189 0.487026 0.584124 0.171875 0.134615 0.0208333 0.370607 0.574225 0.585209 0.42233 0.783333 4638 4640 chr18 21882938 21889079 chr18:21882938-21889079:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.857912 0.675483 0.688391 0.752801 0.920455 0.769944 0.034749 0.955108 0.968719 0.709812 0.901149 0.92144 4639 4641 chr18 22529636 22535670 chr18:22529636-22535670:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.139456 0.845557 0.916795 0.953351 0.933262 0.929688 0.32862 0.960894 0.957831 0.94108 0.976879 0.944444 4640 4642 chr18 22748310 22749834 chr18:22748310-22749834:+:L1P3:REF 12 + L1P3 REF 3prime-truncated LOC101927571 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.924242 0.597222 0.822967 0.886463 0.916479 0.944444 0.00645161 0.935185 0.984277 0.886667 0.96129 0.967742 4641 4643 chr18 22885395 22891520 chr18:22885395-22891520:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.934592 0.825668 0.906397 0.908874 0.936033 0.947467 0.014038 0.780294 0.940397 0.958781 0.948962 0.95493 4642 4644 chr18 24619042 24625072 chr18:24619042-24625072:-:L1PA2:REF 12 - L1PA2 REF full-length LINC01915 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.202847 0.658609 0.915918 0.967668 0.872311 0.754593 0.0276356 0.911647 0.87175 0.961268 0.945325 0.921697 4643 4645 chr18 25266452 25272922 chr18:25266452-25272922:+:L1PA7:REF 5 + L1PA7 REF full-length ZNF521 HepG2,MRC5,HeLaS3,K562,HCT116 0.557789 0.595412 0.55 0.121429 0.541667 4644 4646 chr18 27279551 27285578 chr18:27279551-27285578:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.907021 0.560923 0.716881 0.718974 0.915139 0.554439 0.0101254 0.519789 0.951923 0.733618 0.896378 0.965591 4645 4647 chr18 27510008 27516039 chr18:27510008-27516039:+:L1PA2:REF 7 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7 0.0605227 0.0156766 0.661157 0.748538 0.700288 0.0213904 0.363636 4646 4648 chr18 27737726 27743750 chr18:27737726-27743750:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.445986 0.718527 0.886833 0.886806 0.941572 0.599665 0.0235525 0.783654 0.987072 0.877104 0.956229 0.950086 4647 4649 chr18 28240443 28246440 chr18:28240443-28246440:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0571429 0.927158 0.922419 0.959241 0.907662 0.025463 0.874773 0.941418 0.911208 0.975858 0.971875 4648 4650 chr18 28416544 28422561 chr18:28416544-28422561:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0822544 0.852224 0.839534 0.865788 0.888665 0.896183 0.0259638 0.403402 0.98747 0.89335 0.973381 0.958763 4649 4651 chr18 31347968 31353996 chr18:31347968-31353996:-:L1PA2:REF 12 - L1PA2 REF full-length DSG1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.524062 0.960905 0.668695 0.632926 0.863067 0.843724 0.0396429 0.87159 0.932225 0.785604 0.876686 0.858357 4650 4652 chr18 32228075 32233934 chr18:32228075-32233934:-:L1PA3:REF 11 - L1PA3 REF full-length MEP1B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.9298 0.832675 0.767077 0.878133 0.832938 0.8998 0.868676 0.927547 0.898077 0.853134 0.954167 4651 4653 chr18 32856626 32862684 chr18:32856626-32862684:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0379089 0.900536 0.797118 0.816569 0.509116 0.814727 0.0304073 0.48 0.851772 0.81935 0.876412 0.850858 4652 4654 chr18 33786878 33793028 chr18:33786878-33793028:+:L1PA3:REF 2 + L1PA3 REF full-length MCF7,IMR90 0.307692 0.725146 4653 4655 chr18 34331115 34337159 chr18:34331115-34337159:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0660857 0.579733 0.771329 0.829595 0.878676 0.642857 0.00582147 0.288793 0.914503 0.822985 0.952676 0.837315 4654 4656 chr18 34552378 34558395 chr18:34552378-34558395:-:L1PA2:REF 12 - L1PA2 REF full-length DTNA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.676932 0.95732 0.793233 0.871827 0.967784 0.828084 0.0122951 0.675147 0.392985 0.884354 0.970387 0.959128 4655 4657 chr18 34894774 34900928 chr18:34894774-34900928:+:L1PA3:REF 12 + L1PA3 REF full-length DTNA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883218 0.978292 0.781399 0.920829 0.898795 0.808181 0.033675 0.961231 0.967364 0.905849 0.953488 0.970032 4656 4658 chr18 35205779 35211809 chr18:35205779-35211809:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.21521 0.9468 0.913682 0.954044 0.960895 0.952532 0.825029 0.974583 0.985376 0.948124 0.966974 0.974919 4657 4659 chr18 35760308 35766412 chr18:35760308-35766412:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90673 0.89618 0.875878 0.899249 0.874145 0.40226 0.351044 0.144107 0.953103 0.863273 0.878218 0.861197 4658 4660 chr18 35790620 35796748 chr18:35790620-35796748:+:L1PA5:REF 3 + L1PA5 REF full-length HepG2,MRC5,HEK293T 0.568306 0.719807 0.858156 4659 4661 chr18 36235134 36241152 chr18:36235134-36241152:-:L1PA3:REF 8 - L1PA3 REF full-length MOCOS 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,IMR90,HEK293 0.744 0.987952 0.904494 0.945701 0.940299 0.974453 0.949721 0.983193 4660 4662 chr18 37111556 37117653 chr18:37111556-37117653:+:L1PA5:REF 1 + L1PA5 REF full-length KIAA1328 MRC5 0.0 4661 4663 chr18 37218553 37219963 chr18:37218553-37219963:-:L1P2:REF 6 - L1P2 REF 3prime-truncated KIAA1328 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562 0.590909 0.666667 0.65625 0.5 0.269231 0.0294118 4662 4664 chr18 37819737 37825798 chr18:37819737-37825798:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0739595 0.749723 0.786765 0.815105 0.700558 0.692815 0.0189467 0.80411 0.811747 0.801233 0.831729 0.85362 4663 4665 chr18 39565592 39571600 chr18:39565592-39571600:+:L1PA2:REF 12 + L1PA2 REF full-length MIR924HG 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.3827 0.974945 0.955367 0.958653 0.927211 0.98338 0.0634278 0.893939 0.930851 0.938462 0.902135 0.95935 4664 4666 chr18 39924369 39930434 chr18:39924369-39930434:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0401116 0.803109 0.84048 0.878596 0.656708 0.971662 0.0122517 0.71615 0.880983 0.877364 0.84317 0.85342 4665 4667 chr18 40114089 40120205 chr18:40114089-40120205:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863501 0.147595 0.297101 0.665198 0.555732 0.283333 0.0151188 0.108374 0.536341 0.548837 0.570492 0.827103 4666 4668 chr18 40187639 40193657 chr18:40187639-40193657:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.640751 0.839629 0.853122 0.867486 0.86248 0.846262 0.0363128 0.769231 0.90684 0.919877 0.895514 0.905782 4667 4669 chr18 41631742 41637769 chr18:41631742-41637769:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0432489 0.753498 0.766562 0.830078 0.336735 0.971963 0.00823723 0.873832 0.95201 0.905963 0.140173 0.366667 4668 4670 chr18 41775014 41781045 chr18:41775014-41781045:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.185893 0.826737 0.864865 0.826351 0.724902 0.921376 0.0211123 0.820418 0.865442 0.897657 0.943287 0.921811 4669 4671 chr18 42316969 42316971 chr18:42316969-42316971:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip3258,Philippe:EXP_ID_0538 LINC00907 IMR90 0.834091 4670 4672 chr18 42660319 42666556 chr18:42660319-42666556:+:L1PA4:REF 12 + L1PA4 REF full-length LINC00907 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.932059 0.672275 0.678469 0.727363 0.877437 0.46841 0.0148048 0.348285 0.649912 0.676056 0.845013 0.932558 4671 4673 chr18 43983985 43990386 chr18:43983985-43990386:+:L1PA6:REF 10 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293,H1 0.576923 0.125984 0.782123 0.916318 0.543478 0.103448 0.363208 0.5 0.867089 1.0 4672 4674 chr18 44021279 44024826 chr18:44021279-44024826:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.851698 0.664193 0.856659 0.900621 0.578765 0.460624 0.0097371 0.793187 0.572747 0.82906 0.857552 0.889971 4673 4675 chr18 45694472 45700593 chr18:45694472-45700593:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.900919 0.876656 0.961336 0.977127 0.908602 0.947183 0.651116 0.930657 0.971665 0.961606 0.967213 0.975469 4674 4676 chr18 45794070 45800209 chr18:45794070-45800209:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.875 0.545332 0.950593 0.985743 0.815416 0.954082 0.0294785 0.949664 0.971209 0.980519 0.953125 0.969231 4675 4677 chr18 47637319 47643479 chr18:47637319-47643479:+:L1PA3:REF 8 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,HEK293 0.963504 0.379121 0.464789 0.505682 0.411765 0.265823 0.504 0.648936 4676 4678 chr18 47660373 47666427 chr18:47660373-47666427:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.537313 0.891278 0.790349 0.820128 0.760218 0.612069 0.146113 0.956701 0.877464 0.858785 0.906149 0.93318 4677 4679 chr18 49215768 49223192 chr18:49215768-49223192:+:L1PA3:REF 12 + L1PA3 REF full-length DYM 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.914846 0.98101 0.978507 0.975334 0.982193 0.98218 0.917395 0.977 0.98067 0.979115 0.98065 0.980324 4678 4680 chr18 49710498 49716912 chr18:49710498-49716912:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868074 0.831793 0.82963 0.864067 0.921053 0.69375 0.0159236 0.978378 0.981025 0.868571 0.974874 0.934615 4679 4681 chr18 50343959 50349987 chr18:50343959-50349987:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0841333 0.876333 0.745808 0.872516 0.923117 0.819534 0.694184 0.91116 0.979011 0.859879 0.933948 0.937438 Brouha_2003:0.0 4680 4682 chr18 50500000 50503218 chr18:50500000-50503218:-:L1P2:REF 1 - L1P2 REF 3prime-truncated MRC5 0.0288462 4681 4683 chr18 51689847 51689849 chr18:51689847-51689849:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip3288,Philippe:EXP_ID_0540 HEK293T,HEK293 0.359088 0.71686 4682 4684 chr18 51700979 51706730 chr18:51700979-51706730:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.815725 0.312883 0.75 0.436703 0.213873 0.387283 0.0331325 0.0717489 0.736 0.723404 0.553991 0.933036 4683 4685 chr18 51740631 51746665 chr18:51740631-51746665:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.468531 0.822674 0.842313 0.827068 0.662839 0.823944 0.0126437 0.829032 0.945255 0.925 0.879824 0.964824 4684 4686 chr18 53255214 53261351 chr18:53255214-53261351:-:L1PA4:REF 4 - L1PA4 REF full-length DCC HepG2,BJ,MRC5,HCT116 0.03125 0.466667 0.352113 0.047619 4685 4687 chr18 53511450 53517443 chr18:53511450-53517443:+:L1PA3:REF 12 + L1PA3 REF full-length DCC 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.113849 0.718022 0.797705 0.719939 0.612722 0.563813 0.00980392 0.760163 0.775032 0.808323 0.885737 0.960328 4686 4688 chr18 53899354 53899356 chr18:53899354-53899356:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip3300,1KGP:L1_umary_LINE1_2824 HeLaS3 0.620202 4687 4689 chr18 54664206 54670337 chr18:54664206-54670337:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885484 0.655447 0.864964 0.895182 0.714563 0.792507 0.138365 0.918605 0.916168 0.90107 0.922414 0.970674 4688 4690 chr18 55715484 55721529 chr18:55715484-55721529:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.077745 0.829513 0.951851 0.976775 0.0460883 0.782538 0.895973 0.603942 0.897103 0.962042 0.967176 0.815689 4689 4691 chr18 55887412 55893439 chr18:55887412-55893439:-:L1PA3:REF 12 - L1PA3 REF full-length LINC01416 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0245902 0.67231 0.964871 0.962782 0.0199778 0.631884 0.00484262 0.953571 0.778035 0.856187 0.948864 0.595455 4690 4692 chr18 56525569 56531695 chr18:56525569-56531695:+:L1PA3:REF 6 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HCT116,HEK293 0.761905 0.386364 0.784615 0.739535 0.321839 0.714286 4691 4693 chr18 57259696 57265728 chr18:57259696-57265728:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.888785 0.630913 0.548943 0.604278 0.301676 0.674699 0.00137552 0.871069 0.491793 0.650901 0.72948 0.914657 4692 4694 chr18 57719248 57725264 chr18:57719248-57725264:+:L1PA2:REF 12 + L1PA2 REF full-length ATP8B1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.320563 0.98149 0.963333 0.980975 0.941818 0.943316 0.676233 0.929607 0.984756 0.980698 0.967912 0.956597 4693 4695 chr18 59256648 59262781 chr18:59256648-59262781:+:L1PA4:REF 12 + L1PA4 REF full-length RAX 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.784722 0.416529 0.679634 0.668571 0.434783 0.565 0.0416667 0.861635 0.629797 0.594595 0.623188 0.808081 4694 4696 chr18 59403939 59409970 chr18:59403939-59409970:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.117268 0.854617 0.952107 0.957681 0.94983 0.874515 0.334107 0.855505 0.954023 0.949383 0.960285 0.866876 Helman_2013:1,Rodriguez-Martin_2020:35,Tubio_2014:10 4695 4697 chr18 59771359 59777443 chr18:59771359-59777443:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.726776 0.741333 0.977124 0.883792 0.857616 0.893617 0.0 0.914062 0.835484 0.819209 0.914141 0.861842 4696 4698 chr18 60029678 60035707 chr18:60029678-60035707:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.340667 0.838133 0.923077 0.885331 0.640644 0.500662 0.764255 0.946451 0.936657 0.875 0.967078 0.901887 4697 4699 chr18 61310603 61316739 chr18:61310603-61316739:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.94125 0.725843 0.799492 0.777281 0.507225 0.711765 0.0118577 0.876543 0.959079 0.725338 0.856618 0.901786 4698 4700 chr18 61512674 61515526 chr18:61512674-61515526:-:L1HS:REF 4 - L1HS REF 3prime-truncated CDH20 HepG2,BJ,MRC5,HCT116 0.698745 0.866197 0.920875 0.866426 4699 4701 chr18 61517291 61517688 chr18:61517291-61517688:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated CDH20 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.85 0.0122951 0.510101 0.604457 0.155844 0.0147059 0.0 0.442857 0.724868 0.466667 0.553459 0.888889 4700 4702 chr18 62906292 62912314 chr18:62906292-62912314:+:L1HS:REF 12 + L1HS REF full-length PHLPP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.219492 0.979866 0.973276 0.985952 0.98135 0.98426 0.969459 0.967113 0.971298 0.976109 0.98051 0.930759 4701 4703 chr18 64226384 64232470 chr18:64226384-64232470:-:L1PA4:REF 12 - L1PA4 REF full-length LINC01924 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.913876 0.343384 0.625862 0.672606 0.128814 0.232227 0.00408163 0.703488 0.809756 0.638037 0.803815 0.915094 4702 4704 chr18 64424277 64430404 chr18:64424277-64430404:+:L1PA5:REF 12 + L1PA5 REF full-length LINC01924 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.836538 0.0273109 0.334459 0.497326 0.057971 0.35 0.00568182 0.197917 0.637363 0.567308 0.503906 0.97619 4703 4705 chr18 64572565 64578676 chr18:64572565-64578676:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890459 0.4 0.527211 0.58284 0.39645 0.222222 0.0 0.385185 0.662281 0.58046 0.558233 0.889571 4704 4706 chr18 65166414 65172446 chr18:65166414-65172446:+:L1PA5:REF 6 + L1PA5 REF full-length HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.206897 0.333333 0.490196 0.048 0.586207 0.128205 4705 4707 chr18 66715074 66721105 chr18:66715074-66721105:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878095 0.208729 0.606383 0.62462 0.269103 0.657224 0.0 0.0394737 0.879789 0.564103 0.67234 0.950178 4706 4708 chr18 67603633 67605600 chr18:67603633-67605600:+:L1HS:REF 11 + L1HS REF 3prime-truncated LOC643542 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.948248 0.752768 0.936888 0.967294 0.192585 0.970248 0.00516796 0.85016 0.968711 0.862617 0.978344 4707 4709 chr18 68784834 68790853 chr18:68784834-68790853:-:L1PA2:REF 12 - L1PA2 REF full-length CCDC102B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.125664 0.85037 0.963913 0.940458 0.0458716 0.956332 0.0129765 0.566279 0.94251 0.980392 0.918482 0.950386 4708 4710 chr18 70746549 70752581 chr18:70746549-70752581:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.160251 0.746096 0.726036 0.700039 0.520183 0.557971 0.0127226 0.698774 0.791195 0.787559 0.677189 0.79223 Brouha_2003:0.0 4709 4711 chr18 71092824 71098582 chr18:71092824-71098582:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.766355 0.0253623 0.347561 0.489754 0.00961538 0.19403 0.0 0.0126582 0.375 0.480769 0.333333 0.482143 4710 4712 chr18 72966526 72972556 chr18:72966526-72972556:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.146446 0.631324 0.78541 0.713479 0.507402 0.38724 0.0114591 0.869816 0.553486 0.841398 0.687412 0.742197 4711 4713 chr18 74052958 74059379 chr18:74052958-74059379:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856209 0.185185 0.411765 0.458333 0.166667 0.0 0.0 0.648148 0.0705882 0.296296 0.419355 0.785185 4712 4714 chr18 75578680 75578682 chr18:75578680-75578682:-:L1HS:NONREF 2 - L1HS KNR euL1db:mrip3389,Philippe:EXP_ID_0560 HepG2,H1 0.790323 0.983914 Rodriguez-Martin_2020:6 4713 4715 chr18 75846851 75852883 chr18:75846851-75852883:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.246944 0.901649 0.87239 0.822905 0.666667 0.783439 0.0317259 0.952 0.929749 0.913043 0.924226 0.827778 4714 4716 chr18 77415976 77422002 chr18:77415976-77422002:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0986079 0.330971 0.629764 0.646572 0.58867 0.694501 0.0222222 0.857895 0.795 0.768473 0.927083 0.296296 4715 4717 chr18 79284621 79290766 chr18:79284621-79290766:-:L1PA3:REF 12 - L1PA3 REF full-length ATP9B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.93047 0.933604 0.867589 0.984055 0.962525 0.763713 0.740331 0.115894 0.97379 0.95339 0.97619 0.976027 4716 4718 chr19 146476 152899 chr19:146476-152899:+:L1PA7:REF 3 + L1PA7 REF full-length MRC5,K562,HCT116 0.7 0.3 0.785714 4717 4719 chr19 8795844 8801996 chr19:8795844-8801996:-:L1PA3:REF 12 - L1PA3 REF full-length ZNF558 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886076 0.598027 0.862928 0.854768 0.474097 0.751037 0.30427 0.891566 0.970888 0.876448 0.670732 0.865672 4718 4720 chr19 9397704 9403756 chr19:9397704-9403756:+:L1PA4:REF 12 + L1PA4 REF full-length ZNF266 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.79916 0.37833 0.653355 0.685648 0.334315 0.540724 0.0149413 0.859023 0.655546 0.75453 0.740964 0.822873 4719 4721 chr19 12004811 12010815 chr19:12004811-12010815:-:L1PA3:REF 12 - L1PA3 REF full-length ZNF433-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.882665 0.913414 0.964695 0.936709 0.748418 0.833887 0.396425 0.916551 0.822222 0.997191 0.892487 0.976628 4720 4722 chr19 20490329 20496601 chr19:20490329-20496601:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.819853 0.233333 0.490494 0.648649 0.017094 0.0652174 0.025 0.610687 0.112554 0.553191 0.14717 0.863636 4721 4723 chr19 20627781 20633939 chr19:20627781-20633939:-:L1PA4:REF 12 - L1PA4 REF full-length ZNF626 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.870766 0.737252 0.9 0.81131 0.127485 0.166329 0.34233 0.745192 0.381733 0.925087 0.250696 0.969925 4722 4724 chr19 20807724 20813827 chr19:20807724-20813827:+:L1PA3:REF 12 + L1PA3 REF full-length ZNF66 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.744048 0.837121 0.822857 0.881002 0.456 0.0671141 0.0307692 0.90625 0.485714 0.991304 0.615789 0.904348 4723 4725 chr19 20841021 20847152 chr19:20841021-20847152:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.87596 0.71627 0.749296 0.808889 0.259779 0.476615 0.00917431 0.864762 0.488789 0.892523 0.743083 0.872596 4724 4726 chr19 21953756 21956965 chr19:21953756-21956965:-:L1P2:REF 9 - L1P2 REF 3prime-truncated ZNF208 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293 0.846154 0.0 0.2 0.0547945 0.0769231 0.0 0.0 0.0 0.0 4725 4727 chr19 21977275 21982075 chr19:21977275-21982075:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated ZNF208 MRC5 0.5 4726 4728 chr19 22184056 22190330 chr19:22184056-22190330:+:L1PA8:REF 12 + L1PA8 REF full-length ZNF676 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.811159 0.0225989 0.227513 0.182292 0.015748 0.0266667 0.0 0.108696 0.110465 0.148936 0.0174825 0.364341 4727 4729 chr19 22383282 22385064 chr19:22383282-22385064:-:L1PA5:REF 11 - L1PA5 REF 3prime-truncated ZNF98 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.685897 0.0131579 0.266667 0.458333 0.0 0.0131579 0.0 0.340909 0.0288462 0.5 0.00763359 4728 4730 chr19 22671703 22673468 chr19:22671703-22673468:+:L1PA5:REF 10 + L1PA5 REF 3prime-truncated ZNF492 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.895652 0.0230769 0.693333 0.727273 0.0833333 0.0 0.545455 0.452632 0.927273 0.15625 4729 4731 chr19 23335045 23335952 chr19:23335045-23335952:-:L1P2:REF 3 - L1P2 REF 3prime-truncated HeLaS3,K562,HCT116 0.821429 0.0740741 0.9 4730 4732 chr19 23430132 23436285 chr19:23430132-23436285:-:L1PA3:REF 2 - L1PA3 REF full-length 2102Ep,MRC5 0.841584 0.722628 4731 4733 chr19 23613435 23619660 chr19:23613435-23619660:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.875895 0.294221 0.641256 0.624176 0.0204604 0.11437 0.0114679 0.900602 0.37406 0.642633 0.337778 0.811905 4732 4734 chr19 23890445 23896455 chr19:23890445-23896455:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.832975 0.320361 0.803867 0.678449 0.554054 0.671766 0.0243363 0.949219 0.768701 0.818376 0.772532 0.789873 4733 4735 chr19 24013378 24019477 chr19:24013378-24019477:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.852964 0.549469 0.720824 0.725806 0.355435 0.607815 0.0123916 0.780604 0.58642 0.69898 0.710483 0.775176 4734 4736 chr19 24115697 24117843 chr19:24115697-24117843:-:L1P1:REF 12 - L1P1 REF 3prime-truncated ZNF254 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909793 0.982807 0.984064 0.981095 0.930539 0.98189 0.769231 0.979029 0.776632 0.983587 0.967467 0.924225 4735 4737 chr19 27600020 27603036 chr19:27600020-27603036:-:L1PA4:REF 1 - L1PA4 REF 3prime-truncated HepG2 0.0 4736 4738 chr19 28050235 28050565 chr19:28050235-28050565:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.823529 0.141176 0.3125 0.266247 0.177914 0.103448 0.0496894 0.947368 0.245989 0.190476 0.791667 0.861538 4737 4739 chr19 28087649 28092997 chr19:28087649-28092997:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.836515 0.14528 0.516224 0.4855 0.240497 0.107059 0.0115607 0.0811138 0.319966 0.507959 0.745707 0.876755 4738 4740 chr19 28177582 28183612 chr19:28177582-28183612:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895538 0.313178 0.592624 0.63597 0.289738 0.208524 0.0133185 0.767181 0.633869 0.593429 0.730858 0.918251 4739 4741 chr19 28269706 28275728 chr19:28269706-28275728:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.695783 0.202857 0.562162 0.471831 0.132353 0.187879 0.0839695 0.576803 0.532787 0.725 0.724638 4740 4742 chr19 29132609 29138743 chr19:29132609-29138743:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.845878 0.589796 0.54386 0.618182 0.356354 0.381503 0.0163934 0.777027 0.657407 0.652632 0.575949 0.827338 4741 4743 chr19 29225779 29231807 chr19:29225779-29231807:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.847269 0.487346 0.747166 0.744898 0.65917 0.34551 0.0283401 0.888889 0.750256 0.830769 0.838258 0.890443 4742 4744 chr19 29348349 29354473 chr19:29348349-29354473:+:L1PA4:REF 12 + L1PA4 REF full-length LOC284395 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.747423 0.0138504 0.115 0.0909091 0.00717703 0.00840336 0.0105634 0.275556 0.0310734 0.0886076 0.0788913 0.590244 4743 4745 chr19 29459290 29465188 chr19:29459290-29465188:+:L1PA2:REF 9 + L1PA2 REF full-length LOC284395 2102Ep,HepG2,BJ,MRC5,K562,MCF7,HCT116,IMR90,H1 0.478878 0.742268 0.846397 0.837177 0.0279395 0.923661 0.925967 0.839587 0.916208 4744 4746 chr19 32587512 32593595 chr19:32587512-32593595:-:L1PA3:REF 5 - L1PA3 REF full-length PDCD5 2102Ep,HepG2,MRC5,HEK293T,HCT116 0.65 0.983051 0.888298 0.992126 0.886792 4745 4747 chr19 32846037 32852182 chr19:32846037-32852182:+:L1PA4:REF 8 + L1PA4 REF full-length SLC7A9 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,HEK293 0.6875 0.955446 0.875 0.808023 0.708333 0.373626 0.935 0.821918 4746 4748 chr19 34617843 34618159 chr19:34617843-34618159:-:L1P1:REF 12 - L1P1 REF 3prime-truncated SCGB1B2P 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.84839 0.556285 0.697449 0.735975 0.352444 0.587793 0.00783436 0.88743 0.861179 0.615094 0.707612 0.83871 4747 4749 chr19 34696378 34699566 chr19:34696378-34699566:+:L1P3:REF 1 + L1P3 REF 3prime-truncated ZNF302 MRC5 0.0128205 4748 4750 chr19 34700381 34706494 chr19:34700381-34706494:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.778032 0.392055 0.536264 0.554753 0.042735 0.0428571 0.00496278 0.39924 0.722008 0.478992 0.366197 0.72449 4749 4751 chr19 34860177 34866213 chr19:34860177-34866213:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0265781 0.0122825 0.0554442 0.0320724 0.0465269 0.743202 0.00540123 0.00659755 0.383067 0.0463215 0.159091 0.0286195 4750 4752 chr19 36697923 36704066 chr19:36697923-36704066:-:L1PA3:REF 10 - L1PA3 REF full-length ZNF567 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.957143 0.967568 0.981818 0.982538 0.963526 0.983333 0.625926 0.9875 0.984211 0.994429 4751 4753 chr19 37048721 37054503 chr19:37048721-37054503:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.882883 0.0822785 0.552083 0.594595 0.0630631 0.0555556 0.0133333 0.65 0.0804598 0.618182 0.212963 0.651163 4752 4754 chr19 37116469 37122625 chr19:37116469-37122625:+:L1PA4:REF 12 + L1PA4 REF full-length ZNF420 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871105 0.986111 0.980167 0.974915 0.96158 0.991055 0.463448 0.958926 0.684066 0.987245 0.953224 0.938947 4753 4755 chr19 37837502 37843533 chr19:37837502-37843533:+:L1PA2:REF 12 + L1PA2 REF full-length LOC100631378 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.149419 0.804691 0.756467 0.86501 0.727311 0.834789 0.0350672 0.891224 0.894366 0.751331 0.775902 0.861565 4754 4756 chr19 39649212 39655243 chr19:39649212-39655243:+:L1PA6:REF 11 + L1PA6 REF full-length LGALS16 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.5 0.0263158 0.0425532 0.0609756 0.00740741 0.0204082 0.0 0.0833333 0.0 0.0952381 0.120567 4755 4757 chr19 40037915 40044054 chr19:40037915-40044054:-:L1PA4:REF 12 - L1PA4 REF full-length ZNF780B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.944649 0.980337 0.969414 0.974242 0.748808 0.817784 0.733255 0.963658 0.963889 0.993952 0.956179 0.968028 4756 4758 chr19 40912707 40917997 chr19:40912707-40917997:+:L1PA5:REF 1 + L1PA5 REF 3prime-truncated CYP2B7P MRC5 0.783333 4757 4759 chr19 41033056 41036044 chr19:41033056-41036044:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.847251 0.197623 0.48722 0.52832 0.445743 0.416988 0.010352 0.934783 0.92 0.596667 0.908932 0.843333 4758 4760 chr19 41098534 41102820 chr19:41098534-41102820:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated CYP2A13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886076 0.0105263 0.365079 0.491329 0.0531915 0.0238095 0.0166667 0.73913 0.430233 0.4375 0.684211 0.789474 4759 4761 chr19 42769102 42775111 chr19:42769102-42775111:-:L1PA3:REF 12 - L1PA3 REF full-length PSG8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.349593 0.336207 0.886326 0.89307 0.432323 0.589354 0.0118265 0.739574 0.760456 0.87949 0.896919 0.687179 4760 4762 chr19 43864494 43867300 chr19:43864494-43867300:-:L1HS:REF 12 - L1HS REF 3prime-truncated ZNF404 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.446254 0.827782 0.861134 0.92264 0.733126 0.850662 0.0324513 0.92788 0.92675 0.906917 0.864835 0.958845 4761 4763 chr19 53205936 53210763 chr19:53205936-53210763:-:L1PA7:REF 9 - L1PA7 REF full-length ZNF818P 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.980769 0.453704 0.944444 0.940476 0.0138889 0.953488 0.62931 0.958333 0.238636 4762 4764 chr19 55822401 55828429 chr19:55822401-55828429:+:L1PA2:REF 8 + L1PA2 REF full-length NLRP11 2102Ep,BJ,MRC5,HEK293T,K562,MCF7,IMR90,HEK293 0.103738 0.792398 0.7393 0.506922 0.0192102 0.807775 0.709497 0.837678 4763 4765 chr19 56335422 56337734 chr19:56335422-56337734:-:L1P1:REF 1 - L1P1 REF 3prime-truncated ZSCAN5A MRC5 0.555556 4764 4766 chr20 129964 135977 chr20:129964-135977:+:L1PA2:REF 12 + L1PA2 REF full-length DEFB126 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0521137 0.91119 0.812571 0.861809 0.793326 0.744361 0.597738 0.948087 0.926829 0.824451 0.837242 0.936192 4765 4767 chr20 2500825 2506958 chr20:2500825-2506958:+:L1PA4:REF 12 + L1PA4 REF full-length ZNF343 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.922141 0.979508 0.980787 0.988712 0.970865 0.979592 0.962406 0.965699 0.977574 0.988562 0.979567 0.973301 4766 4768 chr20 4283734 4289881 chr20:4283734-4289881:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873045 0.783333 0.906769 0.883466 0.657658 0.84141 0.228535 0.015534 0.655959 0.878676 0.925484 0.874296 4767 4769 chr20 4500000 4501964 chr20:4500000-4501964:-:L1P2:REF 10 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.832861 0.139918 0.924242 0.933333 0.0833333 0.158537 0.0 0.965812 0.868056 0.822967 4768 4770 chr20 5235769 5242179 chr20:5235769-5242179:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.827684 0.0916031 0.372727 0.309693 0.0456621 0.119048 0.0357143 0.383562 0.364035 0.383721 0.612717 0.820144 4769 4771 chr20 6315821 6321844 chr20:6315821-6321844:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.0205382 0.84127 0.758921 0.813559 0.489064 0.716942 0.944444 0.795518 0.668172 0.737333 0.766316 4770 4772 chr20 7116194 7122199 chr20:7116194-7122199:-:L1HS:REF 11 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.155206 0.871951 0.862293 0.928953 0.781818 0.898451 0.901027 0.866966 0.865449 0.937113 0.973025 Brouha_2003:2.4 4771 4773 chr20 7957165 7958671 chr20:7957165-7958671:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.874564 0.165865 0.588235 0.713333 0.238095 0.167742 0.0 0.663934 0.866667 0.586207 0.582492 0.862222 4772 4774 chr20 8108866 8114917 chr20:8108866-8114917:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0487239 0.0108041 0.896138 0.894763 0.104067 0.0122526 0.0138045 0.285348 0.00515668 0.946166 0.925779 0.729868 4773 4775 chr20 8595101 8601127 chr20:8595101-8601127:-:L1PA2:REF 12 - L1PA2 REF full-length PLCB1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0363483 0.984098 0.871756 0.97659 0.00978136 0.286203 0.0487596 0.957668 0.00617631 0.914352 0.909091 0.653659 4774 4776 chr20 11632779 11638837 chr20:11632779-11638837:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.105704 0.738955 0.794998 0.848089 0.705352 0.908113 0.00513347 0.911357 0.897179 0.828142 0.917578 0.908482 Brouha_2003:0.0 4775 4777 chr20 12123711 12129700 chr20:12123711-12129700:-:L1PA3:REF 7 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293 0.419192 0.536957 0.700855 0.619141 0.294479 0.755102 0.925926 4776 4778 chr20 12443116 12449140 chr20:12443116-12449140:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.771001 0.681584 0.817686 0.776952 0.390783 0.854305 0.0313765 0.690909 0.847075 0.848855 0.757783 0.934729 4777 4779 chr20 12582507 12588531 chr20:12582507-12588531:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.745223 0.698526 0.703875 0.740852 0.535629 0.741722 0.0124417 0.857546 0.758718 0.700246 0.858991 0.897516 4778 4780 chr20 12801017 12807044 chr20:12801017-12807044:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.448368 0.665742 0.750738 0.689993 0.629139 0.736721 0.0356436 0.726787 0.694131 0.696133 0.802749 0.865025 Brouha_2003:0.0 4779 4781 chr20 13052072 13053986 chr20:13052072-13053986:+:L1P3:REF 8 + L1P3 REF 3prime-truncated SPTLC3 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,IMR90,HEK293 0.908046 0.98324 0.68 0.876761 0.333333 0.981818 0.817391 0.925926 4780 4782 chr20 16519714 16522903 chr20:16519714-16522903:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated KIF16B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.675159 0.795752 0.821739 0.900958 0.914286 0.859649 0.89071 0.638298 0.796491 0.775194 0.983871 0.769841 4781 4783 chr20 17114790 17120918 chr20:17114790-17120918:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.783155 0.377087 0.576414 0.608988 0.389711 0.440141 0.0243902 0.666929 0.811741 0.632727 0.742143 0.787704 4782 4784 chr20 17880292 17880294 chr20:17880292-17880294:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip4348,1KGP:L1_umary_LINE1_2915,Philippe:EXP_ID_0716 HCT116 0.965957 Beck_2010:0.0 4783 4785 chr20 18332912 18339088 chr20:18332912-18339088:+:L1PA4:REF 11 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.813214 0.859206 0.940257 0.83293 0.77037 0.248649 0.895006 0.904244 0.801181 0.976359 0.90106 4784 4786 chr20 18755270 18761370 chr20:18755270-18761370:-:L1PA4:REF 12 - L1PA4 REF full-length DTD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.927739 0.959133 0.960847 0.965578 0.930818 0.944672 0.325862 0.973138 0.985261 0.96728 0.963612 0.953061 4785 4787 chr20 18935844 18942312 chr20:18935844-18942312:-:L1PA7:REF 12 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.876923 0.05 0.615385 0.381818 0.0540541 0.0 0.0454545 0.9 0.825 0.636364 0.8 0.909091 4786 4788 chr20 21887655 21893685 chr20:21887655-21893685:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.595415 0.690268 0.67991 0.495029 0.388975 0.499253 0.0209556 0.561705 0.720391 0.759091 0.703954 0.789074 4787 4789 chr20 21910853 21916881 chr20:21910853-21916881:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.221185 0.634078 0.706696 0.682662 0.250633 0.637029 0.0142857 0.262832 0.807426 0.698087 0.907392 0.882503 4788 4790 chr20 22009432 22015596 chr20:22009432-22015596:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.847114 0.469472 0.441041 0.464974 0.30203 0.0780781 0.00431965 0.705742 0.259965 0.454286 0.745267 0.871972 4789 4791 chr20 22040464 22046614 chr20:22040464-22046614:-:L1PA3:REF 6 - L1PA3 REF full-length LINC01432 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116 0.666667 0.793427 0.71831 0.67027 0.776923 0.737288 4790 4792 chr20 22114636 22119281 chr20:22114636-22119281:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.303704 0.359788 0.565217 0.321101 0.0481928 0.0526316 0.0138889 0.015625 0.269565 0.333333 0.385542 0.0 4791 4793 chr20 22194131 22200273 chr20:22194131-22200273:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91989 0.0833333 0.330189 0.402318 0.0833333 0.0708447 0.00196464 0.146487 0.25641 0.492843 0.505249 0.868379 4792 4794 chr20 23426108 23432140 chr20:23426108-23432140:+:L1HS:REF 9 + L1HS REF full-length NAPB 2102Ep,HepG2,MRC5,HEK293T,K562,MCF7,HCT116,HEK293,H1 0.14557 0.802721 0.923077 0.195238 0.779793 0.81694 0.944444 0.932249 0.94375 Rodriguez-Martin_2020:29,Tubio_2014:8 4793 4795 chr20 23589308 23595311 chr20:23589308-23595311:+:L1PA2:REF 12 + L1PA2 REF full-length CST9 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.298013 0.975972 0.816396 0.931939 0.925114 0.791985 0.268973 0.974976 0.919881 0.848718 0.948427 0.794486 4794 4796 chr20 23896851 23903006 chr20:23896851-23903006:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.576146 0.295647 0.800857 0.667523 0.610946 0.208884 0.0116641 0.934907 0.783323 0.684685 0.89729 0.899189 4795 4797 chr20 24900605 24906618 chr20:24900605-24906618:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.866133 0.295537 0.625966 0.656749 0.555288 0.22449 0.0075643 0.811034 0.785829 0.667482 0.888037 0.882979 4796 4798 chr20 24921723 24927909 chr20:24921723-24927909:+:L1PA4:REF 11 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.899106 0.736088 0.724884 0.68532 0.506431 0.478873 0.00849257 0.705305 0.617945 0.803704 0.846847 4797 4799 chr20 25165636 25170195 chr20:25165636-25170195:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878307 0.874804 0.691489 0.633427 0.542088 0.777778 0.00900901 0.746988 0.942424 0.777778 0.891566 0.883721 4798 4800 chr20 25719827 25720867 chr20:25719827-25720867:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.894349 0.96627 0.725857 0.881356 0.957237 0.907143 0.0987654 0.955 0.975904 0.666667 0.968127 0.92053 4799 4801 chr20 26233677 26239735 chr20:26233677-26239735:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.71236 0.726557 0.811912 0.807123 0.882462 0.660574 0.0153689 0.887873 0.939853 0.772966 0.946418 0.916514 4800 4802 chr20 29330490 29336615 chr20:29330490-29336615:+:L1PA4:REF 1 + L1PA4 REF full-length MRC5 0.327103 4801 4803 chr20 29366059 29372220 chr20:29366059-29372220:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.577912 0.0277136 0.226331 0.247984 0.126984 0.14378 0.00547445 0.238748 0.313146 0.230444 0.0429448 0.34903 4802 4804 chr20 29466155 29472288 chr20:29466155-29472288:-:L1PA4:REF 12 - L1PA4 REF full-length FRG1EP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.907011 0.260426 0.693182 0.637363 0.226297 0.174497 0.596491 0.338681 0.835807 0.759388 0.720497 0.79878 4803 4805 chr20 29816735 29821369 chr20:29816735-29821369:+:L1P1:REF 1 + L1P1 REF 3prime-truncated MRC5 0.208333 4804 4806 chr20 30944115 30950140 chr20:30944115-30950140:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.810345 0.484108 0.617886 0.603109 0.502101 0.360987 0.013587 0.704225 0.755889 0.672 0.646259 0.781915 4805 4807 chr20 30970455 30976471 chr20:30970455-30976471:-:L1PA3:REF 8 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90 0.714286 0.0714286 0.5 0.51 0.590909 0.666667 0.675 0.625 4806 4808 chr20 30985455 30991464 chr20:30985455-30991464:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.930523 0.638549 0.771499 0.780875 0.914667 0.595615 0.00962696 0.932981 0.944509 0.765101 0.920937 0.918719 4807 4809 chr20 31332715 31338865 chr20:31332715-31338865:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895985 0.561392 0.531616 0.528384 0.256445 0.179337 0.0184941 0.361319 0.69186 0.566234 0.68323 0.845666 4808 4810 chr20 35071283 35077392 chr20:35071283-35077392:-:L1PA5:REF 1 - L1PA5 REF full-length TRPC4AP MRC5 0.982143 4809 4811 chr20 39977475 39977785 chr20:39977475-39977785:+:L1HS:REF 11 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.940103 0.608311 0.882581 0.802484 0.898957 0.00371471 0.98079 0.875629 0.84556 0.940643 0.944297 4810 4812 chr20 40619322 40625356 chr20:40619322-40625356:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0722892 0.52086 0.809384 0.83947 0.392051 0.644139 0.0366972 0.949943 0.942693 0.817896 0.90111 0.858639 4811 4813 chr20 42206269 42212317 chr20:42206269-42212317:+:L1PA2:REF 12 + L1PA2 REF full-length PTPRT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.594776 0.78043 0.822591 0.811659 0.700125 0.640893 0.0973751 0.850396 0.805427 0.798013 0.90768 0.900119 4812 4814 chr20 42614937 42620967 chr20:42614937-42620967:-:L1PA2:REF 12 - L1PA2 REF full-length PTPRT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.707502 0.745089 0.64255 0.779177 0.464058 0.588089 0.0240481 0.730566 0.794627 0.774648 0.822997 0.872818 4813 4815 chr20 43814461 43820491 chr20:43814461-43820491:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.490845 0.813512 0.877012 0.925314 0.844798 0.770224 0.0400859 0.959925 0.968665 0.885417 0.95415 0.963121 4814 4816 chr20 45660033 45666559 chr20:45660033-45666559:-:L1PA3:REF 12 - L1PA3 REF full-length WFDC11 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.947368 0.515625 0.536913 0.587174 0.708955 0.420118 0.0121212 0.947368 0.968 0.682432 0.742647 0.916667 4815 4817 chr20 45687891 45693981 chr20:45687891-45693981:-:L1PA3:REF 12 - L1PA3 REF full-length WFDC10B 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.939911 0.776771 0.802899 0.828869 0.812151 0.787037 0.0122137 0.972638 0.952926 0.8229 0.956822 0.951774 4816 4818 chr20 48587113 48591591 chr20:48587113-48591591:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908163 0.827185 0.837302 0.860477 0.944444 0.759336 0.347328 0.92072 0.842018 0.858447 0.953243 0.96206 4817 4819 chr20 48976983 48983133 chr20:48976983-48983133:-:L1PA6:REF 1 - L1PA6 REF full-length ARFGEF2 HepG2 0.987261 4818 4820 chr20 53455562 53461566 chr20:53455562-53461566:-:L1PA3:REF 12 - L1PA3 REF full-length TSHZ2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880597 0.939597 0.769465 0.847106 0.927871 0.745523 0.094449 0.852144 0.96465 0.84375 0.873675 0.946927 4819 4821 chr20 53472644 53478653 chr20:53472644-53478653:+:L1PA2:REF 12 + L1PA2 REF full-length TSHZ2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901408 0.887286 0.818105 0.875704 0.9326 0.721165 0.327821 0.951847 0.929317 0.836576 0.959366 0.981595 4820 4822 chr20 53503851 53509874 chr20:53503851-53509874:+:L1PA2:REF 12 + L1PA2 REF full-length TSHZ2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0181347 0.313832 0.845669 0.875912 0.432094 0.81475 0.0884009 0.257238 0.522975 0.851554 0.947674 0.746715 4821 4823 chr20 54782510 54788349 chr20:54782510-54788349:+:L1PA3:REF 12 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.81027 0.317507 0.615824 0.578755 0.106788 0.22544 0.0125 0.052149 0.575175 0.646947 0.568878 0.884615 4822 4824 chr20 55220304 55226469 chr20:55220304-55226469:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.7462 0.0438333 0.430464 0.352023 0.0349425 0.328714 0.00812408 0.110857 0.449637 0.499022 0.766349 4823 4825 chr20 55859566 55865521 chr20:55859566-55865521:+:L1HS:REF 5 + L1HS REF full-length 2102Ep,HepG2,BJ,HCT116,IMR90 0.536585 0.678322 0.829638 0.890694 0.869565 4824 4826 chr20 55900229 55906399 chr20:55900229-55906399:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902235 0.396887 0.582329 0.604478 0.214485 0.20442 0.00471698 0.168367 0.451282 0.6 0.494898 0.867841 4825 4827 chr20 56336480 56338612 chr20:56336480-56338612:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890323 0.252475 0.310078 0.289855 0.102113 0.102703 0.010582 0.405405 0.222892 0.401515 0.446429 0.691729 4826 4828 chr20 59531777 59537803 chr20:59531777-59537803:-:L1PA3:REF 9 - L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.78125 0.698198 0.648148 0.597403 0.0607735 0.742105 0.811518 0.779221 0.753623 4827 4829 chr20 61397396 61397400 chr20:61397396-61397400:+:L1HS:NONREF 2 + L1HS KNR euL1db:mrip4464,1KGP:L1_umary_LINE1_2945,Philippe:EXP_ID_0735 CDH4 HepG2,MRC5 0.906375 0.962571 4828 4830 chr21 5348617 5354771 chr21:5348617-5354771:+:L1PA3:REF 2 + L1PA3 REF full-length BJ,MRC5 0.846154 0.775 4829 4831 chr21 8767450 8773597 chr21:8767450-8773597:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.779456 0.429926 0.582068 0.565103 0.206821 0.490371 0.141209 0.273743 0.712988 0.701742 0.505067 0.865681 4830 4832 chr21 10631089 10637220 chr21:10631089-10637220:+:L1PA5:REF 10 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90 0.698246 0.248555 0.438048 0.506311 0.0418848 0.110204 0.00497512 0.0812325 0.266234 0.459155 4831 4833 chr21 13131778 13137920 chr21:13131778-13137920:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.800604 0.0768246 0.501002 0.499065 0.0310219 0.421875 0.00674157 0.0887097 0.47486 0.505263 0.229779 0.77037 4832 4834 chr21 13990185 13995598 chr21:13990185-13995598:-:L1P1:REF 12 - L1P1 REF 3prime-truncated ANKRD20A11P 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.752406 0.475196 0.465432 0.528997 0.320913 0.440945 0.0137405 0.8025 0.612132 0.535088 0.605161 0.698598 4833 4835 chr21 14778901 14785063 chr21:14778901-14785063:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.748408 0.545455 0.429907 0.320988 0.614786 0.142857 0.887701 0.992908 0.113043 0.469697 0.749117 0.935484 4834 4836 chr21 14927082 14933113 chr21:14927082-14933113:+:L1PA2:REF 12 + L1PA2 REF full-length LINC02246 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.188119 0.980231 0.976494 0.957774 0.95109 0.894634 0.820401 0.00802568 0.865497 0.990132 0.95848 0.927944 4835 4837 chr21 14933877 14939951 chr21:14933877-14939951:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.916667 0.996139 0.928839 0.93517 0.930168 0.8125 0.673729 0.979592 0.506494 0.932692 0.953237 0.923664 4836 4838 chr21 17090513 17096530 chr21:17090513-17096530:+:L1PA3:REF 1 + L1PA3 REF full-length MRC5 0.710843 4837 4839 chr21 17327482 17333500 chr21:17327482-17333500:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.48605 0.0164319 0.505766 0.506826 0.361528 0.271233 0.0221675 0.361204 0.66129 0.678748 0.718121 4838 4840 chr21 17376038 17381930 chr21:17376038-17381930:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.469607 0.911569 0.901152 0.945535 0.885314 0.857143 0.0449827 0.841146 0.915438 0.881107 0.935907 0.900862 4839 4841 chr21 21885566 21885568 chr21:21885566-21885568:-:L1HS:NONREF 1 - L1HS KNR euL1db:mrip4533,1KGP:L1_umary_LINE1_2961,Philippe:EXP_ID_0743 MRC5 0.833939 4840 4842 chr21 22253869 22253871 chr21:22253869-22253871:-:L1HS:NONREF 8 - L1HS KNR euL1db:mrip4534,1KGP:L1_umary_LINE1_2962 MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.836118 0.699674 0.834559 0.00621118 0.905556 0.858612 0.759878 0.927481 Beck_2010:15.0 4841 4843 chr21 22493175 22499632 chr21:22493175-22499632:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889807 0.0436893 0.489699 0.434706 0.11831 0.703971 0.0104603 0.964706 0.529711 0.492537 0.543887 0.921053 4842 4844 chr21 25918367 25924392 chr21:25918367-25924392:+:L1PA2:REF 12 + L1PA2 REF full-length APP 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.858603 0.863427 0.973312 0.97631 0.95509 0.975516 0.0584984 0.971362 0.977958 0.953216 0.972073 0.947427 4843 4845 chr21 28676917 28683062 chr21:28676917-28683062:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901679 0.715174 0.962213 0.969811 0.737757 0.610849 0.0110159 0.971429 0.948052 0.967249 0.869693 0.970588 4844 4846 chr21 31814220 31820362 chr21:31814220-31820362:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.802685 0.744337 0.790625 0.748476 0.716198 0.447964 0.0236439 0.925558 0.836576 0.72 0.805097 0.920755 4845 4847 chr21 33925606 33931606 chr21:33925606-33931606:-:L1PA2:REF 12 - L1PA2 REF full-length LINC00649 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0292191 0.978204 0.92339 0.987644 0.299786 0.959108 0.0018018 0.860077 0.981215 0.916928 0.966583 0.474632 4846 4848 chr21 35493766 35499791 chr21:35493766-35499791:-:L1PA2:REF 12 - L1PA2 REF full-length LOC100506403 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.140123 0.882772 0.962215 0.93697 0.897246 0.85875 0.773716 0.937107 0.898839 0.924964 0.961604 0.90755 4847 4849 chr21 36616544 36622673 chr21:36616544-36622673:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.694626 0.188235 0.671521 0.674897 0.661417 0.440789 0.0175695 0.944984 0.784695 0.823204 0.68254 0.748092 4848 4850 chr21 37109076 37115174 chr21:37109076-37115174:+:L1PA4:REF 12 + L1PA4 REF full-length TTC3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.707353 0.968652 0.85624 0.879581 0.811127 0.78655 0.977636 0.743523 0.848896 0.724138 0.898839 0.746753 4849 4851 chr22 11336963 11337451 chr22:11336963-11337451:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883784 0.298627 0.605528 0.604997 0.478528 0.268443 0.0169851 0.383412 0.790761 0.671233 0.718997 0.862155 4850 4852 chr22 11341432 11346064 chr22:11341432-11346064:+:L1P1:REF 1 + L1P1 REF 3prime-truncated MRC5 0.09375 4851 4853 chr22 11428056 11433204 chr22:11428056-11433204:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.626357 0.0647265 0.459763 0.43739 0.0574289 0.366008 0.0123153 0.105683 0.393705 0.432007 0.241379 0.721598 4852 4854 chr22 11959381 11965528 chr22:11959381-11965528:+:L1PA2:REF 12 + L1PA2 REF full-length LOC102723769 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873711 0.557329 0.728999 0.708609 0.376389 0.599374 0.846732 0.202346 0.715292 0.690855 0.524188 0.853608 4853 4855 chr22 12388849 12394988 chr22:12388849-12394988:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.665158 0.148459 0.230769 0.219653 0.256351 0.0647059 0.0143541 0.391111 0.291304 0.165414 0.434483 0.503546 4854 4856 chr22 12801330 12807455 chr22:12801330-12807455:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.52638 0.326034 0.345086 0.485746 0.120358 0.22807 0.0411311 0.23756 0.398527 0.432081 0.285624 0.635971 4855 4857 chr22 15214621 15220667 chr22:15214621-15220667:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.134259 0.602452 0.575949 0.654912 0.483516 0.543046 0.0406504 0.47549 0.832474 0.805195 0.72335 0.86087 4856 4858 chr22 16183718 16189738 chr22:16183718-16189738:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.322835 0.80558 0.627016 0.763063 0.527903 0.668882 0.0238095 0.0188828 0.903558 0.731544 0.783157 0.905691 4857 4859 chr22 16235053 16241190 chr22:16235053-16241190:+:L1PA4:REF 11 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.540616 0.0343461 0.252083 0.301764 0.03367 0.195652 0.031746 0.232984 0.388571 0.0638298 0.487903 4858 4860 chr22 16660386 16666498 chr22:16660386-16666498:+:L1PA4:REF 8 + L1PA4 REF full-length ANKRD62P1-PARP4P3 2102Ep,HepG2,MRC5,K562,HCT116,IMR90,HEK293,H1 0.972222 0.466102 0.604839 0.716981 0.852632 0.458333 0.542169 0.711864 4859 4861 chr22 16766368 16767295 chr22:16766368-16767295:+:L1PA4:REF 8 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,HCT116,HEK293 0.883117 0.165138 0.550562 0.5625 0.170854 0.0780142 0.911111 0.463235 4860 4862 chr22 17296834 17299769 chr22:17296834-17299769:-:L1PA6:REF 1 - L1PA6 REF 3prime-truncated MRC5 0.0 4861 4863 chr22 19223389 19223391 chr22:19223389-19223391:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip4594,1KGP:L1_umary_LINE1_2986,Philippe:EXP_ID_0752 CLTCL1 MRC5 0.960784 4862 4864 chr22 22131969 22131971 chr22:22131969-22131971:-:L1HS:NONREF 6 - L1HS KNR euL1db:mrip4600,Philippe:EXP_ID_0754 2102Ep,BJ,MRC5,K562,MCF7,IMR90 0.132773 0.817757 0.942102 0.365625 0.972637 0.918919 Beck_2010:0.0 4863 4865 chr22 22187854 22193971 chr22:22187854-22193971:+:L1PA5:REF 11 + L1PA5 REF full-length 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.804521 0.570236 0.671089 0.578497 0.19086 0.010241 0.77635 0.827913 0.545045 0.859155 0.807407 4864 4866 chr22 22276800 22282812 chr22:22276800-22282812:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919125 0.979866 0.883123 0.888648 0.884535 0.988577 0.946019 0.982507 0.978294 0.925193 0.954056 0.887546 4865 4867 chr22 22361253 22361257 chr22:22361253-22361257:+:L1HS:NONREF 8 + L1HS KNR euL1db:mrip4601,Philippe:EXP_ID_0755 2102Ep,BJ,MRC5,HEK293T,K562,HCT116,HEK293,H1 0.318792 0.614151 0.621253 0.920476 0.0911281 0.954014 0.951807 0.681661 Dombroski_1991:1 4866 4868 chr22 23662983 23669138 chr22:23662983-23669138:+:L1PA4:REF 7 + L1PA4 REF full-length GUSBP11 HepG2,MRC5,K562,MCF7,HCT116,IMR90,HEK293 0.291339 0.373832 0.170455 0.139241 0.452632 0.448276 0.456522 4867 4869 chr22 28059912 28059914 chr22:28059912-28059914:-:L1HS:NONREF 3 - L1HS KNR euL1db:mrip4611,Philippe:EXP_ID_0757 TTC28 BJ,K562,IMR90 0.854178 0.904791 0.73508 Beck_2010:46.0 4868 4870 chr22 28133242 28134796 chr22:28133242-28134796:+:L1P1:REF 12 + L1P1 REF 3prime-truncated TTC28 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.913295 0.996466 0.972222 0.959831 0.949275 0.988095 0.40367 0.76087 0.324219 0.982456 0.978355 0.979167 4869 4871 chr22 28209186 28215291 chr22:28209186-28215291:+:L1PA5:REF 12 + L1PA5 REF full-length TTC28 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.809756 0.96828 0.972569 0.967607 0.943338 0.977778 0.676568 0.973451 0.61087 0.96 0.970986 0.858065 4870 4872 chr22 28386847 28392869 chr22:28386847-28392869:-:L1PA3:REF 12 - L1PA3 REF full-length TTC28 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.86422 0.962963 0.936893 0.931464 0.948133 0.823944 0.802575 0.928177 0.820408 0.925081 0.951424 0.948087 4871 4873 chr22 28663283 28669315 chr22:28663283-28669315:+:L1HS:REF 12 + L1HS REF full-length TTC28 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0539832 0.0584387 0.952897 0.929831 0.00943026 0.0390356 0.0141593 0.0183086 0.983607 0.956484 0.869484 0.729699 Brouha_2003:13.8 Gardner_2017:2,Helman_2013:3,Philippe_2016:5,Pitkaenen_2014:83,Rodriguez-Martin_2020:794,Tubio_2014:137 4872 4874 chr22 32294665 32300684 chr22:32294665-32300684:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90414 0.658085 0.661953 0.642812 0.782779 0.59432 0.0190678 0.552795 0.935009 0.816265 0.786024 0.816135 4873 4875 chr22 34549683 34555708 chr22:34549683-34555708:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.127877 0.551009 0.785518 0.76649 0.407694 0.528169 0.219965 0.911814 0.770483 0.808661 0.789255 0.928096 4874 4876 chr22 34677368 34683400 chr22:34677368-34683400:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.695364 0.745992 0.694281 0.732516 0.5319 0.508028 0.00544323 0.201149 0.828719 0.703154 0.798892 0.858394 4875 4877 chr22 47349343 47351653 chr22:47349343-47351653:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated LOC339685 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878099 0.231818 0.567108 0.62212 0.0381282 0.239344 0.00657895 0.631373 0.858086 0.680769 0.50289 0.701754 4876 4878 chr22 48985761 48991792 chr22:48985761-48991792:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.208605 0.695595 0.79112 0.821169 0.656809 0.828299 0.651212 0.977089 0.890281 0.829916 0.745508 0.916753 4877 4879 chr22 50755469 50757323 chr22:50755469-50757323:-:L1PA4:REF 11 - L1PA4 REF 3prime-truncated RPL23AP82 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.0424555 0.013624 0.0263323 0.0434183 0.00199283 0.0119904 0.00690608 0.00658514 0.0616016 0.00516674 0.0178042 4878 4880 chrX 5480456 5486466 chrX:5480456-5486466:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0233321 0.606632 0.798231 0.798023 0.597061 0.756775 0.0160305 0.276082 0.822028 0.853441 0.825928 0.921392 4879 4881 chrX 6932481 6933177 chrX:6932481-6933177:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0179558 0.958858 0.939914 0.958398 0.682905 0.729761 0.0409664 0.30643 0.913684 0.860256 0.89383 0.902344 4880 4882 chrX 7587592 7593752 chrX:7587592-7593752:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0678092 0.676072 0.85109 0.825822 0.549491 0.744548 0.0103245 0.722704 0.767561 0.803534 0.744088 0.899598 4881 4883 chrX 10638084 10644167 chrX:10638084-10644167:+:L1PA5:REF 1 + L1PA5 REF full-length MID1 MRC5 0.0384615 4882 4884 chrX 10715059 10721211 chrX:10715059-10721211:+:L1PA4:REF 10 + L1PA4 REF full-length MID1 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.921788 0.772152 0.874608 0.557143 0.0608108 0.0 0.486486 0.951724 0.713043 0.557746 4883 4885 chrX 11022415 11025259 chrX:11022415-11025259:-:L1P3:REF 1 - L1P3 REF 3prime-truncated MRC5 0.482759 4884 4886 chrX 11707248 11713279 chrX:11707248-11713279:+:L1HS:REF 9 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,IMR90,HEK293,H1 0.0432619 0.848571 0.886538 0.958986 0.718557 0.520539 0.836641 0.809827 0.935751 Brouha_2003:2.6 Gardner_2017:4,Rodriguez-Martin_2020:183,Tubio_2014:7 4885 4887 chrX 11935296 11941314 chrX:11935296-11941314:-:L1HS:REF 6 - L1HS REF full-length FRMPD4 HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.664975 0.681507 0.359551 0.863585 0.701149 0.742922 Brouha_2003:132.0 Gardner_2017:1,MacFarlane_2013:2,Philippe_2016:1,Rodriguez-Martin_2020:112,Tubio_2014:20 4886 4888 chrX 12537884 12539638 chrX:12537884-12539638:+:L1PA5:REF 11 + L1PA5 REF 3prime-truncated FRMPD4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.694382 0.0217391 0.472727 0.714286 0.140436 0.0915254 0.0254545 0.0853081 0.32107 0.398198 0.747253 4887 4889 chrX 12837171 12839824 chrX:12837171-12839824:-:L1PA7:REF 5 - L1PA7 REF 3prime-truncated MRC5,HEK293T,HeLaS3,IMR90,HEK293 0.325581 0.0357143 0.125 0.230769 0.282051 4888 4890 chrX 13132317 13138466 chrX:13132317-13138466:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.941236 0.929545 0.860544 0.988331 0.89322 0.970252 0.794271 0.89372 0.876471 0.896341 0.960784 0.908257 4889 4891 chrX 14103920 14109975 chrX:14103920-14109975:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.746591 0.772633 0.868867 0.821583 0.579946 0.548523 0.0177398 0.853167 0.894097 0.799736 0.806379 0.945887 4890 4892 chrX 14457878 14464003 chrX:14457878-14464003:-:L1PA4:REF 1 - L1PA4 REF full-length MRC5 0.191126 4891 4893 chrX 14683910 14688939 chrX:14683910-14688939:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated GLRA2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908587 0.851301 0.82438 0.841158 0.605823 0.371429 0.0104895 0.349882 0.97076 0.676538 0.500708 0.956522 4892 4894 chrX 14809194 14815329 chrX:14809194-14815329:+:L1PA6:REF 11 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.92 0.919593 0.963415 0.973671 0.780593 0.793388 0.027248 0.75 0.979235 0.835391 0.749715 4893 4895 chrX 14969001 14975122 chrX:14969001-14975122:-:L1PA5:REF 10 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.808 0.0556901 0.87013 0.743151 0.267974 0.305019 0.0 0.34717 0.657143 0.458841 4894 4896 chrX 16230649 16236856 chrX:16230649-16236856:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.934284 0.886929 0.930114 0.972383 0.635237 0.502985 0.0723454 0.861829 0.963235 0.874807 0.91204 0.956298 4895 4897 chrX 16321645 16327801 chrX:16321645-16327801:+:L1PA3:REF 2 + L1PA3 REF full-length MRC5,HeLaS3 0.66065 0.495238 4896 4898 chrX 16360076 16366218 chrX:16360076-16366218:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.942085 0.861224 0.905172 0.928571 0.384 0.294118 0.103774 0.861789 0.928 0.907143 0.86 4897 4899 chrX 16497356 16500000 chrX:16497356-16500000:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.912248 0.939194 0.916117 0.979132 0.394438 0.370953 0.0199005 0.679265 0.9791 0.820181 0.874737 0.986413 4898 4900 chrX 17342483 17348512 chrX:17342483-17348512:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0844738 0.858156 0.878637 0.905644 0.232938 0.0130354 0.0139969 0.0765987 0.716495 0.84119 0.768402 4899 4901 chrX 17781376 17787389 chrX:17781376-17787389:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.183539 0.302743 0.886463 0.933282 0.207028 0.534914 0.0266393 0.193989 0.902256 0.717949 0.757337 0.689873 4900 4902 chrX 18104292 18104924 chrX:18104292-18104924:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated LINC01456 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0449534 0.841188 0.873531 0.87963 0.243031 0.834586 0.077187 0.785956 0.896825 0.6731 0.868968 0.262664 4901 4903 chrX 18734131 18740262 chrX:18734131-18740262:-:L1PA5:REF 3 - L1PA5 REF full-length PPEF1 MRC5,K562,MCF7 0.893617 0.05 0.6375 4902 4904 chrX 19142668 19148700 chrX:19142668-19148700:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0615982 0.870236 0.858311 0.858376 0.740566 0.729897 0.134313 0.880259 0.962712 0.690476 0.837825 0.832589 4903 4905 chrX 19273369 19279507 chrX:19273369-19279507:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871591 0.701439 0.66383 0.719917 0.5175 0.490368 0.0159363 0.654229 0.947761 0.709135 0.535059 0.968421 4904 4906 chrX 19940253 19946296 chrX:19940253-19946296:-:L1PA2:REF 12 - L1PA2 REF full-length BCLAF3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0992411 0.973625 0.977252 0.985828 0.870968 0.983454 0.919932 0.936393 0.982173 0.67093 0.879157 0.86506 4905 4907 chrX 20845443 20851624 chrX:20845443-20851624:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856833 0.393443 0.381148 0.430206 0.0270936 0.0717489 0.012 0.0432432 0.0825688 0.372549 0.275926 0.93985 4906 4908 chrX 21339463 21345718 chrX:21339463-21345718:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.917417 0.732692 0.821792 0.834783 0.549091 0.655666 0.0208127 0.494845 0.886331 0.789402 0.784784 0.960684 4907 4909 chrX 21544587 21550754 chrX:21544587-21550754:+:L1PA7:REF 1 + L1PA7 REF full-length CNKSR2 MRC5 0.198758 4908 4910 chrX 22232626 22235300 chrX:22232626-22235300:-:L1PA7:REF 6 - L1PA7 REF 3prime-truncated PHEX 2102Ep,MRC5,HEK293T,HeLaS3,IMR90,HEK293 0.444444 0.113636 0.0833333 0.125 0.1 0.112903 4909 4911 chrX 22676858 22682604 chrX:22676858-22682604:+:L1PA5:REF 1 + L1PA5 REF 3prime-truncated PTCHD1-AS HEK293 0.644068 4910 4912 chrX 23238516 23244575 chrX:23238516-23244575:+:L1HS:REF 12 + L1HS REF full-length PTCHD1-AS 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.941587 0.672515 0.808696 0.81642 0.681011 0.652941 0.00801282 0.814778 0.846447 0.812283 0.737089 0.932401 Brouha_2003:0.0 4911 4913 chrX 23357661 23363791 chrX:23357661-23363791:-:L1PA6:REF 12 - L1PA6 REF full-length PTCHD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.92948 0.393414 0.665782 0.604427 0.534121 0.285448 0.00230947 0.66506 0.392713 0.65109 0.647993 0.949153 4912 4914 chrX 23458349 23459578 chrX:23458349-23459578:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.971024 0.60076 0.791195 0.773036 0.586926 0.571588 0.0306258 0.870677 0.815336 0.784387 0.8289 0.944251 4913 4915 chrX 23645908 23651833 chrX:23645908-23651833:-:L1PA5:REF 11 - L1PA5 REF full-length 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.957396 0.868852 0.922272 0.687585 0.734127 0.0584615 0.766332 0.950139 0.612903 0.822799 0.9375 4914 4916 chrX 25117140 25123161 chrX:25117140-25123161:-:L1PA6:REF 1 - L1PA6 REF full-length MRC5 0.0932203 4915 4917 chrX 25315246 25316001 chrX:25315246-25316001:-:L1PA4:REF 9 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.683128 0.567901 0.655462 0.338462 0.281768 0.10989 0.427536 0.540816 0.694836 4916 4918 chrX 25404200 25404749 chrX:25404200-25404749:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.925346 0.419643 0.782506 0.739464 0.484407 0.281938 0.00564972 0.65641 0.946708 0.731006 0.716891 0.96875 4917 4919 chrX 25771296 25772426 chrX:25771296-25772426:-:L1P1:REF 10 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908387 0.282714 0.791962 0.642718 0.0107239 0.777487 0.973958 0.753695 0.705744 0.960265 4918 4920 chrX 26314417 26320446 chrX:26314417-26320446:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.131671 0.732353 0.816594 0.82389 0.693557 0.732701 0.0226586 0.762385 0.971259 0.708122 0.719512 0.941399 4919 4921 chrX 26334008 26340104 chrX:26334008-26340104:+:L1PA6:REF 6 + L1PA6 REF full-length HepG2,MRC5,HEK293T,HeLaS3,IMR90,HEK293 0.0571429 0.658824 0.628571 0.114286 0.7 0.334677 4920 4922 chrX 27196690 27198202 chrX:27196690-27198202:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.921337 0.148214 0.477583 0.518785 0.340319 0.0916497 0.0104167 0.174359 0.970183 0.444685 0.275286 0.742857 4921 4923 chrX 27758585 27764733 chrX:27758585-27764733:+:L1PA5:REF 11 + L1PA5 REF full-length DCAF8L2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.870175 0.0466926 0.421569 0.676349 0.247458 0.194313 0.0421687 0.963731 0.571429 0.35782 0.655556 4922 4924 chrX 27801040 27801409 chrX:27801040-27801409:+:L1P1:REF 12 + L1P1 REF 3prime-truncated MAGEB10 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895528 0.598209 0.756112 0.935189 0.596999 0.506447 0.0133648 0.66121 0.987627 0.812197 0.728232 0.882622 4923 4925 chrX 28206791 28212789 chrX:28206791-28212789:+:L1PA2:REF 10 + L1PA2 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.0511296 0.0225653 0.15138 0.0423143 0.658931 0.0151154 0.977912 0.411672 0.375306 0.0545746 4924 4926 chrX 28362090 28368221 chrX:28362090-28368221:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929858 0.634179 0.667266 0.929874 0.307385 0.518707 0.0121951 0.660221 0.97956 0.78534 0.693642 0.954683 4925 4927 chrX 29981730 29987885 chrX:29981730-29987885:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901504 0.623543 0.798271 0.950447 0.629412 0.665131 0.0225806 0.782609 0.890741 0.676056 0.681218 0.926829 4926 4928 chrX 31077316 31083463 chrX:31077316-31083463:-:L1PA4:REF 12 - L1PA4 REF full-length FTHL17 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887726 0.861801 0.809013 0.80655 0.711828 0.774194 0.0176471 0.659314 0.821942 0.804 0.679549 0.952128 4927 4929 chrX 32730898 32736929 chrX:32730898-32736929:+:L1PA3:REF 12 + L1PA3 REF full-length DMD 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.940108 0.78918 0.784958 0.852758 0.602345 0.718169 0.0192719 0.521216 0.846917 0.841429 0.727687 0.960573 4928 4930 chrX 33407552 33407554 chrX:33407552-33407554:+:L1HS:NONREF 1 + L1HS KNR euL1db:mrip4668,Philippe:EXP_ID_1544 2102Ep 0.436765 Beck_2010:133.0 4929 4931 chrX 34249185 34253913 chrX:34249185-34253913:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.249239 0.858642 0.764356 0.826603 0.518145 0.752087 0.0274223 0.727533 0.884914 0.722472 0.636332 0.938988 4930 4932 chrX 34457626 34458682 chrX:34457626-34458682:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873234 0.457341 0.747387 0.785372 0.51796 0.815957 0.0244716 0.557026 0.817998 0.801724 0.762347 0.941922 4931 4933 chrX 36170297 36176324 chrX:36170297-36176324:-:L1PA3:REF 8 - L1PA3 REF full-length CFAP47 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.921296 0.518248 0.612308 0.136719 0.853211 0.209302 0.664062 0.590909 4932 4934 chrX 36415143 36419001 chrX:36415143-36419001:-:L1PA6:REF 12 - L1PA6 REF full-length LOC101928627 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.83174 0.0139373 0.363985 0.448405 0.174779 0.59751 0.0185185 0.395683 0.26616 0.378109 0.432133 0.946237 4933 4935 chrX 36465194 36471217 chrX:36465194-36471217:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.142857 0.702312 0.686076 0.779867 0.458537 0.841313 0.00805153 0.718799 0.833132 0.710817 0.567641 0.964912 4934 4936 chrX 37525405 37530915 chrX:37525405-37530915:-:L1P3:REF 9 - L1P3 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.861702 0.0263158 0.375 0.48 0.361111 0.0 0.916667 0.318182 0.389706 4935 4937 chrX 37560508 37560949 chrX:37560508-37560949:+:L1P1:REF 10 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.929701 0.309353 0.488235 0.732353 0.62963 0.555556 0.488889 0.96875 0.689189 0.634545 4936 4938 chrX 37628446 37634592 chrX:37628446-37634592:-:L1PA3:REF 12 - L1PA3 REF full-length LANCL3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919658 0.854049 0.782288 0.844294 0.819073 0.852908 0.664634 0.843478 0.974186 0.9024 0.85137 0.977273 4937 4939 chrX 39279068 39281167 chrX:39279068-39281167:-:L1PA7:REF 7 - L1PA7 REF 3prime-truncated 2102Ep,MRC5,HEK293T,HeLaS3,MCF7,IMR90,HEK293 0.823529 0.295455 0.0238095 0.0 0.5 0.48 0.236111 4938 4940 chrX 39541863 39543836 chrX:39541863-39543836:+:L1PA6:REF 2 + L1PA6 REF 3prime-truncated MRC5,HEK293 0.491453 0.666667 4939 4941 chrX 42004299 42010329 chrX:42004299-42010329:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905405 0.644108 0.858138 0.793069 0.682547 0.407442 0.0243446 0.914894 0.974464 0.822286 0.8236 0.953074 4940 4942 chrX 42202163 42208183 chrX:42202163-42208183:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.112632 0.879966 0.870588 0.894231 0.599881 0.78225 0.00785083 0.940816 0.983069 0.791225 0.797392 0.924211 4941 4943 chrX 42424860 42430890 chrX:42424860-42430890:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.387116 0.922771 0.852973 0.799226 0.653245 0.516832 0.0204248 0.8 0.978564 0.736577 0.780556 0.894253 4942 4944 chrX 42589683 42595809 chrX:42589683-42595809:+:L1PA3:REF 7 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HEK293 0.926923 0.632479 0.798387 0.76 0.590278 0.7 0.799065 4943 4945 chrX 42650741 42656856 chrX:42650741-42656856:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.848344 0.740374 0.774497 0.800676 0.513613 0.698939 0.0153417 0.874826 0.975806 0.806897 0.81929 0.940054 4944 4946 chrX 42810743 42816960 chrX:42810743-42816960:-:L1PA6:REF 11 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.846154 0.48169 0.625 0.566202 0.272727 0.233184 0.0102041 0.783505 0.970149 0.682274 0.512671 4945 4947 chrX 42888370 42894396 chrX:42888370-42894396:+:L1PA2:REF 10 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293,H1 0.196676 0.83557 0.878049 0.855592 0.405333 0.826506 0.987692 0.459559 0.728438 0.97411 4946 4948 chrX 43670449 43676596 chrX:43670449-43676596:-:L1PA3:REF 12 - L1PA3 REF full-length MAOA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.879941 0.831304 0.727062 0.776038 0.695431 0.798749 0.0449321 0.843493 0.845336 0.756587 0.72232 0.850254 4947 4949 chrX 43721689 43727948 chrX:43721689-43727948:-:L1PA7:REF 1 - L1PA7 REF full-length MAOA MRC5 0.213483 4948 4950 chrX 43840491 43841034 chrX:43840491-43841034:+:L1P3:REF 12 + L1P3 REF 3prime-truncated MAOB 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.834928 0.839216 0.535885 0.460417 0.373206 0.652542 0.0 0.400862 0.91358 0.417671 0.574837 0.848837 4949 4951 chrX 46000000 46004481 chrX:46000000-46004481:-:L1P2:REF 12 - L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.904478 0.629956 0.791139 0.856757 0.506383 0.611111 0.008 0.684783 0.977273 0.697479 0.747801 0.960784 4950 4952 chrX 46054884 46058449 chrX:46054884-46058449:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885714 0.328829 0.304965 0.364706 0.0397112 0.158974 0.0208333 0.55 0.980392 0.355263 0.17192 0.980392 4951 4953 chrX 46074554 46080736 chrX:46074554-46080736:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.898973 0.224 0.363636 0.333333 0.0474041 0.144033 0.00440529 0.430605 0.922727 0.281955 0.236923 0.903061 4952 4954 chrX 46484679 46486516 chrX:46484679-46486516:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.790323 0.923077 0.926829 0.956522 0.55036 0.974359 0.183333 0.763889 0.946667 0.6875 0.524079 0.961538 4953 4955 chrX 46655357 46661385 chrX:46655357-46661385:+:L1PA3:REF 12 + L1PA3 REF full-length SLC9A7 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.879552 0.969916 0.983402 0.980937 0.913078 0.943201 0.328704 0.957447 0.986979 0.924866 0.927378 0.977901 4954 4956 chrX 47781815 47783673 chrX:47781815-47783673:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.877635 0.526786 0.742878 0.773565 0.408144 0.472711 0.285156 0.118364 0.956522 0.734671 0.419538 0.907895 4955 4957 chrX 47783671 47789697 chrX:47783671-47789697:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.544038 0.837047 0.863911 0.91411 0.850962 0.789749 0.613349 0.941476 0.978782 0.825633 0.8205 0.924829 4956 4958 chrX 48433480 48438697 chrX:48433480-48438697:+:L1PA5:REF 9 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293 0.4 0.0394737 0.882051 0.607143 0.587629 0.350649 0.542857 0.824176 0.638614 4957 4959 chrX 49620062 49626205 chrX:49620062-49626205:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.852362 0.728395 0.700483 0.802998 0.518595 0.206422 0.0458333 0.63 0.70122 0.772727 0.652685 0.925 4958 4960 chrX 50019456 50025505 chrX:50019456-50025505:-:L1HS:REF 12 - L1HS REF full-length CLCN5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0264295 0.957929 0.935038 0.969417 0.239161 0.963636 0.509995 0.924107 0.979785 0.690214 0.808341 0.873214 4959 4961 chrX 50060143 50066175 chrX:50060143-50066175:+:L1PA2:REF 12 + L1PA2 REF full-length CLCN5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.359657 0.97546 0.963399 0.970538 0.8809 0.967359 0.550113 0.907534 0.976357 0.737613 0.737421 0.894172 4960 4962 chrX 50296102 50302279 chrX:50296102-50302279:-:L1PA4:REF 12 - L1PA4 REF full-length CCNB3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911765 0.473958 0.427215 0.605431 0.499044 0.0590278 0.0352564 0.675182 0.900332 0.676329 0.642961 0.861789 4961 4963 chrX 51018802 51021520 chrX:51018802-51021520:-:L1PA7:REF 7 - L1PA7 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,IMR90,HEK293 0.0 0.2 0.194444 0.0 0.25 0.363636 0.294118 4962 4964 chrX 51124934 51127864 chrX:51124934-51127864:+:L1P3:REF 10 + L1P3 REF 3prime-truncated LINC01284 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.852941 0.171875 0.37963 0.275 0.128571 0.0 0.517857 0.410714 0.6625 0.345361 4963 4965 chrX 51262091 51268161 chrX:51262091-51268161:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.785469 0.732394 0.726908 0.734906 0.629606 0.681178 0.0255474 0.456442 0.882014 0.705279 0.571775 0.841398 4964 4966 chrX 51427448 51433599 chrX:51427448-51433599:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.953466 0.744811 0.832049 0.80575 0.838329 0.641221 0.0258152 0.829569 0.926009 0.738318 0.805593 0.838384 4965 4967 chrX 51512321 51518344 chrX:51512321-51518344:-:L1PA3:REF 12 - L1PA3 REF full-length LINC01496 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.886364 0.523677 0.876744 0.893572 0.819263 0.808219 0.151568 0.87931 0.963303 0.889688 0.84242 0.955307 4966 4968 chrX 51531585 51537594 chrX:51531585-51537594:-:L1PA3:REF 9 - L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.841945 0.739726 0.853333 0.722628 0.683099 0.877551 0.912844 0.836601 0.666031 4967 4969 chrX 51623141 51629261 chrX:51623141-51629261:+:L1PA5:REF 12 + L1PA5 REF full-length CENPVL3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889474 0.0218978 0.593023 0.671171 0.135802 0.0181818 0.0 0.078125 0.555556 0.547619 0.430328 0.925926 4968 4970 chrX 51644758 51650770 chrX:51644758-51650770:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.92432 0.831646 0.855974 0.870331 0.722635 0.592063 0.0725034 0.675978 0.980843 0.811881 0.768005 0.954704 4969 4971 chrX 51991320 51997421 chrX:51991320-51997421:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880859 0.65534 0.780357 0.815637 0.578224 0.547059 0.00239234 0.863636 0.817505 0.789157 0.72227 0.966825 4970 4972 chrX 52111122 52117265 chrX:52111122-52117265:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.840336 0.281457 0.458904 0.503745 0.129442 0.09319 0.0077821 0.488636 0.190871 0.485849 0.228417 0.770492 4971 4973 chrX 52145326 52151280 chrX:52145326-52151280:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.885522 0.927778 0.712329 0.846667 0.542308 0.168831 0.0 0.778689 0.581818 0.758621 0.772727 0.982759 4972 4974 chrX 52222105 52228125 chrX:52222105-52228125:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.347328 0.884615 0.846154 0.878145 0.758144 0.740809 0.0714286 0.665909 0.919173 0.811741 0.87141 0.914163 4973 4975 chrX 52291785 52297932 chrX:52291785-52297932:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.828431 0.753715 0.51626 0.535329 0.269565 0.150362 0.00464037 0.477733 0.416092 0.54185 0.315881 0.857471 4974 4976 chrX 52550771 52553226 chrX:52550771-52553226:+:L1P2:REF 12 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.910394 0.505319 0.796296 0.472325 0.349794 0.215613 0.00316456 0.120482 0.56 0.640167 0.675 0.951807 4975 4977 chrX 54052897 54053244 chrX:54052897-54053244:-:L1P1:REF 12 - L1P1 REF 3prime-truncated PHF8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911051 0.931559 0.967807 0.956826 0.623958 0.939623 0.35219 0.93254 0.975395 0.794715 0.797763 0.927083 4976 4978 chrX 54118685 54124744 chrX:54118685-54124744:-:L1HS:REF 11 - L1HS REF full-length FAM120C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.378457 0.920319 0.75817 0.903409 0.746082 0.898515 0.541436 0.832 0.923664 0.806084 0.759309 4977 4979 chrX 54142115 54143166 chrX:54142115-54143166:+:L1PA5:REF 5 + L1PA5 REF 3prime-truncated FAM120C 2102Ep,HEK293T,K562,IMR90,HEK293 0.653465 0.730769 0.0731707 0.820513 0.701863 4978 4980 chrX 54697499 54702045 chrX:54697499-54702045:+:L1P1:REF 1 + L1P1 REF 3prime-truncated 2102Ep 0.875 4979 4981 chrX 54765705 54770404 chrX:54765705-54770404:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated ITIH6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.076714 0.943941 0.856237 0.91133 0.213074 0.889398 0.377686 0.966712 0.97108 0.780209 0.867668 0.90339 4980 4982 chrX 54853945 54860101 chrX:54853945-54860101:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.864865 0.175393 0.666667 0.543307 0.237705 0.0860927 0.00381679 0.642623 0.72766 0.619403 0.410256 0.822222 4981 4983 chrX 54878587 54883219 chrX:54878587-54883219:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.855711 0.843478 0.642361 0.670034 0.52381 0.609907 0.0195122 0.590909 0.958549 0.552764 0.478336 0.847826 4982 4984 chrX 55297654 55303790 chrX:55297654-55303790:-:L1PA5:REF 12 - L1PA5 REF full-length LOC100421746 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.853859 0.0255754 0.567568 0.56686 0.0635965 0.0285714 0.015748 0.416031 0.746032 0.509677 0.387816 0.759036 4983 4985 chrX 55343685 55345200 chrX:55343685-55345200:+:L1PA4:REF 11 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.861111 0.439024 0.79661 0.641379 0.242574 0.368421 0.0784314 0.867925 0.638462 0.247596 0.8 4984 4986 chrX 55396514 55402659 chrX:55396514-55402659:+:L1PA5:REF 10 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.873096 0.37037 0.619048 0.614815 0.363158 0.468085 0.486111 0.811688 0.561798 0.547009 4985 4987 chrX 55426516 55432678 chrX:55426516-55432678:+:L1PA4:REF 3 + L1PA4 REF full-length HepG2,MRC5,HCT116 0.15 0.386364 0.488372 4986 4988 chrX 55768921 55775044 chrX:55768921-55775044:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.788945 0.88587 0.95438 0.937688 0.594049 0.983015 0.379668 0.626087 0.976959 0.621818 0.431818 0.909574 4987 4989 chrX 55845760 55851917 chrX:55845760-55851917:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.85 0.625 0.583333 0.591241 0.0625 0.190476 0.0 0.855072 1.0 0.460317 0.271605 0.642857 4988 4990 chrX 55936391 55942528 chrX:55936391-55942528:+:L1PA4:REF 12 + L1PA4 REF full-length KLF8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.861689 0.518644 0.856757 0.801792 0.172945 0.308081 0.0113314 0.714646 0.988858 0.697872 0.667426 0.860656 4989 4991 chrX 56047265 56053280 chrX:56047265-56053280:-:L1PA4:REF 11 - L1PA4 REF full-length KLF8 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.369989 0.723183 0.905775 0.883562 0.403266 0.0200803 0.0200573 0.957447 0.718605 0.847328 0.870588 4990 4992 chrX 56157403 56162912 chrX:56157403-56162912:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated KLF8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.884729 0.0422794 0.666667 0.658254 0.102041 0.160256 0.00395257 0.840173 0.857708 0.590778 0.285464 0.725564 4991 4993 chrX 56324965 56331139 chrX:56324965-56331139:-:L1PA3:REF 3 - L1PA3 REF full-length MRC5,HEK293T,HEK293 0.714286 0.280374 0.343137 4992 4994 chrX 56352616 56358769 chrX:56352616-56358769:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.834711 0.00625 0.232877 0.44375 0.00943396 0.0294118 0.0104167 0.392857 0.850746 0.410714 0.084507 0.788462 4993 4995 chrX 56419862 56421784 chrX:56419862-56421784:-:L1P1:REF 3 - L1P1 REF 3prime-truncated 2102Ep,HEK293T,HEK293 0.590909 0.0147059 0.1 4994 4996 chrX 56424059 56430208 chrX:56424059-56430208:-:L1PA6:REF 11 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.785156 0.467456 0.32 0.309735 0.243363 0.00769231 0.7 0.75 0.349057 0.178125 0.571429 4995 4997 chrX 56452108 56452609 chrX:56452108-56452609:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.858218 0.274368 0.601367 0.719184 0.284024 0.397338 0.0291439 0.842105 0.925926 0.604972 0.42571 0.827907 4996 4998 chrX 56489529 56495584 chrX:56489529-56495584:-:L1PA6:REF 1 - L1PA6 REF full-length HEK293 0.151515 4997 4999 chrX 56581519 56587672 chrX:56581519-56587672:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.78585 0.981723 0.86071 0.855182 0.768953 0.847893 0.460245 0.880272 0.994526 0.846698 0.802162 0.858612 4998 5000 chrX 56595386 56598136 chrX:56595386-56598136:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated MRC5 0.198225 4999 5001 chrX 56695884 56701916 chrX:56695884-56701916:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0819099 0.908894 0.818717 0.822222 0.6903 0.717492 0.0255987 0.93637 0.977339 0.690065 0.752647 0.890231 5000 5002 chrX 56831130 56833137 chrX:56831130-56833137:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.811321 0.0322581 0.588235 0.614286 0.275862 0.0 0.0 0.6 0.913043 0.416667 0.333333 0.818182 5001 5003 chrX 56839829 56842321 chrX:56839829-56842321:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.80625 0.51341 0.674699 0.71916 0.181818 0.219731 0.0194175 0.798851 0.935 0.50641 0.352403 0.875 5002 5004 chrX 56893931 56900071 chrX:56893931-56900071:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.83612 0.027027 0.375758 0.432692 0.0215054 0.013986 0.0102041 0.51145 0.905109 0.421569 0.122257 0.637931 5003 5005 chrX 56915290 56921294 chrX:56915290-56921294:-:L1PA6:REF 10 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90 0.867925 0.415385 0.36 0.546667 0.0983607 0.1 0.0333333 0.740741 0.952 0.366667 5004 5006 chrX 57048916 57052126 chrX:57048916-57052126:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.893878 0.845528 0.582609 0.711982 0.0408163 0.501832 0.0315789 0.811518 0.955357 0.542714 0.756917 0.849673 5005 5007 chrX 57087583 57091137 chrX:57087583-57091137:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.879412 0.964602 0.974522 0.973684 0.696552 0.95679 0.54491 0.837037 0.954315 0.78626 0.42602 0.956522 5006 5008 chrX 57157849 57163886 chrX:57157849-57163886:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.62047 0.972344 0.944779 0.971133 0.707064 0.961672 0.365854 0.682068 0.978437 0.719551 0.722562 0.854237 5007 5009 chrX 57270540 57275268 chrX:57270540-57275268:+:L1P2:REF 9 + L1P2 REF 3prime-truncated HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.272727 0.5 0.77095 0.155689 0.807018 0.0153846 0.903614 0.657407 0.528875 5008 5010 chrX 57467124 57472422 chrX:57467124-57472422:+:L1P1:REF 12 + L1P1 REF 3prime-truncated FAAH2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.903646 0.492997 0.445652 0.483592 0.433649 0.626335 0.00416667 0.92029 0.954545 0.430556 0.417254 0.8 5009 5011 chrX 57564936 57567078 chrX:57564936-57567078:+:L1PA5:REF 11 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.885087 0.552925 0.655502 0.734731 0.481004 0.366705 0.0166389 0.881215 0.876672 0.698089 0.858748 5010 5012 chrX 57629388 57635409 chrX:57629388-57635409:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.940533 0.937923 0.916076 0.917781 0.636572 0.839704 0.0701262 0.916094 0.934549 0.868421 0.790176 0.875776 5011 5013 chrX 57708529 57714653 chrX:57708529-57714653:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.914146 0.295661 0.62037 0.674645 0.228361 0.571429 0.00996678 0.671454 0.841105 0.708812 0.495658 0.829181 5012 5014 chrX 57744004 57750263 chrX:57744004-57750263:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.656977 0.0105263 0.0261438 0.00608519 0.00922509 0.0430108 0.00769231 0.332248 0.326733 0.0152672 0.0111421 0.109649 5013 5015 chrX 58002418 58002819 chrX:58002418-58002819:+:L1P3:REF 12 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.581818 0.00719424 0.0776699 0.188272 0.0153374 0.035503 0.0229885 0.380952 0.348387 0.157895 0.0394322 0.473684 5014 5016 chrX 63089662 63092204 chrX:63089662-63092204:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.777311 0.015015 0.0916905 0.130435 0.00537634 0.0334572 0.0128755 0.212355 0.626712 0.147826 0.0825036 0.489691 5015 5017 chrX 63330725 63333532 chrX:63330725-63333532:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.9152 0.927224 0.872437 0.919003 0.568038 0.0604839 0.406877 0.634615 0.835714 0.746575 0.505102 0.913793 5016 5018 chrX 63492091 63498252 chrX:63492091-63498252:+:L1PA5:REF 11 + L1PA5 REF full-length LINC01278 HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.978405 0.965224 0.968902 0.539081 0.969697 0.387884 0.817345 0.98189 0.730916 0.585422 0.956814 5017 5019 chrX 63519156 63525277 chrX:63519156-63525277:+:L1PA4:REF 12 + L1PA4 REF full-length LINC01278 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.830365 0.947109 0.972087 0.959524 0.57751 0.986811 0.405637 0.084 0.958438 0.856383 0.667306 0.93858 5018 5020 chrX 63597195 63603223 chrX:63597195-63603223:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.836634 0.717599 0.76 0.744712 0.408511 0.317227 0.0195382 0.809917 0.957359 0.729055 0.517217 0.905455 5019 5021 chrX 63607023 63610318 chrX:63607023-63610318:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.896104 0.0322581 0.496063 0.558052 0.163462 0.0566038 0.00862069 0.771084 0.93578 0.333333 0.244898 0.892857 5020 5022 chrX 63901281 63904828 chrX:63901281-63904828:-:L1P1:REF 12 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.638393 0.0238095 0.297872 0.113924 0.00473934 0.033557 0.0138889 0.403226 0.702381 0.0869565 0.031348 0.714286 5021 5023 chrX 64013267 64019286 chrX:64013267-64019286:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.281317 0.86087 0.836198 0.868549 0.624802 0.61194 0.0456942 0.441242 0.968889 0.805732 0.684791 0.922006 Brouha_2003:0.0 5022 5024 chrX 64078863 64084994 chrX:64078863-64084994:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.827957 0.0438596 0.604545 0.57377 0.095679 0.0769231 0.0113636 0.357143 0.567961 0.52459 0.203091 0.8125 5023 5025 chrX 64131878 64137907 chrX:64131878-64137907:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.911302 0.800712 0.856651 0.87451 0.52159 0.583673 0.0141129 0.515375 0.958796 0.784053 0.708333 0.961538 5024 5026 chrX 64252345 64258375 chrX:64252345-64258375:-:L1PA3:REF 12 - L1PA3 REF full-length MTMR8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.396648 0.808711 0.88287 0.875484 0.77531 0.826056 0.584165 0.881835 0.973445 0.833039 0.65785 0.939956 5025 5027 chrX 64282840 64289023 chrX:64282840-64289023:+:L1PA5:REF 12 + L1PA5 REF full-length MTMR8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863061 0.4375 0.60355 0.623751 0.563107 0.428969 0.41688 0.402564 0.966942 0.669136 0.588235 0.885185 5026 5028 chrX 64296582 64302591 chrX:64296582-64302591:-:L1PA2:REF 12 - L1PA2 REF full-length MTMR8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0985145 0.835512 0.832138 0.825877 0.81791 0.764781 0.554913 0.338122 0.973422 0.802583 0.779125 0.947883 5027 5029 chrX 64363616 64369772 chrX:64363616-64369772:+:L1PA6:REF 1 + L1PA6 REF full-length MTMR8 MRC5 0.76 5028 5030 chrX 64543816 64549933 chrX:64543816-64549933:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.283557 0.414062 0.472464 0.316406 0.10219 0.0553633 0.00920245 0.027439 0.89644 0.474359 0.477907 0.755102 5029 5031 chrX 64774624 64776018 chrX:64774624-64776018:+:L1P2:REF 5 + L1P2 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HEK293 0.933333 0.0 0.0689655 0.0 0.0 5030 5032 chrX 64878690 64884685 chrX:64878690-64884685:+:L1PA5:REF 1 + L1PA5 REF full-length HEK293 0.45098 5031 5033 chrX 64934544 64940025 chrX:64934544-64940025:+:L1P2:REF 3 + L1P2 REF 3prime-truncated ZC4H2 HeLaS3,IMR90,HEK293 0.0 0.285714 0.139241 5032 5034 chrX 65053110 65059224 chrX:65053110-65059224:-:L1PA4:REF 11 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.92328 0.97807 0.859551 0.649351 0.740351 0.542373 0.111111 0.546012 0.987013 0.7 0.703463 5033 5035 chrX 65098452 65100411 chrX:65098452-65100411:+:L1PA8:REF 12 + L1PA8 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.85034 0.97076 0.51634 0.304348 0.471186 0.114865 0.151724 0.204918 0.95 0.397516 0.277929 0.829545 5034 5036 chrX 65166045 65172157 chrX:65166045-65172157:-:L1PA5:REF 8 - L1PA5 REF full-length 2102Ep,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.579545 0.534615 0.175732 0.0909091 0.0128205 0.0555556 0.470588 0.501742 5035 5037 chrX 65378591 65384520 chrX:65378591-65384520:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.832877 0.0752137 0.736769 0.527224 0.615888 0.208333 0.0203327 0.0933099 0.965174 0.573705 0.571921 0.892665 5036 5038 chrX 65567862 65569778 chrX:65567862-65569778:-:L1PA7:REF 7 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HCT116,IMR90,HEK293 0.609375 0.05 0.34375 0.125 0.964286 0.442308 0.267857 5037 5039 chrX 65614680 65620735 chrX:65614680-65620735:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0758082 0.88619 0.960853 0.973515 0.616598 0.938776 0.829883 0.922009 0.980291 0.864721 0.850177 0.817811 5038 5040 chrX 65891387 65894816 chrX:65891387-65894816:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.875698 0.509804 0.62963 0.586313 0.32363 0.0800971 0.808 0.330769 0.929907 0.585242 0.56993 0.952703 5039 5041 chrX 66102293 66108442 chrX:66102293-66108442:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.840909 0.0 0.439394 0.121019 0.025641 0.0151515 0.868421 0.526316 0.871429 0.384615 0.0198675 0.653846 5040 5042 chrX 66180696 66186728 chrX:66180696-66186728:-:L1HS:REF 9 - L1HS REF full-length HEPH 2102Ep,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.759804 0.859649 0.482428 0.774648 0.741007 0.976048 0.911565 0.686813 0.956204 5041 5043 chrX 66686993 66693129 chrX:66686993-66693129:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871173 0.0517711 0.739563 0.68791 0.332207 0.333895 0.0221169 0.383747 0.963462 0.661914 0.385475 0.85 5042 5044 chrX 66718300 66724758 chrX:66718300-66724758:+:L1PA8:REF 1 + L1PA8 REF full-length MRC5 0.037037 5043 5045 chrX 66924856 66930874 chrX:66924856-66930874:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.385417 0.794574 0.744813 0.842402 0.674312 0.614925 0.0 0.907317 0.95549 0.67374 0.551657 0.85034 5044 5046 chrX 66942792 66948817 chrX:66942792-66948817:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.199662 0.484656 0.57006 0.475547 0.267642 0.394575 0.0150463 0.0672783 0.934752 0.503628 0.428874 0.840816 5045 5047 chrX 67026177 67032317 chrX:67026177-67032317:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.77533 0.0480349 0.173684 0.115169 0.0143369 0.0526316 0.0113636 0.595041 0.542169 0.205479 0.0637119 0.7875 5046 5048 chrX 67060006 67066134 chrX:67060006-67066134:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.868132 0.695021 0.621247 0.629986 0.037831 0.11036 0.0154639 0.19598 0.913043 0.721805 0.353814 0.875 5047 5049 chrX 67326767 67327131 chrX:67326767-67327131:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.835443 0.114973 0.375566 0.335128 0.0301109 0.111111 0.011194 0.298295 0.632812 0.304795 0.140371 0.810651 5048 5050 chrX 67357449 67360599 chrX:67357449-67360599:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906667 0.875 0.906977 0.786667 0.376147 0.289474 0.030303 0.840909 0.948276 0.77551 0.452703 0.95 5049 5051 chrX 67424052 67427821 chrX:67424052-67427821:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.843496 0.00993377 0.217391 0.141176 0.0293255 0.0163934 0.0179211 0.831579 0.656357 0.0956522 0.0133869 0.767857 5050 5052 chrX 67488333 67494506 chrX:67488333-67494506:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.838074 0.395514 0.713202 0.397301 0.0485269 0.0546985 0.00270636 0.765574 0.897959 0.605428 0.531107 0.850932 5051 5053 chrX 67626635 67632661 chrX:67626635-67632661:-:L1PA3:REF 12 - L1PA3 REF full-length AR 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.907956 0.727273 0.976089 0.791197 0.543353 0.670175 0.00773694 0.8356 0.97786 0.71012 0.652897 0.957746 5052 5054 chrX 67883964 67890092 chrX:67883964-67890092:-:L1PA5:REF 1 - L1PA5 REF full-length MRC5 0.0 5053 5055 chrX 68216915 68222939 chrX:68216915-68222939:+:L1PA2:REF 12 + L1PA2 REF full-length OPHN1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.127146 0.946023 0.939516 0.973515 0.958055 0.964238 0.66955 0.95756 0.947368 0.898305 0.900756 0.966797 5054 5056 chrX 68264543 68270753 chrX:68264543-68270753:+:L1PA5:REF 12 + L1PA5 REF full-length OPHN1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.662813 0.583541 0.936963 0.824964 0.769706 0.946927 0.318681 0.672535 0.964539 0.782313 0.558363 0.940789 5055 5057 chrX 68736250 68742398 chrX:68736250-68742398:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.795434 0.0369775 0.816498 0.84248 0.753076 0.521898 0.131542 0.865672 0.914035 0.687179 0.745571 0.904884 5056 5058 chrX 69245610 69247598 chrX:69245610-69247598:+:L1PA7:REF 12 + L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.930796 0.0178571 0.595588 0.393678 0.616883 0.0558659 0.0123457 0.681818 0.710227 0.651899 0.727941 0.918605 5057 5059 chrX 69350757 69356897 chrX:69350757-69356897:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.858407 0.691473 0.566372 0.577218 0.282051 0.164502 0.0298507 0.697051 0.860759 0.624088 0.404762 0.916667 5058 5060 chrX 69448371 69454392 chrX:69448371-69454392:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.725248 0.429412 0.459649 0.482645 0.340164 0.13253 0.0275591 0.517544 0.811245 0.513514 0.620472 0.9125 5059 5061 chrX 69676829 69682848 chrX:69676829-69682848:-:L1PA3:REF 3 - L1PA3 REF full-length EDA MRC5,HEK293T,HEK293 0.666667 0.607407 0.69697 5060 5062 chrX 69783286 69789318 chrX:69783286-69789318:-:L1PA3:REF 12 - L1PA3 REF full-length EDA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.23501 0.680723 0.713961 0.470255 0.555016 0.452888 0.01854 0.326797 0.970833 0.701128 0.670015 0.947867 5061 5063 chrX 69822696 69828728 chrX:69822696-69828728:-:L1PA3:REF 12 - L1PA3 REF full-length EDA 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.802833 0.983363 0.687217 0.707426 0.798777 0.762535 0.181043 0.924352 0.983158 0.923372 0.822383 0.958333 5062 5064 chrX 70660890 70662695 chrX:70660890-70662695:+:L1P1:REF 2 + L1P1 REF 3prime-truncated TEX11 HEK293T,HEK293 0.317073 0.554217 5063 5065 chrX 70710795 70716928 chrX:70710795-70716928:-:L1PA4:REF 6 - L1PA4 REF full-length TEX11 HepG2,MRC5,HEK293T,HCT116,IMR90,HEK293 0.276316 0.339806 0.230769 0.432836 0.391753 0.492958 5064 5066 chrX 70937958 70944111 chrX:70937958-70944111:-:L1PA3:REF 12 - L1PA3 REF full-length SLC7A3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.750251 0.791667 0.820663 0.770695 0.597656 0.561508 0.0753138 0.708333 0.959184 0.667464 0.685078 0.779221 5065 5067 chrX 71837932 71844064 chrX:71837932-71844064:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.701195 0.0352113 0.255172 0.318386 0.0324675 0.0909091 0.0 0.579439 0.831933 0.125 0.248447 0.77193 5066 5068 chrX 71897087 71903211 chrX:71897087-71903211:-:L1PA4:REF 12 - L1PA4 REF full-length NHSL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.698482 0.361596 0.85 0.812808 0.65445 0.3125 0.113573 0.449393 0.939683 0.773196 0.825203 0.980645 5067 5069 chrX 72440593 72446687 chrX:72440593-72446687:+:L1PA3:REF 11 + L1PA3 REF full-length HDAC8 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.947608 0.948571 0.990698 0.985816 0.915108 1.0 0.945652 1.0 0.850962 0.923913 0.981395 5068 5070 chrX 72585447 72591573 chrX:72585447-72591573:+:L1PA6:REF 11 + L1PA6 REF full-length PHKA1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.902439 0.958333 0.6 0.835714 0.25 1.0 0.5 0.71875 1.0 0.434783 0.243363 5069 5071 chrX 72980711 72986876 chrX:72980711-72986876:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872093 0.00775194 0.592593 0.443316 0.104513 0.345946 0.00809717 0.689266 0.89011 0.729412 0.707368 0.827586 5070 5072 chrX 73059663 73065814 chrX:73059663-73065814:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.779336 0.418472 0.348337 0.364156 0.0556542 0.08 0.0137773 0.3914 0.375736 0.364599 0.362166 0.796721 5071 5073 chrX 73106142 73112170 chrX:73106142-73112170:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.111699 0.873874 0.725526 0.853169 0.581491 0.649393 0.044708 0.834961 0.872549 0.75534 0.655935 0.876016 5072 5074 chrX 73184900 73190725 chrX:73184900-73190725:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.864286 0.304348 0.619926 0.641372 0.257696 0.298701 0.0185185 0.75644 0.718504 0.71867 0.486832 0.921739 5073 5075 chrX 73229846 73231543 chrX:73229846-73231543:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.554348 0.011811 0.0705882 0.0663507 0.0109589 0.0254237 0.0224719 0.360902 0.0264901 0.0632184 0.0171674 0.557377 5074 5076 chrX 73380991 73387013 chrX:73380991-73387013:+:L1HS:REF 11 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.262791 0.766532 0.819231 0.837659 0.573795 0.761159 0.188205 0.872881 0.784874 0.76139 0.942857 5075 5077 chrX 73498172 73498574 chrX:73498172-73498574:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.726027 0.0 0.181818 0.04 0.0150376 0.0 0.0 0.482759 0.0535714 0.08 0.0143885 0.8 5076 5078 chrX 73643004 73645115 chrX:73643004-73645115:-:L1P1:REF 12 - L1P1 REF 3prime-truncated CHIC1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.936369 0.573384 0.982308 0.984224 0.870257 0.974504 0.287197 0.928398 0.950431 0.963323 0.882649 0.954918 5077 5079 chrX 73767929 73768939 chrX:73767929-73768939:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891304 0.371212 0.19697 0.414634 0.208178 0.142857 0.0140845 0.513889 0.433824 0.375 0.544643 0.921053 5078 5080 chrX 74033943 74040075 chrX:74033943-74040075:-:L1PA5:REF 12 - L1PA5 REF full-length JPX 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.909644 0.931785 0.927469 0.922211 0.471789 0.735259 0.0417755 0.942708 0.965517 0.853801 0.706792 0.95992 5079 5081 chrX 74099380 74101196 chrX:74099380-74101196:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated FTX 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.88125 0.964824 0.974063 0.972832 0.673575 0.912114 0.084507 0.927536 0.98005 0.880556 0.619235 0.958333 5080 5082 chrX 74474478 74480631 chrX:74474478-74480631:-:L1PA4:REF 12 - L1PA4 REF full-length SLC16A2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890411 0.80303 0.988636 0.974684 0.544304 0.03125 0.015625 0.786364 0.991525 0.888325 0.808171 0.915385 5081 5083 chrX 74788952 74795000 chrX:74788952-74795000:-:L1PA2:REF 12 - L1PA2 REF full-length NEXMIF 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.739546 0.506378 0.697262 0.704584 0.490894 0.493266 0.178723 0.832618 0.883365 0.714286 0.583333 0.9163 5082 5084 chrX 74872993 74879015 chrX:74872993-74879015:-:L1PA3:REF 12 - L1PA3 REF full-length NEXMIF 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.860349 0.860769 0.871486 0.853683 0.735575 0.776553 0.244198 0.930419 0.931866 0.870813 0.789536 0.981997 5083 5085 chrX 75183022 75189043 chrX:75183022-75189043:-:L1PA5:REF 11 - L1PA5 REF full-length UPRT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,HEK293,H1 0.0416667 0.62069 0.644444 0.584416 0.325688 0.669231 0.0643564 0.6 0.61 0.678947 0.68595 5084 5086 chrX 75189044 75192098 chrX:75189044-75192098:-:L1P1:REF 12 - L1P1 REF 3prime-truncated UPRT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.889851 0.445055 0.527675 0.57489 0.407212 0.271739 0.307278 0.613636 0.960526 0.479452 0.37479 0.871069 5085 5087 chrX 75231937 75237961 chrX:75231937-75237961:+:L1PA3:REF 11 + L1PA3 REF full-length UPRT 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.490814 0.0236295 0.707031 0.761571 0.21384 0.557279 0.130607 0.460573 0.960526 0.649533 0.609848 5086 5088 chrX 75555159 75561178 chrX:75555159-75561178:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.828982 0.865714 0.867274 0.835661 0.609657 0.830679 0.0822532 0.875847 0.961141 0.864179 0.840064 0.96493 5087 5089 chrX 75561270 75567303 chrX:75561270-75567303:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.845138 0.807615 0.777372 0.724901 0.351583 0.635371 0.0122951 0.727823 0.923645 0.746898 0.631934 0.97479 5088 5090 chrX 75586528 75592512 chrX:75586528-75592512:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871146 0.962189 0.596888 0.67013 0.107468 0.231437 0.0283126 0.458333 0.650814 0.638149 0.353672 0.916129 5089 5091 chrX 75596508 75602623 chrX:75596508-75602623:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.913669 0.97619 0.741135 0.739274 0.253205 0.301887 0.0411523 0.862543 0.905983 0.701195 0.604255 0.945946 5090 5092 chrX 76005216 76007849 chrX:76005216-76007849:-:L1PA2:REF 12 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.136741 0.921381 0.890465 0.878763 0.626578 0.791809 0.203059 0.703704 0.954223 0.805709 0.766262 0.939453 5091 5093 chrX 76046791 76052939 chrX:76046791-76052939:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.880039 0.724274 0.76 0.782033 0.427378 0.668524 0.101329 0.744802 0.96828 0.771203 0.642548 0.919048 5092 5094 chrX 76068803 76074837 chrX:76068803-76074837:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.865385 0.809176 0.690187 0.757824 0.623567 0.602667 0.0474898 0.860856 0.89939 0.775338 0.672932 0.890173 5093 5095 chrX 76093507 76096303 chrX:76093507-76096303:-:L1PA7:REF 8 - L1PA7 REF 3prime-truncated 2102Ep,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.827586 0.222222 0.1875 0.0285714 0.611111 1.0 0.230769 0.0454545 5094 5096 chrX 76159024 76165478 chrX:76159024-76165478:+:L1PA7:REF 12 + L1PA7 REF full-length PBDC1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.761364 0.0 0.295455 0.244444 0.236842 0.0 0.0 0.6 0.837209 0.229508 0.306667 0.857143 5095 5097 chrX 76233354 76239154 chrX:76233354-76239154:+:L1HS:REF 11 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872905 0.405498 0.817241 0.648233 0.267442 0.0136986 0.711806 0.963801 0.592179 0.505131 0.941176 5096 5098 chrX 76260041 76261636 chrX:76260041-76261636:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.844444 0.2 0.570312 0.592683 0.292411 0.100917 0.0434783 0.704762 0.819444 0.606061 0.502408 0.877778 5097 5099 chrX 76267405 76273429 chrX:76267405-76273429:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.754967 0.75576 0.715789 0.649269 0.417778 0.549708 0.00793651 0.724324 0.813253 0.746753 0.526786 0.794118 5098 5100 chrX 76287997 76294015 chrX:76287997-76294015:+:L1PA3:REF 6 + L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,HEK293 0.633333 0.452381 0.537234 0.340206 0.302632 0.410891 5099 5101 chrX 76322775 76328806 chrX:76322775-76328806:-:L1HS:REF 11 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.815385 0.550349 0.768087 0.758814 0.417428 0.67619 0.0198675 0.66411 0.889034 0.771712 0.673744 5100 5102 chrX 76559551 76565702 chrX:76559551-76565702:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.688889 0.0210526 0.197674 0.159722 0.00757576 0.0 0.0 0.769231 0.5625 0.242424 0.0632911 0.5 5101 5103 chrX 76660277 76666402 chrX:76660277-76666402:-:L1PA3:REF 12 - L1PA3 REF full-length MIR325HG 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895131 0.73399 0.733813 0.721951 0.413699 0.341935 0.00952381 0.755396 0.85641 0.696 0.5 0.96 5102 5104 chrX 76720028 76726045 chrX:76720028-76726045:-:L1PA2:REF 12 - L1PA2 REF full-length MIR325HG 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.870795 0.582677 0.695028 0.678222 0.516328 0.625222 0.0383481 0.717579 0.814642 0.680815 0.551804 0.944664 5103 5105 chrX 76755586 76758811 chrX:76755586-76758811:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated MIR325HG 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.646355 0.553163 0.396384 0.409492 0.147941 0.04 0.0102041 0.351779 0.396476 0.551724 0.333333 0.851351 5104 5106 chrX 76777622 76781244 chrX:76777622-76781244:-:L1PA6:REF 9 - L1PA6 REF 3prime-truncated MIR325HG 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.85 0.36 0.425 0.0487805 0.0606061 0.0 0.333333 0.208333 0.233766 5105 5107 chrX 76840650 76843389 chrX:76840650-76843389:+:L1PA3:REF 1 + L1PA3 REF 3prime-truncated MIR325HG HEK293T 0.433333 5106 5108 chrX 76882208 76888356 chrX:76882208-76888356:+:L1PA4:REF 12 + L1PA4 REF full-length MIR325HG 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.804245 0.644909 0.550725 0.52 0.0240113 0.0804196 0.0151515 0.495495 0.400685 0.486381 0.154776 0.783505 5107 5109 chrX 76924366 76930511 chrX:76924366-76930511:+:L1PA3:REF 12 + L1PA3 REF full-length MIR325HG 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.614263 0.554849 0.46748 0.450192 0.176817 0.195329 0.0039604 0.30719 0.583514 0.477444 0.439394 0.681034 5108 5110 chrX 76950413 76952145 chrX:76950413-76952145:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated MIR325HG 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.791667 0.0641026 0.136364 0.0979021 0.0131579 0.0 0.0 0.122222 0.175926 0.0957447 0.0188679 0.779412 5109 5111 chrX 76978611 76984765 chrX:76978611-76984765:+:L1PA3:REF 12 + L1PA3 REF full-length MIR325HG 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.937743 0.808118 0.506667 0.623737 0.168646 0.0890411 0.0060241 0.466019 0.701754 0.566265 0.400504 1.0 5110 5112 chrX 77046226 77052252 chrX:77046226-77052252:+:L1PA3:REF 2 + L1PA3 REF full-length HEK293T,HEK293 0.207373 0.318408 5111 5113 chrX 77089274 77095414 chrX:77089274-77095414:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906005 0.859504 0.723473 0.620066 0.185471 0.52381 0.0263158 0.727941 0.778116 0.655678 0.423329 0.886957 5112 5114 chrX 77131980 77138133 chrX:77131980-77138133:-:L1PA4:REF 2 - L1PA4 REF full-length 2102Ep,MRC5 0.845361 0.726667 5113 5115 chrX 77253769 77254312 chrX:77253769-77254312:+:L1PA8:REF 12 + L1PA8 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.746212 0.329787 0.333333 0.323899 0.0276382 0.08867 0.0176471 0.72561 0.603604 0.226027 0.0673317 0.695122 5114 5116 chrX 77304725 77305044 chrX:77304725-77305044:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.883835 0.552897 0.624052 0.655367 0.428491 0.619048 0.0100167 0.801812 0.829733 0.632576 0.529932 0.837945 5115 5117 chrX 77410375 77412503 chrX:77410375-77412503:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated MRC5 0.0 5116 5118 chrX 77843842 77847573 chrX:77843842-77847573:-:L1P1:REF 12 - L1P1 REF 3prime-truncated MAGT1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.950051 0.985714 0.975 0.988426 0.709037 0.950787 0.812749 0.971491 0.993617 0.910638 0.782609 0.950495 5117 5119 chrX 78152445 78158029 chrX:78152445-78158029:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.859438 0.467054 0.599415 0.596033 0.113501 0.235 0.0830946 0.0983146 0.854067 0.610063 0.3 0.929936 5118 5120 chrX 78188849 78195000 chrX:78188849-78195000:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.932906 0.384063 0.770386 0.769376 0.274437 0.752475 0.104329 0.88 0.968267 0.778199 0.688535 0.847668 5119 5121 chrX 78288970 78295119 chrX:78288970-78295119:-:L1PA6:REF 7 - L1PA6 REF full-length CYSLTR1 2102Ep,MRC5,HEK293T,HeLaS3,HCT116,IMR90,HEK293 0.90625 0.40625 0.0135135 0.0 1.0 0.272727 0.0 5120 5122 chrX 78466225 78472391 chrX:78466225-78472391:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.81405 0.205607 0.59116 0.671053 0.0815851 0.28972 0.05 0.0701754 0.941463 0.669231 0.41502 0.929825 5121 5123 chrX 79205683 79211833 chrX:79205683-79211833:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.829154 0.207824 0.690647 0.75 0.231373 0.326829 0.0224719 0.823741 0.87574 0.665414 0.494676 0.94012 5122 5124 chrX 79926799 79932829 chrX:79926799-79932829:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.115697 0.481057 0.740867 0.691434 0.337662 0.561372 0.00382044 0.0621181 0.975673 0.611342 0.504747 0.876081 5123 5125 chrX 80151302 80157458 chrX:80151302-80157458:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.743769 0.596734 0.533019 0.0691589 0.244804 0.012285 0.00182482 0.976056 0.570328 0.406217 0.785185 5124 5126 chrX 80405241 80411257 chrX:80405241-80411257:+:L1PA3:REF 12 + L1PA3 REF full-length TENT5D 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0751973 0.645848 0.708038 0.722475 0.421899 0.600432 0.477666 0.10673 0.974922 0.687452 0.681211 0.835052 5125 5127 chrX 80462184 80468712 chrX:80462184-80468712:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.750865 0.0178571 0.352201 0.20323 0.0348837 0.0416667 0.418803 0.789474 0.980392 0.28 0.175347 0.684211 5126 5128 chrX 80472291 80475602 chrX:80472291-80475602:-:L1P3:REF 4 - L1P3 REF 3prime-truncated 2102Ep,HEK293T,HEK293,H1 1.0 0.0 0.0 0.357143 5127 5129 chrX 80518026 80521631 chrX:80518026-80521631:-:L1P3:REF 12 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.855263 0.0833333 0.472222 0.591324 0.141388 0.161616 0.333333 0.794118 0.909091 0.455882 0.248918 0.727273 5128 5130 chrX 80580911 80587335 chrX:80580911-80587335:-:L1PA8:REF 9 - L1PA8 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.642857 0.0 0.333333 0.0277778 0.0588235 0.214286 1.0 0.0 0.08 5129 5131 chrX 80766637 80771565 chrX:80766637-80771565:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated BRWD3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.872396 0.98913 0.988981 0.991254 0.515641 0.976982 0.606322 0.827068 0.978261 0.759398 0.633913 0.986395 5130 5132 chrX 80887611 80893748 chrX:80887611-80893748:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.76087 0.00510204 0.20438 0.444089 0.0157729 0.0552764 0.0 0.491935 0.971751 0.25 0.0636605 0.775862 5131 5133 chrX 80905077 80905430 chrX:80905077-80905430:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.908985 0.35533 0.800475 0.81516 0.271404 0.513889 0.0283401 0.816265 0.988048 0.734513 0.639185 0.855124 5132 5134 chrX 80976869 80982806 chrX:80976869-80982806:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.698567 0.775974 0.781504 0.836098 0.573329 0.405014 0.150633 0.615528 0.975581 0.614167 0.653902 0.905567 5133 5135 chrX 81026834 81032986 chrX:81026834-81032986:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.28033 0.617978 0.651605 0.737194 0.250627 0.425234 0.0222222 0.186667 0.973109 0.723842 0.515834 0.857143 5134 5136 chrX 81143378 81149629 chrX:81143378-81149629:+:L1PA7:REF 12 + L1PA7 REF full-length HMGN5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.829208 0.00847458 0.134276 0.153477 0.0123457 0.0 0.00549451 0.430435 0.894009 0.076555 0.00664452 0.441176 5135 5137 chrX 81339892 81345906 chrX:81339892-81345906:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.91173 0.783079 0.979091 0.981868 0.701149 0.653051 0.31324 0.924222 0.978463 0.830372 0.672904 0.970849 5136 5138 chrX 81683940 81688835 chrX:81683940-81688835:+:L1P1:REF 12 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.877315 0.158508 0.44385 0.524664 0.256296 0.268156 0.0174825 0.171975 0.75 0.706122 0.355037 0.673913 5137 5139 chrX 81743176 81749309 chrX:81743176-81749309:+:L1PA4:REF 6 + L1PA4 REF full-length HepG2,MRC5,HEK293T,MCF7,IMR90,HEK293 0.28125 0.355556 0.00934579 0.1 0.274194 0.0307692 5138 5140 chrX 81841153 81847184 chrX:81841153-81847184:+:L1HS:REF 10 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,HEK293,H1 0.832061 0.723639 0.735126 0.82315 0.442899 0.0193089 0.489685 0.983051 0.682494 0.923256 5139 5141 chrX 81981453 81987740 chrX:81981453-81987740:+:L1PA7:REF 12 + L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.875 0.00925926 0.202532 0.08867 0.0111732 0.020202 0.0 0.408451 0.986842 0.212121 0.193939 0.735294 5140 5142 chrX 82788276 82794455 chrX:82788276-82794455:+:L1PA6:REF 11 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.900901 0.414894 0.666667 0.608187 0.0283019 0.333333 0.027027 0.848485 0.961538 0.666667 0.212291 5141 5143 chrX 82802801 82808940 chrX:82802801-82808940:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.852657 0.041769 0.272966 0.49766 0.0789474 0.00619195 0.689103 0.929104 0.428571 0.200255 0.913043 5142 5144 chrX 82852260 82853243 chrX:82852260-82853243:-:L1PA5:REF 10 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293 0.72 0.027027 0.0 0.108434 0.0113636 0.0294118 0.0 0.84375 0.0263158 0.0120482 5143 5145 chrX 83059584 83065637 chrX:83059584-83065637:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.735744 0.706977 0.783133 0.835821 0.57553 0.660245 0.0231125 0.899048 0.970667 0.834448 0.698539 0.913534 Brouha_2003:0.4 Gardner_2017:1 5144 5146 chrX 83284220 83285979 chrX:83284220-83285979:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.866562 0.450734 0.746615 0.79337 0.153709 0.230588 0.011655 0.168798 0.971047 0.792857 0.296164 0.95098 5145 5147 chrX 83407135 83413200 chrX:83407135-83413200:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.833856 0.084507 0.560976 0.621859 0.271 0.386423 0.00808625 0.5553 0.97832 0.692308 0.537549 0.928571 5146 5148 chrX 83542396 83548420 chrX:83542396-83548420:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.124613 0.884326 0.775811 0.822118 0.594037 0.679525 0.03485 0.703704 0.980943 0.722284 0.7215 0.904665 5147 5149 chrX 83648724 83655748 chrX:83648724-83655748:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.836134 0.318021 0.559701 0.578641 0.0276625 0.5 0.0169492 0.543071 0.990099 0.553648 0.399142 0.917431 5148 5150 chrX 83750500 83756648 chrX:83750500-83756648:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.938776 0.646825 0.669065 0.755444 0.38482 0.532423 0.0 0.420635 0.960526 0.824561 0.520566 5149 5151 chrX 83838051 83839860 chrX:83838051-83839860:-:L1HS:REF 12 - L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.844367 0.725934 0.745592 0.704576 0.465839 0.631259 0.0171958 0.642468 0.955357 0.78125 0.575198 0.949791 5150 5152 chrX 84079011 84080387 chrX:84079011-84080387:+:L1P3:REF 12 + L1P3 REF 3prime-truncated RPS6KA6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.633758 0.0342679 0.840816 0.833333 0.312044 0.0887097 0.0182648 0.389189 0.884422 0.542857 0.353251 0.838983 5151 5153 chrX 85529213 85535230 chrX:85529213-85535230:+:L1PA3:REF 8 + L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293 0.116719 0.0106952 0.351801 0.140187 0.46281 0.762238 0.981818 0.400709 5152 5154 chrX 85733685 85734499 chrX:85733685-85734499:+:L1HS:REF 12 + L1HS REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.871111 0.544803 0.376812 0.643875 0.162698 0.037037 0.00980392 0.730769 0.931677 0.707317 0.164706 0.930233 5153 5155 chrX 85751722 85757867 chrX:85751722-85757867:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.929712 0.0643275 0.502513 0.513742 0.291193 0.0567823 0.00757576 0.88764 0.976879 0.567766 0.684362 0.871875 5154 5156 chrX 86054298 86054856 chrX:86054298-86054856:-:L1P2:REF 12 - L1P2 REF 3prime-truncated CHM 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.847619 0.683673 0.722022 0.721805 0.43738 0.555024 0.110048 0.883041 0.985 0.708609 0.374359 0.922078 5155 5157 chrX 86113292 86119348 chrX:86113292-86119348:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293,H1 0.831218 0.78125 0.720848 0.727034 0.567288 0.728155 0.858779 0.942529 0.792952 0.710027 0.94152 5156 5158 chrX 86289420 86295425 chrX:86289420-86295425:-:L1PA3:REF 3 - L1PA3 REF full-length DACH2 2102Ep,MRC5,HCT116 0.103586 0.828162 0.875969 5157 5159 chrX 86969631 86975651 chrX:86969631-86975651:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.629405 0.654155 0.790337 0.801179 0.438129 0.619804 0.0160966 0.72164 0.978507 0.776768 0.653 0.941368 5158 5160 chrX 87116306 87122337 chrX:87116306-87122337:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.86593 0.0567442 0.504771 0.406572 0.0882225 0.242204 0.0172612 0.530697 0.814077 0.467416 0.376691 0.777975 5159 5161 chrX 87443100 87449269 chrX:87443100-87449269:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887464 0.706767 0.664797 0.775 0.165624 0.42008 0.522349 0.840228 0.978495 0.796651 0.62822 0.934877 5160 5162 chrX 87821407 87827419 chrX:87821407-87827419:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.394425 0.846344 0.807459 0.855365 0.610626 0.635833 0.0273705 0.899083 0.977812 0.748159 0.749206 0.914563 5161 5163 chrX 88207885 88213919 chrX:88207885-88213919:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.51086 0.819349 0.840108 0.831897 0.545392 0.789318 0.0173502 0.702797 0.915094 0.757979 0.716981 0.919414 5162 5164 chrX 88694206 88696485 chrX:88694206-88696485:+:L1PA7:REF 1 + L1PA7 REF 3prime-truncated MRC5 0.0329218 5163 5165 chrX 88781409 88787562 chrX:88781409-88787562:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.915924 0.712413 0.77231 0.796178 0.418371 0.733167 0.0157407 0.795534 0.84674 0.641527 0.667677 0.950897 5164 5166 chrX 89292629 89298657 chrX:89292629-89298657:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.903895 0.624014 0.685744 0.630542 0.634561 0.0235294 0.773392 0.990045 0.789318 0.551592 0.842357 5165 5167 chrX 91469486 91471847 chrX:91469486-91471847:+:L1P3:REF 1 + L1P3 REF 3prime-truncated MRC5 0.0 5166 5168 chrX 91627096 91633253 chrX:91627096-91633253:+:L1PA3:REF 10 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.908451 0.767544 0.753086 0.852227 0.478417 0.820809 0.882353 0.969112 0.842466 0.718421 5167 5169 chrX 91752800 91758828 chrX:91752800-91758828:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0488003 0.739288 0.741267 0.709643 0.346559 0.473482 0.0178082 0.0120253 0.991654 0.770017 0.622348 0.948778 5168 5170 chrX 91819650 91825702 chrX:91819650-91825702:-:L1PA3:REF 12 - L1PA3 REF full-length PCDH11X 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.701602 0.850709 0.79598 0.794702 0.642857 0.887669 0.0157835 0.804798 0.977802 0.812048 0.766254 0.956067 5169 5171 chrX 92215061 92221212 chrX:92215061-92221212:+:L1PA3:REF 12 + L1PA3 REF full-length PCDH11X 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.859275 0.74216 0.757202 0.751984 0.526154 0.902582 0.0169173 0.80163 0.917808 0.856075 0.642053 0.889299 5170 5172 chrX 92254241 92256469 chrX:92254241-92256469:-:L1HS:REF 12 - L1HS REF 3prime-truncated PCDH11X 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.906667 0.784416 0.724965 0.735525 0.375341 0.907967 0.0337942 0.857143 0.952722 0.819188 0.594918 0.943694 5171 5173 chrX 93060238 93066331 chrX:93060238-93066331:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905956 0.598425 0.582474 0.681592 0.55 0.80057 0.00632911 0.515873 0.973214 0.674931 0.45875 0.916667 5172 5174 chrX 93627330 93633481 chrX:93627330-93633481:+:L1PA3:REF 7 + L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,IMR90,HEK293 0.769231 0.596154 0.527273 0.137931 0.156863 0.5 0.341772 5173 5175 chrX 93939741 93945900 chrX:93939741-93945900:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.437333 0.73147 0.720264 0.612931 0.664835 0.0625 0.808023 0.868188 0.743363 0.728065 0.806236 5174 5176 chrX 94862375 94868400 chrX:94862375-94868400:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.415542 0.216176 0.623588 0.669347 0.344329 0.380876 0.011811 0.0147401 0.97188 0.673012 0.572575 0.965976 5175 5177 chrX 96057824 96063842 chrX:96057824-96063842:-:L1HS:REF 12 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0372024 0.822314 0.88102 0.828496 0.598837 0.676056 0.0303738 0.468575 0.527744 0.78882 0.929978 0.883838 Brouha_2003:42.3 5176 5178 chrX 96269391 96275726 chrX:96269391-96275726:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.759036 0.633262 0.661355 0.646645 0.288994 0.445682 0.0233723 0.8 0.865269 0.680085 0.40445 0.836565 5177 5179 chrX 96427606 96430043 chrX:96427606-96430043:-:L1PA7:REF 6 - L1PA7 REF 3prime-truncated 2102Ep,BJ,HEK293T,HeLaS3,IMR90,HEK293 0.475 0.952941 0.722846 0.0349854 0.725806 0.641509 5178 5180 chrX 96597640 96603783 chrX:96597640-96603783:+:L1PA5:REF 5 + L1PA5 REF full-length 2102Ep,MRC5,HEK293T,HeLaS3,HEK293 0.892857 0.809278 0.440367 0.455882 0.766129 5179 5181 chrX 96809518 96815659 chrX:96809518-96815659:-:L1PA6:REF 2 - L1PA6 REF full-length DIAPH2 MRC5,HEK293T 0.992126 0.8375 5180 5182 chrX 97509510 97515511 chrX:97509510-97515511:-:L1PA3:REF 12 - L1PA3 REF full-length DIAPH2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.752737 0.974775 0.978756 0.970986 0.735547 0.939317 0.173154 0.925484 0.979394 0.908411 0.80618 0.99026 5181 5183 chrX 97578170 97584188 chrX:97578170-97584188:-:L1PA3:REF 1 - L1PA3 REF full-length DIAPH2 HEK293 0.789062 5182 5184 chrX 98234872 98241308 chrX:98234872-98241308:-:L1PA7:REF 1 - L1PA7 REF full-length MRC5 0.359551 5183 5185 chrX 98300352 98306364 chrX:98300352-98306364:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.901322 0.747573 0.70227 0.758095 0.391149 0.501506 0.0217984 0.0873533 0.960274 0.805153 0.72027 0.961538 5184 5186 chrX 98424325 98430357 chrX:98424325-98430357:-:L1PA2:REF 11 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.908644 0.692456 0.819723 0.778423 0.652464 0.644018 0.0258621 0.974563 0.836364 0.82235 0.940334 5185 5187 chrX 98687494 98693514 chrX:98687494-98693514:-:L1PA2:REF 4 - L1PA2 REF full-length 2102Ep,MRC5,HEK293T,HEK293 0.741007 0.712644 0.655556 0.802083 5186 5188 chrX 99234633 99240760 chrX:99234633-99240760:+:L1PA4:REF 10 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.936937 0.211864 0.523256 0.611446 0.0751174 0.0982143 0.0970874 0.942529 0.468354 0.275304 5187 5189 chrX 100156850 100163024 chrX:100156850-100163024:-:L1PA7:REF 1 - L1PA7 REF full-length MRC5 0.0689655 5188 5190 chrX 100236224 100236943 chrX:100236224-100236943:-:L1P3:REF 7 - L1P3 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,HeLaS3,IMR90,HEK293 0.232143 0.272727 0.523985 0.167969 0.125 0.427273 0.402174 5189 5191 chrX 100255486 100261633 chrX:100255486-100261633:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.883182 0.230563 0.672857 0.526613 0.137227 0.161054 0.00779727 0.453333 0.958692 0.680782 0.92663 5190 5192 chrX 100550262 100555448 chrX:100550262-100555448:+:L1PA2:REF 12 + L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.100059 0.67874 0.779327 0.811871 0.660918 0.732601 0.0895397 0.885463 0.952269 0.732943 0.758865 0.849817 5191 5193 chrX 101524342 101530496 chrX:101524342-101530496:+:L1PA6:REF 10 + L1PA6 REF full-length ARMCX4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293 0.492308 0.430556 0.942857 0.437255 0.0796813 0.0447761 0.00526316 0.538462 0.728571 0.400871 5192 5194 chrX 101580035 101586192 chrX:101580035-101586192:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.887097 0.414566 0.575704 0.592828 0.319347 0.732057 0.0183486 0.638003 0.979212 0.802367 0.708481 0.91945 5193 5195 chrX 101711073 101717106 chrX:101711073-101717106:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.888579 0.835279 0.814126 0.8 0.543156 0.827451 0.0114943 0.831989 0.976303 0.785321 0.761431 0.956923 5194 5196 chrX 101809661 101811838 chrX:101809661-101811838:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.873054 0.210448 0.692101 0.721127 0.310591 0.543424 0.0131796 0.751894 0.917197 0.569767 0.515408 0.932927 5195 5197 chrX 101949871 101950261 chrX:101949871-101950261:+:L1PA8:REF 1 + L1PA8 REF 3prime-truncated MRC5 0.173913 5196 5198 chrX 102685896 102692023 chrX:102685896-102692023:-:L1PA4:REF 12 - L1PA4 REF full-length ARMCX5-GPRASP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.899911 0.982293 0.962169 0.986423 0.646411 0.979196 0.42069 0.49 0.986607 0.805517 0.635316 0.9375 5197 5199 chrX 102871176 102877321 chrX:102871176-102877321:-:L1PA4:REF 12 - L1PA4 REF full-length ARMCX5-GPRASP2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.967611 0.958904 0.963542 0.966457 0.77993 0.974026 0.96129 0.825175 0.972222 0.783217 0.687151 0.965909 5198 5200 chrX 103020459 103026616 chrX:103020459-103026616:-:L1PA3:REF 5 - L1PA3 REF full-length 2102Ep,MRC5,HEK293T,K562,HEK293 0.585714 0.602837 0.457317 0.2 0.565022 5199 5201 chrX 103891506 103897537 chrX:103891506-103897537:-:L1PA2:REF 11 - L1PA2 REF full-length TMSB15B-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.028115 0.883585 0.834978 0.549763 0.505968 0.725183 0.0178236 0.867572 0.873274 0.718104 0.702187 5200 5202 chrX 103998475 103998874 chrX:103998475-103998874:-:L1P3:REF 6 - L1P3 REF 3prime-truncated 2102Ep,HepG2,MRC5,HEK293T,K562,HEK293 0.893805 0.0 0.195312 0.438202 0.0 0.394958 5201 5203 chrX 104026871 104032902 chrX:104026871-104032902:-:L1PA2:REF 8 - L1PA2 REF full-length H2BFM 2102Ep,HepG2,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.238298 0.834532 0.861446 0.709852 0.724359 0.916667 0.7 0.776805 5202 5204 chrX 104360639 104366787 chrX:104360639-104366787:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.662519 0.306954 0.55814 0.585135 0.473351 0.752427 0.0172414 0.741803 0.663043 0.795367 0.672922 0.784 5203 5205 chrX 104404429 104409366 chrX:104404429-104409366:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.824176 0.050885 0.501938 0.483696 0.140879 0.253602 0.00917431 0.133047 0.448171 0.501362 0.534007 0.901515 5204 5206 chrX 104602037 104608348 chrX:104602037-104608348:+:L1PA7:REF 1 + L1PA7 REF full-length IL1RAPL2 MRC5 0.0166667 5205 5207 chrX 104672099 104678122 chrX:104672099-104678122:-:L1PA2:REF 12 - L1PA2 REF full-length IL1RAPL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.258185 0.69175 0.782063 0.725255 0.60583 0.596796 0.0420673 0.936 0.691346 0.6983 0.731892 0.881844 5206 5208 chrX 104904301 104910378 chrX:104904301-104910378:-:L1PA2:REF 12 - L1PA2 REF full-length IL1RAPL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0507614 0.709713 0.28034 0.122683 0.566681 0.576846 0.0251256 0.146853 0.965174 0.392241 0.756563 0.235484 5207 5209 chrX 104950876 104951201 chrX:104950876-104951201:-:L1PA3:REF 12 - L1PA3 REF 3prime-truncated IL1RAPL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.919479 0.767347 0.835423 0.781568 0.562916 0.547893 0.0199637 0.853765 0.975673 0.730337 0.684029 0.933884 5208 5210 chrX 105029253 105035391 chrX:105029253-105035391:-:L1PA4:REF 12 - L1PA4 REF full-length IL1RAPL2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.817694 0.386889 0.427469 0.300078 0.0547445 0.210863 0.00701754 0.65641 0.914172 0.495702 0.281734 0.752508 5209 5211 chrX 105796906 105802919 chrX:105796906-105802919:+:L1PA3:REF 7 + L1PA3 REF full-length 2102Ep,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.0725191 0.82 0.517312 0.916667 0.917582 0.714286 0.810101 5210 5212 chrX 105959686 105965737 chrX:105959686-105965737:+:L1PA4:REF 12 + L1PA4 REF full-length NRK 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.892857 0.475275 0.45 0.528 0.183471 0.209091 0.00877193 0.694444 0.914894 0.639831 0.486395 0.819277 5211 5213 chrX 106469285 106475319 chrX:106469285-106475319:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.101897 0.96134 0.884086 0.890539 0.852618 0.759259 0.0928571 0.958702 0.976096 0.798046 0.857104 0.91858 Rodriguez-Martin_2020:3,Tubio_2014:1 5212 5214 chrX 106490609 106494307 chrX:106490609-106494307:-:L1PA7:REF 12 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.608844 0.772973 0.508333 0.159533 0.473098 0.185185 0.0277778 0.833333 0.973958 0.5 0.596252 0.736842 5213 5215 chrX 106765719 106771870 chrX:106765719-106771870:-:L1PA6:REF 11 - L1PA6 REF full-length RNF128 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,HCT116,IMR90,HEK293,H1 0.862069 0.977273 0.52809 0.566474 0.596583 0.0361991 0.0 0.961538 0.463203 0.505109 0.805556 5214 5216 chrX 107155767 107161785 chrX:107155767-107161785:+:L1PA2:REF 12 + L1PA2 REF full-length NUP62CL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0518659 0.960731 0.365949 0.114301 0.583867 0.993481 0.0127451 0.12 0.0791815 0.484848 0.545215 0.340528 5215 5217 chrX 107364336 107370349 chrX:107364336-107370349:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.145957 0.82294 0.816116 0.801435 0.789935 0.771684 0.215475 0.883495 0.970392 0.73628 0.85076 0.844498 5216 5218 chrX 108277015 108283183 chrX:108277015-108283183:+:L1PA3:REF 12 + L1PA3 REF full-length COL4A6 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.899908 0.980704 0.724576 0.977428 0.762842 0.96347 0.0112923 0.839786 0.966667 0.864116 0.710541 0.95203 5217 5219 chrX 108542109 108548255 chrX:108542109-108548255:-:L1PA5:REF 12 - L1PA5 REF full-length COL4A5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.950957 0.988652 0.856863 0.990274 0.926718 0.990291 0.47806 0.890625 0.977778 0.827068 0.581378 0.959184 5218 5220 chrX 109010403 109015566 chrX:109010403-109015566:+:L1PA5:REF 12 + L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.75 0.00847458 0.180451 0.291066 0.0514139 0.0176471 0.00598802 0.0396825 0.970149 0.195266 0.149457 0.766667 5219 5221 chrX 109019329 109025469 chrX:109019329-109025469:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.878788 0.00843882 0.314815 0.366795 0.0418848 0.010101 0.0 0.0769231 0.934066 0.190476 0.164179 0.955224 5220 5222 chrX 109083336 109089721 chrX:109083336-109089721:-:L1PA7:REF 9 - L1PA7 REF full-length 2102Ep,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.833333 0.423077 0.431034 0.0727273 0.0454545 0.272727 0.870968 0.6 0.305085 5221 5223 chrX 109113307 109119363 chrX:109113307-109119363:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293,H1 0.773852 0.563282 0.689655 0.552785 0.315207 0.0200861 0.486922 0.967049 0.654378 0.463768 0.900383 5222 5224 chrX 109644666 109650692 chrX:109644666-109650692:+:L1PA3:REF 5 + L1PA3 REF full-length ACSL4 2102Ep,MRC5,HEK293T,IMR90,HEK293 0.867188 0.991228 0.84689 0.944954 0.8 5223 5225 chrX 110605828 110611851 chrX:110605828-110611851:+:L1PA3:REF 11 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.864392 0.775039 0.837171 0.493996 0.341023 0.0212766 0.068125 0.898227 0.699417 0.699748 0.696104 5224 5226 chrX 110640008 110646163 chrX:110640008-110646163:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.890653 0.4637 0.522667 0.399734 0.135204 0.068323 0.00527704 0.493548 0.511173 0.435159 0.433566 0.844595 5225 5227 chrX 110656903 110663049 chrX:110656903-110663049:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.25 5226 5228 chrX 110816764 110822773 chrX:110816764-110822773:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.470507 0.941068 0.94162 0.856649 0.798809 0.82138 0.0206612 0.918103 0.940161 0.898089 0.851315 0.984169 5227 5229 chrX 110898394 110904467 chrX:110898394-110904467:-:L1PA6:REF 11 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.884298 0.0 0.492958 0.551887 0.135 0.25 0.0 0.66129 0.298507 0.513761 0.404762 5228 5230 chrX 111588704 111594727 chrX:111588704-111594727:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.380737 0.870853 0.8281 0.845094 0.76552 0.785408 0.0892857 0.942073 0.970699 0.723564 0.828102 0.965691 5229 5231 chrX 111962838 111968972 chrX:111962838-111968972:+:L1PA4:REF 12 + L1PA4 REF full-length TRPC5 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.904678 0.568581 0.78025 0.79708 0.572313 0.611554 0.0383632 0.728353 0.984743 0.834671 0.694247 0.931034 5230 5232 chrX 112180878 112183698 chrX:112180878-112183698:+:L1P3:REF 2 + L1P3 REF 3prime-truncated RTL4 MRC5,HeLaS3 0.155925 0.0717131 5231 5233 chrX 112240676 112246853 chrX:112240676-112246853:-:L1PA6:REF 3 - L1PA6 REF full-length RTL4 MRC5,HEK293T,HEK293 0.643411 0.218182 0.642857 5232 5234 chrX 112314520 112314522 chrX:112314520-112314522:-:L1HS:NONREF 8 - L1HS KNR euL1db:mrip8826,1KGP:L1_umary_LINE1_3109,Philippe:EXP_ID_1601 RTL4 HepG2,BJ,HEK293T,HeLaS3,HCT116,IMR90,HEK293,H1 0.644554 0.751634 0.470588 0.509804 0.915989 0.709059 0.571811 0.853598 5233 5235 chrX 112326145 112332160 chrX:112326145-112332160:+:L1PA3:REF 7 + L1PA3 REF full-length RTL4 2102Ep,HepG2,MRC5,HEK293T,MCF7,HCT116,HEK293 0.867257 0.584 0.623188 0.553846 0.663462 0.989011 0.527778 5234 5236 chrX 112461810 112467973 chrX:112461810-112467973:+:L1PA7:REF 12 + L1PA7 REF full-length RTL4 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.666667 0.015873 0.160714 0.100358 0.119134 0.0361446 0.00819672 0.27551 0.813008 0.39823 0.164038 0.815789 5235 5237 chrX 112502039 112508065 chrX:112502039-112508065:+:L1PA3:REF 3 + L1PA3 REF full-length MRC5,HEK293T,HEK293 0.8125 0.52381 0.563158 5236 5238 chrX 112590123 112596271 chrX:112590123-112596271:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.905956 0.743671 0.67619 0.822981 0.565733 0.628415 0.027027 0.527473 0.960912 0.806569 0.575163 0.867925 5237 5239 chrX 112718609 112724627 chrX:112718609-112724627:+:L1PA2:REF 11 + L1PA2 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.781942 0.855364 0.889319 0.843826 0.852257 0.117574 0.899549 0.984236 0.76267 0.8156 0.521635 5238 5240 chrX 113337822 113343853 chrX:113337822-113343853:-:L1PA2:REF 11 - L1PA2 REF full-length LOC101928437 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.903204 0.643556 0.836207 0.852574 0.838755 0.020339 0.738501 0.979817 0.889831 0.827713 0.957692 5239 5241 chrX 114700576 114706720 chrX:114700576-114706720:+:L1PA3:REF 5 + L1PA3 REF full-length HTR2C 2102Ep,HepG2,MRC5,HEK293T,HEK293 0.955556 0.622222 0.694118 0.622222 0.646465 5240 5242 chrX 114720516 114726531 chrX:114720516-114726531:-:L1PA2:REF 12 - L1PA2 REF full-length HTR2C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.944679 0.714115 0.809868 0.836226 0.588673 0.599237 0.00718232 0.31681 0.975086 0.812215 0.559357 0.948179 5241 5243 chrX 114830697 114836732 chrX:114830697-114836732:-:L1PA2:REF 12 - L1PA2 REF full-length HTR2C 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0937653 0.58472 0.85359 0.813712 0.526895 0.534091 0.00869565 0.257122 0.978752 0.749091 0.682991 0.943715 5242 5244 chrX 115080436 115086611 chrX:115080436-115086611:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.903349 0.169355 0.938776 0.964315 0.599725 0.274559 0.0170261 0.144578 0.968354 0.849765 0.60262 0.96281 5243 5245 chrX 116121201 116127338 chrX:116121201-116127338:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.829352 0.310638 0.323383 0.300469 0.175439 0.0669856 0.0101523 0.463415 0.943182 0.336634 0.149105 0.802198 5244 5246 chrX 116159201 116165340 chrX:116159201-116165340:+:L1PA3:REF 11 + L1PA3 REF full-length AGTR2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,H1 0.856855 0.182692 0.474548 0.494797 0.271685 0.557143 0.0192308 0.801105 0.960549 0.58547 0.870588 5245 5247 chrX 116514614 116520629 chrX:116514614-116520629:-:L1PA3:REF 10 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293,H1 0.0513123 0.0215924 0.727339 0.754794 0.217774 0.0104221 0.0220624 0.547294 0.440292 0.517865 5246 5248 chrX 116964806 116970835 chrX:116964806-116970835:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.816568 0.397559 0.774383 0.729323 0.367456 0.681404 0.0174622 0.86924 0.977077 0.770784 0.568246 0.923833 5247 5249 chrX 117260691 117266821 chrX:117260691-117266821:+:L1PA3:REF 8 + L1PA3 REF full-length 2102Ep,MRC5,HEK293T,HeLaS3,MCF7,HCT116,HEK293,H1 0.819474 0.682765 0.317158 0.750288 0.76182 0.888646 0.613181 0.844904 5248 5250 chrX 117443145 117449574 chrX:117443145-117449574:+:L1PA7:REF 2 + L1PA7 REF full-length 2102Ep,MRC5 0.157895 0.0224215 5249 5251 chrX 117555691 117561795 chrX:117555691-117561795:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.853994 0.644689 0.50813 0.465028 0.0603589 0.728395 0.0132159 0.84466 0.942085 0.502183 0.556876 0.92623 5250 5252 chrX 117727933 117733746 chrX:117727933-117733746:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.260209 0.771562 0.717105 0.789921 0.557882 0.74026 0.0232258 0.889465 0.934328 0.579655 0.666859 0.879859 5251 5253 chrX 117757179 117763331 chrX:117757179-117763331:-:L1PA3:REF 5 - L1PA3 REF full-length 2102Ep,HepG2,MRC5,HEK293T,HEK293 0.966667 0.789916 0.723473 0.350962 0.660256 5252 5254 chrX 117827446 117833592 chrX:117827446-117833592:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.865183 0.465686 0.731366 0.684256 0.516435 0.622754 0.0171527 0.83871 0.934664 0.714286 0.635556 0.910204 5253 5255 chrX 117873996 117880023 chrX:117873996-117880023:-:L1PA2:REF 9 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.571429 0.657303 0.643411 0.745098 0.559459 0.70339 0.846535 0.697368 0.667969 5254 5256 chrX 118241706 118247865 chrX:118241706-118247865:+:L1PA4:REF 10 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,MCF7,HCT116,IMR90,HEK293 0.658333 0.53913 0.906667 0.522255 0.353414 0.651429 0.653333 1.0 0.75 0.49635 5255 5257 chrX 119435468 119441493 chrX:119435468-119441493:-:L1HS:REF 12 - L1HS REF full-length SLC25A43 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0763797 0.976361 0.97948 0.981567 0.247924 0.981803 0.0184049 0.65446 0.983617 0.745394 0.896788 0.81441 5256 5258 chrX 119961489 119963610 chrX:119961489-119963610:+:L1PA5:REF 1 + L1PA5 REF 3prime-truncated HEK293 0.462963 5257 5259 chrX 120827144 120833523 chrX:120827144-120833523:-:L1PA8:REF 1 - L1PA8 REF full-length MRC5 0.282609 5258 5260 chrX 121473835 121475357 chrX:121473835-121475357:-:L1PA7:REF 1 - L1PA7 REF 3prime-truncated MRC5 0.0116279 5259 5261 chrX 121531198 121537361 chrX:121531198-121537361:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.876685 0.566372 0.737425 0.655446 0.313958 0.631195 0.494767 0.861745 0.971609 0.658503 0.565918 0.908587 5260 5262 chrX 121877356 121883520 chrX:121877356-121883520:+:L1PA3:REF 10 + L1PA3 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.929283 0.979545 0.831015 0.726036 0.767905 0.440199 0.956879 0.98407 0.862977 0.862532 5261 5263 chrX 123648005 123654416 chrX:123648005-123654416:+:L1PA7:REF 6 + L1PA7 REF full-length THOC2 HepG2,MRC5,HEK293T,MCF7,IMR90,HEK293 0.698413 0.626667 0.139175 0.345455 0.678571 0.42723 5262 5264 chrX 124104425 124110535 chrX:124104425-124110535:-:L1PA4:REF 12 - L1PA4 REF full-length STAG2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.897881 0.941417 0.974085 0.985985 0.669755 0.951311 0.888889 0.932203 0.86921 0.77479 0.666217 0.958209 5263 5265 chrX 124582570 124588702 chrX:124582570-124588702:+:L1PA3:REF 12 + L1PA3 REF full-length TENM1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891787 0.86105 0.806905 0.635319 0.400884 0.371429 0.607083 0.421442 0.861972 0.818182 0.590401 0.961977 5264 5266 chrX 124751493 124757642 chrX:124751493-124757642:-:L1PA3:REF 12 - L1PA3 REF full-length TENM1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.927308 0.80816 0.744643 0.807164 0.467623 0.216749 0.902326 0.774046 0.837912 0.764259 0.683209 0.951542 5265 5267 chrX 125608955 125614969 chrX:125608955-125614969:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.143449 0.865182 0.817031 0.796901 0.646996 0.766337 0.314206 0.614849 0.913756 0.724888 0.813512 0.880676 5266 5268 chrX 125838860 125845012 chrX:125838860-125845012:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.924561 0.507707 0.731579 0.71151 0.434265 0.417362 0.0104895 0.476874 0.848629 0.76834 0.617184 0.947075 5267 5269 chrX 125917350 125923787 chrX:125917350-125923787:-:L1PA8:REF 12 - L1PA8 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.818182 0.0 0.422222 0.394737 0.0169492 0.030303 0.0196078 0.016129 0.125 0.366667 0.00396825 0.868421 5268 5270 chrX 126104124 126110137 chrX:126104124-126110137:-:L1PA3:REF 12 - L1PA3 REF full-length LOC101928495 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.05 0.765006 0.698287 0.651127 0.451888 0.597802 0.0289687 0.116129 0.698198 0.668192 0.620294 0.936759 5269 5271 chrX 126185218 126191252 chrX:126185218-126191252:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.90132 0.693927 0.749807 0.812856 0.467145 0.547672 0.0141732 0.707143 0.759519 0.779058 0.593764 0.966146 5270 5272 chrX 126229456 126235427 chrX:126229456-126235427:-:L1PA3:REF 9 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,MCF7,HCT116,IMR90,HEK293 0.938095 0.896104 0.516484 0.715909 0.431335 0.539326 0.884892 0.72381 0.549784 5271 5273 chrX 126459945 126460670 chrX:126459945-126460670:+:L1PA4:REF 12 + L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0663842 0.0214439 0.739694 0.77193 0.466842 0.51585 0.00102249 0.665031 0.769802 0.584071 0.560117 0.156334 5272 5274 chrX 126946790 126952887 chrX:126946790-126952887:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.848485 0.00909091 0.288889 0.232804 0.0159574 0.0416667 0.0 0.305085 0.1 0.283582 0.216667 0.793103 5273 5275 chrX 127116697 127122729 chrX:127116697-127122729:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.355326 0.686727 0.731034 0.695205 0.486178 0.518225 0.015311 0.727738 0.735221 0.622691 0.543383 0.87931 5274 5276 chrX 127250463 127256492 chrX:127250463-127256492:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.396459 0.789186 0.807402 0.761364 0.566044 0.661078 0.0175285 0.751381 0.860593 0.732759 0.665239 0.871429 5275 5277 chrX 127362223 127368248 chrX:127362223-127368248:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.624593 0.751859 0.777202 0.796091 0.503142 0.647315 0.0159574 0.766789 0.902542 0.653618 0.613358 0.912023 5276 5278 chrX 127788799 127794900 chrX:127788799-127794900:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.772321 0.333333 0.34965 0.362857 0.349876 0.0327869 0.0 0.349593 0.13245 0.333333 0.274359 0.705128 5277 5279 chrX 128669036 128675516 chrX:128669036-128675516:-:L1PA7:REF 1 - L1PA7 REF full-length MRC5 0.0181818 5278 5280 chrX 128732737 128738890 chrX:128732737-128738890:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.879845 0.400293 0.463529 0.449477 0.0621415 0.107143 0.0071599 0.326923 0.205955 0.512579 0.235133 0.878173 5279 5281 chrX 128782654 128788670 chrX:128782654-128788670:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0901549 0.964452 0.843284 0.801418 0.522375 0.823315 0.0143988 0.619762 0.915254 0.728909 0.674383 0.908943 5280 5282 chrX 129337055 129343063 chrX:129337055-129343063:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.36768 0.885604 0.793151 0.687023 0.508693 0.720219 0.0242424 0.0608155 0.935982 0.562304 0.402134 0.190605 5281 5283 chrX 130517377 130523407 chrX:130517377-130523407:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.133789 0.949818 0.886288 0.882442 0.820429 0.841719 0.445444 0.924742 0.964459 0.607585 0.84818 0.902985 5282 5284 chrX 130567667 130573661 chrX:130567667-130573661:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.470209 0.958627 0.959008 0.915562 0.799228 0.872666 0.461878 0.900515 0.974388 0.815634 0.836355 0.926421 5283 5285 chrX 130958931 130964957 chrX:130958931-130964957:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0171527 0.0243655 0.330391 0.0578991 0.166667 0.0176211 0.485106 0.0547588 0.976331 0.498471 0.387466 0.00649351 5284 5286 chrX 131123218 131129243 chrX:131123218-131129243:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.510381 0.528889 0.631124 0.606965 0.173489 0.0187266 0.0692695 0.795977 0.544389 0.586578 0.850356 5285 5287 chrX 131152270 131158293 chrX:131152270-131158293:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.119589 0.374897 0.14375 0.128598 0.539852 0.606725 0.0101523 0.923684 0.872812 0.478814 0.616602 0.202046 5286 5288 chrX 131245544 131251574 chrX:131245544-131251574:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0629125 0.958206 0.858683 0.856747 0.688375 0.905476 0.00665927 0.935813 0.985612 0.777958 0.849962 0.936475 5287 5289 chrX 131378334 131384369 chrX:131378334-131384369:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.12318 0.851501 0.809322 0.793313 0.471229 0.961538 0.349462 0.83 0.987179 0.708333 0.755043 0.847222 5288 5290 chrX 131524490 131530619 chrX:131524490-131530619:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891892 0.0172414 0.37246 0.318544 0.151951 0.811765 0.186567 0.831615 0.983193 0.30038 0.180851 0.958974 5289 5291 chrX 131552691 131556913 chrX:131552691-131556913:+:L1PA3:REF 10 + L1PA3 REF 3prime-truncated OR13H1 2102Ep,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.802326 0.579439 0.624224 0.393491 0.882353 0.626374 0.735099 0.830409 0.607843 0.527859 5290 5292 chrX 131578680 131584735 chrX:131578680-131584735:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.0211166 0.903907 0.887885 0.894414 0.658461 0.00474183 0.0354119 0.95119 0.00685558 0.747841 0.795953 5291 5293 chrX 131655921 131659146 chrX:131655921-131659146:+:L1P3:REF 1 + L1P3 REF 3prime-truncated MRC5 0.59322 5292 5294 chrX 131663952 131669984 chrX:131663952-131669984:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.143552 0.632454 0.815279 0.809285 0.563291 0.766372 0.0179775 0.94403 0.966759 0.630137 0.794485 0.772201 5293 5295 chrX 132156145 132162158 chrX:132156145-132162158:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.428138 0.885643 0.736138 0.690455 0.78085 0.850722 0.208401 0.920833 0.938525 0.691358 0.775952 0.666667 5294 5296 chrX 132244038 132250171 chrX:132244038-132250171:-:L1PA4:REF 12 - L1PA4 REF full-length RAP2C-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.902263 0.955882 0.831169 0.850877 0.476677 0.961326 0.0145985 0.875479 0.978758 0.860759 0.597352 0.925926 5295 5297 chrX 132284468 132290617 chrX:132284468-132290617:-:L1PA5:REF 12 - L1PA5 REF full-length RAP2C-AS1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.918861 0.969136 0.927315 0.953157 0.663669 0.94847 0.0341686 0.895805 0.960177 0.838471 0.778474 0.974104 5296 5298 chrX 133009673 133015829 chrX:133009673-133015829:+:L1PA4:REF 8 + L1PA4 REF full-length USP26 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,IMR90,HEK293 0.894444 0.626506 0.825758 0.78626 0.667939 0.977273 0.812903 0.703833 5297 5299 chrX 133621186 133627320 chrX:133621186-133627320:+:L1PA5:REF 12 + L1PA5 REF full-length GPC3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.964912 0.986175 0.904762 0.836032 0.814917 0.609524 0.064 0.0204082 0.984733 0.802721 0.859649 0.985507 5298 5300 chrX 134044163 134050309 chrX:134044163-134050309:-:L1PA4:REF 12 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.863409 0.423077 0.476281 0.447425 0.387755 0.0725 0.00924214 0.670823 0.824176 0.404867 0.426559 0.942623 5299 5301 chrX 134061348 134062780 chrX:134061348-134062780:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.843602 0.1 0.347619 0.307851 0.635009 0.317919 0.0 0.755656 0.810997 0.396624 0.521739 0.903614 5300 5302 chrX 135276490 135282951 chrX:135276490-135282951:-:L1PA7:REF 1 - L1PA7 REF full-length ZNF75D MRC5 0.0 5301 5303 chrX 136440268 136446301 chrX:136440268-136446301:-:L1PA2:REF 12 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.378421 0.801057 0.849242 0.871316 0.8904 0.938426 0.0944521 0.937599 0.959081 0.863441 0.890411 0.95746 5302 5304 chrX 137074722 137080869 chrX:137074722-137080869:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.867026 0.844673 0.773167 0.740369 0.520583 0.619444 0.0447942 0.517308 0.854415 0.713115 0.765439 0.965714 5303 5305 chrX 137672117 137678261 chrX:137672117-137678261:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.858929 0.680723 0.699605 0.747899 0.421053 0.392593 0.0745763 0.841615 0.829736 0.744615 0.647904 0.984127 5304 5306 chrX 137767831 137769461 chrX:137767831-137769461:-:L1PA5:REF 12 - L1PA5 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.920886 0.61898 0.668977 0.686853 0.328405 0.532134 0.00622084 0.837989 0.643411 0.725367 0.516739 0.954733 5305 5307 chrX 137791733 137795076 chrX:137791733-137795076:+:L1PA7:REF 2 + L1PA7 REF 3prime-truncated MRC5,HEK293 0.166667 0.324675 5306 5308 chrX 137959684 137965821 chrX:137959684-137965821:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.0215983 5307 5309 chrX 138073442 138079552 chrX:138073442-138079552:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.865 0.019544 0.338912 0.541195 0.145349 0.131148 0.0 0.634259 0.114407 0.285 0.191781 0.96 5308 5310 chrX 138105302 138111440 chrX:138105302-138111440:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.859873 0.024735 0.317365 0.380399 0.0745033 0.0723684 0.0052356 0.152778 0.407725 0.397993 0.257364 0.843243 5309 5311 chrX 138230739 138236890 chrX:138230739-138236890:+:L1PA6:REF 1 + L1PA6 REF full-length MRC5 0.0842105 5310 5312 chrX 138778307 138784350 chrX:138778307-138784350:+:L1PA3:REF 12 + L1PA3 REF full-length FGF13 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.338252 0.438057 0.580606 0.588235 0.501912 0.433375 0.106227 0.56487 0.616999 0.535424 0.562077 0.597623 5311 5313 chrX 138996063 139000000 chrX:138996063-139000000:+:L1P2:REF 1 + L1P2 REF 3prime-truncated FGF13 MRC5 0.5 5312 5314 chrX 139259549 139265701 chrX:139259549-139265701:+:L1PA5:REF 12 + L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.895397 0.334204 0.344 0.445338 0.0813397 0.13615 0.0883281 0.704545 0.118577 0.350211 0.284418 0.888889 5313 5315 chrX 139989004 139995163 chrX:139989004-139995163:-:L1PA3:REF 11 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.818942 0.452174 0.872 0.858716 0.742481 0.31383 0.037037 0.873684 0.897059 0.785455 0.861635 5314 5316 chrX 140000618 140002873 chrX:140000618-140002873:+:L1P3:REF 11 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.853503 0.0930233 0.3 0.229381 0.276316 0.125 0.00862069 0.75 0.483516 0.438356 0.482412 5315 5317 chrX 140632924 140639082 chrX:140632924-140639082:+:L1PA6:REF 12 + L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.879032 0.00877193 0.638554 0.697531 0.122995 0.0 0.0 0.197368 0.0333333 0.633803 0.487923 0.885714 5316 5318 chrX 141044310 141050237 chrX:141044310-141050237:+:L1PA5:REF 8 + L1PA5 REF full-length HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,IMR90,HEK293 0.0751295 0.408451 0.651515 0.178962 0.109827 0.0 0.306667 0.185239 5317 5319 chrX 141421202 141427246 chrX:141421202-141427246:-:L1HS:REF 4 - L1HS REF full-length HEK293T,K562,MCF7,HEK293 0.579905 0.0255319 0.596939 0.766667 MacFarlane_2013:170.0 MacFarlane_2013:5,Rodriguez-Martin_2020:0,Tubio_2014:1 5318 5320 chrX 141537173 141543099 chrX:141537173-141543099:-:L1PA5:REF 2 - L1PA5 REF full-length SPANXA2-OT1 BJ,MRC5 0.511364 0.658307 5319 5321 chrX 141996539 141996764 chrX:141996539-141996764:-:L1P3:REF 5 - L1P3 REF 3prime-truncated HepG2,MRC5,HEK293T,K562,HEK293 0.123288 0.257271 0.310345 0.0851064 0.304878 5320 5322 chrX 142338123 142344150 chrX:142338123-142344150:+:L1PA2:REF 12 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.700321 0.486179 0.793581 0.625455 0.497843 0.812766 0.0148075 0.939469 0.97669 0.699643 0.787736 0.957746 5321 5323 chrX 142385590 142391622 chrX:142385590-142391622:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0725869 0.685172 0.79123 0.742046 0.620841 0.8132 0.076564 0.901728 0.961362 0.714724 0.755789 0.910387 5322 5324 chrX 142477849 142483853 chrX:142477849-142483853:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.261011 0.807547 0.879824 0.886762 0.616568 0.871252 0.0102506 0.947598 0.911765 0.74697 0.808469 0.974138 Brouha_2003:0.1 5323 5325 chrX 142769944 142771233 chrX:142769944-142771233:-:L1PA7:REF 2 - L1PA7 REF 3prime-truncated MRC5,HEK293 0.4375 0.166667 5324 5326 chrX 146118862 146123734 chrX:146118862-146123734:+:L1PA6:REF 12 + L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.916996 0.644068 0.453608 0.643162 0.0225564 0.209581 0.0 0.0757576 0.22449 0.654088 0.27789 0.8 5325 5327 chrX 146227925 146234095 chrX:146227925-146234095:-:L1PA6:REF 12 - L1PA6 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.79397 0.166667 0.413043 0.430921 0.144304 0.0571429 0.0147059 0.230769 0.111111 0.379888 0.424299 0.753846 5326 5328 chrX 147142048 147148161 chrX:147142048-147148161:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.867526 0.343173 0.626649 0.638449 0.141104 0.132075 0.014658 0.0120482 0.694643 0.653731 0.309045 0.94902 5327 5329 chrX 147653734 147659767 chrX:147653734-147659767:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0973783 0.627298 0.63311 0.831029 0.664753 0.722453 0.0399023 0.667461 0.904762 0.748428 0.779318 0.774451 Gardner_2017:1 5328 5330 chrX 148123449 148129475 chrX:148123449-148129475:-:L1PA3:REF 12 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.0936314 0.909856 0.837596 0.824497 0.357522 0.769946 0.0265781 0.87536 0.932773 0.72154 0.695427 0.914197 5329 5331 chrX 148346941 148353036 chrX:148346941-148353036:-:L1PA5:REF 12 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.824324 0.146371 0.666214 0.699037 0.426807 0.135397 0.0096463 0.131148 0.717011 0.665595 0.616293 0.93736 5330 5332 chrX 148775864 148782141 chrX:148775864-148782141:-:L1PA7:REF 12 - L1PA7 REF full-length AFF2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.870968 0.0294118 0.652406 0.278049 0.422604 0.0384615 0.00444444 0.26 0.517241 0.375 0.486742 0.894737 5331 5333 chrX 149178166 149184185 chrX:149178166-149184185:-:L1HS:REF 11 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,IMR90,HEK293,H1 0.128933 0.739059 0.742806 0.713722 0.67461 0.49829 0.0120361 0.8 0.625 0.82501 0.510204 5332 5334 chrX 149334009 149340027 chrX:149334009-149340027:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.631491 0.763441 0.827434 0.729885 0.699029 0.592814 0.00516351 0.885333 0.829746 0.670792 0.791219 0.91 5333 5335 chrX 149435837 149441830 chrX:149435837-149441830:+:L1PA3:REF 8 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HCT116,HEK293,H1 0.511962 0.595506 0.752577 0.7125 0.429467 0.801527 0.679245 0.971014 5334 5336 chrX 150417926 150421451 chrX:150417926-150421451:-:L1PA2:REF 11 - L1PA2 REF 3prime-truncated MAMLD1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.157658 0.935897 0.971228 0.984615 0.836168 0.969602 0.144578 0.749299 0.981036 0.833068 0.809035 5335 5337 chrX 151040085 151041572 chrX:151040085-151041572:-:L1P2:REF 4 - L1P2 REF 3prime-truncated HEK293T,K562,IMR90,HEK293 0.366597 0.324484 0.55615 0.417017 5336 5338 chrX 151330320 151336351 chrX:151330320-151336351:+:L1HS:REF 12 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.307692 0.740484 0.725681 0.707683 0.514208 0.550676 0.0151351 0.60442 0.868735 0.703057 0.728505 0.917112 5337 5339 chrX 152235997 152242028 chrX:152235997-152242028:-:L1PA2:REF 12 - L1PA2 REF full-length GABRA3 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.313707 0.410236 0.700593 0.735325 0.528973 0.966276 0.898895 0.584722 0.778161 0.708791 0.740242 0.901449 5338 5340 chrX 152289516 152295834 chrX:152289516-152295834:-:L1PA6:REF 5 - L1PA6 REF full-length GABRA3 2102Ep,HepG2,MRC5,HEK293T,HEK293 0.957143 0.043956 0.172 0.0119048 0.101064 5339 5341 chrX 152544525 152550550 chrX:152544525-152550550:+:L1PA2:REF 11 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.891395 0.658458 0.746914 0.825822 0.714012 0.852941 0.650376 0.866538 0.752914 0.814529 0.87541 5340 5342 chrX 152581914 152588056 chrX:152581914-152588056:+:L1PA4:REF 12 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.843478 0.357045 0.624642 0.651229 0.28 0.776549 0.683007 0.195789 0.588129 0.712375 0.595049 0.885057 5341 5343 chrX 152610420 152612729 chrX:152610420-152612729:-:L1PA6:REF 12 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.495957 0.485597 0.596667 0.644444 0.189781 0.562162 0.883333 0.833333 0.719403 0.634921 0.609974 0.896825 5342 5344 chrX 152835297 152841440 chrX:152835297-152841440:-:L1PA6:REF 11 - L1PA6 REF full-length NSDHL 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293 0.907834 0.948454 0.839286 0.96728 0.806723 0.97479 0.921875 0.956835 0.981366 0.792627 0.690722 5343 5345 chrX 155162775 155163333 chrX:155162775-155163333:-:L1PA4:REF 12 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.856899 0.323741 0.715134 0.826923 0.517157 0.539267 0.658291 0.920308 0.979221 0.705722 0.547945 0.956044 5344 5346 chrX 155197626 155203769 chrX:155197626-155203769:+:L1PA3:REF 12 + L1PA3 REF full-length VBP1 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.879026 0.804075 0.64086 0.782005 0.652938 0.695489 0.476337 0.925884 0.955115 0.658936 0.558932 0.914089 5345 5347 chrX 155299575 155305601 chrX:155299575-155305601:-:L1PA2:REF 12 - L1PA2 REF full-length CLIC2 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.325548 0.894958 0.818143 0.932311 0.771245 0.71931 0.97748 0.970278 0.971292 0.74284 0.797985 0.935415 5346 5348 chrX 155421974 155428112 chrX:155421974-155428112:+:L1PA3:REF 12 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.864693 0.927152 0.852008 0.963801 0.669617 0.799353 0.608355 0.946644 0.984479 0.804878 0.618537 0.962963 5347 5349 chrX 155516016 155522048 chrX:155516016-155522048:-:L1HS:REF 12 - L1HS REF full-length TMLHE 2102Ep,HepG2,BJ,MRC5,HEK293T,HeLaS3,K562,MCF7,HCT116,IMR90,HEK293,H1 0.195801 0.987697 0.978004 0.98156 0.903939 0.97927 0.967444 0.977068 0.976093 0.835737 0.887709 0.959406 Brouha_2003:0.0 5348 5350 chrX 155567853 155573980 chrX:155567853-155573980:+:L1PA3:REF 4 + L1PA3 REF full-length TMLHE HEK293T,HeLaS3,IMR90,HEK293 0.946469 0.97482 0.648936 0.965695 5349 5351 chrX 155655706 155658058 chrX:155655706-155658058:-:L1P3:REF 10 - L1P3 REF 3prime-truncated SPRY3 2102Ep,HepG2,BJ,MRC5,HEK293T,K562,MCF7,HCT116,IMR90,HEK293 0.509434 0.454545 0.409091 0.462963 0.549296 0.21875 0.5 0.466667 0.395833 0.453704 5350 5352 chrY 3443550 3449565 chrY:3443550-3449565:+:L1HS:REF 5 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.609195 0.840391 0.792892 0.85736 0.951553 5351 5353 chrY 4948913 4954938 chrY:4948913-4954938:-:L1HS:REF 5 - L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.3875 0.767442 0.814607 0.710806 0.939394 5352 5354 chrY 4973238 4979397 chrY:4973238-4979397:+:L1PA3:REF 4 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5 0.72807 0.348718 0.607143 0.583267 5353 5355 chrY 5041086 5047139 chrY:5041086-5047139:-:L1PA3:REF 5 - L1PA3 REF full-length PCDH11Y 2102Ep,HepG2,BJ,MRC5,H1 0.228444 0.819129 0.800275 0.872798 0.944858 5354 5356 chrY 5606144 5612199 chrY:5606144-5612199:-:L1HS:REF 5 - L1HS REF full-length PCDH11Y 2102Ep,HepG2,BJ,MRC5,H1 0.415721 0.719692 0.786402 0.828684 0.969784 Brouha_2003:0.0 5355 5357 chrY 5998661 5999485 chrY:5998661-5999485:+:L1P3:REF 5 + L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,H1 0.72043 0.00934579 0.0625 0.0520833 0.764706 5356 5358 chrY 6626784 6632798 chrY:6626784-6632798:+:L1PA3:REF 7 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,HEK293T,HEK293,H1 0.874007 0.346847 0.551515 0.713921 0.464286 0.530909 0.911374 5357 5359 chrY 6852433 6858448 chrY:6852433-6858448:+:L1PA3:REF 5 + L1PA3 REF full-length AMELY 2102Ep,HepG2,BJ,MRC5,H1 0.919431 0.735182 0.733333 0.724725 0.926471 5358 5360 chrY 7154111 7160133 chrY:7154111-7160133:-:L1PA2:REF 5 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.443936 0.925566 0.807322 0.834277 0.89505 5359 5361 chrY 7249559 7255517 chrY:7249559-7255517:-:L1PA2:REF 5 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.459016 0.731132 0.68408 0.740541 0.694444 5360 5362 chrY 7428008 7433810 chrY:7428008-7433810:+:L1PA5:REF 3 + L1PA5 REF full-length 2102Ep,HepG2,MRC5 0.945455 0.871429 0.982456 5361 5363 chrY 7570056 7576073 chrY:7570056-7576073:-:L1PA3:REF 1 - L1PA3 REF full-length MRC5 0.951613 5362 5364 chrY 7705151 7711267 chrY:7705151-7711267:-:L1PA4:REF 3 - L1PA4 REF full-length TTTY16 HepG2,BJ,MRC5 0.0555556 0.944444 0.945455 5363 5365 chrY 8134318 8140335 chrY:8134318-8140335:-:L1PA2:REF 1 - L1PA2 REF full-length MRC5 0.819728 5364 5366 chrY 8943046 8949182 chrY:8943046-8949182:-:L1PA5:REF 5 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.775281 0.123077 0.327103 0.102804 0.694915 5365 5367 chrY 9589714 9590560 chrY:9589714-9590560:+:L1PA3:REF 5 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,H1 0.338174 0.790262 0.661243 0.636231 0.921409 5366 5368 chrY 9941130 9947151 chrY:9941130-9947151:+:L1HS:REF 5 + L1HS REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.71547 0.737316 0.616007 0.762121 0.900538 5367 5369 chrY 9961614 9967750 chrY:9961614-9967750:-:L1PA3:REF 5 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.875723 0.730643 0.693566 0.72229 0.863636 5368 5370 chrY 11856619 11861094 chrY:11856619-11861094:-:L1HS:REF 2 - L1HS REF 3prime-truncated HepG2,MRC5 0.380952 0.319149 5369 5371 chrY 11992980 11994466 chrY:11992980-11994466:-:L1PA2:REF 5 - L1PA2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,H1 0.753807 0.758929 0.630705 0.709865 0.828947 5370 5372 chrY 12985911 12992021 chrY:12985911-12992021:-:L1PA4:REF 5 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.859396 0.546135 0.582781 0.513665 0.876897 5371 5373 chrY 13130498 13136521 chrY:13130498-13136521:-:L1PA3:REF 2 - L1PA3 REF full-length BJ,MRC5 0.792593 0.734568 5372 5374 chrY 13186045 13189678 chrY:13186045-13189678:+:L1P2:REF 1 + L1P2 REF 3prime-truncated MRC5 0.77193 5373 5375 chrY 13524018 13530054 chrY:13524018-13530054:+:L1PA3:REF 5 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.900259 0.45122 0.701681 0.754589 0.920405 5374 5376 chrY 13559272 13565292 chrY:13559272-13565292:-:L1PA2:REF 5 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.380753 0.778443 0.738931 0.776076 0.917582 5375 5377 chrY 13570712 13571198 chrY:13570712-13571198:+:L1P1:REF 5 + L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,H1 0.88547 0.410938 0.450637 0.435577 0.878788 5376 5378 chrY 13680504 13682057 chrY:13680504-13682057:+:L1PA8:REF 5 + L1PA8 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,H1 0.781818 0.0042735 0.341991 0.203579 0.88 5377 5379 chrY 13691338 13697314 chrY:13691338-13697314:+:L1PA3:REF 3 + L1PA3 REF full-length TMSB4Y 2102Ep,HepG2,MRC5 0.77551 0.2 0.530435 5378 5380 chrY 13721945 13728094 chrY:13721945-13728094:+:L1PA4:REF 5 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.875421 0.138996 0.717391 0.656579 0.909722 5379 5381 chrY 13740720 13746742 chrY:13740720-13746742:-:L1PA3:REF 5 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.889693 0.590969 0.8 0.72886 0.981132 5380 5382 chrY 13770703 13776733 chrY:13770703-13776733:-:L1PA2:REF 5 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,HCT116 0.871287 0.780899 0.828283 0.753623 0.682243 5381 5383 chrY 13909274 13915419 chrY:13909274-13915419:+:L1PA3:REF 4 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5 0.8 0.0238095 0.177778 0.0914634 5382 5384 chrY 13971988 13972682 chrY:13971988-13972682:-:L1PA3:REF 5 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,H1 0.612903 0.0211946 0.584 0.507955 0.93125 5383 5385 chrY 14024193 14030198 chrY:14024193-14030198:-:L1PA2:REF 4 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5 0.654255 0.54065 0.611765 0.699153 5384 5386 chrY 14386183 14392046 chrY:14386183-14392046:-:L1PA3:REF 5 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,H1 0.893709 0.018847 0.492157 0.604988 0.91498 5385 5387 chrY 14570605 14576724 chrY:14570605-14576724:-:L1PA4:REF 4 - L1PA4 REF full-length NLGN4Y 2102Ep,HepG2,BJ,MRC5 0.882759 0.987234 0.962963 0.986038 5386 5388 chrY 14833585 14833877 chrY:14833585-14833877:-:L1P1:REF 5 - L1P1 REF 3prime-truncated NLGN4Y 2102Ep,HepG2,BJ,MRC5,H1 0.927978 0.962963 0.956731 0.975435 0.917241 5387 5389 chrY 14861128 14867059 chrY:14861128-14867059:+:L1PA3:REF 5 + L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,H1 0.901532 0.0297619 0.801562 0.909971 0.969072 5388 5390 chrY 14952755 14958959 chrY:14952755-14958959:+:L1PA3:REF 5 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.910798 0.250689 0.550459 0.631336 0.911504 5389 5391 chrY 15153009 15159054 chrY:15153009-15159054:-:L1PA3:REF 5 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.903226 0.898438 0.514019 0.742268 0.933333 5390 5392 chrY 15426061 15432072 chrY:15426061-15432072:+:L1PA3:REF 5 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.913545 0.891068 0.982278 0.978947 0.920354 5391 5393 chrY 15530102 15532391 chrY:15530102-15532391:-:L1PA6:REF 4 - L1PA6 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5 0.877778 0.0434783 0.898551 0.95098 5392 5394 chrY 15722321 15728344 chrY:15722321-15728344:-:L1PA3:REF 5 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.878788 0.0336538 0.628931 0.782278 0.95 5393 5395 chrY 15742349 15748477 chrY:15742349-15748477:-:L1PA5:REF 5 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.882353 0.182692 0.294118 0.88764 0.76 5394 5396 chrY 16217866 16224003 chrY:16217866-16224003:-:L1PA4:REF 2 - L1PA4 REF full-length HepG2,MRC5 0.586538 0.578231 5395 5397 chrY 16427017 16433089 chrY:16427017-16433089:+:L1PA3:REF 5 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.750842 0.0178571 0.197368 0.246495 0.879397 5396 5398 chrY 16747134 16753486 chrY:16747134-16753486:-:L1PA7:REF 5 - L1PA7 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.702381 0.295181 0.357466 0.216758 0.888889 5397 5399 chrY 16901804 16907770 chrY:16901804-16907770:+:L1PA3:REF 1 + L1PA3 REF full-length MRC5 0.535714 5398 5400 chrY 16985042 16991073 chrY:16985042-16991073:+:L1PA3:REF 5 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.80402 0.0916031 0.490476 0.571429 0.932886 5399 5401 chrY 17060920 17066963 chrY:17060920-17066963:-:L1PA2:REF 5 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.199396 0.658416 0.752137 0.928062 0.953488 5400 5402 chrY 17311632 17317724 chrY:17311632-17317724:+:L1PA4:REF 5 + L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.75 0.0243902 0.264706 0.779661 0.8125 5401 5403 chrY 17708355 17714504 chrY:17708355-17714504:+:L1PA3:REF 5 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.725888 0.15873 0.485232 0.510557 0.688889 5402 5404 chrY 18191509 18197658 chrY:18191509-18197658:-:L1PA3:REF 4 - L1PA3 REF full-length 2102Ep,HepG2,MRC5,H1 0.675393 0.167702 0.487805 0.717949 5403 5405 chrY 18893898 18899933 chrY:18893898-18899933:+:L1PA3:REF 5 + L1PA3 REF full-length TTTY14 2102Ep,HepG2,BJ,MRC5,H1 0.903729 0.814629 0.972239 0.972274 0.881232 5404 5406 chrY 19034631 19038436 chrY:19034631-19038436:+:L1HS:REF 5 + L1HS REF 3prime-truncated TTTY14 2102Ep,HepG2,BJ,MRC5,H1 0.791432 0.709517 0.800651 0.363499 0.1469 5405 5407 chrY 19230409 19232952 chrY:19230409-19232952:-:L1P1:REF 5 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,H1 0.840909 0.0 0.234375 0.320261 0.76 5406 5408 chrY 19373283 19379312 chrY:19373283-19379312:-:L1PA2:REF 4 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5 0.135135 0.939597 0.725888 0.810298 5407 5409 chrY 19413656 19419018 chrY:19413656-19419018:-:L1PA3:REF 5 - L1PA3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,H1 0.922515 0.501821 0.631111 0.663216 0.886824 5408 5410 chrY 19631690 19635004 chrY:19631690-19635004:-:L1P1:REF 5 - L1P1 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,H1 0.649254 0.447368 0.153846 0.353116 0.447761 5409 5411 chrY 19750332 19754110 chrY:19750332-19754110:-:L1PA12:REF 5 - L1PA12 REF 3prime-truncated KDM5D 2102Ep,HepG2,BJ,MRC5,H1 0.820896 0.0909091 0.857627 0.869737 0.890511 5410 5412 chrY 20030942 20037076 chrY:20030942-20037076:+:L1PA3:REF 5 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.717593 0.723192 0.529605 0.281538 0.830882 5411 5413 chrY 20042979 20043855 chrY:20042979-20043855:-:L1P3:REF 5 - L1P3 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,H1 0.54 0.376238 0.330935 0.0734463 0.838235 5412 5414 chrY 20367992 20374018 chrY:20367992-20374018:+:L1PA2:REF 2 + L1PA2 REF full-length MRC5,H1 0.807339 0.818966 5413 5415 chrY 20380425 20386697 chrY:20380425-20386697:-:L1PA3:REF 5 - L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.679245 0.495413 0.338521 0.215278 0.620915 5414 5416 chrY 20457288 20463400 chrY:20457288-20463400:-:L1PA5:REF 5 - L1PA5 REF full-length TTTY10 2102Ep,HepG2,BJ,MRC5,H1 0.727273 0.491935 0.5 0.409722 0.545455 5415 5417 chrY 20817541 20818479 chrY:20817541-20818479:+:L1P2:REF 5 + L1P2 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,H1 0.740741 0.0 0.108108 0.136 0.5 5416 5418 chrY 20822282 20827017 chrY:20822282-20827017:-:L1PA4:REF 1 - L1PA4 REF 3prime-truncated BJ 0.72619 5417 5419 chrY 20843711 20848827 chrY:20843711-20848827:-:L1PA7:REF 5 - L1PA7 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,H1 0.818792 0.00675676 0.213592 0.292135 0.497059 5418 5420 chrY 20867003 20868297 chrY:20867003-20868297:-:L1PA4:REF 5 - L1PA4 REF 3prime-truncated 2102Ep,HepG2,BJ,MRC5,H1 0.369048 0.0 0.0 0.00727273 0.0576923 5419 5421 chrY 20919912 20926008 chrY:20919912-20926008:-:L1PA4:REF 5 - L1PA4 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.571429 0.0 0.351351 0.491935 0.617021 5420 5422 chrY 20944133 20950163 chrY:20944133-20950163:-:L1PA2:REF 5 - L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.819892 0.425957 0.41033 0.471716 0.777778 5421 5423 chrY 21063741 21069758 chrY:21063741-21069758:+:L1PA2:REF 5 + L1PA2 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.811224 0.231013 0.336957 0.120773 0.653846 5422 5424 chrY 21123535 21129642 chrY:21123535-21129642:-:L1PA5:REF 5 - L1PA5 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.61745 0.0049505 0.189655 0.194767 0.488372 5423 5425 chrY 22339612 22345645 chrY:22339612-22345645:-:L1PA2:REF 5 - L1PA2 REF full-length RBMY1F 2102Ep,HepG2,BJ,MRC5,H1 0.629571 0.710554 0.820698 0.810028 0.888545 5424 5426 chrY 26601787 26607911 chrY:26601787-26607911:+:L1PA3:REF 5 + L1PA3 REF full-length 2102Ep,HepG2,BJ,MRC5,H1 0.75 0.0 0.280702 0.0769231 0.296296 5425