Methylation of L1HS elements found in H1 (both full-length and 3'-truncated)
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Amplicon order
Drag the amplicon names up or down to reorder their display.
↕ chr1:34566055-34572105:-:L1HS:REF
↕ chr1:67078891-67084915:-:L1HS:REF
↕ chr1:68736693-68740136:-:L1HS:REF
↕ chr1:77000000-77005515:-:L1HS:REF
↕ chr1:80939203-80945257:-:L1HS:REF
↕ chr1:85748519-85754548:+:L1HS:REF
↕ chr1:85927067-85933100:+:L1HS:REF
↕ chr1:86679080-86685111:-:L1HS:REF
↕ chr1:104770247-104776278:-:L1HS:REF
↕ chr1:104843833-104849864:-:L1HS:REF
↕ chr1:113497220-113500000:+:L1HS:REF
↕ chr1:118852351-118858380:+:L1HS:REF
↕ chr1:121532230-121538261:-:L1HS:REF
↕ chr1:146717192-146723218:-:L1HS:REF
↕ chr1:166243053-166249084:-:L1HS:REF
↕ chr1:174590323-174596379:-:L1HS:REF
↕ chr1:179606225-179606227:-:L1HS:NONREF
↕ chr1:180866811-180872843:-:L1HS:REF
↕ chr1:187343764-187349794:-:L1HS:REF
↕ chr1:187597671-187603699:+:L1HS:REF
↕ chr1:193717837-193723892:-:L1HS:REF
↕ chr1:196219370-196225402:-:L1HS:REF
↕ chr1:197707714-197713746:+:L1HS:REF
↕ chr1:197802331-197803141:+:L1HS:REF
↕ chr1:209913771-209919823:-:L1HS:REF
↕ chr1:220245155-220246008:+:L1HS:REF
↕ chr1:237019467-237025494:-:L1HS:REF
↕ chr1:237075264-237081293:+:L1HS:REF
↕ chr1:239623498-239629523:-:L1HS:REF
↕ chr1:242148274-242148276:+:L1HS:NONREF
↕ chr2:11000000-11002136:-:L1HS:REF
↕ chr2:16593725-16599758:-:L1HS:REF
↕ chr2:36112506-36118537:-:L1HS:REF
↕ chr2:36343098-36343100:-:L1HS:NONREF
↕ chr2:41686503-41686505:-:L1HS:NONREF
↕ chr2:71411474-71417501:-:L1HS:REF
↕ chr2:81870918-81870920:+:L1HS:NONREF
↕ chr2:86655238-86661268:-:L1HS:REF
↕ chr2:102566355-102572385:-:L1HS:REF
↕ chr2:112503812-112509845:-:L1HS:REF
↕ chr2:126178048-126184064:-:L1HS:REF
↕ chr2:129415687-129417400:-:L1HS:REF
↕ chr2:129685897-129687022:-:L1HS:REF
↕ chr2:143860956-143866987:+:L1HS:REF
↕ chr2:148188745-148194773:+:L1HS:REF
↕ chr2:153007766-153013796:-:L1HS:REF
↕ chr2:155671335-155671337:+:L1HS:NONREF
↕ chr2:157566353-157572377:+:L1HS:REF
↕ chr2:166988454-166994509:+:L1HS:REF
↕ chr2:169248623-169254656:+:L1HS:REF
↕ chr2:172315270-172321297:+:L1HS:REF
↕ chr2:177973073-177979090:+:L1HS:REF
↕ chr2:180833661-180839689:-:L1HS:REF
↕ chr2:193170704-193171720:+:L1HS:REF
↕ chr2:193212420-193218448:-:L1HS:REF
↕ chr2:196905587-196911636:+:L1HS:REF
↕ chr2:220413500-220413502:-:L1HS:NONREF
↕ chr2:229476842-229476844:+:L1HS:NONREF
↕ chr2:230337069-230342513:-:L1HS:REF
↕ chr2:232149196-232155229:-:L1HS:REF
↕ chr3:3963076-3969110:+:L1HS:REF
↕ chr3:4916534-4922591:+:L1HS:REF
↕ chr3:11488672-11492490:-:L1HS:REF
↕ chr3:17858274-17861391:-:L1HS:REF
↕ chr3:18516080-18520244:+:L1HS:REF
↕ chr3:26036528-26042769:-:L1HS:REF
↕ chr3:26398017-26404045:-:L1HS:REF
↕ chr3:29108111-29112113:-:L1HS:REF
↕ chr3:35454617-35458296:+:L1HS:REF
↕ chr3:38584590-38584592:+:L1HS:NONREF
↕ chr3:46783105-46789138:-:L1HS:REF
↕ chr3:54394322-54400323:-:L1HS:REF
↕ chr3:77763677-77769678:-:L1HS:REF
↕ chr3:80541011-80541013:-:L1HS:NONREF
↕ chr3:82337499-82339442:+:L1HS:REF
↕ chr3:85527417-85527419:+:L1HS:NONREF
↕ chr3:89460825-89466856:-:L1HS:REF
↕ chr3:90169567-90175598:-:L1HS:REF
↕ chr3:103556537-103562569:-:L1HS:REF
↕ chr3:108749400-108755425:+:L1HS:REF
↕ chr3:109199872-109205903:+:L1HS:REF
↕ chr3:110888814-110890548:+:L1HS:REF
↕ chr3:116359999-116366026:+:L1HS:REF
↕ chr3:120573021-120579186:+:L1HS:REF
↕ chr3:123871878-123871880:+:L1HS:NONREF
↕ chr3:132946006-132952034:-:L1HS:REF
↕ chr3:136479056-136485103:-:L1HS:REF
↕ chr3:136963693-136969736:-:L1HS:REF
↕ chr3:139590956-139596035:+:L1HS:REF
↕ chr3:151970297-151970299:-:L1HS:NONREF
↕ chr3:158019676-158025704:+:L1HS:REF
↕ chr3:159095379-159101394:-:L1HS:REF
↕ chr3:163236941-163242962:+:L1HS:REF
↕ chr3:164291525-164296426:+:L1HS:REF
↕ chr3:190964647-190965526:-:L1HS:REF
↕ chr4:14755114-14761144:+:L1HS:REF
↕ chr4:15841546-15847572:+:L1HS:REF
↕ chr4:16942776-16944630:+:L1HS:REF
↕ chr4:23614771-23620793:+:L1HS:REF
↕ chr4:48051954-48057974:-:L1HS:REF
↕ chr4:52538471-52544498:+:L1HS:REF
↕ chr4:52816456-52822486:+:L1HS:REF
↕ chr4:57562316-57568347:-:L1HS:REF
↕ chr4:59078847-59084877:+:L1HS:REF
↕ chr4:61939927-61945962:-:L1HS:REF
↕ chr4:62726948-62732969:-:L1HS:REF
↕ chr4:69664009-69667565:+:L1HS:REF
↕ chr4:70015396-70019676:-:L1HS:REF
↕ chr4:74717539-74723587:-:L1HS:REF
↕ chr4:78105735-78111765:+:L1HS:REF
↕ chr4:79704552-79710581:+:L1HS:REF
↕ chr4:79937715-79943746:+:L1HS:REF
↕ chr4:79966907-79972933:+:L1HS:REF
↕ chr4:87347103-87353146:-:L1HS:REF
↕ chr4:91437491-91443691:+:L1HS:REF
↕ chr4:91978211-91984413:+:L1HS:REF
↕ chr4:93608283-93614338:-:L1HS:REF
↕ chr4:93638307-93644337:-:L1HS:REF
↕ chr4:98592435-98598463:-:L1HS:REF
↕ chr4:106571057-106577070:-:L1HS:REF
↕ chr4:110690112-110693684:-:L1HS:REF
↕ chr4:111894801-111900831:+:L1HS:REF
↕ chr4:119948726-119954758:-:L1HS:REF
↕ chr4:135178140-135183747:-:L1HS:REF
↕ chr4:136293494-136299546:-:L1HS:REF
↕ chr4:137496278-137500000:+:L1HS:REF
↕ chr4:144809658-144810951:+:L1HS:REF
↕ chr4:166449405-166449678:-:L1HS:REF
↕ chr4:166569976-166576007:+:L1HS:REF
↕ chr4:166850455-166851634:+:L1HS:REF
↕ chr4:169515501-169521532:-:L1HS:REF
↕ chr4:189137085-189143104:+:L1HS:REF
↕ chr5:4500001-4502372:-:L1HS:REF
↕ chr5:13416497-13422525:+:L1HS:REF
↕ chr5:15906515-15912550:-:L1HS:REF
↕ chr5:21207622-21207624:+:L1HS:NONREF
↕ chr5:34147845-34154031:+:L1HS:REF
↕ chr5:52086499-52088220:-:L1HS:REF
↕ chr5:66750283-66754219:+:L1HS:REF
↕ chr5:79778884-79784938:-:L1HS:REF
↕ chr5:81616090-81622140:+:L1HS:REF
↕ chr5:86510690-86516743:+:L1HS:REF
↕ chr5:90154963-90154965:+:L1HS:NONREF
↕ chr5:102131356-102137385:+:L1HS:REF
↕ chr5:102189483-102194435:+:L1HS:REF
↕ chr5:104518587-104524616:+:L1HS:REF
↕ chr5:105513236-105519274:-:L1HS:REF
↕ chr5:109259387-109265418:+:L1HS:REF
↕ chr5:111302238-111308262:+:L1HS:REF
↕ chr5:116113364-116113366:-:L1HS:NONREF
↕ chr5:119684785-119690814:-:L1HS:REF
↕ chr5:133583288-133589299:+:L1HS:REF
↕ chr5:146609485-146615534:+:L1HS:REF
↕ chr5:152886441-152892473:-:L1HS:REF
↕ chr5:153070982-153077008:-:L1HS:REF
↕ chr5:156061919-156067966:-:L1HS:REF
↕ chr5:160709608-160715639:-:L1HS:REF
↕ chr5:162530742-162531677:-:L1HS:REF
↕ chr5:165068136-165068138:-:L1HS:NONREF
↕ chr5:166141191-166145692:-:L1HS:REF
↕ chr5:166966760-166972815:-:L1HS:REF
↕ chr5:173402796-173408828:-:L1HS:REF
↕ chr5:177772245-177778274:+:L1HS:REF
↕ chr6:2417774-2423803:-:L1HS:REF
↕ chr6:13190800-13190802:+:L1HS:NONREF
↕ chr6:13502816-13502818:+:L1HS:NONREF
↕ chr6:51874783-51880802:+:L1HS:REF
↕ chr6:62658301-62658303:+:L1HS:NONREF
↕ chr6:69495362-69500000:+:L1HS:REF
↕ chr6:70010347-70016552:+:L1HS:REF
↕ chr6:72988654-72994686:-:L1HS:REF
↕ chr6:76875759-76877075:-:L1HS:REF
↕ chr6:83333952-83339981:+:L1HS:REF
↕ chr6:93865738-93871783:-:L1HS:REF
↕ chr6:94197995-94204060:-:L1HS:REF
↕ chr6:98703059-98708329:+:L1HS:REF
↕ chr6:112703745-112709778:+:L1HS:REF
↕ chr6:117102131-117108163:+:L1HS:REF
↕ chr6:121162716-121168725:+:L1HS:REF
↕ chr6:128998385-129000000:+:L1HS:REF
↕ chr6:133020691-133026746:-:L1HS:REF
↕ chr6:156034135-156040165:+:L1HS:REF
↕ chr6:156324980-156331010:-:L1HS:REF
↕ chr6:157547703-157547705:-:L1HS:NONREF
↕ chr7:7465092-7471120:+:L1HS:REF
↕ chr7:8351723-8353975:+:L1HS:REF
↕ chr7:12497211-12500000:+:L1HS:REF
↕ chr7:25041860-25047891:-:L1HS:REF
↕ chr7:30439242-30445274:+:L1HS:REF
↕ chr7:49680245-49686300:-:L1HS:REF
↕ chr7:57539590-57540834:+:L1HS:REF
↕ chr7:63148831-63154859:-:L1HS:REF
↕ chr7:66286853-66292884:-:L1HS:REF
↕ chr7:70197328-70203357:+:L1HS:REF
↕ chr7:97613656-97619688:+:L1HS:REF
↕ chr7:108188818-108188820:+:L1HS:NONREF
↕ chr7:110707004-110713024:-:L1HS:REF
↕ chr7:111243515-111249546:-:L1HS:REF
↕ chr7:111963193-111969223:+:L1HS:REF
↕ chr7:125179570-125181978:-:L1HS:REF
↕ chr7:141062014-141068042:-:L1HS:REF
↕ chr7:141920659-141926712:-:L1HS:REF
↕ chr7:147842591-147848623:-:L1HS:REF
↕ chr7:150597094-150602628:+:L1HS:REF
↕ chr8:8470859-8476906:+:L1HS:REF
↕ chr8:27113618-27119645:+:L1HS:REF
↕ chr8:71486984-71486986:-:L1HS:NONREF
↕ chr8:75621331-75627355:-:L1HS:REF
↕ chr8:88685705-88691760:+:L1HS:REF
↕ chr8:91522091-91528121:-:L1HS:REF
↕ chr8:104739851-104745873:-:L1HS:REF
↕ chr8:121329878-121334807:-:L1HS:REF
↕ chr8:127311575-127315431:+:L1HS:REF
↕ chr8:135875862-135881890:+:L1HS:REF
↕ chr8:136438074-136444105:-:L1HS:REF
↕ chr9:5491417-5491419:+:L1HS:NONREF
↕ chr9:20655632-20658802:-:L1HS:REF
↕ chr9:28111895-28117865:-:L1HS:REF
↕ chr9:63913382-63916426:+:L1HS:REF
↕ chr9:83049539-83055571:-:L1HS:REF
↕ chr9:90149604-90155634:+:L1HS:REF
↕ chr9:94113535-94119565:-:L1HS:REF
↕ chr9:95697585-95703604:+:L1HS:REF
↕ chr9:99498741-99500000:+:L1HS:REF
↕ chr9:103237485-103241471:+:L1HS:REF
↕ chr9:110417102-110423126:+:L1HS:REF
↕ chr9:110791097-110797129:+:L1HS:REF
↕ chr9:112798107-112804159:-:L1HS:REF
↕ chr10:5245354-5251383:+:L1HS:REF
↕ chr10:6369617-6375667:-:L1HS:REF
↕ chr10:19088601-19094618:-:L1HS:REF
↕ chr10:25418756-25418758:-:L1HS:NONREF
↕ chr10:33510845-33516876:-:L1HS:REF
↕ chr10:37995443-38000000:+:L1HS:REF
↕ chr10:67189566-67189568:+:L1HS:NONREF
↕ chr10:81441665-81441975:-:L1HS:REF
↕ chr10:85355506-85361538:+:L1HS:REF
↕ chr10:98782941-98788971:-:L1HS:REF
↕ chr10:105377346-105383377:-:L1HS:REF
↕ chr10:105775520-105781551:-:L1HS:REF
↕ chr10:108310130-108316139:-:L1HS:REF
↕ chr10:122695714-122695716:+:L1HS:NONREF
↕ chr11:5914493-5918448:+:L1HS:REF
↕ chr11:24327951-24334001:+:L1HS:REF
↕ chr11:25500009-25502139:-:L1HS:REF
↕ chr11:31315654-31321680:-:L1HS:REF
↕ chr11:36551606-36557636:-:L1HS:REF
↕ chr11:48847694-48853724:-:L1HS:REF
↕ chr11:54849946-54851079:+:L1HS:REF
↕ chr11:58000000-58000187:-:L1HS:REF
↕ chr11:78677772-78683802:-:L1HS:REF
↕ chr11:82155865-82161891:+:L1HS:REF
↕ chr11:85324758-85330821:+:L1HS:REF
↕ chr11:87340031-87346061:-:L1HS:REF
↕ chr11:90400067-90406098:-:L1HS:REF
↕ chr11:90966271-90972302:-:L1HS:REF
↕ chr11:93136638-93142673:+:L1HS:REF
↕ chr11:93420986-93427031:+:L1HS:REF
↕ chr11:95436216-95442246:+:L1HS:REF
↕ chr11:108685166-108685556:-:L1HS:REF
↕ chr11:109177494-109183526:-:L1HS:REF
↕ chr11:125536609-125542640:+:L1HS:REF
↕ chr12:3500000-3505228:-:L1HS:REF
↕ chr12:28073478-28073480:-:L1HS:NONREF
↕ chr12:38799646-38805673:+:L1HS:REF
↕ chr12:44108220-44114234:-:L1HS:REF
↕ chr12:51562631-51568657:-:L1HS:REF
↕ chr12:54788573-54794627:+:L1HS:REF
↕ chr12:55096256-55102283:-:L1HS:REF
↕ chr12:69773410-69779441:-:L1HS:REF
↕ chr12:73283667-73289668:-:L1HS:REF
↕ chr12:74874868-74880901:+:L1HS:REF
↕ chr12:101146043-101152064:+:L1HS:REF
↕ chr12:108996947-109000000:+:L1HS:REF
↕ chr12:126299023-126305038:-:L1HS:REF
↕ chr13:19496786-19500000:+:L1HS:REF
↕ chr13:29641706-29647706:-:L1HS:REF
↕ chr13:31302314-31308370:+:L1HS:REF
↕ chr13:34480262-34486294:-:L1HS:REF
↕ chr13:48465555-48471566:+:L1HS:REF
↕ chr13:54572234-54573121:+:L1HS:REF
↕ chr13:60888200-60888202:-:L1HS:NONREF
↕ chr13:74426326-74432354:+:L1HS:REF
↕ chr13:76612823-76618851:-:L1HS:REF
↕ chr13:92685561-92691592:-:L1HS:REF
↕ chr13:97667408-97673440:-:L1HS:REF
↕ chr13:105382665-105383251:-:L1HS:REF
↕ chr13:108510472-108516495:-:L1HS:REF
↕ chr14:30684809-30690837:-:L1HS:REF
↕ chr14:44705080-44711104:-:L1HS:REF
↕ chr14:45477110-45483169:-:L1HS:REF
↕ chr14:46727484-46727758:-:L1HS:REF
↕ chr14:48187082-48193113:+:L1HS:REF
↕ chr14:51794601-51800632:-:L1HS:REF
↕ chr14:52201038-52201040:-:L1HS:NONREF
↕ chr14:61055116-61061148:-:L1HS:REF
↕ chr14:62535851-62541882:+:L1HS:REF
↕ chr14:63116706-63122735:-:L1HS:REF
↕ chr14:70547290-70553322:+:L1HS:REF
↕ chr14:79314060-79314943:+:L1HS:REF
↕ chr15:33739636-33739638:-:L1HS:NONREF
↕ chr15:51417216-51423246:-:L1HS:REF
↕ chr15:54926081-54932099:-:L1HS:REF
↕ chr15:81995166-82000000:+:L1HS:REF
↕ chr15:82882881-82888919:-:L1HS:REF
↕ chr15:83450804-83456834:-:L1HS:REF
↕ chr15:87509891-87515920:+:L1HS:REF
↕ chr16:9584490-9590522:-:L1HS:REF
↕ chr16:16840517-16846556:-:L1HS:REF
↕ chr16:32587481-32588397:-:L1HS:REF
↕ chr16:33952564-33958612:-:L1HS:REF
↕ chr16:54042096-54048145:+:L1HS:REF
↕ chr16:65690011-65696020:+:L1HS:REF
↕ chr16:68583448-68589505:-:L1HS:REF
↕ chr16:80727089-80730717:+:L1HS:REF
↕ chr16:83637252-83643296:+:L1HS:REF
↕ chr17:9615985-9622015:+:L1HS:REF
↕ chr17:66596579-66602595:-:L1HS:REF
↕ chr17:66641175-66641177:+:L1HS:NONREF
↕ chr17:69000000-69005148:-:L1HS:REF
↕ chr18:535701-541755:+:L1HS:REF
↕ chr18:4477329-4478177:+:L1HS:REF
↕ chr18:5684668-5687891:+:L1HS:REF
↕ chr18:13975860-13981891:-:L1HS:REF
↕ chr18:15193133-15193135:-:L1HS:NONREF
↕ chr18:37819737-37825798:+:L1HS:REF
↕ chr18:41775014-41781045:+:L1HS:REF
↕ chr18:44021279-44024826:-:L1HS:REF
↕ chr18:47660373-47666427:+:L1HS:REF
↕ chr18:50343959-50349987:-:L1HS:REF
↕ chr18:62906292-62912314:+:L1HS:REF
↕ chr18:67603633-67605600:+:L1HS:REF
↕ chr18:70746549-70752581:-:L1HS:REF
↕ chr18:72966526-72972556:-:L1HS:REF
↕ chr18:75578680-75578682:-:L1HS:NONREF
↕ chr18:75846851-75852883:+:L1HS:REF
↕ chr19:43864494-43867300:-:L1HS:REF
↕ chr20:7116194-7122199:-:L1HS:REF
↕ chr20:11632779-11638837:+:L1HS:REF
↕ chr20:12801017-12807044:-:L1HS:REF
↕ chr20:23426108-23432140:+:L1HS:REF
↕ chr20:39977475-39977785:+:L1HS:REF
↕ chr21:22253869-22253871:-:L1HS:NONREF
↕ chr22:15214621-15220667:-:L1HS:REF
↕ chr22:22361253-22361255:+:L1HS:NONREF
↕ chr22:28663283-28669315:+:L1HS:REF
↕ chr22:34549683-34555708:-:L1HS:REF
↕ chr22:48985761-48991792:-:L1HS:REF
↕ chrX:11707248-11713279:+:L1HS:REF
↕ chrX:23238516-23244575:+:L1HS:REF
↕ chrX:26314417-26320446:-:L1HS:REF
↕ chrX:50019456-50025505:-:L1HS:REF
↕ chrX:56695884-56701916:+:L1HS:REF
↕ chrX:64013267-64019286:-:L1HS:REF
↕ chrX:66180696-66186728:-:L1HS:REF
↕ chrX:73106142-73112170:+:L1HS:REF
↕ chrX:73380991-73387013:+:L1HS:REF
↕ chrX:76233354-76239154:+:L1HS:REF
↕ chrX:80905077-80905430:-:L1HS:REF
↕ chrX:81841153-81847184:+:L1HS:REF
↕ chrX:83059584-83065637:-:L1HS:REF
↕ chrX:83542396-83548420:+:L1HS:REF
↕ chrX:83838051-83839860:-:L1HS:REF
↕ chrX:85733685-85734499:+:L1HS:REF
↕ chrX:87821407-87827419:+:L1HS:REF
↕ chrX:92254241-92256469:-:L1HS:REF
↕ chrX:96057824-96063842:-:L1HS:REF
↕ chrX:106469285-106475319:+:L1HS:REF
↕ chrX:112314520-112314522:-:L1HS:NONREF
↕ chrX:119435468-119441493:-:L1HS:REF
↕ chrX:127362223-127368248:+:L1HS:REF
↕ chrX:130517377-130523407:+:L1HS:REF
↕ chrX:142477849-142483853:+:L1HS:REF
↕ chrX:147653734-147659767:+:L1HS:REF
↕ chrX:149178166-149184185:-:L1HS:REF
↕ chrX:151330320-151336351:+:L1HS:REF
↕ chrX:155516016-155522048:-:L1HS:REF
↕ chrY:3443550-3449565:+:L1HS:REF
↕ chrY:4948913-4954938:-:L1HS:REF
↕ chrY:5606144-5612199:-:L1HS:REF
↕ chrY:9941130-9947151:+:L1HS:REF
↕ chrY:19034631-19038436:+:L1HS:REF
Methylation pattern visualisation created with
methpat
version 2.1.0.