Methylation of L1HS elements found in H1 (both full-length and 3'-truncated)

chr1:34566055-34572105:-:L1HS:REF

chr1 34571900:34572085
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920345719003457192434571934345719413457194534571950345719683457200334572034345720433457204634572052345720693457208551015read count

chr1:67078891-67084915:-:L1HS:REF

chr1 67084713:67084897
methylatedunmethylatedunknownpositionproportionpatterns123670847136708473767084747670847526708475467084758670847636708478167084816670848466708485567084858670848646708488167084897102030read count

chr1:68736693-68740136:-:L1HS:REF

chr1 68739931:68740116
methylatedunmethylatedunknownpositionproportionpatterns123456789687399316873995568739965687399706873997268739981687400346874006568740074687400776874010068740116102030read count

chr1:77000000-77005515:-:L1HS:REF

chr1 77005311:77005480
methylatedunmethylatedunknownpositionproportionpatterns123456789101112770053117700533577005345770053507700535277005356770053617700541477005445770054547700545777005463770054805101520read count

chr1:80939203-80945257:-:L1HS:REF

chr1 80945060:80945245
methylatedunmethylatedunknownpositionproportionpatterns12345678809450608094508480945094809450998094510180945105809451108094512880945163809451948094520380945206809452128094524551015202530read count

chr1:85748519-85754548:+:L1HS:REF

chr1 85748540:85748725
methylatedunmethylatedunknownpositionproportionpatterns1234585748540857485568574857385748582857485918574862285748657857486758574868485748686857486918574870185748725204060read count

chr1:85927067-85933100:+:L1HS:REF

chr1 85927088:85927273
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223242526859270888592710485927121859271278592713085927139859271708592720585927223859272288592723285927234859272398592727351015read count

chr1:86679080-86685111:-:L1HS:REF

chr1 86684907:86685092
methylatedunmethylatedunknownpositionproportionpatterns12345678910118668490786684931866849418668494686684948866849528668495786684975866850108668504186685050866850538668505986685076866850922468101214read count

chr1:104770247-104776278:-:L1HS:REF

chr1 104776073:104776276
methylatedunmethylatedunknownpositionproportionpatterns1234567891047760731047760971047761071047761121047761141047761231047761251047761761047762071047762161047762191047762251047762421047762581047762762468101214read count

chr1:104843833-104849864:-:L1HS:REF

chr1 104849660:104849845
methylatedunmethylatedunknownpositionproportionpatterns123451048496601048496841048496941048496991048497011048497051048497101048497121048497281048497631048497941048498061048498121048498291048498451020304050read count

chr1:113497220-113500000:+:L1HS:REF

chr1 113497236:113497405
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314113497236113497253113497259113497262113497271113497302113497337113497355113497360113497364113497366113497371113497381113497405123456read count

chr1:118852351-118858380:+:L1HS:REF

chr1 118852371:118852556
methylatedunmethylatedunknownpositionproportionpatterns1234567891188523711188523871188524041188524101188524131188524221188524531188524881188525061188525111188525151188525171188525221188525321188525565101520read count

chr1:121532230-121538261:-:L1HS:REF

chr1 121538056:121538241
methylatedunmethylatedunknownpositionproportionpatterns123456789101112153805612153808012153809012153809712153810112153810612153812412153815912153819012153819912153820212153820812153822512153824151015read count

chr1:146717192-146723218:-:L1HS:REF

chr1 146723013:146723198
methylatedunmethylatedunknownpositionproportionpatterns123456781467230131467230371467230471467230521467230541467230581467230631467230651467230811467231161467231471467231561467231591467231651467231821467231981020304050read count

chr1:166243053-166249084:-:L1HS:REF

chr1 166248880:166249065
methylatedunmethylatedunknownpositionproportionpatterns1234567891662488801662489041662489141662489191662489211662489251662489301662489481662489831662490141662490231662490261662490321662490491662490655101520read count

chr1:174590323-174596379:-:L1HS:REF

chr1 174596176:174596359
methylatedunmethylatedunknownpositionproportionpatterns1234517459617617459620017459621017459621517459621717459622117459624217459627717459630817459631717459632617459634317459635920406080100read count

chr1:179606225-179606227:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789101122385561647310413915716216616817318320710203040read count

chr1:180866811-180872843:-:L1HS:REF

chr1 180872638:180872823
methylatedunmethylatedunknownpositionproportionpatterns123456789101118087263818087266218087267218087267718087267918087268318087268818087270618087274118087277218087278118087278418087279018087280718087282324681012read count

chr1:187343764-187349794:-:L1HS:REF

chr1 187349590:187349775
methylatedunmethylatedunknownpositionproportionpatterns12187349590187349614187349624187349629187349631187349640187349658187349693187349724187349733187349736187349742187349775102030405060read count

chr1:187597671-187603699:+:L1HS:REF

chr1 187597689:187597874
methylatedunmethylatedunknownpositionproportionpatterns12345678910111218759768918759770518759772218759772818759773118759774018759777118759780618759782218759782418759782918759783518759784018759785018759787451015read count

chr1:193717837-193723892:-:L1HS:REF

chr1 193723689:193723874
methylatedunmethylatedunknownpositionproportionpatterns123456719372368919372371319372372419372372819372373019372373419372373919372375719372382319372383219372383519372384119372385819372387410203040read count

chr1:196219370-196225402:-:L1HS:REF

chr1 196225197:196225382
methylatedunmethylatedunknownpositionproportionpatterns1219622519719622522119622523119622523619622523819622524219622524719622530019622533119622534019622534319622534919622536619622538250100150read count

chr1:197707714-197713746:+:L1HS:REF

chr1 197707735:197707920
methylatedunmethylatedunknownpositionproportionpatterns12345619770773519770775119770776819770777419770777719770778619770781719770785219770787019770787519770787919770788119770788619770789619770792020406080read count

chr1:197802331-197803141:+:L1HS:REF

chr1 197802351:197802529
methylatedunmethylatedunknownpositionproportionpatterns123197802351197802364197802390197802433197802468197802486197802491197802495197802497197802529204060read count

chr1:209913771-209919823:-:L1HS:REF

chr1 209919652:209919803
methylatedunmethylatedunknownpositionproportionpatterns1234209919652209919657209919659209919663209919668209919686209919721209919761209919764209919770209919787209919803204060read count

chr1:220245155-220246008:+:L1HS:REF

chr1 220245175:220245360
methylatedunmethylatedunknownpositionproportionpatterns123422024517522024519122024522622024525722024529222024530822024531022024531922024532122024532622024533622024536020406080100read count

chr1:237019467-237025494:-:L1HS:REF

chr1 237025316:237025477
methylatedunmethylatedunknownpositionproportionpatterns123423702531623702532623702533123702533323702533723702534223702536023702539523702542623702543523702543823702544423702546123702547720406080100read count

chr1:237075264-237081293:+:L1HS:REF

chr1 237075264:237075444
methylatedunmethylatedunknownpositionproportionpatterns1234562370752642370752832370752992370753162370753222370753252370753342370753662370754002370754182370754232370754272370754292370754342370754442468read count

chr1:239623498-239629523:-:L1HS:REF

chr1 239629323:239629508
methylatedunmethylatedunknownpositionproportionpatterns123423962932323962934723962935723962936223962936423962936823962937323962937523962939123962942623962945723962946623962946923962947523962949223962950851015read count

chr1:242148274-242148276:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789101112132238556164731041391571621661681731832072468read count

chr2:11000000-11002136:-:L1HS:REF

chr2 11001931:11002116
methylatedunmethylatedunknownpositionproportionpatterns123456789101111001931110019551100196511001970110019721100197611001981110019991100203411002065110020741100208311002100110021165101520read count

chr2:16593725-16599758:-:L1HS:REF

chr2 16599553:16599738
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213165995531659957716599587165995921659959416599598165996031659962116599656165996871659969616599705165997221659973851015read count

chr2:36112506-36118537:-:L1HS:REF

chr2 36118332:36118517
methylatedunmethylatedunknownpositionproportionpatterns1234536118332361183563611836636118371361183733611837736118382361184003611843536118466361184753611847836118484361185013611851710203040read count

chr2:36343098-36343100:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123223855616473104139157162166168173183207510152025read count

chr2:41686503-41686505:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456223855616473104139157162166168173183207510152025read count

chr2:71411474-71417501:-:L1HS:REF

chr2 71417298:71417483
methylatedunmethylatedunknownpositionproportionpatterns1271417298714173227141733271417337714173397141734371417348714173507141736671417401714174327141744171417444714174507141746771417483102030405060read count

chr2:81870918-81870920:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789223855616473104139157162166168173183207510152025read count

chr2:86655238-86661268:-:L1HS:REF

chr2 86661064:86661233
methylatedunmethylatedunknownpositionproportionpatterns1234568666106486661088866610988666110586661114866611328666119886661207866612108666121686661233510152025read count

chr2:102566355-102572385:-:L1HS:REF

chr2 102572181:102572365
methylatedunmethylatedunknownpositionproportionpatterns1234567102572181102572204102572214102572219102572221102572225102572230102572248102572283102572323102572332102572349102572365102030405060read count

chr2:112503812-112509845:-:L1HS:REF

chr2 112509636:112509826
methylatedunmethylatedunknownpositionproportionpatterns1234112509636112509660112509670112509675112509677112509681112509686112509704112509739112509775112509784112509787112509793112509810112509826102030405060read count

chr2:126178048-126184064:-:L1HS:REF

chr2 126183883:126184044
methylatedunmethylatedunknownpositionproportionpatterns123456781261838831261838931261839001261839041261839091261839271261839621261839931261840021261840051261840111261840441.01.52.02.53.03.54.0read count

chr2:129415687-129417400:-:L1HS:REF

chr2 129417197:129417381
methylatedunmethylatedunknownpositionproportionpatterns123412941719712941722112941723512941723712941724112941724612941726412941729912941733012941733912941734212941734812941736512941738150100150read count

chr2:129685897-129687022:-:L1HS:REF

chr2 129686831:129687016
methylatedunmethylatedunknownpositionproportionpatterns1234567891011129686831129686855129686865129686870129686872129686876129686881129686899129686934129686965129686974129686977129686983129687000129687016246810read count

chr2:143860956-143866987:+:L1HS:REF

chr2 143860977:143861162
methylatedunmethylatedunknownpositionproportionpatterns123414386097714386099314386101014386101614386101914386102814386105914386109414386111214386111714386112114386112314386113814386116251015202530read count

chr2:148188745-148194773:+:L1HS:REF

chr2 148188764:148188949
methylatedunmethylatedunknownpositionproportionpatterns12345148188764148188780148188797148188803148188806148188815148188846148188881148188899148188904148188908148188910148188915148188925148188949102030405060read count

chr2:153007766-153013796:-:L1HS:REF

chr2 153013593:153013778
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161530135931530136171530136271530136321530136341530136381530136431530136611530136651530136961530137361530137391530137451530137621530137782468101214read count

chr2:155671335-155671337:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789223855616473104139157162166168173183207246810read count

chr2:157566353-157572377:+:L1HS:REF

chr2 157566368:157566529
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161715756636815756638415756640115756640715756641015756641915756645015756646615756648515756650815756651215756651415756651915756652951015read count

chr2:166988454-166994509:+:L1HS:REF

chr2 166988472:166988657
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516166988472166988488166988505166988511166988514166988554166988589166988607166988612166988616166988618166988623166988633166988657246810read count

chr2:169248623-169254656:+:L1HS:REF

chr2 169248643:169248827
methylatedunmethylatedunknownpositionproportionpatterns123416924864316924865916924867616924868216924868516924869416924872416924875916924877716924878216924878616924878816924879316924880316924882751015read count

chr2:172315270-172321297:+:L1HS:REF

chr2 172315287:172315472
methylatedunmethylatedunknownpositionproportionpatterns1234567891017231528717231530317231532017231532617231532917231533817231536917231540417231542217231542717231543117231543317231543817231544817231547251015read count

chr2:177973073-177979090:+:L1HS:REF

chr2 177973094:177973279
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223242526272829303132331779730941779731101779731271779731331779731361779731451779731761779732111779732291779732341779732381779732401779732451779732551779732792468read count

chr2:180833661-180839689:-:L1HS:REF

chr2 180839485:180839670
methylatedunmethylatedunknownpositionproportionpatterns1234518083948518083950918083952418083952618083953018083953518083953718083955318083958818083961918083962818083963118083963718083965418083967020406080read count

chr2:193170704-193171720:+:L1HS:REF

chr2 193170741:193170910
methylatedunmethylatedunknownpositionproportionpatterns1219317074119317075819317076419317076719317077619317080719317085819317086019317086519317086919317087119317087619317088619317091020406080100120read count

chr2:193212420-193218448:-:L1HS:REF

chr2 193218243:193218412
methylatedunmethylatedunknownpositionproportionpatterns12341932182431932182671932182771932182821932182841932182881932182931932182951932183111932183461932183771932183861932183891932183951932184121020304050read count

chr2:196905587-196911636:+:L1HS:REF

chr2 196905608:196905793
methylatedunmethylatedunknownpositionproportionpatterns123456789196905608196905624196905641196905647196905650196905659196905725196905741196905743196905748196905752196905754196905759196905769196905793246810read count

chr2:220413500-220413502:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345223855616473104139157162166168173183207102030405060read count

chr2:229476842-229476844:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011223855616473104139157162166168173183207246810read count

chr2:230337069-230342513:-:L1HS:REF

chr2 230342314:230342499
methylatedunmethylatedunknownpositionproportionpatterns12345623034231423034233823034234923034235323034235523034235923034236423034238223034245723034246023034246623034248323034249950100150read count

chr2:232149196-232155229:-:L1HS:REF

chr2 232155024:232155193
methylatedunmethylatedunknownpositionproportionpatterns12345678923215502423215504823215505823215506323215506523215506923215509223215512723215515823215516723215517023215517623215519351015read count

chr3:3963076-3969110:+:L1HS:REF

chr3 3963095:3963280
methylatedunmethylatedunknownpositionproportionpatterns12345396309539631113963128396313439631373963177396321239632303963235396323939632413963246396325639632801234567read count

chr3:4916534-4922591:+:L1HS:REF

chr3 4916534:4916740
methylatedunmethylatedunknownpositionproportionpatterns123456789491653449165554916571491658849165944916597491660649166374916658491667249166884916695491669949167014916705491671649167405101520read count

chr3:11488672-11492490:-:L1HS:REF

chr3 11492291:11492437
methylatedunmethylatedunknownpositionproportionpatterns12345671149229111492308114923181149232311492329114923531149241911492437510152025read count

chr3:17858274-17861391:-:L1HS:REF

chr3 17861189:17861374
methylatedunmethylatedunknownpositionproportionpatterns12345178611891786122317861228178612301786123417861239178612411786125717861292178613231786133217861335178613411786135817861374204060read count

chr3:18516080-18520244:+:L1HS:REF

chr3 18516101:18516286
methylatedunmethylatedunknownpositionproportionpatterns12345678918516101185161431851618318516218185162341851624718516252185162791851628651015read count

chr3:26036528-26042769:-:L1HS:REF

chr3 26042570:26042749
methylatedunmethylatedunknownpositionproportionpatterns12345678260425702604257926042604260426672604269826042707260427102604274951015202530read count

chr3:26398017-26404045:-:L1HS:REF

chr3 26403844:26404028
methylatedunmethylatedunknownpositionproportionpatterns123456789101112264038442640388326403885264038892640389426403912264039472640398626403989264039952640402851015202530read count

chr3:29108111-29112113:-:L1HS:REF

chr3 29111933:29112094
methylatedunmethylatedunknownpositionproportionpatterns12345678929111933291119432911194829111954291119592911197729112043291120522911205529112061291120941020304050read count

chr3:35454617-35458296:+:L1HS:REF

chr3 35454630:35454816
methylatedunmethylatedunknownpositionproportionpatterns12345678935454630354546633545466935454713354547663545477535454782354548093545481610203040read count

chr3:38584590-38584592:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567892238556164731041391571621661681731832072468101214read count

chr3:46783105-46789138:-:L1HS:REF

chr3 46788933:46789118
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314154678893346788957467889674678897246788974467889784678898346789001467890364678906746789076467890794678908546789102467891182468read count

chr3:54394322-54400323:-:L1HS:REF

chr3 54400121:54400306
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141554400121544001455440015554400160544001625440016654400171544001895440022454400255544002675440027354400290544003065101520read count

chr3:77763677-77769678:-:L1HS:REF

chr3 77769474:77769658
methylatedunmethylatedunknownpositionproportionpatterns1234577769474777694977776950777769512777695147776951877769541777695767776960777769619777696257776964277769658102030read count

chr3:80541011-80541013:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011223855616473104139157162166168173183207510152025read count

chr3:82337499-82339442:+:L1HS:REF

chr3 82337499:82337705
methylatedunmethylatedunknownpositionproportionpatterns12345678823374998233753682337559823375628233760282337637823376538233765582337660823376648233766682337671823376818233770510203040read count

chr3:85527417-85527419:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345672238556164731041391571621661681731832075101520read count

chr3:89460825-89466856:-:L1HS:REF

chr3 89466652:89466836
methylatedunmethylatedunknownpositionproportionpatterns123894666528946667689466686894666918946669389466697894667028946672089466755894667858946679489466797894668038946682089466836102030read count

chr3:90169567-90175598:-:L1HS:REF

chr3 90175417:90175578
methylatedunmethylatedunknownpositionproportionpatterns12345678901754179017543290175434901754389017544390175461901754969017553690175539901755459017556290175578510152025read count

chr3:103556537-103562569:-:L1HS:REF

chr3 103562364:103562549
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151035623641035623981035624031035624051035624091035624141035624321035624671035624981035625071035625101035625161035625331035625495101520read count

chr3:108749400-108755425:+:L1HS:REF

chr3 108749400:108749599
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171087494001087494141087494301087494471087494531087494561087494651087494961087495311087495491087495541087495581087495601087495651087495751087495991.01.52.02.53.0read count

chr3:109199872-109205903:+:L1HS:REF

chr3 109199872:109200077
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141091998721091998931091999091091999261091999321091999351091999441092000091092000271092000321092000361092000381092000431092000531092000775101520read count

chr3:110888814-110890548:+:L1HS:REF

chr3 110888833:110889017
methylatedunmethylatedunknownpositionproportionpatterns12345678110888833110888850110888866110888872110888875110888884110888914110888965110888967110888972110888976110888978110888983110888993110889017102030read count

chr3:116359999-116366026:+:L1HS:REF

chr3 116360017:116360201
methylatedunmethylatedunknownpositionproportionpatterns123451163600171163600331163600501163600561163600591163600681163601331163601511163601561163601601163601621163601671163601771163602011020304050read count

chr3:120573021-120579186:+:L1HS:REF

chr3 120573034:120573186
methylatedunmethylatedunknownpositionproportionpatterns123456120573034120573050120573073120573076120573085120573116120573151120573153120573175120573186123456read count

chr3:123871878-123871880:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819202238556164731041391571621661681731832075101520read count

chr3:132946006-132952034:-:L1HS:REF

chr3 132951831:132952016
methylatedunmethylatedunknownpositionproportionpatterns12345613295183113295185513295186513295187013295187213295187613295188113295189913295193413295195413295196513295197413295197713295198313295200013295201651015202530read count

chr3:136479056-136485103:-:L1HS:REF

chr3 136484898:136485083
methylatedunmethylatedunknownpositionproportionpatterns12345678136484898136484922136484932136484937136484939136484943136484948136484950136485001136485032136485041136485044136485050136485067136485083246810read count

chr3:136963693-136969736:-:L1HS:REF

chr3 136969518:136969716
methylatedunmethylatedunknownpositionproportionpatterns12345671369695181369695421369695521369695571369695591369695631369695681369695861369696211369696521369696611369696641369696701369696871369697161020304050read count

chr3:139590956-139596035:+:L1HS:REF

chr3 139590976:139591161
methylatedunmethylatedunknownpositionproportionpatterns123413959097613959099213959101513959102713959105813959109313959111113959111613959112013959112213959112713959113713959116120406080read count

chr3:151970297-151970299:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12322385561647310413915716216616817318320710203040read count

chr3:158019676-158025704:+:L1HS:REF

chr3 158019697:158019882
methylatedunmethylatedunknownpositionproportionpatterns12345671580196971580197131580197361580197391580197481580197791580198141580198321580198371580198411580198431580198481580198581580198822468101214read count

chr3:159095379-159101394:-:L1HS:REF

chr3 159101190:159101374
methylatedunmethylatedunknownpositionproportionpatterns12345678159101190159101214159101224159101229159101231159101235159101240159101258159101293159101323159101332159101335159101358159101374246810read count

chr3:163236941-163242962:+:L1HS:REF

chr3 163236941:163237141
methylatedunmethylatedunknownpositionproportionpatterns1234516323694116323695616323697216323698916323699516323699816323700716323703816323707316323709116323709616323710016323710216323710716323711716323714151015read count

chr3:164291525-164296426:+:L1HS:REF

chr3 164291546:164291731
methylatedunmethylatedunknownpositionproportionpatterns1234567816429154616429158516429158816429167916429168116429168616429168816429169016429169216429169716429172416429173124681012read count

chr3:190964647-190965526:-:L1HS:REF

chr3 190965339:190965524
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920211909653391909653461909653731909653781909653841909653891909653911909654071909654421909654731909654821909654851909655081909655241.01.52.02.53.03.54.0read count

chr4:14755114-14761144:+:L1HS:REF

chr4 14755133:14755318
methylatedunmethylatedunknownpositionproportionpatterns123456781475513314755149147551661475517214755175147552151475525014755266147552681475527914755284147552941475531851015read count

chr4:15841546-15847572:+:L1HS:REF

chr4 15841546:15841752
methylatedunmethylatedunknownpositionproportionpatterns123456789101584154615841549158415671584158315841600158416061584160915841618158416491584168415841707158417111584171315841718158417281584175251015read count

chr4:16942776-16944630:+:L1HS:REF

chr4 16942795:16942979
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151694279516942811169428281694283416942837169428461694287616942911169429291694293416942938169429401694294516942955169429795101520read count

chr4:23614771-23620793:+:L1HS:REF

chr4 23614792:23614978
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192021236147922361480823614825236148342361487523614910236149282361493323614937236149392361494423614954236149782468read count

chr4:48051954-48057974:-:L1HS:REF

chr4 48057781:48057966
methylatedunmethylatedunknownpositionproportionpatterns1234567894805778148057815480578204805782248057826480578334805784948057884480579154805792448057927480579334805795048057966102030read count

chr4:52538471-52544498:+:L1HS:REF

chr4 52538490:52538675
methylatedunmethylatedunknownpositionproportionpatterns1234567852538490525385065253852352538529525385325253854152538607525386305253863452538636525386415253865152538675102030read count

chr4:52816456-52822486:+:L1HS:REF

chr4 52816477:52816662
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516528164775281649352816510528165165281651952816528528165595281659452816612528166175281662152816623528166285281663852816662510152025read count

chr4:57562316-57568347:-:L1HS:REF

chr4 57568142:57568327
methylatedunmethylatedunknownpositionproportionpatterns123456575681425756816657568176575681815756818357568187575681925756821057568245575682855756828857568294575683115756832710203040read count

chr4:59078847-59084877:+:L1HS:REF

chr4 59078865:59079050
methylatedunmethylatedunknownpositionproportionpatterns12345659078865590788815907889859078904590789075907891659078947590789825907900059079005590790095907901159079016590790265907905010203040read count

chr4:61939927-61945962:-:L1HS:REF

chr4 61945757:61945942
methylatedunmethylatedunknownpositionproportionpatterns123456761945757619457816194579161945796619457986194580261945807619458256194586061945891619459006194590361945909619459421020304050read count

chr4:62726948-62732969:-:L1HS:REF

chr4 62732765:62732950
methylatedunmethylatedunknownpositionproportionpatterns12345627327656273278962732799627328046273280662732810627328156273283362732868627328996273290862732911627329176273295010203040read count

chr4:69664009-69667565:+:L1HS:REF

chr4 69664029:69664207
methylatedunmethylatedunknownpositionproportionpatterns123456966402969664045696640626966406869664080696641116966416269664164696641736966417569664207102030405060read count

chr4:70015396-70019676:-:L1HS:REF

chr4 70019471:70019640
methylatedunmethylatedunknownpositionproportionpatterns123456700194717001949570019505700195217001957470019605700196177001962370019640102030read count

chr4:74717539-74723587:-:L1HS:REF

chr4 74723382:74723567
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314747233827472340674723416747234237472342774723432747234507472348574723516747235257472352874723534747235517472356751015202530read count

chr4:78105735-78111765:+:L1HS:REF

chr4 78105755:78105940
methylatedunmethylatedunknownpositionproportionpatterns123456781057557810577178105788781057947810579778105806781058377810587278105888781058907810589578105899781059017810590678105940204060read count

chr4:79704552-79710581:+:L1HS:REF

chr4 79704570:79704755
methylatedunmethylatedunknownpositionproportionpatterns1234567970457079704586797046037970460979704612797046217970465279704687797047037970470579704710797047147970471679704721797047317970475551015202530read count

chr4:79937715-79943746:+:L1HS:REF

chr4 79937734:79937918
methylatedunmethylatedunknownpositionproportionpatterns123799377347993775079937767799377737993777679937785799378157993785079937868799378737993787979937884799378947993791851015202530read count

chr4:79966907-79972933:+:L1HS:REF

chr4 79966907:79967111
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121379966907799669277996696079966966799669697996697879967008799670437996706179967066799670707996707279967077799670877996711124681012read count

chr4:87347103-87353146:-:L1HS:REF

chr4 87352942:87353126
methylatedunmethylatedunknownpositionproportionpatterns123458735294287352966873529768735298187352983873529878735299287353010873530458735307587353084873530878735309387353110873531261020304050read count

chr4:91437491-91443691:+:L1HS:REF

chr4 91437510:91437696
methylatedunmethylatedunknownpositionproportionpatterns1234569143751091437526914375439143754991437561914376279143764691437655914376629143767291437696102030read count

chr4:91978211-91984413:+:L1HS:REF

chr4 91978211:91978393
methylatedunmethylatedunknownpositionproportionpatterns1234569197821191978232919782489197826591978271919782839197834991978367919783729197837691978378919783839197839320406080read count

chr4:93608283-93614338:-:L1HS:REF

chr4 93614133:93614318
methylatedunmethylatedunknownpositionproportionpatterns12345936141339361415793614172936141749361417893614183936142019361426793614276936142799361428593614302936143181020304050read count

chr4:93638307-93644337:-:L1HS:REF

chr4 93644134:93644318
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181993644134936441589364416893644173936441759364417993644184936442029364423793644267936442769364427993644285936443029364431824681012read count

chr4:98592435-98598463:-:L1HS:REF

chr4 98598258:98598443
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516985982589859828298598292985982979859829998598303985983089859832698598361985983929859840198598404985984109859842798598443510152025read count

chr4:106571057-106577070:-:L1HS:REF

chr4 106576868:106577053
methylatedunmethylatedunknownpositionproportionpatterns1231065768681065768921065769021065769071065769091065769131065769181065769361065770021065770111065770141065770201065770371065770535101520read count

chr4:110690112-110693684:-:L1HS:REF

chr4 110693489:110693667
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151106934891106935061106935211106935271106935321106935341106935851106936251106936281106936675101520read count

chr4:111894801-111900831:+:L1HS:REF

chr4 111894820:111895005
methylatedunmethylatedunknownpositionproportionpatterns12345611189482011189483611189485311189485911189486211189490211189493711189495311189496011189496611189497111189498111189500520406080100read count

chr4:119948726-119954758:-:L1HS:REF

chr4 119954577:119954738
methylatedunmethylatedunknownpositionproportionpatterns12345611995457711995459211995459411995459811995460311995462111995465611995468711995469611995469911995470511995472211995473850100150read count

chr4:135178140-135183747:-:L1HS:REF

chr4 135183555:135183733
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617135183555135183587135183589135183593135183598135183612135183616135183651135183682135183694135183700135183717135183733510152025read count

chr4:136293494-136299546:-:L1HS:REF

chr4 136299344:136299528
methylatedunmethylatedunknownpositionproportionpatterns1234513629934413629936813629937813629938313629938513629938913629939413629941213629944713629947713629948613629948913629949513629951213629952810203040read count

chr4:137496278-137500000:+:L1HS:REF

chr4 137496287:137496472
methylatedunmethylatedunknownpositionproportionpatterns123456789101113749628713749630313749632013749632613749632913749633813749636913749640413749642013749642213749642613749643313749643813749644813749647251015read count

chr4:144809658-144810951:+:L1HS:REF

chr4 144809679:144809864
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223242526272829301448096791448097121448097181448097301448097611448097961448098121448098141448098191448098231448098251448098301448098401448098641234567read count

chr4:166449405-166449678:-:L1HS:REF

chr4 166449477:166449662
methylatedunmethylatedunknownpositionproportionpatterns123456789166449477166449501166449511166449516166449518166449522166449527166449545166449580166449611166449620166449623166449646166449662102030read count

chr4:166569976-166576007:+:L1HS:REF

chr4 166569997:166570181
methylatedunmethylatedunknownpositionproportionpatterns1234567891665699971665700131665700301665700361665700391665700481665700781665701131665701311665701361665701401665701421665701471665701571665701815101520read count

chr4:166850455-166851634:+:L1HS:REF

chr4 166850455:166850659
methylatedunmethylatedunknownpositionproportionpatterns12345678166850455166850474166850507166850516166850556166850587166850607166850614166850618166850620166850635166850652166850659102030read count

chr4:169515501-169521532:-:L1HS:REF

chr4 169521328:169521512
methylatedunmethylatedunknownpositionproportionpatterns1234567816952132816952135116952136116952136616952136816952137216952137716952139516952143016952146116952147016952147316952147916952149616952151220406080100read count

chr4:189137085-189143104:+:L1HS:REF

chr4 189137100:189137285
methylatedunmethylatedunknownpositionproportionpatterns123456781891371001891371161891371331891371391891371421891371511891371821891372171891372331891372351891372401891372441891372461891372511891372611891372852468101214read count

chr5:4500001-4502372:-:L1HS:REF

chr5 4502167:4502352
methylatedunmethylatedunknownpositionproportionpatterns123456789450216745021914502201450221245022174502219450223545022704502301450231045023364502352204060read count

chr5:13416497-13422525:+:L1HS:REF

chr5 13416518:13416703
methylatedunmethylatedunknownpositionproportionpatterns123456789101113416518134165341341655113416560134165691341660013416635134166531341665813416662134166641341666913416679134166871341670324681012read count

chr5:15906515-15912550:-:L1HS:REF

chr5 15912346:15912515
methylatedunmethylatedunknownpositionproportionpatterns1234561591234615912370159123801591238515912387159123911591239615912414159124491591248015912489159124921591249815912515510152025read count

chr5:21207622-21207624:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567822556164731041391571621661681731832075101520read count

chr5:34147845-34154031:+:L1HS:REF

chr5 34147845:34148048
methylatedunmethylatedunknownpositionproportionpatterns12345634147845341478643414788034147897341479033414790634147915341479453414798034147998341480073414800934148014341480485101520read count

chr5:52086499-52088220:-:L1HS:REF

chr5 52088022:52088209
methylatedunmethylatedunknownpositionproportionpatterns123455208802252088039520880545208805652088065520880835208814952088209510152025read count

chr5:66750283-66754219:+:L1HS:REF

chr5 66750304:66750488
methylatedunmethylatedunknownpositionproportionpatterns123456675030466750337667503436675034666750355667503856675042066750436667504436675044966750454667504646675048810203040read count

chr5:79778884-79784938:-:L1HS:REF

chr5 79784739:79784924
methylatedunmethylatedunknownpositionproportionpatterns1234797847397978476379784773797847787978478479784789797847917978480779784842797848737978488279784885797848917978490879784924510152025read count

chr5:81616090-81622140:+:L1HS:REF

chr5 81616109:81616294
methylatedunmethylatedunknownpositionproportionpatterns123456781616109816161258161614281616148816161518161616081616191816162268161624481616249816162538161625581616260816162708161629451015202530read count

chr5:86510690-86516743:+:L1HS:REF

chr5 86510711:86510896
methylatedunmethylatedunknownpositionproportionpatterns123456789865107118651074486510750865107538651076286510793865108288651084686510851865108558651085786510862865108728651089610203040read count

chr5:90154963-90154965:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213142238556164731041391571621661681731832072468read count

chr5:102131356-102137385:+:L1HS:REF

chr5 102131377:102131562
methylatedunmethylatedunknownpositionproportionpatterns12345678910102131377102131393102131410102131416102131419102131459102131494102131512102131517102131521102131523102131528102131538102131562102030read count

chr5:102189483-102194435:+:L1HS:REF

chr5 102189502:102189687
methylatedunmethylatedunknownpositionproportionpatterns12345102189502102189518102189535102189541102189544102189553102189584102189619102189637102189642102189646102189648102189653102189663102189687510152025read count

chr5:104518587-104524616:+:L1HS:REF

chr5 104518607:104518791
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141510451860710451864010451864610451864910451865810451868810451872310451874110451875010451875210451875710451876710451879151015read count

chr5:105513236-105519274:-:L1HS:REF

chr5 105519069:105519254
methylatedunmethylatedunknownpositionproportionpatterns123456710551906910551909310551910310551910810551911410551911910551913710551917210551920310551921210551921510551922110551923810551925410203040read count

chr5:109259387-109265418:+:L1HS:REF

chr5 109259408:109259592
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141510925940810925942410925944110925944710925945010925945910925948910925952410925954210925954710925955110925955310925955810925956810925959251015202530read count

chr5:111302238-111308262:+:L1HS:REF

chr5 111302252:111302437
methylatedunmethylatedunknownpositionproportionpatterns1234111302252111302268111302285111302291111302294111302303111302334111302369111302387111302392111302396111302403111302413111302437102030read count

chr5:116113364-116113366:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123452238556164731041391571621661681731832072468read count

chr5:119684785-119690814:-:L1HS:REF

chr5 119690612:119690797
methylatedunmethylatedunknownpositionproportionpatterns12345119690612119690636119690646119690651119690653119690657119690664119690680119690715119690755119690781119690797510152025read count

chr5:133583288-133589299:+:L1HS:REF

chr5 133583306:133583489
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819201335833061335833221335833391335833451335833481335833571335833881335834231335834391335834441335834481335834501335834551335834651335834892468read count

chr5:146609485-146615534:+:L1HS:REF

chr5 146609500:146609685
methylatedunmethylatedunknownpositionproportionpatterns1234567891014660950014660951614660953314660953914660954214660955114660958214660961714660963514660964014660964414660964614660965114660966114660968551015202530read count

chr5:152886441-152892473:-:L1HS:REF

chr5 152892268:152892453
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171815289226815289229215289230215289230715289230915289233615289237115289240215289241115289241415289242015289243715289245351015read count

chr5:153070982-153077008:-:L1HS:REF

chr5 153076809:153076994
methylatedunmethylatedunknownpositionproportionpatterns123456153076809153076833153076843153076848153076850153076854153076877153076912153076943153076952153076955153076961153076978153076994510152025read count

chr5:156061919-156067966:-:L1HS:REF

chr5 156067762:156067946
methylatedunmethylatedunknownpositionproportionpatterns12345615606776215606778615606779615606780115606780315606780715606781215606783015606786515606789515606790415606790715606791315606793015606794620406080100read count

chr5:160709608-160715639:-:L1HS:REF

chr5 160715436:160715621
methylatedunmethylatedunknownpositionproportionpatterns1234516071543616071546016071547016071547516071547716071548116071548616071550416071553916071557016071557916071558216071558816071560516071562120406080read count

chr5:162530742-162531677:-:L1HS:REF

chr5 162531476:162531644
methylatedunmethylatedunknownpositionproportionpatterns123416253147616253151716253157916253160016253160916253162116253164410203040read count

chr5:165068136-165068138:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617182238556164731041391571621661681731832075101520read count

chr5:166141191-166145692:-:L1HS:REF

chr5 166145506:166145691
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819201661455061661455401661455451661455471661455521661455561661455581661455741661456091661456401661456491661456521661456581661456751661456912468101214read count

chr5:166966760-166972815:-:L1HS:REF

chr5 166972613:166972798
methylatedunmethylatedunknownpositionproportionpatterns123456781669726131669726371669726471669726521669726541669726581669726631669726811669727161669727561669727591669727651669727821669727981020304050read count

chr5:173402796-173408828:-:L1HS:REF

chr5 173408623:173408808
methylatedunmethylatedunknownpositionproportionpatterns1234517340862317340864717340865717340866217340866417340866817340867317340869117340872617340875717340876617340876917340877517340879217340880851015202530read count

chr5:177772245-177778274:+:L1HS:REF

chr5 177772266:177772451
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192017777226617777228217777229917777230517777230817777231717777234817777238317777240117777240617777241017777241217777241717777242717777245124681012read count

chr6:2417774-2423803:-:L1HS:REF

chr6 2423598:2423783
methylatedunmethylatedunknownpositionproportionpatterns1234242359824236222423632242363724236392423643242364824236662423701242373224237412423744242375024237672423783204060read count

chr6:13190800-13190802:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891022385561647310413915716216616817318320751015read count

chr6:13502816-13502818:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151622385561647310413915716216616817318320751015read count

chr6:51874783-51880802:+:L1HS:REF

chr6 51874786:51874955
methylatedunmethylatedunknownpositionproportionpatterns123456789101151874786518748035187480951874812518748215187485251874887518749055187491051874914518749165187492151874931518749551.01.52.02.53.0read count

chr6:62658301-62658303:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131422385561647310413915716216616817318320751015read count

chr6:69495362-69500000:+:L1HS:REF

chr6 69495422:69495534
methylatedunmethylatedunknownpositionproportionpatterns123456769495422694954256949546569495516694955236949553420406080100read count

chr6:70010347-70016552:+:L1HS:REF

chr6 70010347:70010552
methylatedunmethylatedunknownpositionproportionpatterns123456787001034770010368700103847001040170010407700104107001041970010449700104847001050270010507700105117001051370010517700105287001055220406080read count

chr6:72988654-72994686:-:L1HS:REF

chr6 72994481:72994666
methylatedunmethylatedunknownpositionproportionpatterns1234572994481729945057299452072994522729945267299453172994549729945847299461572994624729946277299463372994650729946661020304050read count

chr6:76875759-76877075:-:L1HS:REF

chr6 76876870:76877039
methylatedunmethylatedunknownpositionproportionpatterns123456789101112768768707687689476876904768769117687691576876920768769387687697376877004768770137687702276877039510152025read count

chr6:83333952-83339981:+:L1HS:REF

chr6 83333973:83334158
methylatedunmethylatedunknownpositionproportionpatterns1234567833339738333400683334012833340158333402483334055833340908333410683334113833341178333411983334124833341348333415810203040read count

chr6:93865738-93871783:-:L1HS:REF

chr6 93871578:93871763
methylatedunmethylatedunknownpositionproportionpatterns123456938715789387160293871612938716179387161993871646938716819387171293871721938717249387173093871747938717635101520read count

chr6:94197995-94204060:-:L1HS:REF

chr6 94203855:94204040
methylatedunmethylatedunknownpositionproportionpatterns1234594203855942038799420388994203894942038969420390094203905942039239420395894203989942039989420400194204007942040249420404020406080read count

chr6:98703059-98708329:+:L1HS:REF

chr6 98703077:98703262
methylatedunmethylatedunknownpositionproportionpatterns123456789870307798703093987031109870311698703119987031289870313098703159987031949870321098703217987032219870322398703228987032389870326210203040read count

chr6:112703745-112709778:+:L1HS:REF

chr6 112703766:112703951
methylatedunmethylatedunknownpositionproportionpatterns123456711270376611270378211270379911270380511270380811270384811270388311270390111270390611270391011270391211270391711270392711270395151015202530read count

chr6:117102131-117108163:+:L1HS:REF

chr6 117102152:117102313
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415117102152117102168117102185117102191117102194117102203117102234117102287117102296117102298117102303117102313510152025read count

chr6:121162716-121168725:+:L1HS:REF

chr6 121162730:121162915
methylatedunmethylatedunknownpositionproportionpatterns12345678910111212116273012116276312116276912116277212116281212116284712116286512116287012116287412116287612116288112116289112116291551015202530read count

chr6:128998385-129000000:+:L1HS:REF

chr6 128998406:128998590
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151289984061289984221289984451289984481289984571289984871289985221289985401289985451289985491289985511289985561289985661289985905101520read count

chr6:133020691-133026746:-:L1HS:REF

chr6 133026542:133026726
methylatedunmethylatedunknownpositionproportionpatterns1231330265421330265661330265761330265811330265831330265871330265921330266101330266451330266751330266841330266871330266931330267101330267261020304050read count

chr6:156034135-156040165:+:L1HS:REF

chr6 156034156:156034340
methylatedunmethylatedunknownpositionproportionpatterns12345615603415615603417215603418915603419515603419815603420715603423715603427215603429015603429515603429915603430615603434051015202530read count

chr6:156324980-156331010:-:L1HS:REF

chr6 156330805:156330990
methylatedunmethylatedunknownpositionproportionpatterns12345678156330805156330829156330839156330844156330846156330850156330855156330873156330908156330939156330951156330957156330974156330990204060read count

chr6:157547703-157547705:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456223855616473104139157162166168173183207102030read count

chr7:7465092-7471120:+:L1HS:REF

chr7 7465092:7465297
methylatedunmethylatedunknownpositionproportionpatterns123456774650927465113746512974651467465152746515574651647465195746523074652337465248746525374652577465259746526474652747465297102030405060read count

chr7:8351723-8353975:+:L1HS:REF

chr7 8351743:8351929
methylatedunmethylatedunknownpositionproportionpatterns12345835174383517838351786835179583518268351861835187983518908351903835190583519228351929102030405060read count

chr7:12497211-12500000:+:L1HS:REF

chr7 12497232:12497417
methylatedunmethylatedunknownpositionproportionpatterns123456124972321249724812497271124972741249728312497314124973651249737212497376124973781249739312497410124974171020304050read count

chr7:25041860-25047891:-:L1HS:REF

chr7 25047686:25047871
methylatedunmethylatedunknownpositionproportionpatterns123456782504768625047710250477202504772525047727250477312504773625047754250477682504778925047820250478292504783225047855250478715101520read count

chr7:30439242-30445274:+:L1HS:REF

chr7 30439263:30439448
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223243043926330439279304392963043930230439305304393143043934530439366304393803043939630439398304394033043940730439409304394143043942430439448246810read count

chr7:49680245-49686300:-:L1HS:REF

chr7 49686097:49686281
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131449686097496861214968613149686136496861384968614249686147496861654968620049686230496862394968624249686248496862654968628151015read count

chr7:57539590-57540834:+:L1HS:REF

chr7 57539647:57539790
methylatedunmethylatedunknownpositionproportionpatterns12345678575396475753965657539745575397495753975657539783575397905101520read count

chr7:63148831-63154859:-:L1HS:REF

chr7 63154654:63154839
methylatedunmethylatedunknownpositionproportionpatterns123456786315465463154678631546886315469363154695631546996315470463154706631547226315475763154788631547976315480063154806631548236315483951015read count

chr7:66286853-66292884:-:L1HS:REF

chr7 66292679:66292864
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819202122236629267966292703662927136629271866292720662927246629272966292747662927826629281366292822662928256629283166292848662928641.01.52.02.53.0read count

chr7:70197328-70203357:+:L1HS:REF

chr7 70197349:70197534
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415167019734970197365701973827019738870197391701974007019743170197466701974847019748970197493701974957019750070197510701975345101520read count

chr7:97613656-97619688:+:L1HS:REF

chr7 97613677:97613862
methylatedunmethylatedunknownpositionproportionpatterns1234567897613677976136929761371097613716976137199761372897613759976137949761381297613817976138219761382397613828976138625101520read count

chr7:108188818-108188820:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456782238556164731041391571621661681731832075101520read count

chr7:110707004-110713024:-:L1HS:REF

chr7 110712831:110713016
methylatedunmethylatedunknownpositionproportionpatterns1234511071283111071286511071287011071287211071288111071289911071293411071296511071297411071298311071300011071301610203040read count

chr7:111243515-111249546:-:L1HS:REF

chr7 111249342:111249526
methylatedunmethylatedunknownpositionproportionpatterns1234511124934211124936611124937611124938111124938311124938711124939211124941011124944511124947511124948411124948711124949311124951011124952651015202530read count

chr7:111963193-111969223:+:L1HS:REF

chr7 111963214:111963399
methylatedunmethylatedunknownpositionproportionpatterns12345678910111963214111963230111963247111963253111963256111963296111963331111963349111963354111963358111963360111963375111963399510152025read count

chr7:125179570-125181978:-:L1HS:REF

chr7 125181774:125181959
methylatedunmethylatedunknownpositionproportionpatterns12345678910111251817741251817981251818081251818131251818151251818191251818421251818771251819081251819201251819261251819431251819595101520read count

chr7:141062014-141068042:-:L1HS:REF

chr7 141067837:141068022
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171410678371410678611410678711410678781410678821410678871410678891410679051410679401410679711410679801410679831410679891410680225101520read count

chr7:141920659-141926712:-:L1HS:REF

chr7 141926508:141926692
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223242526272829303132333435361419265081419265321419265421419265471419265491419265531419265581419265761419266111419266411419266501419266531419266591419266761419266922468read count

chr7:147842591-147848623:-:L1HS:REF

chr7 147848418:147848603
methylatedunmethylatedunknownpositionproportionpatterns12345671478484181478484421478484521478484571478484631478484681478484861478485211478485521478485611478485701478485871478486035101520read count

chr7:150597094-150602628:+:L1HS:REF

chr7 150597154:150597197
methylatedunmethylatedunknownpositionproportionpatterns123451505971541505971661505971972468read count

chr8:8470859-8476906:+:L1HS:REF

chr8 8470880:8471065
methylatedunmethylatedunknownpositionproportionpatterns12345678910118470880847089684709138470919847092284709318470962847101384710158471020847102484710268471031847104184710652468101214read count

chr8:27113618-27119645:+:L1HS:REF

chr8 27113635:27113820
methylatedunmethylatedunknownpositionproportionpatterns1234567827113635271136512711366827113674271136772711368627113717271137522711377027113775271137792711378127113786271137962711382051015read count

chr8:71486984-71486986:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617182238556164731041391571621661681731832075101520read count

chr8:75621331-75627355:-:L1HS:REF

chr8 75627151:75627336
methylatedunmethylatedunknownpositionproportionpatterns12345678975627151756271857562719075627192756271967562721975627238756272547562728575627294756272977562732075627336510152025read count

chr8:88685705-88691760:+:L1HS:REF

chr8 88685705:88685911
methylatedunmethylatedunknownpositionproportionpatterns1234567886857058868574288685759886857658868576888685777886858088868584388685861886858708868587288685877886858878868591151015read count

chr8:91522091-91528121:-:L1HS:REF

chr8 91527919:91528087
methylatedunmethylatedunknownpositionproportionpatterns123456789152791991527943915279539152795891527960915279649152796991527987915280229152805291528061915280649152807091528087246810read count

chr8:104739851-104745873:-:L1HS:REF

chr8 104745668:104745853
methylatedunmethylatedunknownpositionproportionpatterns12310474566810474569210474570710474571310474571810474573610474577110474580210474581110474581410474582010474583010474583710474585310203040read count

chr8:121329878-121334807:-:L1HS:REF

chr8 121334614:121334799
methylatedunmethylatedunknownpositionproportionpatterns123412133461412133462112133463812133464812133466412133466612133468212133471712133474812133475712133476012133476612133478312133479910203040read count

chr8:127311575-127315431:+:L1HS:REF

chr8 127311575:127311739
methylatedunmethylatedunknownpositionproportionpatterns12345612731157512731161112731162812731163412731163712731163912731166812731167712731173012731173512731173920406080read count

chr8:135875862-135881890:+:L1HS:REF

chr8 135875883:135876068
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181913587588313587589913587592213587592513587593413587596513587600013587601813587602313587602713587602913587603413587604413587606851015read count

chr8:136438074-136444105:-:L1HS:REF

chr8 136443900:136444085
methylatedunmethylatedunknownpositionproportionpatterns12345678136443900136443924136443934136443939136443941136443945136443950136443968136444034136444043136444046136444052136444069136444085510152025read count

chr9:5491417-5491419:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011223855616473104139157162166168173183207246810read count

chr9:20655632-20658802:-:L1HS:REF

chr9 20658600:20658784
methylatedunmethylatedunknownpositionproportionpatterns12345678910111220658600206586242065863420658639206586412065864520658668206587032065873320658745206587512065876820658784510152025read count

chr9:28111895-28117865:-:L1HS:REF

chr9 28117732:28117835
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819281177322811776628117771281177732811777728117782281178002811783551015read count

chr9:63913382-63916426:+:L1HS:REF

chr9 63913400:63913578
methylatedunmethylatedunknownpositionproportionpatterns123456786391340063913439639134426391351763913544639135781.01.52.02.53.03.54.0read count

chr9:83049539-83055571:-:L1HS:REF

chr9 83055366:83055551
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516830553668305539083055400830554058305540783055411830554168305541883055434830554468305545383055469830555008305550983055512830555188305553583055551510152025read count

chr9:90149604-90155634:+:L1HS:REF

chr9 90149624:90149809
methylatedunmethylatedunknownpositionproportionpatterns12345679014962490149640901496579014966390149666901496759014970690149741901497599014976490149770901497759014978590149809102030read count

chr9:94113535-94119565:-:L1HS:REF

chr9 94119361:94119546
methylatedunmethylatedunknownpositionproportionpatterns123494119361941193859411939594119400941194029411940694119411941194299411946494119495941195049411950794119513941195309411954610203040read count

chr9:95697585-95703604:+:L1HS:REF

chr9 95697600:95697785
methylatedunmethylatedunknownpositionproportionpatterns1234567956976009569761695697633956976399569764295697651956976829569771795697735956977409569774695697751956977619569778524681012read count

chr9:99498741-99500000:+:L1HS:REF

chr9 99498761:99498946
methylatedunmethylatedunknownpositionproportionpatterns123456789994987619949879499498800994988039949881299498843994988789949889499498896994989019949890599498907994989129949892299498946246810read count

chr9:103237485-103241471:+:L1HS:REF

chr9 103237538:103237690
methylatedunmethylatedunknownpositionproportionpatterns12345610323753810323754710323755610323763810323764910323765110323765610323768410323769051015202530read count

chr9:110417102-110423126:+:L1HS:REF

chr9 110417123:110417308
methylatedunmethylatedunknownpositionproportionpatterns123411041712311041713911041715611041716211041716511041717411041720511041723311041724011041725811041726311041726711041726911041727411041728411041730851015202530read count

chr9:110791097-110797129:+:L1HS:REF

chr9 110791118:110791303
methylatedunmethylatedunknownpositionproportionpatterns1234567811079111811079113411079115111079115711079116011079116911079120011079123511079125311079125811079126211079126411079126911079127911079130310203040read count

chr9:112798107-112804159:-:L1HS:REF

chr9 112803958:112804142
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212211280395811280398211280399211280399711280399911280400311280400811280402611280406111280409111280410011280410311280410911280412611280414251015read count

chr10:5245354-5251383:+:L1HS:REF

chr10 5245374:5245559
methylatedunmethylatedunknownpositionproportionpatterns1234567891011125245374524539052454075245413524541652454255245456524549152455095245514524551852455205245525524553552455595101520read count

chr10:6369617-6375667:-:L1HS:REF

chr10 6375462:6375647
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121363754626375486637549663755016375503637550763755126375530637556563755966375605637560863756146375631637564751015read count

chr10:19088601-19094618:-:L1HS:REF

chr10 19094413:19094582
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121909441319094437190944471909445219094454190944581909448119094516190945471909455619094559190945651909458251015read count

chr10:25418756-25418758:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789101122385561647310413915716216616817318320751015202530read count

chr10:33510845-33516876:-:L1HS:REF

chr10 33516672:33516857
methylatedunmethylatedunknownpositionproportionpatterns123453351667233516696335167063351671133516713335167173351672233516740335167753351680633516815335168183351682433516841335168575101520read count

chr10:37995443-38000000:+:L1HS:REF

chr10 37995478:37995634
methylatedunmethylatedunknownpositionproportionpatterns12345678910113799547837995495379955013799550437995513379955443799557937995595379956003799563410203040read count

chr10:67189566-67189568:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213142238556164731041391571621661681731832075101520read count

chr10:81441665-81441975:-:L1HS:REF

chr10 81441782:81441967
methylatedunmethylatedunknownpositionproportionpatterns1238144178281441806814418168144182781441832814418348144185081441861814418858144191681441928814419348144196720406080100read count

chr10:85355506-85361538:+:L1HS:REF

chr10 85355527:85355712
methylatedunmethylatedunknownpositionproportionpatterns12345685355527853555438535556085355566853555698535557885355609853556448535566285355667853556718535567885355688853557125101520read count

chr10:98782941-98788971:-:L1HS:REF

chr10 98788766:98788951
methylatedunmethylatedunknownpositionproportionpatterns1234569878876698788790987888009878880598788811987888169878886998788900987889099878891298788918987889359878895110203040read count

chr10:105377346-105383377:-:L1HS:REF

chr10 105383173:105383357
methylatedunmethylatedunknownpositionproportionpatterns12345610538317310538319710538320710538321210538321410538321810538322310538324110538330610538331510538331810538332410538334110538335751015202530read count

chr10:105775520-105781551:-:L1HS:REF

chr10 105781346:105781531
methylatedunmethylatedunknownpositionproportionpatterns123410578134610578137010578138010578138710578139110578141410578144910578148010578148910578149210578149810578151510578153151015202530read count

chr10:108310130-108316139:-:L1HS:REF

chr10 108315955:108316124
methylatedunmethylatedunknownpositionproportionpatterns123410831595510831597910831598910831599410831599610831600010831600710831602310831605810831609810831610110831610710831612410203040read count

chr10:122695714-122695716:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151622385561647310413915716216616817318320724681012read count

chr11:5914493-5918448:+:L1HS:REF

chr11 5914502:5914688
methylatedunmethylatedunknownpositionproportionpatterns12345675914502591453559145845914638591464359146475914688102030read count

chr11:24327951-24334001:+:L1HS:REF

chr11 24327971:24328155
methylatedunmethylatedunknownpositionproportionpatterns12324327971243279872432800424328010243280132432802224328052243280872432810524328110243281142432811624328121243281312432815520406080100read count

chr11:25500009-25502139:-:L1HS:REF

chr11 25501955:25502103
methylatedunmethylatedunknownpositionproportionpatterns1234567892550195525501958255019682550197325501975255019792550198625502002255020372550206825502086255021031.01.21.41.61.82.0read count

chr11:31315654-31321680:-:L1HS:REF

chr11 31321476:31321661
methylatedunmethylatedunknownpositionproportionpatterns12345678313214763132150031321510313215153132151731321521313215443132157931321610313216193132162231321628313216453132166110203040read count

chr11:36551606-36557636:-:L1HS:REF

chr11 36557432:36557617
methylatedunmethylatedunknownpositionproportionpatterns12345678365574323655745636557466365574713655747336557477365574823655748436557500365575353655756636557575365575783655758436557601365576175101520read count

chr11:48847694-48853724:-:L1HS:REF

chr11 48853519:48853704
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192021222324252648853519488535534885355848853564488535694885362248853653488536714885368848853704246810read count

chr11:54849946-54851079:+:L1HS:REF

chr11 54849960:54850145
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192021222324252627282954849960548499935484999954850002548500425485007754850100548501045485011154850121548501451.01.52.02.53.03.54.0read count

chr11:58000000-58000187:-:L1HS:REF

chr11 58000023:58000167
methylatedunmethylatedunknownpositionproportionpatterns123456789101112580000235800002758000050580000855800012558000128580001345800016724681012read count

chr11:78677772-78683802:-:L1HS:REF

chr11 78683599:78683784
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819202122237868359978683623786836337868363878683640786836447868364978683651786836677868370278683742786837457868375178683768786837841234567read count

chr11:82155865-82161891:+:L1HS:REF

chr11 82155865:82156064
methylatedunmethylatedunknownpositionproportionpatterns12345682155865821558798215589582155912821559188215592182155930821559618215599682156014821560198215602382156025821560308215604082156064102030405060read count

chr11:85324758-85330821:+:L1HS:REF

chr11 85324779:85324964
methylatedunmethylatedunknownpositionproportionpatterns12345678853247798532479585324812853248188532482185324830853248618532489685324914853249198532492385324925853249308532494085324964204060read count

chr11:87340031-87346061:-:L1HS:REF

chr11 87345856:87346041
methylatedunmethylatedunknownpositionproportionpatterns123456787345856873458808734589087345895873458978734590187345906873459248734595987345990873459998734600287346008873460258734604151015202530read count

chr11:90400067-90406098:-:L1HS:REF

chr11 90405894:90406079
methylatedunmethylatedunknownpositionproportionpatterns12349040589490405918904059289040593590405939904059449040596290405997904060289040603790406040904060469040606390406079102030read count

chr11:90966271-90972302:-:L1HS:REF

chr11 90972097:90972282
methylatedunmethylatedunknownpositionproportionpatterns12345678910119097209790972121909721319097213690972138909721429097216590972200909722319097224090972243909722499097228251015read count

chr11:93136638-93142673:+:L1HS:REF

chr11 93136659:93136843
methylatedunmethylatedunknownpositionproportionpatterns12345678910931366599313667593136692931366989313670193136710931367409313677593136793931367989313680293136804931368099313681993136843510152025read count

chr11:93420986-93427031:+:L1HS:REF

chr11 93420993:93421177
methylatedunmethylatedunknownpositionproportionpatterns1234567891011934209939342100993421026934210329342103593421044934210749342110993421127934211329342113693421138934211439342115393421177246810read count

chr11:95436216-95442246:+:L1HS:REF

chr11 95436236:95436420
methylatedunmethylatedunknownpositionproportionpatterns123456789101112139543623695436252954362699543627595436278954362879543631795436352954363709543637595436379954363819543638695436396954364205101520read count

chr11:108685166-108685556:-:L1HS:REF

chr11 108685353:108685538
methylatedunmethylatedunknownpositionproportionpatterns1234567891010868535310868537710868538710868539210868539410868539810868540310868542110868545610868548710868549610868550510868552210868553851015202530read count

chr11:109177494-109183526:-:L1HS:REF

chr11 109183321:109183506
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141091833211091833451091833551091833601091833621091833711091833891091833961091834241091834551091834641091834671091834731091835062468101214read count

chr11:125536609-125542640:+:L1HS:REF

chr11 125536628:125536813
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181912553662812553664412553666112553666712553667012553667912553671012553674512553676112553676812553677212553677912553678912553681324681012read count

chr12:3500000-3505228:-:L1HS:REF

chr12 3505023:3505208
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223350502335050473505057350506235050643505068350507335050913505126350515735051663505175350519235052081234567read count

chr12:28073478-28073480:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161722385561647310413915716616817318320751015202530read count

chr12:38799646-38805673:+:L1HS:REF

chr12 38799664:38799849
methylatedunmethylatedunknownpositionproportionpatterns123438799664387996803879969738799703387997063879971538799746387997813879979738799799387998043879980838799810387998153879982538799849510152025read count

chr12:44108220-44114234:-:L1HS:REF

chr12 44114029:44114214
methylatedunmethylatedunknownpositionproportionpatterns1234441140294411405344114063441140684411407044114074441140794411409744114132441141634411417244114175441141814411419844114214510152025read count

chr12:51562631-51568657:-:L1HS:REF

chr12 51568456:51568637
methylatedunmethylatedunknownpositionproportionpatterns12345678910115156845651568476515684865156849151568493515684975156850251568520515685555156858651568595515685985156860451568621515686375101520read count

chr12:54788573-54794627:+:L1HS:REF

chr12 54788573:54788776
methylatedunmethylatedunknownpositionproportionpatterns12345678547885735478859154788607547886245478863054788633547886425478867354788708547887265478873154788735547887375478874254788752547887762468read count

chr12:55096256-55102283:-:L1HS:REF

chr12 55102078:55102263
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617551020785510210255102117551021195510212355102146551021815510221255102221551022245510223055102247551022635101520read count

chr12:69773410-69779441:-:L1HS:REF

chr12 69779236:69779421
methylatedunmethylatedunknownpositionproportionpatterns12345697792366977926069779270697792756977927769779281697792866977930469779339697793706977937969779382697793886977940569779421204060read count

chr12:73283667-73289668:-:L1HS:REF

chr12 73289487:73289648
methylatedunmethylatedunknownpositionproportionpatterns123456773289487732894977328950273289504732895137328953173289566732895977328960673289609732896327328964820406080read count

chr12:74874868-74880901:+:L1HS:REF

chr12 74874889:74875074
methylatedunmethylatedunknownpositionproportionpatterns1234748748897487492274874928748749317487494074874971748750067487502474875029748750337487503574875040748750507487507420406080100120140read count

chr12:101146043-101152064:+:L1HS:REF

chr12 101146043:101146249
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212210114604310114608010114609710114610310114610610114614610114618110114618310114619710114620810114621510114622510114624912345read count

chr12:108996947-109000000:+:L1HS:REF

chr12 108996968:108997153
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192021222324251089969681089969841089970011089970071089970191089970501089970851089971011089971081089971121089971141089971191089971291089971531.01.52.02.53.03.54.0read count

chr12:126299023-126305038:-:L1HS:REF

chr12 126304837:126305021
methylatedunmethylatedunknownpositionproportionpatterns123451263048371263048611263048711263048761263048781263048821263048871263049051263049401263049701263049791263049821263049881263050051263050212468read count

chr13:19496786-19500000:+:L1HS:REF

chr13 19496786:19496967
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192021222324252627194967861949680719496823194968401949684619496849194968511949692319496939194969411949694619496950194969521949695719496967123456read count

chr13:29641706-29647706:-:L1HS:REF

chr13 29647533:29647701
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617182964753329647557296475672964757229647574296475782964758329647601296476362964766629647675296476782964768429647701510152025read count

chr13:31302314-31308370:+:L1HS:REF

chr13 31302314:31302519
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161731302314313023343130235031302367313023733130237631302385313024163130245131302469313024743130247831302480313024853130249531302519246810read count

chr13:34480262-34486294:-:L1HS:REF

chr13 34486089:34486274
methylatedunmethylatedunknownpositionproportionpatterns123456734486089344861133448612834486130344861343448613934486157344861923448622334486232344862353448624134486258344862741020304050read count

chr13:48465555-48471566:+:L1HS:REF

chr13 48465565:48465750
methylatedunmethylatedunknownpositionproportionpatterns123448465565484655814846559848465604484656074846561648465647484656824846570048465705484657114846571648465726484657501020304050read count

chr13:54572234-54573121:+:L1HS:REF

chr13 54572254:54572443
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161754572254545722705457228754572293545722965457230554572336545723715457237554572391545724025457240454572419545724432468101214read count

chr13:60888200-60888202:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213223861647310413915716216616817318320751015read count

chr13:74426326-74432354:+:L1HS:REF

chr13 74426341:74426526
methylatedunmethylatedunknownpositionproportionpatterns1234567891011744263417442635774426374744263807442638374426423744264587442646674426476744264817442648574426487744264927442650274426526246810read count

chr13:76612823-76618851:-:L1HS:REF

chr13 76618646:76618831
methylatedunmethylatedunknownpositionproportionpatterns1234567661864676618670766186857661868776618691766186967661871476618749766187807661878976618792766187987661881476618831102030read count

chr13:92685561-92691592:-:L1HS:REF

chr13 92691387:92691572
methylatedunmethylatedunknownpositionproportionpatterns1234569269138792691411926914219269142692691428926914329269143792691455926914909269152192691530926915339269153992691556926915721020304050read count

chr13:97667408-97673440:-:L1HS:REF

chr13 97673235:97673420
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718199767323597673259976732699767327497673276976732809767328597673287976733039767333897673369976733789767338197673387976734205101520read count

chr13:105382665-105383251:-:L1HS:REF

chr13 105383056:105383234
methylatedunmethylatedunknownpositionproportionpatterns12345678910538305610538307310538308310538308810538309010538311710538315210538319210538319510538320110538323424681012read count

chr13:108510472-108516495:-:L1HS:REF

chr13 108516297:108516482
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718191085162971085163211085163311085163361085163381085163421085163471085163491085163651085164311085164401085164431085164491085164661085164822468read count

chr14:30684809-30690837:-:L1HS:REF

chr14 30690632:30690834
methylatedunmethylatedunknownpositionproportionpatterns1234530690632306906563069066630690671306906733069067730690682306907003069071430690735306907663069077530690778306907843069080130690817306908341020304050read count

chr14:44705080-44711104:-:L1HS:REF

chr14 44710899:44711084
methylatedunmethylatedunknownpositionproportionpatterns1234567894471089944710933447109384471094044710944447109494471095144710967447110024471103244711042447110454471106844711084102030405060read count

chr14:45477110-45483169:-:L1HS:REF

chr14 45482988:45483149
methylatedunmethylatedunknownpositionproportionpatterns123456745482988454829984548300345483009454830144548303245483067454831074548311045483116454831334548314910203040read count

chr14:46727484-46727758:-:L1HS:REF

chr14 46727554:46727739
methylatedunmethylatedunknownpositionproportionpatterns123456467275544672757846727588467275934672759546727599467276044672762246727657467276884672769746727700467277064672772346727739204060read count

chr14:48187082-48193113:+:L1HS:REF

chr14 48187103:48187288
methylatedunmethylatedunknownpositionproportionpatterns1234567481871034818711948187136481871424818714548187154481871854818722048187238481872434818724748187254481872644818728820406080100120140read count

chr14:51794601-51800632:-:L1HS:REF

chr14 51800428:51800613
methylatedunmethylatedunknownpositionproportionpatterns1234567518004285180045251800462518004675180046951800473518004785180049651800562518005715180057451800580518005975180061351015read count

chr14:52201038-52201040:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415223855616473104139157162166168173183207510152025read count

chr14:61055116-61061148:-:L1HS:REF

chr14 61060943:61061128
methylatedunmethylatedunknownpositionproportionpatterns12346106094361060967610609776106098261060984610609886106099361060995610610116106104661061077610610866106108961061095610611126106112810203040read count

chr14:62535851-62541882:+:L1HS:REF

chr14 62535870:62536055
methylatedunmethylatedunknownpositionproportionpatterns12345625358706253588662535903625359096253591262535921625359526253598762536005625360106253601462536016625360216253603162536055102030read count

chr14:63116706-63122735:-:L1HS:REF

chr14 63122530:63122715
methylatedunmethylatedunknownpositionproportionpatterns1234567631225306312255463122564631225696312257163122575631225806312259863122633631226646312267363122676631226826312269963122715204060read count

chr14:70547290-70553322:+:L1HS:REF

chr14 70547311:70547496
methylatedunmethylatedunknownpositionproportionpatterns123456789101170547311705473277054734470547350705473537054736270547393705474287054744670547451705474557054745770547462705474727054749610203040read count

chr14:79314060-79314943:+:L1HS:REF

chr14 79314072:79314257
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213147931407279314088793141057931411179314114793141237931415479314189793142057931420779314212793142167931421879314223793142337931425751015read count

chr15:33739636-33739638:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415223855616473104139157162166168173183207246810read count

chr15:51417216-51423246:-:L1HS:REF

chr15 51423042:51423227
methylatedunmethylatedunknownpositionproportionpatterns1234567851423042514230665142307651423081514230835142308751423092514231105142314551423176514231855142318851423194514232115142322751015read count

chr15:54926081-54932099:-:L1HS:REF

chr15 54931895:54932080
methylatedunmethylatedunknownpositionproportionpatterns1234567854931895549319195493192954931934549319365493194054931945549319635493199854932029549320385493204154932047549320645493208051015read count

chr15:81995166-82000000:+:L1HS:REF

chr15 81995187:81995372
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314819951878199522081995229819952388199526981995304819953208199532281995327819953318199533381995338819953488199537251015read count

chr15:82882881-82888919:-:L1HS:REF

chr15 82888716:82888900
methylatedunmethylatedunknownpositionproportionpatterns123456789101182888716828887408288875582888757828887618288876682888784828888198288884982888858828888618288886782888884828889002468101214read count

chr15:83450804-83456834:-:L1HS:REF

chr15 83456630:83456815
methylatedunmethylatedunknownpositionproportionpatterns12345683456630834566548345666483456669834566718345667583456680834566988345673383456764834567738345677683456782834567998345681551015202530read count

chr15:87509891-87515920:+:L1HS:REF

chr15 87509909:87510094
methylatedunmethylatedunknownpositionproportionpatterns1234567875099098750992587509942875099488750995187509960875099918751002687510044875100498751005387510055875100608751007087510094510152025read count

chr16:9584490-9590522:-:L1HS:REF

chr16 9590317:9590502
methylatedunmethylatedunknownpositionproportionpatterns12345959031795903419590351959035695903589590362959036795903859590420959045195904609590463959046995904869590502510152025read count

chr16:16840517-16846556:-:L1HS:REF

chr16 16846363:16846548
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192021222316846363168463871684639716846402168464041684640816846413168464311684646616846497168465061684650916846515168465321684654824681012read count

chr16:32587481-32588397:-:L1HS:REF

chr16 32588216:32588377
methylatedunmethylatedunknownpositionproportionpatterns123456789101132588216325882263258824232588326325883383258834432588361325883775101520read count

chr16:33952564-33958612:-:L1HS:REF

chr16 33958408:33958592
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819203395840833958432339584423395844733958449339584533395845833958476339585113395854133958550339585533395855933958576339585921234567read count

chr16:54042096-54048145:+:L1HS:REF

chr16 54042114:54042299
methylatedunmethylatedunknownpositionproportionpatterns12345654042114540421305404214754042156540421655404219654042231540422495404225454042258540422605404226554042275540422995101520read count

chr16:65690011-65696020:+:L1HS:REF

chr16 65690019:65690170
methylatedunmethylatedunknownpositionproportionpatterns123456789101112136569001965690035656900526569005865690061656900706569010165690154656901596569016365690170102030read count

chr16:68583448-68589505:-:L1HS:REF

chr16 68589300:68589485
methylatedunmethylatedunknownpositionproportionpatterns1234567891011685893006858932468589334685893396858934168589345685893506858936868589403685894346858944368589452685894696858948551015read count

chr16:80727089-80730717:+:L1HS:REF

chr16 80727137:80727289
methylatedunmethylatedunknownpositionproportionpatterns12345678910118072713780727146807271558072718680727239807272448072725080727265807272828072728951015202530read count

chr16:83637252-83643296:+:L1HS:REF

chr16 83637252:83637470
methylatedunmethylatedunknownpositionproportionpatterns1238363725283637271836372878363730483637310836373288363733783637367836374028363742083637425836374298363743183637436836374468363747051015read count

chr17:9615985-9622015:+:L1HS:REF

chr17 9616006:9616191
methylatedunmethylatedunknownpositionproportionpatterns12345678910111296160069616022961603996160459616048961605796160889616123961613996161419616146961615096161529616157961616796161912468101214read count

chr17:66596579-66602595:-:L1HS:REF

chr17 66602390:66602575
methylatedunmethylatedunknownpositionproportionpatterns1236660239066602414666024246660242966602431666024356660244066602458666024936660252466602533666025366660254266602559666025755101520read count

chr17:66641175-66641177:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345672238556164731041391571621661681731832072468read count

chr17:69000000-69005148:-:L1HS:REF

chr17 69004943:69005142
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223246900494369004950690049676900497769004982690049936900499569005011690050466900507769005086690050896900511269005128690051421234567read count

chr18:535701-541755:+:L1HS:REF

chr18 535721:535905
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920215357215357375357545357605357635357725358015358375358535358555358605358665358715358815358985359051234567read count

chr18:4477329-4478177:+:L1HS:REF

chr18 4477348:4477533
methylatedunmethylatedunknownpositionproportionpatterns123456789101112134477348447736444773814477387447739044773994477430447745144774814477483447748844774924477494447749944775094477533246810read count

chr18:5684668-5687891:+:L1HS:REF

chr18 5684688:5684873
methylatedunmethylatedunknownpositionproportionpatterns1234567856846885684704568472156847275684730568473956847705684805568482156848285684832568483956848495684873510152025read count

chr18:13975860-13981891:-:L1HS:REF

chr18 13981686:13981871
methylatedunmethylatedunknownpositionproportionpatterns12345613981686139817101398172013981725139817271398173113981736139817381398175413981789139818201398182913981832139818381398185513981871102030read count

chr18:15193133-15193135:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011223855616473104139157162166168173183207510152025read count

chr18:37819737-37825798:+:L1HS:REF

chr18 37819758:37819943
methylatedunmethylatedunknownpositionproportionpatterns123456378197583781977437819791378197973781980037819840378198753781989337819898378199023781990437819909378199193781994320406080100read count

chr18:41775014-41781045:+:L1HS:REF

chr18 41775035:41775220
methylatedunmethylatedunknownpositionproportionpatterns1234567417750354177505241775068417750744177507741775086417751174177515241775170417751794177518141775186417751964177522010203040read count

chr18:44021279-44024826:-:L1HS:REF

chr18 44024621:44024806
methylatedunmethylatedunknownpositionproportionpatterns12345674402462144024628440246624402467144024689440247244402475544024767440248061020304050read count

chr18:47660373-47666427:+:L1HS:REF

chr18 47660391:47660576
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223476603914766040747660424476604304766043347660442476604734766050847660526476605314766053547660537476605424766055247660576123456read count

chr18:50343959-50349987:-:L1HS:REF

chr18 50349808:50349969
methylatedunmethylatedunknownpositionproportionpatterns12345678950349808503498185034982350349825503498295034985250349887503499275034993050349936503499535034996920406080100120read count

chr18:62906292-62912314:+:L1HS:REF

chr18 62906313:62906498
methylatedunmethylatedunknownpositionproportionpatterns12362906313629063296290634662906352629063556290636462906395629064306290645762906459629064646290647462906498102030read count

chr18:67603633-67605600:+:L1HS:REF

chr18 67603633:67603837
methylatedunmethylatedunknownpositionproportionpatterns123456676036336760365367603669676036866760369267603703676037346760376967603785676037926760383710203040read count

chr18:70746549-70752581:-:L1HS:REF

chr18 70752376:70752561
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819202122232425262728707523767075240070752410707524177075242170752426707524447075247970752510707525197075252270752528707525457075256124681012read count

chr18:72966526-72972556:-:L1HS:REF

chr18 72972351:72972536
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121372972351729723757297238572972390729723927297239672972401729724037297241972972454729724857297249772972503729725362468read count

chr18:75578680-75578682:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678922385561647310413915716216616817318320751015read count

chr18:75846851-75852883:+:L1HS:REF

chr18 75846872:75847057
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192021222324252627758468727584688875846905758469117584691475846923758469547584698975847007758470127584701675847018758470237584703375847057246810read count

chr19:43864494-43867300:-:L1HS:REF

chr19 43867132:43867292
methylatedunmethylatedunknownpositionproportionpatterns1234567843867132438671494386715343867158438671604386717643867211438672414386725043867253438672594386726843867276438672921020304050read count

chr20:7116194-7122199:-:L1HS:REF

chr20 7121995:7122180
methylatedunmethylatedunknownpositionproportionpatterns1234567891071219957122019712202971220347122036712204571220637122098712212971221387122141712214771221647122180510152025read count

chr20:11632779-11638837:+:L1HS:REF

chr20 11632796:11632981
methylatedunmethylatedunknownpositionproportionpatterns12345678911632796116328121163282911632835116328381163284711632878116329131163293111632936116329401163294211632947116329571163298151015202530read count

chr20:12801017-12807044:-:L1HS:REF

chr20 12806842:12807027
methylatedunmethylatedunknownpositionproportionpatterns123456781280684212806866128068761280688112806883128068871280689212806910128069451280697612806985128069881280699412807011128070272468101214read count

chr20:23426108-23432140:+:L1HS:REF

chr20 23426128:23426289
methylatedunmethylatedunknownpositionproportionpatterns12345678923426128234261442342616123426167234261702342617923426210234262452342626323426268234262722342627423426279234262891.01.52.02.53.0read count

chr20:39977475-39977785:+:L1HS:REF

chr20 39977506:39977674
methylatedunmethylatedunknownpositionproportionpatterns1234567399775063997752339977529399775323997754139977606399776243997763339977635399776403997767410203040read count

chr21:22253869-22253871:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678910112238556164731041391571621661681731832072468read count

chr22:15214621-15220667:-:L1HS:REF

chr22 15220462:15220647
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415220462152204861522050115220503152205071522051215220530152205651522059615220605152206081522061415220631152206471.01.52.02.53.0read count

chr22:22361253-22361255:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819202238556164731041391571621661681731832071.01.21.41.61.82.0read count

chr22:28663283-28669315:+:L1HS:REF

chr22 28663304:28663489
methylatedunmethylatedunknownpositionproportionpatterns123456789101128663304286633202866333728663343286633552866338628663421286634392866344428663448286634502866345528663465286634895101520read count

chr22:34549683-34555708:-:L1HS:REF

chr22 34555503:34555689
methylatedunmethylatedunknownpositionproportionpatterns1234567345555033455552734555542345555443455554834555555345555713455560634555624345556373455564734555650345556563455568920406080100120read count

chr22:48985761-48991792:-:L1HS:REF

chr22 48991587:48991772
methylatedunmethylatedunknownpositionproportionpatterns1234567489915874899161148991621489916264899162848991632489916374899163948991655489916904899172148991730489917334899173948991756489917722468101214read count

chrX:11707248-11713279:+:L1HS:REF

chrX 11707269:11707453
methylatedunmethylatedunknownpositionproportionpatterns1234567811707269117072851170730211707308117073111170732011707350117073851170739111707403117074081170741211707414117074191170742911707453102030read count

chrX:23238516-23244575:+:L1HS:REF

chrX 23238516:23238722
methylatedunmethylatedunknownpositionproportionpatterns12345678910112323851623238537232385532323857023238576232385792323858823238619232386702323867223238677232386812323868323238688232386982323872224681012read count

chrX:26314417-26320446:-:L1HS:REF

chrX 26320243:26320428
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151626320243263202672632027726320282263202842632029326320311263203462632037726320386263203892632039526320412263204285101520read count

chrX:50019456-50025505:-:L1HS:REF

chrX 50025300:50025485
methylatedunmethylatedunknownpositionproportionpatterns12345500253005002532450025334500253395002534150025345500253505002535250025368500254035002543450025443500254465002545250025469500254851020304050read count

chrX:56695884-56701916:+:L1HS:REF

chrX 56695905:56696090
methylatedunmethylatedunknownpositionproportionpatterns123456756695905566959215669593856695944566959475669595656695987566960225669604056696045566960495669605656696066566960905101520read count

chrX:64013267-64019286:-:L1HS:REF

chrX 64019081:64019266
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213146401908164019105640191156401912064019122640191266401913164019149640191846401921564019224640192276401923364019250640192662468read count

chrX:66180696-66186728:-:L1HS:REF

chrX 66186531:66186708
methylatedunmethylatedunknownpositionproportionpatterns12345678661865316618655766186562661865646618657366186591661866266618665766186666661866696618667566186692661867081.01.52.02.53.0read count

chrX:73106142-73112170:+:L1HS:REF

chrX 73106163:73106348
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819731061637310619673106202731062057310621473106245731062807310629873106303731063077310630973106314731063247310634851015read count

chrX:73380991-73387013:+:L1HS:REF

chrX 73381003:73381188
methylatedunmethylatedunknownpositionproportionpatterns123457338100373381019733810367338104273381045733810857338112073381138733811437338114773381149733811547338118851015202530read count

chrX:76233354-76239154:+:L1HS:REF

chrX 76233368:76233524
methylatedunmethylatedunknownpositionproportionpatterns12345677623336876233384762334017623341076233490762334947623352451015202530read count

chrX:80905077-80905430:-:L1HS:REF

chrX 80905251:80905396
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171880905251809052668090527780905295809053308090536180905370809053738090539624681012read count

chrX:81841153-81847184:+:L1HS:REF

chrX 81841174:81841358
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718818411748184120781841213818412168184122581841255818412908184130881841317818413198184132481841334818413582468101214read count

chrX:83059584-83065637:-:L1HS:REF

chrX 83065432:83065617
methylatedunmethylatedunknownpositionproportionpatterns123456783065432830654568306546683065471830654738306547783065482830655008306553583065566830655758306557883065584830656018306561724681012read count

chrX:83542396-83548420:+:L1HS:REF

chrX 83542415:83542600
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213835424158354243183542448835424548354245783542466835424978354253283542550835425558354255983542561835425668354257683542584835426005101520read count

chrX:83838051-83839860:-:L1HS:REF

chrX 83839657:83839842
methylatedunmethylatedunknownpositionproportionpatterns123456783839657838396648383968183839691838396988383970283839709838397258383976083839800838398038383984251015read count

chrX:85733685-85734499:+:L1HS:REF

chrX 85733764:85733807
methylatedunmethylatedunknownpositionproportionpatterns123458573376485733775857338075101520read count

chrX:87821407-87827419:+:L1HS:REF

chrX 87821428:87821613
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141587821428878214448782146187821467878214708782147987821510878215458782156387821568878215728782157487821579878215898782161351015read count

chrX:92254241-92256469:-:L1HS:REF

chrX 92256271:92256449
methylatedunmethylatedunknownpositionproportionpatterns123922562719225630392256305922563099225636792256410922564339225644910203040read count

chrX:96057824-96063842:-:L1HS:REF

chrX 96063638:96063823
methylatedunmethylatedunknownpositionproportionpatterns1234567891011129606363896063662960636729606367996063683960636889606370696063741960637819606378496063790960638079606382312345read count

chrX:106469285-106475319:+:L1HS:REF

chrX 106469305:106469490
methylatedunmethylatedunknownpositionproportionpatterns12345610646930510646932110646933810646934410646934710646935610646938710646942210646944010646944510646944910646945110646945610646946610646949051015202530read count

chrX:112314520-112314522:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121322385561647310413915716216616817318320751015read count

chrX:119435468-119441493:-:L1HS:REF

chrX 119441291:119441475
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151194412911194413151194413251194413301194413321194413361194413411194413591194413941194414241194414331194414361194414421194414591194414752468101214read count

chrX:127362223-127368248:+:L1HS:REF

chrX 127362243:127362428
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121312736224312736225912736227612736228212736228512736232512736236012736237812736238712736238912736239412736240412736242851015read count

chrX:130517377-130523407:+:L1HS:REF

chrX 130517396:130517581
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213051739613051741213051742913051743513051743813051744713051747813051751313051753113051754013051754213051754713051755713051758151015read count

chrX:142477849-142483853:+:L1HS:REF

chrX 142477865:142478050
methylatedunmethylatedunknownpositionproportionpatterns1234567891014247786514247788114247789814247790414247790714247791614247798214247800014247800514247800914247801114247801614247802614247805051015read count

chrX:147653734-147659767:+:L1HS:REF

chrX 147653734:147653940
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819202122232425262728291476537341476537551476537711476537881476537941476537971476538061476538371476538721476538901476538951476538991476539061476539161476539401234567read count

chrX:149178166-149184185:-:L1HS:REF

chrX 149183992:149184177
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819202122232425262728293014918399214918402614918403114918403314918403714918404214918406014918409514918412614918413814918414414918416114918417712345read count

chrX:151330320-151336351:+:L1HS:REF

chrX 151330341:151330525
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415133034115133035715133037415133038315133039215133042315133045815133047415133048115133048515133048715133049115133050115133052524681012read count

chrX:155516016-155522048:-:L1HS:REF

chrX 155521843:155522028
methylatedunmethylatedunknownpositionproportionpatterns12315552184315552186715552187715552188215552188415552188815552189315552191115552194615552197715552198615552198915552199515552201215552202810203040read count

chrY:3443550-3449565:+:L1HS:REF

chrY 3443570:3443754
methylatedunmethylatedunknownpositionproportionpatterns123456344357034435863443603344360934436123443621344364034436523443687344370534437103443714344371634437213443731344375451015202530read count

chrY:4948913-4954938:-:L1HS:REF

chrY 4954736:4954921
methylatedunmethylatedunknownpositionproportionpatterns12345678495473649547604954770495477549547774954781495480449548394954870495487949548824954921246810read count

chrY:5606144-5612199:-:L1HS:REF

chrY 5611994:5612179
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718561199456120185612028561203356120355612039561204456120625612097561212856121375612140561214656121635612179510152025read count

chrY:9941130-9947151:+:L1HS:REF

chrY 9941165:9941334
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161799411659941182994118899412009941231994126699412849941289994129399412959941300994131099413342468read count

chrY:19034631-19038436:+:L1HS:REF

chrY 19034680:19034832
methylatedunmethylatedunknownpositionproportionpatterns1234519034680190346861903469819034729190347821903479319034798190348081903482519034832102030read count

Visualisation settings

Methylation patterns

Histogram

Colour

Amplicon order

Drag the amplicon names up or down to reorder their display.

  • ↕ chr1:34566055-34572105:-:L1HS:REF
  • ↕ chr1:67078891-67084915:-:L1HS:REF
  • ↕ chr1:68736693-68740136:-:L1HS:REF
  • ↕ chr1:77000000-77005515:-:L1HS:REF
  • ↕ chr1:80939203-80945257:-:L1HS:REF
  • ↕ chr1:85748519-85754548:+:L1HS:REF
  • ↕ chr1:85927067-85933100:+:L1HS:REF
  • ↕ chr1:86679080-86685111:-:L1HS:REF
  • ↕ chr1:104770247-104776278:-:L1HS:REF
  • ↕ chr1:104843833-104849864:-:L1HS:REF
  • ↕ chr1:113497220-113500000:+:L1HS:REF
  • ↕ chr1:118852351-118858380:+:L1HS:REF
  • ↕ chr1:121532230-121538261:-:L1HS:REF
  • ↕ chr1:146717192-146723218:-:L1HS:REF
  • ↕ chr1:166243053-166249084:-:L1HS:REF
  • ↕ chr1:174590323-174596379:-:L1HS:REF
  • ↕ chr1:179606225-179606227:-:L1HS:NONREF
  • ↕ chr1:180866811-180872843:-:L1HS:REF
  • ↕ chr1:187343764-187349794:-:L1HS:REF
  • ↕ chr1:187597671-187603699:+:L1HS:REF
  • ↕ chr1:193717837-193723892:-:L1HS:REF
  • ↕ chr1:196219370-196225402:-:L1HS:REF
  • ↕ chr1:197707714-197713746:+:L1HS:REF
  • ↕ chr1:197802331-197803141:+:L1HS:REF
  • ↕ chr1:209913771-209919823:-:L1HS:REF
  • ↕ chr1:220245155-220246008:+:L1HS:REF
  • ↕ chr1:237019467-237025494:-:L1HS:REF
  • ↕ chr1:237075264-237081293:+:L1HS:REF
  • ↕ chr1:239623498-239629523:-:L1HS:REF
  • ↕ chr1:242148274-242148276:+:L1HS:NONREF
  • ↕ chr2:11000000-11002136:-:L1HS:REF
  • ↕ chr2:16593725-16599758:-:L1HS:REF
  • ↕ chr2:36112506-36118537:-:L1HS:REF
  • ↕ chr2:36343098-36343100:-:L1HS:NONREF
  • ↕ chr2:41686503-41686505:-:L1HS:NONREF
  • ↕ chr2:71411474-71417501:-:L1HS:REF
  • ↕ chr2:81870918-81870920:+:L1HS:NONREF
  • ↕ chr2:86655238-86661268:-:L1HS:REF
  • ↕ chr2:102566355-102572385:-:L1HS:REF
  • ↕ chr2:112503812-112509845:-:L1HS:REF
  • ↕ chr2:126178048-126184064:-:L1HS:REF
  • ↕ chr2:129415687-129417400:-:L1HS:REF
  • ↕ chr2:129685897-129687022:-:L1HS:REF
  • ↕ chr2:143860956-143866987:+:L1HS:REF
  • ↕ chr2:148188745-148194773:+:L1HS:REF
  • ↕ chr2:153007766-153013796:-:L1HS:REF
  • ↕ chr2:155671335-155671337:+:L1HS:NONREF
  • ↕ chr2:157566353-157572377:+:L1HS:REF
  • ↕ chr2:166988454-166994509:+:L1HS:REF
  • ↕ chr2:169248623-169254656:+:L1HS:REF
  • ↕ chr2:172315270-172321297:+:L1HS:REF
  • ↕ chr2:177973073-177979090:+:L1HS:REF
  • ↕ chr2:180833661-180839689:-:L1HS:REF
  • ↕ chr2:193170704-193171720:+:L1HS:REF
  • ↕ chr2:193212420-193218448:-:L1HS:REF
  • ↕ chr2:196905587-196911636:+:L1HS:REF
  • ↕ chr2:220413500-220413502:-:L1HS:NONREF
  • ↕ chr2:229476842-229476844:+:L1HS:NONREF
  • ↕ chr2:230337069-230342513:-:L1HS:REF
  • ↕ chr2:232149196-232155229:-:L1HS:REF
  • ↕ chr3:3963076-3969110:+:L1HS:REF
  • ↕ chr3:4916534-4922591:+:L1HS:REF
  • ↕ chr3:11488672-11492490:-:L1HS:REF
  • ↕ chr3:17858274-17861391:-:L1HS:REF
  • ↕ chr3:18516080-18520244:+:L1HS:REF
  • ↕ chr3:26036528-26042769:-:L1HS:REF
  • ↕ chr3:26398017-26404045:-:L1HS:REF
  • ↕ chr3:29108111-29112113:-:L1HS:REF
  • ↕ chr3:35454617-35458296:+:L1HS:REF
  • ↕ chr3:38584590-38584592:+:L1HS:NONREF
  • ↕ chr3:46783105-46789138:-:L1HS:REF
  • ↕ chr3:54394322-54400323:-:L1HS:REF
  • ↕ chr3:77763677-77769678:-:L1HS:REF
  • ↕ chr3:80541011-80541013:-:L1HS:NONREF
  • ↕ chr3:82337499-82339442:+:L1HS:REF
  • ↕ chr3:85527417-85527419:+:L1HS:NONREF
  • ↕ chr3:89460825-89466856:-:L1HS:REF
  • ↕ chr3:90169567-90175598:-:L1HS:REF
  • ↕ chr3:103556537-103562569:-:L1HS:REF
  • ↕ chr3:108749400-108755425:+:L1HS:REF
  • ↕ chr3:109199872-109205903:+:L1HS:REF
  • ↕ chr3:110888814-110890548:+:L1HS:REF
  • ↕ chr3:116359999-116366026:+:L1HS:REF
  • ↕ chr3:120573021-120579186:+:L1HS:REF
  • ↕ chr3:123871878-123871880:+:L1HS:NONREF
  • ↕ chr3:132946006-132952034:-:L1HS:REF
  • ↕ chr3:136479056-136485103:-:L1HS:REF
  • ↕ chr3:136963693-136969736:-:L1HS:REF
  • ↕ chr3:139590956-139596035:+:L1HS:REF
  • ↕ chr3:151970297-151970299:-:L1HS:NONREF
  • ↕ chr3:158019676-158025704:+:L1HS:REF
  • ↕ chr3:159095379-159101394:-:L1HS:REF
  • ↕ chr3:163236941-163242962:+:L1HS:REF
  • ↕ chr3:164291525-164296426:+:L1HS:REF
  • ↕ chr3:190964647-190965526:-:L1HS:REF
  • ↕ chr4:14755114-14761144:+:L1HS:REF
  • ↕ chr4:15841546-15847572:+:L1HS:REF
  • ↕ chr4:16942776-16944630:+:L1HS:REF
  • ↕ chr4:23614771-23620793:+:L1HS:REF
  • ↕ chr4:48051954-48057974:-:L1HS:REF
  • ↕ chr4:52538471-52544498:+:L1HS:REF
  • ↕ chr4:52816456-52822486:+:L1HS:REF
  • ↕ chr4:57562316-57568347:-:L1HS:REF
  • ↕ chr4:59078847-59084877:+:L1HS:REF
  • ↕ chr4:61939927-61945962:-:L1HS:REF
  • ↕ chr4:62726948-62732969:-:L1HS:REF
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  • ↕ chr4:74717539-74723587:-:L1HS:REF
  • ↕ chr4:78105735-78111765:+:L1HS:REF
  • ↕ chr4:79704552-79710581:+:L1HS:REF
  • ↕ chr4:79937715-79943746:+:L1HS:REF
  • ↕ chr4:79966907-79972933:+:L1HS:REF
  • ↕ chr4:87347103-87353146:-:L1HS:REF
  • ↕ chr4:91437491-91443691:+:L1HS:REF
  • ↕ chr4:91978211-91984413:+:L1HS:REF
  • ↕ chr4:93608283-93614338:-:L1HS:REF
  • ↕ chr4:93638307-93644337:-:L1HS:REF
  • ↕ chr4:98592435-98598463:-:L1HS:REF
  • ↕ chr4:106571057-106577070:-:L1HS:REF
  • ↕ chr4:110690112-110693684:-:L1HS:REF
  • ↕ chr4:111894801-111900831:+:L1HS:REF
  • ↕ chr4:119948726-119954758:-:L1HS:REF
  • ↕ chr4:135178140-135183747:-:L1HS:REF
  • ↕ chr4:136293494-136299546:-:L1HS:REF
  • ↕ chr4:137496278-137500000:+:L1HS:REF
  • ↕ chr4:144809658-144810951:+:L1HS:REF
  • ↕ chr4:166449405-166449678:-:L1HS:REF
  • ↕ chr4:166569976-166576007:+:L1HS:REF
  • ↕ chr4:166850455-166851634:+:L1HS:REF
  • ↕ chr4:169515501-169521532:-:L1HS:REF
  • ↕ chr4:189137085-189143104:+:L1HS:REF
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  • ↕ chr5:13416497-13422525:+:L1HS:REF
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  • ↕ chr5:52086499-52088220:-:L1HS:REF
  • ↕ chr5:66750283-66754219:+:L1HS:REF
  • ↕ chr5:79778884-79784938:-:L1HS:REF
  • ↕ chr5:81616090-81622140:+:L1HS:REF
  • ↕ chr5:86510690-86516743:+:L1HS:REF
  • ↕ chr5:90154963-90154965:+:L1HS:NONREF
  • ↕ chr5:102131356-102137385:+:L1HS:REF
  • ↕ chr5:102189483-102194435:+:L1HS:REF
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  • ↕ chr5:105513236-105519274:-:L1HS:REF
  • ↕ chr5:109259387-109265418:+:L1HS:REF
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  • ↕ chr5:133583288-133589299:+:L1HS:REF
  • ↕ chr5:146609485-146615534:+:L1HS:REF
  • ↕ chr5:152886441-152892473:-:L1HS:REF
  • ↕ chr5:153070982-153077008:-:L1HS:REF
  • ↕ chr5:156061919-156067966:-:L1HS:REF
  • ↕ chr5:160709608-160715639:-:L1HS:REF
  • ↕ chr5:162530742-162531677:-:L1HS:REF
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  • ↕ chr5:166141191-166145692:-:L1HS:REF
  • ↕ chr5:166966760-166972815:-:L1HS:REF
  • ↕ chr5:173402796-173408828:-:L1HS:REF
  • ↕ chr5:177772245-177778274:+:L1HS:REF
  • ↕ chr6:2417774-2423803:-:L1HS:REF
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  • ↕ chr6:13502816-13502818:+:L1HS:NONREF
  • ↕ chr6:51874783-51880802:+:L1HS:REF
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  • ↕ chr6:70010347-70016552:+:L1HS:REF
  • ↕ chr6:72988654-72994686:-:L1HS:REF
  • ↕ chr6:76875759-76877075:-:L1HS:REF
  • ↕ chr6:83333952-83339981:+:L1HS:REF
  • ↕ chr6:93865738-93871783:-:L1HS:REF
  • ↕ chr6:94197995-94204060:-:L1HS:REF
  • ↕ chr6:98703059-98708329:+:L1HS:REF
  • ↕ chr6:112703745-112709778:+:L1HS:REF
  • ↕ chr6:117102131-117108163:+:L1HS:REF
  • ↕ chr6:121162716-121168725:+:L1HS:REF
  • ↕ chr6:128998385-129000000:+:L1HS:REF
  • ↕ chr6:133020691-133026746:-:L1HS:REF
  • ↕ chr6:156034135-156040165:+:L1HS:REF
  • ↕ chr6:156324980-156331010:-:L1HS:REF
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  • ↕ chr7:7465092-7471120:+:L1HS:REF
  • ↕ chr7:8351723-8353975:+:L1HS:REF
  • ↕ chr7:12497211-12500000:+:L1HS:REF
  • ↕ chr7:25041860-25047891:-:L1HS:REF
  • ↕ chr7:30439242-30445274:+:L1HS:REF
  • ↕ chr7:49680245-49686300:-:L1HS:REF
  • ↕ chr7:57539590-57540834:+:L1HS:REF
  • ↕ chr7:63148831-63154859:-:L1HS:REF
  • ↕ chr7:66286853-66292884:-:L1HS:REF
  • ↕ chr7:70197328-70203357:+:L1HS:REF
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  • ↕ chr7:110707004-110713024:-:L1HS:REF
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  • ↕ chr7:111963193-111969223:+:L1HS:REF
  • ↕ chr7:125179570-125181978:-:L1HS:REF
  • ↕ chr7:141062014-141068042:-:L1HS:REF
  • ↕ chr7:141920659-141926712:-:L1HS:REF
  • ↕ chr7:147842591-147848623:-:L1HS:REF
  • ↕ chr7:150597094-150602628:+:L1HS:REF
  • ↕ chr8:8470859-8476906:+:L1HS:REF
  • ↕ chr8:27113618-27119645:+:L1HS:REF
  • ↕ chr8:71486984-71486986:-:L1HS:NONREF
  • ↕ chr8:75621331-75627355:-:L1HS:REF
  • ↕ chr8:88685705-88691760:+:L1HS:REF
  • ↕ chr8:91522091-91528121:-:L1HS:REF
  • ↕ chr8:104739851-104745873:-:L1HS:REF
  • ↕ chr8:121329878-121334807:-:L1HS:REF
  • ↕ chr8:127311575-127315431:+:L1HS:REF
  • ↕ chr8:135875862-135881890:+:L1HS:REF
  • ↕ chr8:136438074-136444105:-:L1HS:REF
  • ↕ chr9:5491417-5491419:+:L1HS:NONREF
  • ↕ chr9:20655632-20658802:-:L1HS:REF
  • ↕ chr9:28111895-28117865:-:L1HS:REF
  • ↕ chr9:63913382-63916426:+:L1HS:REF
  • ↕ chr9:83049539-83055571:-:L1HS:REF
  • ↕ chr9:90149604-90155634:+:L1HS:REF
  • ↕ chr9:94113535-94119565:-:L1HS:REF
  • ↕ chr9:95697585-95703604:+:L1HS:REF
  • ↕ chr9:99498741-99500000:+:L1HS:REF
  • ↕ chr9:103237485-103241471:+:L1HS:REF
  • ↕ chr9:110417102-110423126:+:L1HS:REF
  • ↕ chr9:110791097-110797129:+:L1HS:REF
  • ↕ chr9:112798107-112804159:-:L1HS:REF
  • ↕ chr10:5245354-5251383:+:L1HS:REF
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  • ↕ chr10:81441665-81441975:-:L1HS:REF
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  • ↕ chr10:98782941-98788971:-:L1HS:REF
  • ↕ chr10:105377346-105383377:-:L1HS:REF
  • ↕ chr10:105775520-105781551:-:L1HS:REF
  • ↕ chr10:108310130-108316139:-:L1HS:REF
  • ↕ chr10:122695714-122695716:+:L1HS:NONREF
  • ↕ chr11:5914493-5918448:+:L1HS:REF
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  • ↕ chr11:25500009-25502139:-:L1HS:REF
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  • ↕ chr11:48847694-48853724:-:L1HS:REF
  • ↕ chr11:54849946-54851079:+:L1HS:REF
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  • ↕ chr11:82155865-82161891:+:L1HS:REF
  • ↕ chr11:85324758-85330821:+:L1HS:REF
  • ↕ chr11:87340031-87346061:-:L1HS:REF
  • ↕ chr11:90400067-90406098:-:L1HS:REF
  • ↕ chr11:90966271-90972302:-:L1HS:REF
  • ↕ chr11:93136638-93142673:+:L1HS:REF
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  • ↕ chr11:108685166-108685556:-:L1HS:REF
  • ↕ chr11:109177494-109183526:-:L1HS:REF
  • ↕ chr11:125536609-125542640:+:L1HS:REF
  • ↕ chr12:3500000-3505228:-:L1HS:REF
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  • ↕ chr12:44108220-44114234:-:L1HS:REF
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  • ↕ chr12:54788573-54794627:+:L1HS:REF
  • ↕ chr12:55096256-55102283:-:L1HS:REF
  • ↕ chr12:69773410-69779441:-:L1HS:REF
  • ↕ chr12:73283667-73289668:-:L1HS:REF
  • ↕ chr12:74874868-74880901:+:L1HS:REF
  • ↕ chr12:101146043-101152064:+:L1HS:REF
  • ↕ chr12:108996947-109000000:+:L1HS:REF
  • ↕ chr12:126299023-126305038:-:L1HS:REF
  • ↕ chr13:19496786-19500000:+:L1HS:REF
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  • ↕ chr13:34480262-34486294:-:L1HS:REF
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  • ↕ chr13:74426326-74432354:+:L1HS:REF
  • ↕ chr13:76612823-76618851:-:L1HS:REF
  • ↕ chr13:92685561-92691592:-:L1HS:REF
  • ↕ chr13:97667408-97673440:-:L1HS:REF
  • ↕ chr13:105382665-105383251:-:L1HS:REF
  • ↕ chr13:108510472-108516495:-:L1HS:REF
  • ↕ chr14:30684809-30690837:-:L1HS:REF
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  • ↕ chr14:61055116-61061148:-:L1HS:REF
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  • ↕ chr16:9584490-9590522:-:L1HS:REF
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  • ↕ chr18:37819737-37825798:+:L1HS:REF
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  • ↕ chr18:44021279-44024826:-:L1HS:REF
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  • ↕ chr18:75846851-75852883:+:L1HS:REF
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