Methylation of L1HS elements found in HEK293T (both full-length and 3'-truncated)

chr1:34566055-34572105:-:L1HS:REF

chr1 34571900:34572085
methylatedunmethylatedunknownpositionproportionpatterns1234567834571900345719243457193434571941345719453457195034571968345720033457203434572043345720463457205234572069345720851234567read count

chr1:67078891-67084915:-:L1HS:REF

chr1 67084713:67084897
methylatedunmethylatedunknownpositionproportionpatterns12345678967084713670847376708474767084752670847546708475867084763670847816708481667084846670848556708485867084864670848816708489710203040read count

chr1:68736693-68740136:-:L1HS:REF

chr1 68739931:68740116
methylatedunmethylatedunknownpositionproportionpatterns123687399316873995568739965687399706873997268739981687400346874006568740074687400776874010068740116246810read count

chr1:77000000-77005515:-:L1HS:REF

chr1 77005311:77005480
methylatedunmethylatedunknownpositionproportionpatterns12345770053117700533577005345770053507700535277005356770053617700541477005445770054547700545777005463770054801020304050read count

chr1:80939203-80945257:-:L1HS:REF

chr1 80945060:80945245
methylatedunmethylatedunknownpositionproportionpatterns1234567809450608094508480945094809450998094510180945105809451108094512880945163809451948094520380945206809452128094524510203040read count

chr1:84052389-84058406:-:L1HS:REF

chr1 84058203:84058387
methylatedunmethylatedunknownpositionproportionpatterns123456840582038405822784058237840582428405824484058248840582538405827184058306840583368405834584058348840583548405837184058387510152025read count

chr1:85748519-85754548:+:L1HS:REF

chr1 85748540:85748725
methylatedunmethylatedunknownpositionproportionpatterns123456785748540857485568574857385748582857485918574862285748657857486758574868485748686857486918574870185748725204060read count

chr1:85927067-85933100:+:L1HS:REF

chr1 85927084:85927273
methylatedunmethylatedunknownpositionproportionpatterns123456788592708485927088859271048592712185927127859271308592713985927170859272058592722385927228859272328592723485927239859272735101520read count

chr1:86679080-86685111:-:L1HS:REF

chr1 86684907:86685092
methylatedunmethylatedunknownpositionproportionpatterns123456788668490786684931866849418668494686684948866849528668495786684975866850108668504186685050866850538668505986685076866850925101520read count

chr1:95336285-95336287:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12342238556164731041391571621661681731832071234567read count

chr1:104770247-104776278:-:L1HS:REF

chr1 104776073:104776276
methylatedunmethylatedunknownpositionproportionpatterns1234510477607310477609710477610710477611210477611410477612310477612510477617610477620710477621610477621910477622510477624210477625810477627651015202530read count

chr1:104843833-104849864:-:L1HS:REF

chr1 104849660:104849845
methylatedunmethylatedunknownpositionproportionpatterns1234567810484966010484968410484969410484969910484970110484970510484971010484971210484972810484976310484979410484980610484981210484982910484984520406080100read count

chr1:113497220-113500000:+:L1HS:REF

chr1 113497236:113497405
methylatedunmethylatedunknownpositionproportionpatterns1211349723611349725311349725911349726211349727111349730211349733711349735511349736011349736411349736611349737111349738111349740520406080read count

chr1:118852351-118858380:+:L1HS:REF

chr1 118852371:118852556
methylatedunmethylatedunknownpositionproportionpatterns123456789118852371118852387118852404118852410118852413118852422118852453118852488118852506118852511118852515118852517118852522118852532118852556204060read count

chr1:121532230-121538261:-:L1HS:REF

chr1 121538056:121538241
methylatedunmethylatedunknownpositionproportionpatterns12345121538056121538080121538090121538097121538101121538106121538124121538159121538190121538199121538202121538208121538225121538241204060read count

chr1:146717192-146723218:-:L1HS:REF

chr1 146723013:146723198
methylatedunmethylatedunknownpositionproportionpatterns1234514672301314672303714672304714672305214672305414672305814672306314672306514672308114672311614672314714672315614672315914672316514672318214672319820406080100read count

chr1:166243053-166249084:-:L1HS:REF

chr1 166248880:166249065
methylatedunmethylatedunknownpositionproportionpatterns1231662488801662489041662489141662489191662489211662489251662489301662489481662489831662490141662490231662490261662490321662490491662490655101520read count

chr1:174590323-174596379:-:L1HS:REF

chr1 174596176:174596359
methylatedunmethylatedunknownpositionproportionpatterns123456717459617617459620017459621017459621517459621717459622117459624217459627717459630817459631717459632617459634317459635950100150read count

chr1:179606225-179606227:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567822385561647310413915716216616817318320751015202530read count

chr1:180866811-180872843:-:L1HS:REF

chr1 180872638:180872823
methylatedunmethylatedunknownpositionproportionpatterns123418087263818087266218087267218087267718087267918087268318087268818087270618087274118087277218087278118087278418087279018087280718087282320406080100120140read count

chr1:187343764-187349794:-:L1HS:REF

chr1 187349590:187349775
methylatedunmethylatedunknownpositionproportionpatterns12345678918734959018734961418734962418734962918734963118734964018734965818734969318734972418734973318734973618734974218734977551015202530read count

chr1:187597671-187603699:+:L1HS:REF

chr1 187597689:187597874
methylatedunmethylatedunknownpositionproportionpatterns12345678918759768918759770518759772218759772818759773118759774018759777118759780618759782218759782418759782918759783518759784018759785018759787451015read count

chr1:193717837-193723892:-:L1HS:REF

chr1 193723689:193723874
methylatedunmethylatedunknownpositionproportionpatterns12345619372368919372371319372372419372372819372373019372373419372373919372375719372382319372383219372383519372384119372385819372387450100150read count

chr1:196219370-196225402:-:L1HS:REF

chr1 196225197:196225382
methylatedunmethylatedunknownpositionproportionpatterns12345619622519719622522119622523119622523619622523819622524219622524719622530019622533119622534019622534319622534919622536619622538220406080read count

chr1:197707714-197713746:+:L1HS:REF

chr1 197707735:197707920
methylatedunmethylatedunknownpositionproportionpatterns1234519770773519770775119770776819770777419770777719770778619770781719770785219770787019770787519770787919770788119770788619770789619770792050100150200read count

chr1:197802331-197803141:+:L1HS:REF

chr1 197802351:197802529
methylatedunmethylatedunknownpositionproportionpatterns12345619780235119780236419780239019780243319780246819780248619780249119780249519780249719780252950100read count

chr1:209913771-209919823:-:L1HS:REF

chr1 209919652:209919803
methylatedunmethylatedunknownpositionproportionpatterns123456209919652209919657209919659209919663209919668209919686209919721209919761209919764209919770209919787209919803204060read count

chr1:216485645-216487614:+:L1HS:REF

chr1 216485699:216485821
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213142164856992164857022164857112164857422164857952164858002164858042164858062164858112164858211.01.52.02.53.0read count

chr1:220245155-220246008:+:L1HS:REF

chr1 220245175:220245360
methylatedunmethylatedunknownpositionproportionpatterns12345622024517522024519122024522622024525722024529222024530822024531022024531922024532122024532622024533622024536050100150200250read count

chr1:237019467-237025494:-:L1HS:REF

chr1 237025316:237025477
methylatedunmethylatedunknownpositionproportionpatterns123456237025316237025326237025331237025333237025337237025342237025360237025395237025426237025435237025438237025444237025461237025477102030read count

chr1:237075264-237081293:+:L1HS:REF

chr1 237075264:237075444
methylatedunmethylatedunknownpositionproportionpatterns123456723707526423707528323707529923707531623707532223707532523707533423707536623707540023707541823707542323707542723707542923707543423707544410203040read count

chr1:239623498-239629523:-:L1HS:REF

chr1 239629323:239629508
methylatedunmethylatedunknownpositionproportionpatterns1234523962932323962934723962935723962936223962936423962936823962937323962937523962939123962942623962945723962946623962946923962947523962949223962950851015202530read count

chr2:11000000-11002136:-:L1HS:REF

chr2 11001931:11002116
methylatedunmethylatedunknownpositionproportionpatterns12345611001931110019551100196511001970110019721100197611001981110019991100203411002065110020741100208311002100110021161020304050read count

chr2:16593725-16599758:-:L1HS:REF

chr2 16599553:16599738
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131416599553165995771659958716599592165995941659959816599603165996211659965616599687165996961659970516599722165997385101520read count

chr2:22968126-22968128:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819202122232425262728293031323334353637383940414243442238556164731041391571621661681731832071.01.21.41.61.82.0read count

chr2:36112506-36118537:-:L1HS:REF

chr2 36118332:36118517
methylatedunmethylatedunknownpositionproportionpatterns123361183323611835636118366361183713611837336118377361183823611840036118435361184663611847536118478361184843611850136118517123456read count

chr2:36343098-36343100:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234522385561647310413915716216616817318320720406080read count

chr2:71411474-71417501:-:L1HS:REF

chr2 71417298:71417483
methylatedunmethylatedunknownpositionproportionpatterns127141729871417322714173327141733771417339714173437141734871417350714173667141740171417432714174417141744471417450714174677141748350100150read count

chr2:81870918-81870920:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1232238556164731041391571621661681731832071.01.52.02.53.0read count

chr2:86655238-86661268:-:L1HS:REF

chr2 86661064:86661233
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516866610648666108886661098866611058666111486661132866611988666120786661210866612168666123324681012read count

chr2:102566355-102572385:-:L1HS:REF

chr2 102572181:102572365
methylatedunmethylatedunknownpositionproportionpatterns12345610257218110257220410257221410257221910257222110257222510257223010257224810257228310257232310257233210257234910257236510203040read count

chr2:112503812-112509845:-:L1HS:REF

chr2 112509636:112509826
methylatedunmethylatedunknownpositionproportionpatterns12345611250963611250966011250967011250967511250967711250968111250968611250970411250973911250977511250978411250978711250979311250981011250982620406080read count

chr2:126178048-126184064:-:L1HS:REF

chr2 126183883:126184044
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819202122232425262728291261838831261838931261839001261839041261839091261839271261839621261839931261840021261840051261840111261840441.01.52.02.53.03.54.0read count

chr2:129415687-129417400:-:L1HS:REF

chr2 129417197:129417381
methylatedunmethylatedunknownpositionproportionpatterns123456781294171971294172211294172351294172371294172411294172461294172641294172991294173301294173391294173421294173481294173651294173812468101214read count

chr2:129685897-129687022:-:L1HS:REF

chr2 129686831:129687016
methylatedunmethylatedunknownpositionproportionpatterns1231296868311296868551296868651296868701296868721296868761296868811296868991296869341296869651296869741296869771296869831296870001296870161020304050read count

chr2:143253223-143253225:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011223855616473104139157162166168173183207246810read count

chr2:143860956-143866987:+:L1HS:REF

chr2 143860977:143861162
methylatedunmethylatedunknownpositionproportionpatterns12345614386097714386099314386101014386101614386101914386102814386105914386109414386111214386111714386112114386112314386113814386116220406080read count

chr2:148188745-148194773:+:L1HS:REF

chr2 148188764:148188949
methylatedunmethylatedunknownpositionproportionpatterns12314818876414818878014818879714818880314818880614818881514818884614818888114818889914818890414818890814818891014818891514818892514818894950100150read count

chr2:153007766-153013796:-:L1HS:REF

chr2 153013593:153013778
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151615301359315301361715301362715301363215301363415301363815301364315301366115301366515301369615301373615301373915301374515301376215301377824681012read count

chr2:155671339-155671341:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891022385561647310413915716216616817318320751015read count

chr2:157566353-157572377:+:L1HS:REF

chr2 157566368:157566529
methylatedunmethylatedunknownpositionproportionpatterns1234567891015756636815756638415756640115756640715756641015756641915756645015756646615756648515756650815756651215756651415756651915756652951015read count

chr2:160114516-160120680:+:L1HS:REF

chr2 160114537:160114715
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121601145371601145701601145791601146191601146701601146721601146771601146811601146831601146981601147151.01.21.41.61.82.0read count

chr2:166988454-166994509:+:L1HS:REF

chr2 166988472:166988657
methylatedunmethylatedunknownpositionproportionpatterns1234567891669884721669884881669885051669885111669885141669885541669885891669886071669886121669886161669886181669886231669886331669886571234567read count

chr2:169248623-169254656:+:L1HS:REF

chr2 169248643:169248827
methylatedunmethylatedunknownpositionproportionpatterns12345678916924864316924865916924867616924868216924868516924869416924872416924875916924877716924878216924878616924878816924879316924880316924882720406080read count

chr2:172315270-172321297:+:L1HS:REF

chr2 172315270:172315472
methylatedunmethylatedunknownpositionproportionpatterns12345671723152701723152871723153031723153201723153261723153291723153381723153691723154041723154221723154271723154311723154331723154381723154481723154725101520read count

chr2:175481951-175487994:-:L1HS:REF

chr2 175487792:175487976
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819202122232425262717548779217548781617548782617548783117548783317548783717548784217548786017548789517548792517548793417548793717548794317548796017548797651015read count

chr2:177973073-177979090:+:L1HS:REF

chr2 177973094:177973279
methylatedunmethylatedunknownpositionproportionpatterns12345678910111779730941779731101779731271779731331779731361779731451779731761779732111779732291779732341779732381779732401779732451779732551779732791020304050read count

chr2:180833661-180839689:-:L1HS:REF

chr2 180839485:180839670
methylatedunmethylatedunknownpositionproportionpatterns1234518083948518083950918083952418083952618083953018083953518083953718083955318083958818083961918083962818083963118083963718083965418083967050100150read count

chr2:190613973-190613975:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345622385561647310413915716216616817318320720406080read count

chr2:193170704-193171720:+:L1HS:REF

chr2 193170741:193170910
methylatedunmethylatedunknownpositionproportionpatterns1234519317074119317075819317076419317076719317077619317080719317085819317086019317086519317086919317087119317087619317088619317091020406080read count

chr2:193212420-193218448:-:L1HS:REF

chr2 193218243:193218412
methylatedunmethylatedunknownpositionproportionpatterns123451932182431932182671932182771932182821932182841932182881932182931932182951932183111932183461932183771932183861932183891932183951932184121020304050read count

chr2:196905587-196911636:+:L1HS:REF

chr2 196905608:196905793
methylatedunmethylatedunknownpositionproportionpatterns1234519690560819690562419690564119690564719690565019690565919690572519690574119690574319690574819690575219690575419690575919690576919690579320406080100120read count

chr2:213567231-213573262:-:L1HS:REF

chr2 213573057:213573243
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192021222135730572135730592135730832135731002135731042135731092135731112135731272135731622135731922135732012135732042135732102135732272135732431.01.21.41.61.82.0read count

chr2:220413500-220413502:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567892238556164731041391571621661681731832075101520read count

chr2:229476842-229476844:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456782238556164731041391571621661681731832072468read count

chr2:230337069-230342513:-:L1HS:REF

chr2 230342314:230342499
methylatedunmethylatedunknownpositionproportionpatterns1232303423142303423382303423492303423532303423552303423592303423642303423822303424572303424602303424662303424832303424991020304050read count

chr2:232149196-232155229:-:L1HS:REF

chr2 232155024:232155193
methylatedunmethylatedunknownpositionproportionpatterns1234523215502423215504823215505823215506323215506523215506923215509223215512723215515823215516723215517023215517623215519320406080100120read count

chr3:3963076-3969110:+:L1HS:REF

chr3 3963095:3963280
methylatedunmethylatedunknownpositionproportionpatterns1233963095396311139631283963134396313739631773963212396323039632353963239396324139632463963256396328020406080read count

chr3:4916534-4922591:+:L1HS:REF

chr3 4916534:4916740
methylatedunmethylatedunknownpositionproportionpatterns123456491653449165554916571491658849165944916597491660649166374916658491667249166884916695491669949167014916705491671649167401020304050read count

chr3:11488672-11492490:-:L1HS:REF

chr3 11492291:11492437
methylatedunmethylatedunknownpositionproportionpatterns1234114922911149230811492318114923231149232911492353114924191149243720406080read count

chr3:17858274-17861391:-:L1HS:REF

chr3 17861189:17861374
methylatedunmethylatedunknownpositionproportionpatterns123456178611891786122317861228178612301786123417861239178612411786125717861292178613231786133217861335178613411786135817861374204060read count

chr3:18516080-18520244:+:L1HS:REF

chr3 18516101:18516286
methylatedunmethylatedunknownpositionproportionpatterns1234518516101185161431851618318516218185162341851624718516252185162791851628620406080100120read count

chr3:26036528-26042769:-:L1HS:REF

chr3 26042570:26042749
methylatedunmethylatedunknownpositionproportionpatterns12345678910260425702604257926042604260426672604269826042707260427102604274951015202530read count

chr3:26398017-26404045:-:L1HS:REF

chr3 26403844:26404028
methylatedunmethylatedunknownpositionproportionpatterns12345678910264038442640388326403885264038892640389426403912264039472640398626403989264039952640402851015read count

chr3:29108111-29112113:-:L1HS:REF

chr3 29111933:29112094
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212229111933291119432911194829111954291119592911197729112043291120522911205529112061291120782911209451015read count

chr3:35454617-35458296:+:L1HS:REF

chr3 35454630:35454816
methylatedunmethylatedunknownpositionproportionpatterns123456789101135454630354546633545466935454713354547663545477535454782354548093545481651015202530read count

chr3:46783105-46789138:-:L1HS:REF

chr3 46788933:46789118
methylatedunmethylatedunknownpositionproportionpatterns1234567891011467889334678895746788967467889724678897446788978467889834678900146789036467890674678907646789079467890854678910246789118246810read count

chr3:54394322-54400323:-:L1HS:REF

chr3 54400121:54400306
methylatedunmethylatedunknownpositionproportionpatterns12345678544001215440014554400155544001605440016254400166544001715440018954400224544002555440026754400273544002905440030651015202530read count

chr3:55754551-55754553:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345622385561647310413915716216616817318320710203040read count

chr3:77763677-77769678:-:L1HS:REF

chr3 77769474:77769658
methylatedunmethylatedunknownpositionproportionpatterns123456777769474777694977776950777769512777695147776951877769541777695767776960777769619777696257776964277769658102030read count

chr3:80541011-80541013:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345672238556164731041391571621661681731832072468read count

chr3:82337499-82339442:+:L1HS:REF

chr3 82337499:82337705
methylatedunmethylatedunknownpositionproportionpatterns12345678982337499823375368233755982337562823376028233763782337653823376558233766082337664823376668233767182337681823377055101520read count

chr3:89460825-89466856:-:L1HS:REF

chr3 89466652:89466836
methylatedunmethylatedunknownpositionproportionpatterns123456789466652894666768946668689466691894666938946669789466702894667208946675589466785894667948946679789466803894668208946683620406080100120140read count

chr3:90169567-90175598:-:L1HS:REF

chr3 90175417:90175578
methylatedunmethylatedunknownpositionproportionpatterns1234590175417901754329017543490175438901754439017546190175496901755369017553990175545901755629017557820406080read count

chr3:103556537-103562569:-:L1HS:REF

chr3 103562364:103562549
methylatedunmethylatedunknownpositionproportionpatterns1234561035623641035623981035624031035624051035624091035624141035624321035624671035624981035625071035625101035625161035625331035625491020304050read count

chr3:108749400-108755425:+:L1HS:REF

chr3 108749400:108749599
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223241087494001087494141087494301087494471087494531087494561087494651087494961087495311087495491087495581087495601087495651087495751087495992468read count

chr3:109199872-109205903:+:L1HS:REF

chr3 109199872:109200077
methylatedunmethylatedunknownpositionproportionpatterns12345678910109199872109199893109199909109199926109199932109199935109199944109200009109200027109200032109200036109200038109200043109200053109200077510152025read count

chr3:110888814-110890548:+:L1HS:REF

chr3 110888833:110889017
methylatedunmethylatedunknownpositionproportionpatterns123411088883311088885011088886611088887211088887511088888411088891411088896511088896711088897211088897611088897811088898311088899311088901720406080read count

chr3:116359999-116366026:+:L1HS:REF

chr3 116360017:116360201
methylatedunmethylatedunknownpositionproportionpatterns1234511636001711636003311636005011636005611636005911636006811636013311636015111636015611636016011636016211636016711636017711636020120406080read count

chr3:120573021-120579186:+:L1HS:REF

chr3 120573034:120573186
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151612057303412057305012057307312057307612057308512057311612057315112057315312057317512057318651015read count

chr3:123871878-123871880:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567223855616473104139157162166168173183207204060read count

chr3:132946006-132952034:-:L1HS:REF

chr3 132951831:132952016
methylatedunmethylatedunknownpositionproportionpatterns12345671329518311329518551329518651329518701329518721329518761329518811329518991329519341329519541329519651329519741329519771329519831329520001329520161020304050read count

chr3:135002247-135005976:-:L1HS:REF

chr3 135005787:135005965
methylatedunmethylatedunknownpositionproportionpatterns12345671350057871350058141350058191350058211350058251350058321350058481350059261350059491350059651.01.52.02.53.0read count

chr3:136479056-136485103:-:L1HS:REF

chr3 136484898:136485083
methylatedunmethylatedunknownpositionproportionpatterns12345136484898136484922136484932136484937136484939136484943136484948136484950136485001136485032136485041136485044136485050136485067136485083204060read count

chr3:136963693-136969736:-:L1HS:REF

chr3 136969518:136969716
methylatedunmethylatedunknownpositionproportionpatterns123456713696951813696954213696955213696955713696955913696956313696956813696958613696962113696965213696966113696966413696967013696968713696971650100150read count

chr3:139325613-139325615:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678223855616473104139157162166168173183207510152025read count

chr3:139590956-139596035:+:L1HS:REF

chr3 139590976:139591161
methylatedunmethylatedunknownpositionproportionpatterns123456713959097613959099213959101513959102713959105813959109313959111113959111613959112013959112213959112713959113713959116120406080100120read count

chr3:158019676-158025704:+:L1HS:REF

chr3 158019697:158019882
methylatedunmethylatedunknownpositionproportionpatterns1234567158019697158019713158019736158019739158019748158019779158019814158019832158019837158019841158019843158019848158019858158019882102030read count

chr3:159095379-159101394:-:L1HS:REF

chr3 159101190:159101374
methylatedunmethylatedunknownpositionproportionpatterns1234567891011159101190159101214159101224159101229159101231159101235159101240159101258159101293159101323159101332159101335159101358159101374246810read count

chr3:163236941-163242962:+:L1HS:REF

chr3 163236941:163237141
methylatedunmethylatedunknownpositionproportionpatterns123456716323694116323695616323697216323698916323699516323699816323700716323703816323707316323709116323709616323710016323710216323710716323711716323714124681012read count

chr3:164291525-164296426:+:L1HS:REF

chr3 164291546:164291731
methylatedunmethylatedunknownpositionproportionpatterns12345678910164291546164291585164291588164291679164291681164291686164291688164291690164291692164291697164291724164291731510152025read count

chr3:169552175-169552177:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234223855616473104139157162166168173183207204060read count

chr3:190964647-190965526:-:L1HS:REF

chr3 190965339:190965524
methylatedunmethylatedunknownpositionproportionpatterns123451909653391909653461909653731909653781909653841909653891909653911909654071909654421909654731909654821909654851909655081909655241020304050read count

chr4:14755114-14761144:+:L1HS:REF

chr4 14755133:14755318
methylatedunmethylatedunknownpositionproportionpatterns123456789147551331475514914755166147551721475517514755215147552501475526614755268147552791475528414755294147553182468read count

chr4:15841546-15847572:+:L1HS:REF

chr4 15841546:15841752
methylatedunmethylatedunknownpositionproportionpatterns123456789158415461584154915841567158415831584160015841606158416091584161815841649158416841584170715841711158417131584171815841728158417525101520read count

chr4:16942776-16944630:+:L1HS:REF

chr4 16942795:16942979
methylatedunmethylatedunknownpositionproportionpatterns1234567816942795169428111694282816942834169428371694284616942876169429111694292916942934169429381694294016942945169429551694297912345read count

chr4:21159390-21165421:+:L1HS:REF

chr4 21159411:21159595
methylatedunmethylatedunknownpositionproportionpatterns12321159411211594272115944421159450211594532115946221159492211595272115954521159550211595542115955621159561211595712115959512345read count

chr4:23614771-23620793:+:L1HS:REF

chr4 23614792:23614978
methylatedunmethylatedunknownpositionproportionpatterns123456236147922361480823614825236148342361487523614910236149282361493323614937236149392361494423614954236149785101520read count

chr4:48051954-48057974:-:L1HS:REF

chr4 48057781:48057966
methylatedunmethylatedunknownpositionproportionpatterns12345678480577814805781548057820480578224805782648057833480578494805788448057915480579244805792748057933480579504805796610203040read count

chr4:52538471-52544498:+:L1HS:REF

chr4 52538490:52538675
methylatedunmethylatedunknownpositionproportionpatterns123456525384905253850652538523525385295253853252538541525386075253863052538634525386365253864152538651525386751020304050read count

chr4:52816456-52822486:+:L1HS:REF

chr4 52816477:52816662
methylatedunmethylatedunknownpositionproportionpatterns123456785281647752816493528165105281651652816519528165285281655952816594528166125281661752816621528166235281662852816638528166621020304050read count

chr4:57562316-57568347:-:L1HS:REF

chr4 57568142:57568327
methylatedunmethylatedunknownpositionproportionpatterns1234565756814257568166575681765756818157568183575681875756819257568210575682455756828557568288575682945756831157568327123456read count

chr4:61939927-61945962:-:L1HS:REF

chr4 61945757:61945942
methylatedunmethylatedunknownpositionproportionpatterns12345619457576194578161945791619457966194579861945802619458076194582561945860619458916194590061945903619459096194594220406080100120read count

chr4:62726948-62732969:-:L1HS:REF

chr4 62732765:62732950
methylatedunmethylatedunknownpositionproportionpatterns1234566273276562732789627327996273280462732806627328106273281562732833627328686273289962732908627329116273291762732950102030read count

chr4:69664009-69667565:+:L1HS:REF

chr4 69664029:69664207
methylatedunmethylatedunknownpositionproportionpatterns1234696640296966404569664062696640686966408069664111696641626966416469664173696641756966420720406080read count

chr4:70015396-70019676:-:L1HS:REF

chr4 70019471:70019640
methylatedunmethylatedunknownpositionproportionpatterns123456789700194717001949570019505700195217001957470019605700196177001962370019640510152025read count

chr4:74717539-74723587:-:L1HS:REF

chr4 74723382:74723567
methylatedunmethylatedunknownpositionproportionpatterns12345678974723382747234067472341674723423747234277472343274723450747234857472351674723525747235287472353474723551747235671020304050read count

chr4:78105735-78111765:+:L1HS:REF

chr4 78105755:78105940
methylatedunmethylatedunknownpositionproportionpatterns12345678105755781057717810578878105794781057977810580678105837781058727810588878105890781058957810589978105901781059067810594050100read count

chr4:79704552-79710581:+:L1HS:REF

chr4 79704570:79704755
methylatedunmethylatedunknownpositionproportionpatterns1234567879704570797045867970460379704609797046127970462179704652797046877970470379704705797047107970471479704716797047217970473179704755102030read count

chr4:79937715-79943746:+:L1HS:REF

chr4 79937734:79937918
methylatedunmethylatedunknownpositionproportionpatterns123456799377347993775079937767799377737993777679937785799378157993785079937868799378737993787979937884799378947993791820406080read count

chr4:87347103-87353146:-:L1HS:REF

chr4 87352942:87353126
methylatedunmethylatedunknownpositionproportionpatterns1234567887352942873529668735297687352981873529838735298787352992873530108735304587353075873530848735308787353093873531108735312620406080100read count

chr4:91437491-91443691:+:L1HS:REF

chr4 91437510:91437696
methylatedunmethylatedunknownpositionproportionpatterns12345678991437510914375269143754391437549914375619143762791437646914376559143766291437672914376961020304050read count

chr4:91978211-91984413:+:L1HS:REF

chr4 91978211:91978393
methylatedunmethylatedunknownpositionproportionpatterns123456789197821191978232919782489197826591978271919782839197834991978367919783729197837691978378919783839197839320406080read count

chr4:93608283-93614338:-:L1HS:REF

chr4 93614133:93614318
methylatedunmethylatedunknownpositionproportionpatterns1234593614133936141579361417293614174936141789361418393614201936142679361427693614279936142859361430293614318102030405060read count

chr4:98592435-98598463:-:L1HS:REF

chr4 98598258:98598443
methylatedunmethylatedunknownpositionproportionpatterns123456789985982589859828298598292985982979859829998598303985983089859832698598361985983929859840198598404985984109859842798598443246810read count

chr4:106571057-106577070:-:L1HS:REF

chr4 106576868:106577053
methylatedunmethylatedunknownpositionproportionpatterns12310657686810657689210657690210657690710657690910657691310657691810657693610657700210657701110657701410657702010657703710657705320406080100read count

chr4:110690112-110693684:-:L1HS:REF

chr4 110693489:110693667
methylatedunmethylatedunknownpositionproportionpatterns12345671106934891106935061106935211106935271106935321106935341106935851106936251106936281106936671020304050read count

chr4:111894801-111900831:+:L1HS:REF

chr4 111894820:111895005
methylatedunmethylatedunknownpositionproportionpatterns12345611189482011189483611189485311189485911189486211189490211189493711189495311189496011189496611189497111189498111189500550100150read count

chr4:119948726-119954758:-:L1HS:REF

chr4 119954577:119954738
methylatedunmethylatedunknownpositionproportionpatterns1234567811995457711995459211995459411995459811995460311995462111995465611995468711995469611995469911995470511995472211995473850100150200read count

chr4:135178140-135183747:-:L1HS:REF

chr4 135183555:135183733
methylatedunmethylatedunknownpositionproportionpatterns123456135183555135183587135183589135183593135183598135183612135183616135183651135183682135183694135183700135183717135183733204060read count

chr4:136293494-136299546:-:L1HS:REF

chr4 136299344:136299528
methylatedunmethylatedunknownpositionproportionpatterns1234567136299344136299368136299378136299383136299385136299389136299394136299412136299447136299477136299486136299489136299495136299512136299528204060read count

chr4:137496278-137500000:+:L1HS:REF

chr4 137496287:137496472
methylatedunmethylatedunknownpositionproportionpatterns1234513749628713749630313749632013749632613749632913749633813749636913749640413749642013749642213749642613749643313749643813749644813749647220406080read count

chr4:144809658-144810951:+:L1HS:REF

chr4 144809679:144809864
methylatedunmethylatedunknownpositionproportionpatterns12345678144809679144809712144809718144809730144809761144809796144809812144809814144809819144809823144809825144809830144809840144809864510152025read count

chr4:166449405-166449678:-:L1HS:REF

chr4 166449477:166449662
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121664494771664495011664495111664495161664495181664495221664495271664495451664495801664496111664496201664496231664496461664496621234567read count

chr4:166569976-166576007:+:L1HS:REF

chr4 166569997:166570181
methylatedunmethylatedunknownpositionproportionpatterns12345678910111216656999716657001316657003016657003616657003916657007816657011316657013116657013616657014016657014216657014716657015716657018124681012read count

chr4:166850455-166851634:+:L1HS:REF

chr4 166850455:166850659
methylatedunmethylatedunknownpositionproportionpatterns12316685045516685047416685050716685051616685055616685058716685060716685061416685061816685062016685063516685065216685065912345read count

chr4:169515501-169521532:-:L1HS:REF

chr4 169521328:169521512
methylatedunmethylatedunknownpositionproportionpatterns123416952132816952135116952136116952136616952136816952137216952137716952139516952143016952146116952147016952147316952147916952149616952151250100150read count

chr5:4500001-4502372:-:L1HS:REF

chr5 4502167:4502352
methylatedunmethylatedunknownpositionproportionpatterns12345678450216745021914502201450221245022174502219450223545022704502301450231045023364502352510152025read count

chr5:15906515-15912550:-:L1HS:REF

chr5 15912346:15912515
methylatedunmethylatedunknownpositionproportionpatterns12345678159123461591237015912380159123851591238715912391159123961591241415912449159124801591248915912492159124981591251524681012read count

chr5:34147845-34154031:+:L1HS:REF

chr5 34147845:34148048
methylatedunmethylatedunknownpositionproportionpatterns12343414784534147864341478803414789734147903341479063414791534147945341479803414799834148007341480093414801434148048204060read count

chr5:52086499-52088220:-:L1HS:REF

chr5 52088022:52088209
methylatedunmethylatedunknownpositionproportionpatterns1234567891011520880225208803952088054520880565208806552088083520881495208820951015202530read count

chr5:66750283-66754219:+:L1HS:REF

chr5 66750304:66750488
methylatedunmethylatedunknownpositionproportionpatterns12346675030466750337667503436675034666750355667503856675042066750436667504436675044966750454667504646675048820406080read count

chr5:79778884-79784938:-:L1HS:REF

chr5 79784739:79784924
methylatedunmethylatedunknownpositionproportionpatterns123456779784739797847637978477379784778797847847978478979784791797848077978484279784873797848827978488579784891797849087978492420406080read count

chr5:81616090-81622140:+:L1HS:REF

chr5 81616109:81616294
methylatedunmethylatedunknownpositionproportionpatterns1234581616109816161258161614281616148816161518161616081616191816162268161624481616249816162538161625581616260816162708161629420406080100120read count

chr5:86510690-86516743:+:L1HS:REF

chr5 86510711:86510896
methylatedunmethylatedunknownpositionproportionpatterns1234567865107118651074486510750865107538651076286510793865108288651084686510851865108558651085786510862865108728651089610203040read count

chr5:90154963-90154965:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456782238556164731041391571621661681731832071020304050read count

chr5:102131356-102137385:+:L1HS:REF

chr5 102131377:102131562
methylatedunmethylatedunknownpositionproportionpatterns12345102131377102131393102131410102131416102131419102131459102131494102131512102131517102131521102131523102131528102131538102131562204060read count

chr5:102189483-102194435:+:L1HS:REF

chr5 102189502:102189687
methylatedunmethylatedunknownpositionproportionpatterns1234567891021895021021895181021895351021895411021895441021895531021895841021896191021896371021896421021896461021896481021896531021896631021896872468101214read count

chr5:104518587-104524616:+:L1HS:REF

chr5 104518607:104518791
methylatedunmethylatedunknownpositionproportionpatterns1234567104518607104518640104518646104518649104518658104518688104518723104518741104518750104518752104518757104518767104518791510152025read count

chr5:105513236-105519274:-:L1HS:REF

chr5 105519069:105519254
methylatedunmethylatedunknownpositionproportionpatterns123456105519069105519093105519103105519108105519114105519119105519137105519172105519203105519212105519215105519221105519238105519254204060read count

chr5:109259387-109265418:+:L1HS:REF

chr5 109259408:109259592
methylatedunmethylatedunknownpositionproportionpatterns1234567109259408109259424109259441109259447109259450109259459109259489109259524109259542109259547109259551109259553109259558109259568109259592204060read count

chr5:110144555-110144557:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011122238556164731041391571621661681731832071234567read count

chr5:111302238-111308262:+:L1HS:REF

chr5 111302252:111302437
methylatedunmethylatedunknownpositionproportionpatterns12345611130225211130226811130228511130229111130229411130230311130233411130236911130238711130239211130239611130240311130241311130243710203040read count

chr5:116113364-116113366:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456722385561647310413915716216616817318320720406080read count

chr5:119684785-119690814:-:L1HS:REF

chr5 119690612:119690797
methylatedunmethylatedunknownpositionproportionpatterns12345678910111196906121196906361196906461196906511196906531196906571196906641196906801196907151196907551196907811196907975101520read count

chr5:133583288-133589299:+:L1HS:REF

chr5 133583306:133583489
methylatedunmethylatedunknownpositionproportionpatterns1234567891335833061335833221335833391335833451335833481335833571335833881335834231335834391335834441335834481335834501335834551335834651335834892468read count

chr5:146609485-146615534:+:L1HS:REF

chr5 146609500:146609685
methylatedunmethylatedunknownpositionproportionpatterns114660950014660951614660953314660953914660954214660955114660958214660961714660963514660964014660964414660964614660965114660966114660968512345read count

chr5:152886441-152892473:-:L1HS:REF

chr5 152892268:152892453
methylatedunmethylatedunknownpositionproportionpatterns123451528922681528922921528923021528923071528923091528923361528923711528924021528924111528924141528924201528924371528924531.01.52.02.53.03.54.0read count

chr5:153070982-153077008:-:L1HS:REF

chr5 153076809:153076994
methylatedunmethylatedunknownpositionproportionpatterns12345671530768091530768331530768431530768481530768501530768541530768771530769121530769431530769521530769551530769611530769781530769941.01.52.02.53.03.54.0read count

chr5:156061919-156067966:-:L1HS:REF

chr5 156067762:156067946
methylatedunmethylatedunknownpositionproportionpatterns1234561560677621560677861560677961560678011560678031560678071560678121560678301560678651560678951560679041560679071560679131560679301560679461020304050read count

chr5:160709608-160715639:-:L1HS:REF

chr5 160715436:160715621
methylatedunmethylatedunknownpositionproportionpatterns12345616071543616071546016071547016071547516071547716071548116071548616071550416071553916071557016071557916071558216071558816071560516071562151015read count

chr5:162530742-162531677:-:L1HS:REF

chr5 162531476:162531644
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213162531476162531517162531579162531600162531609162531621162531644102030read count

chr5:166141191-166145692:-:L1HS:REF

chr5 166145506:166145691
methylatedunmethylatedunknownpositionproportionpatterns123456789101116614550616614554016614554516614554716614555216614555616614555816614557416614560916614564016614564916614565216614565816614567516614569124681012read count

chr5:166966760-166972815:-:L1HS:REF

chr5 166972613:166972798
methylatedunmethylatedunknownpositionproportionpatterns12345616697261316697263716697264716697265216697265416697265816697266316697268116697271616697275616697275916697276516697278216697279851015read count

chr5:173402796-173408828:-:L1HS:REF

chr5 173408623:173408808
methylatedunmethylatedunknownpositionproportionpatterns12345617340862317340864717340865717340866217340866417340866817340867317340869117340872617340875717340876617340876917340877517340879217340880820406080100read count

chr6:2417774-2423803:-:L1HS:REF

chr6 2423598:2423783
methylatedunmethylatedunknownpositionproportionpatterns1234524235982423622242363224236372423639242364324236482423666242370124237322423741242374424237502423767242378320406080100read count

chr6:69495362-69500000:+:L1HS:REF

chr6 69495422:69495534
methylatedunmethylatedunknownpositionproportionpatterns123456789106949542269495425694954656949551669495523694955341020304050read count

chr6:70010347-70016552:+:L1HS:REF

chr6 70010347:70010552
methylatedunmethylatedunknownpositionproportionpatterns123456787001034770010368700103847001040170010407700104107001041970010449700104847001050270010507700105117001051370010517700105287001055220406080read count

chr6:72988654-72994686:-:L1HS:REF

chr6 72994481:72994666
methylatedunmethylatedunknownpositionproportionpatterns12345729944817299450572994520729945227299452672994531729945497299458472994615729946247299462772994633729946507299466620406080100120read count

chr6:76875759-76877075:-:L1HS:REF

chr6 76876870:76877039
methylatedunmethylatedunknownpositionproportionpatterns1276876870768768947687690476876911768769157687692076876938768769737687700476877013768770227687703920406080read count

chr6:83333952-83339981:+:L1HS:REF

chr6 83333973:83334158
methylatedunmethylatedunknownpositionproportionpatterns123458333397383334006833340128333401583334024833340558333409083334106833341138333411783334119833341248333413483334158204060read count

chr6:86000000-86005073:-:L1HS:REF

chr6 86004869:86005053
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141586004869860048938600490386004908860049108600491486004915860049198600493786004972860050028600501186005014860050208600503786005053read count

chr6:93865738-93871783:-:L1HS:REF

chr6 93871578:93871763
methylatedunmethylatedunknownpositionproportionpatterns1234569387157893871602938716129387161793871619938716469387168193871712938717219387172493871730938717479387176320406080read count

chr6:94197995-94204060:-:L1HS:REF

chr6 94203855:94204040
methylatedunmethylatedunknownpositionproportionpatterns12345694203855942038799420388994203894942038969420390094203905942039239420395894203989942039989420400194204007942040249420404020406080read count

chr6:98703059-98708329:+:L1HS:REF

chr6 98703077:98703262
methylatedunmethylatedunknownpositionproportionpatterns12345987030779870309398703110987031169870311998703128987031309870315998703194987032109870321798703221987032239870322898703238987032621020304050read count

chr6:112703745-112709778:+:L1HS:REF

chr6 112703766:112703951
methylatedunmethylatedunknownpositionproportionpatterns1234511270376611270378211270379911270380511270380811270384811270388311270390111270390611270391011270391211270391711270392711270395150100150read count

chr6:117102131-117108163:+:L1HS:REF

chr6 117102152:117102313
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181171021521171021681171021851171021911171021941171022031171022341171022871171022961171022981171023031171023131234567read count

chr6:121162716-121168725:+:L1HS:REF

chr6 121162730:121162915
methylatedunmethylatedunknownpositionproportionpatterns1234512116273012116276312116276912116277212116281212116284712116286512116287012116287412116287612116288112116289112116291520406080100read count

chr6:128998385-129000000:+:L1HS:REF

chr6 128998406:128998590
methylatedunmethylatedunknownpositionproportionpatterns123456789101289984061289984221289984451289984481289984571289984871289985221289985401289985451289985491289985511289985561289985661289985901.01.52.02.53.0read count

chr6:142128962-142128964:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345223861647310413915716216616817318320720406080100read count

chr6:156034135-156040165:+:L1HS:REF

chr6 156034156:156034340
methylatedunmethylatedunknownpositionproportionpatterns123456789101115603415615603417215603418915603419515603419815603420715603423715603427215603429015603429515603429915603430615603434051015read count

chr6:156324980-156331010:-:L1HS:REF

chr6 156330805:156330990
methylatedunmethylatedunknownpositionproportionpatterns1234567815633080515633082915633083915633084415633084615633085015633085515633087315633090815633093915633095115633095715633097415633099020406080read count

chr7:7465092-7471120:+:L1HS:REF

chr7 7465092:7465297
methylatedunmethylatedunknownpositionproportionpatterns12345678974650927465113746512974651467465152746515574651647465195746523074652337465248746525374652577465259746526474652747465297102030read count

chr7:8351723-8353975:+:L1HS:REF

chr7 8351743:8351929
methylatedunmethylatedunknownpositionproportionpatterns123456783517438351783835178683517958351826835186183518798351890835190383519058351922835192920406080100120read count

chr7:8847084-8847086:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456722385561647310413915716216616817318320712345read count

chr7:12497211-12500000:+:L1HS:REF

chr7 12497232:12497417
methylatedunmethylatedunknownpositionproportionpatterns1231249723212497248124972711249727412497283124973141249736512497372124973761249737812497393124974101249741750100150200read count

chr7:25041860-25047891:-:L1HS:REF

chr7 25047686:25047871
methylatedunmethylatedunknownpositionproportionpatterns12345250476862504771025047720250477252504772725047731250477362504775425047768250477892504782025047829250478322504785525047871102030read count

chr7:30439242-30445274:+:L1HS:REF

chr7 30439263:30439448
methylatedunmethylatedunknownpositionproportionpatterns1234567830439263304392793043929630439302304393053043931430439345304393663043938030439396304393983043940330439407304394093043941430439424304394481020304050read count

chr7:49680245-49686300:-:L1HS:REF

chr7 49686097:49686281
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171849686097496861214968613149686136496861384968614249686143496861474968616549686200496862304968623949686242496862484968626549686281246810read count

chr7:57539590-57540834:+:L1HS:REF

chr7 57539647:57539790
methylatedunmethylatedunknownpositionproportionpatterns1234565753964757539656575397455753974957539756575397835753979020406080read count

chr7:63148831-63154859:-:L1HS:REF

chr7 63154654:63154839
methylatedunmethylatedunknownpositionproportionpatterns123456631546546315467863154688631546936315469563154699631547046315470663154722631547576315478863154797631548006315480663154823631548395101520read count

chr7:66286853-66292884:-:L1HS:REF

chr7 66292679:66292864
methylatedunmethylatedunknownpositionproportionpatterns123456662926796629270366292713662927186629272066292724662927296629274766292782662928136629282266292825662928316629284866292864102030405060read count

chr7:70197328-70203357:+:L1HS:REF

chr7 70197349:70197534
methylatedunmethylatedunknownpositionproportionpatterns123456770197349701973657019738270197388701973917019740070197431701974667019748470197489701974937019749570197500701975107019753420406080read count

chr7:91173443-91179517:+:L1HS:REF

chr7 91173463:91173624
methylatedunmethylatedunknownpositionproportionpatterns1234911734639117347991173505911735459117358091173603911736079117360991173614911736242468read count

chr7:93787624-93793679:-:L1HS:REF

chr7 93793474:93793659
methylatedunmethylatedunknownpositionproportionpatterns123456937934749379349893793508937935139379351993793524937935429379357793793608937936179379362093793626937936439379365920406080100read count

chr7:97613656-97619688:+:L1HS:REF

chr7 97613677:97613862
methylatedunmethylatedunknownpositionproportionpatterns123459761367797613692976137109761371697613719976137289761375997613794976138129761381797613821976138239761382897613862204060read count

chr7:108188818-108188820:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123422385561647310413915716216616817318320720406080read count

chr7:110707004-110713024:-:L1HS:REF

chr7 110712831:110713016
methylatedunmethylatedunknownpositionproportionpatterns12345611071283111071286511071287011071287211071288111071289911071293411071296511071297411071298311071300011071301651015202530read count

chr7:111243515-111249546:-:L1HS:REF

chr7 111249342:111249526
methylatedunmethylatedunknownpositionproportionpatterns1234567111249342111249366111249376111249381111249383111249387111249392111249410111249445111249475111249484111249487111249493111249510111249526102030405060read count

chr7:111963193-111969223:+:L1HS:REF

chr7 111963214:111963399
methylatedunmethylatedunknownpositionproportionpatterns123411196321411196323011196324711196325311196325611196329611196333111196334911196335411196335811196336011196337511196339920406080read count

chr7:113776122-113782152:-:L1HS:REF

chr7 113781948:113782132
methylatedunmethylatedunknownpositionproportionpatterns12345671137819481137819721137819821137819871137819891137819931137819981137820161137820511137820811137820901137820931137820991137821161137821171137821321.01.52.02.53.03.54.0read count

chr7:125179570-125181978:-:L1HS:REF

chr7 125181774:125181959
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141251817741251817981251818081251818131251818151251818191251818421251818771251819081251819201251819261251819431251819591234567read count

chr7:141062014-141068042:-:L1HS:REF

chr7 141067837:141068022
methylatedunmethylatedunknownpositionproportionpatterns1234561410678371410678611410678711410678781410678821410678871410678891410679051410679401410679711410679801410679831410679891410680221020304050read count

chr7:141920659-141926712:-:L1HS:REF

chr7 141926508:141926692
methylatedunmethylatedunknownpositionproportionpatterns12345614192650814192653214192654214192654714192654914192655314192655814192657614192661114192664114192665014192665314192665914192667614192669212345read count

chr7:147842591-147848623:-:L1HS:REF

chr7 147848418:147848603
methylatedunmethylatedunknownpositionproportionpatterns12345671478484181478484421478484521478484571478484631478484681478484861478485211478485521478485611478485701478485871478486032468101214read count

chr7:150597094-150602628:+:L1HS:REF

chr7 150597154:150597197
methylatedunmethylatedunknownpositionproportionpatterns1215059715415059716615059719751015202530read count

chr8:8470859-8476906:+:L1HS:REF

chr8 8470880:8471065
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314847088084708968470913847091984709228470931847096284710138471015847102084710248471026847103184710418471065246810read count

chr8:27113618-27119645:+:L1HS:REF

chr8 27113635:27113820
methylatedunmethylatedunknownpositionproportionpatterns123456271136352711365127113668271136742711367727113686271137172711375227113770271137752711377927113781271137862711379627113820123456read count

chr8:56249347-56249349:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678910112238556164731041391571621661681731832075101520read count

chr8:72875538-72881588:-:L1HS:REF

chr8 72881387:72881571
methylatedunmethylatedunknownpositionproportionpatterns123456772881387728814117288142172881426728814287288143272881437728814557288149072881520728815297288153272881538728815557288157151015202530read count

chr8:75621331-75627355:-:L1HS:REF

chr8 75627151:75627336
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516177562715175627185756271907562719275627196756272197562723875627254756272857562729475627297756273207562733624681012read count

chr8:88685705-88691760:+:L1HS:REF

chr8 88685705:88685911
methylatedunmethylatedunknownpositionproportionpatterns12345678910111288685705886857428868575988685765886857688868577788685808886858438868586188685870886858728868587788685887886859111.01.52.02.53.0read count

chr8:91522091-91528121:-:L1HS:REF

chr8 91527919:91528087
methylatedunmethylatedunknownpositionproportionpatterns123456791527919915279439152795391527958915279609152796491527969915279879152802291528052915280619152806491528070915280872468101214read count

chr8:104739851-104745873:-:L1HS:REF

chr8 104745668:104745853
methylatedunmethylatedunknownpositionproportionpatterns1234510474566810474569210474570710474571310474571810474573610474577110474580210474581110474581410474582010474583010474583710474585310203040read count

chr8:121329878-121334807:-:L1HS:REF

chr8 121334614:121334799
methylatedunmethylatedunknownpositionproportionpatterns1231213346141213346211213346381213346481213346641213346661213346821213347171213347481213347571213347601213347661213347831213347995101520read count

chr8:127311575-127315431:+:L1HS:REF

chr8 127311575:127311739
methylatedunmethylatedunknownpositionproportionpatterns12345678127311575127311611127311628127311634127311637127311639127311668127311677127311730127311735127311739102030read count

chr8:134070756-134076773:-:L1HS:REF

chr8 134076570:134076754
methylatedunmethylatedunknownpositionproportionpatterns12345671340765701340765941340766041340766091340766111340766151340766201340766381340766731340767031340767121340767151340767211340767381340767541.01.21.41.61.82.0read count

chr8:135875862-135881890:+:L1HS:REF

chr8 135875883:135876068
methylatedunmethylatedunknownpositionproportionpatterns1234561358758831358758991358759221358759251358759341358759651358760001358760181358760231358760271358760291358760341358760441358760681.01.52.02.53.03.54.0read count

chr8:136438074-136444105:-:L1HS:REF

chr8 136443900:136444085
methylatedunmethylatedunknownpositionproportionpatterns12345613644390013644392413644393413644393913644394113644394513644395013644396813644403413644404313644404613644405213644406913644408524681012read count

chr9:5491417-5491419:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192021222324223855616473104139157162166168173183207246810read count

chr9:18584294-18584296:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213142238556164731041391571621661681731832072468101214read count

chr9:20655632-20658802:-:L1HS:REF

chr9 20658600:20658784
methylatedunmethylatedunknownpositionproportionpatterns1232065860020658624206586342065863920658641206586452065866820658703206587332065874520658751206587682065878420406080read count

chr9:63913382-63916426:+:L1HS:REF

chr9 63913400:63913578
methylatedunmethylatedunknownpositionproportionpatterns1234567891063913400639134396391344263913517639135446391357824681012read count

chr9:83049539-83055571:-:L1HS:REF

chr9 83055366:83055551
methylatedunmethylatedunknownpositionproportionpatterns123483055366830553908305540083055405830554078305541183055416830554188305543483055446830554538305546983055500830555098305551283055518830555358305555120406080100read count

chr9:87276756-87276758:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819202122385561647310413915716216616817318320751015read count

chr9:90149604-90155634:+:L1HS:REF

chr9 90149624:90149809
methylatedunmethylatedunknownpositionproportionpatterns123456789109014962490149640901496579014966390149666901496759014970690149741901497599014976490149770901497759014978590149809510152025read count

chr9:94113535-94119565:-:L1HS:REF

chr9 94119361:94119546
methylatedunmethylatedunknownpositionproportionpatterns1234594119361941193859411939594119400941194029411940694119411941194299411946494119495941195049411950794119513941195309411954620406080100read count

chr9:95697585-95703604:+:L1HS:REF

chr9 95697600:95697785
methylatedunmethylatedunknownpositionproportionpatterns12345678956976009569761695697633956976399569764295697651956976829569771795697735956977409569774695697751956977619569778510203040read count

chr9:99498741-99500000:+:L1HS:REF

chr9 99498761:99498946
methylatedunmethylatedunknownpositionproportionpatterns1234567899498761994987949949880099498803994988129949884399498878994988949949889699498901994989059949890799498912994989229949894610203040read count

chr9:103237485-103241471:+:L1HS:REF

chr9 103237538:103237690
methylatedunmethylatedunknownpositionproportionpatterns123456781032375381032375471032375561032376381032376491032376511032376561032376841032376881032376905101520read count

chr9:110417102-110423126:+:L1HS:REF

chr9 110417123:110417308
methylatedunmethylatedunknownpositionproportionpatterns12345611041712311041713911041715611041716211041716511041717411041720511041723311041724011041725811041726311041726711041726911041727411041728411041730820406080read count

chr9:110791097-110797129:+:L1HS:REF

chr9 110791118:110791303
methylatedunmethylatedunknownpositionproportionpatterns12345611079111811079113411079115111079115711079116011079116911079120011079123511079125311079125811079126211079126411079126911079127911079130320406080100120read count

chr9:112798107-112804159:-:L1HS:REF

chr9 112803958:112804142
methylatedunmethylatedunknownpositionproportionpatterns12345112803958112803982112803992112803997112803999112804003112804008112804026112804061112804091112804100112804103112804109112804126112804142102030read count

chr10:5245354-5251383:+:L1HS:REF

chr10 5245374:5245559
methylatedunmethylatedunknownpositionproportionpatterns12345678524537452453905245407524541352454165245425524545652454915245509524551452455185245520524552552455355245559246810read count

chr10:19088601-19094618:-:L1HS:REF

chr10 19094413:19094582
methylatedunmethylatedunknownpositionproportionpatterns123451909441319094437190944471909445219094454190944581909448119094516190945471909455619094559190945651909458220406080read count

chr10:25418756-25418758:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234562238556164731041391571621661681731832075101520read count

chr10:33510845-33516876:-:L1HS:REF

chr10 33516672:33516857
methylatedunmethylatedunknownpositionproportionpatterns123456733516672335166963351670633516711335167133351671733516722335167403351677533516806335168153351681833516824335168413351685720406080read count

chr10:37995443-38000000:+:L1HS:REF

chr10 37995478:37995634
methylatedunmethylatedunknownpositionproportionpatterns123453799547837995495379955013799550437995513379955443799557937995595379956003799563420406080read count

chr10:38190899-38190901:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789101112132238556164731041391571621661681731832072468read count

chr10:81441665-81441975:-:L1HS:REF

chr10 81441782:81441967
methylatedunmethylatedunknownpositionproportionpatterns123458144178281441806814418168144182781441832814418348144185081441861814418858144191681441928814419348144196751015202530read count

chr10:85355506-85361538:+:L1HS:REF

chr10 85355527:85355712
methylatedunmethylatedunknownpositionproportionpatterns12345678853555278535554385355560853555668535556985355578853556098535564485355662853556678535567185355678853556888535571224681012read count

chr10:98782941-98788971:-:L1HS:REF

chr10 98788766:98788951
methylatedunmethylatedunknownpositionproportionpatterns12345678987887669878879098788800987888059878881198788816987888699878890098788909987889129878891898788935987889511020304050read count

chr10:105377346-105383377:-:L1HS:REF

chr10 105383173:105383357
methylatedunmethylatedunknownpositionproportionpatterns123456710538317310538319710538320710538321210538321410538321810538322310538324110538330610538331510538331810538332410538334110538335712345read count

chr10:105775520-105781551:-:L1HS:REF

chr10 105781346:105781531
methylatedunmethylatedunknownpositionproportionpatterns12345105781346105781370105781380105781387105781391105781414105781449105781480105781489105781492105781498105781515105781531123456read count

chr10:108310130-108316139:-:L1HS:REF

chr10 108315955:108316124
methylatedunmethylatedunknownpositionproportionpatterns123456710831595510831597910831598910831599410831599610831600010831600710831602310831605810831609810831610110831610710831612451015202530read count

chr10:112237295-112237297:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456782238556164731041391571621661681731832075101520read count

chr10:128826794-128826796:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234562238556164731041391571621661681731832072468read count

chr11:5914493-5918448:+:L1HS:REF

chr11 5914502:5914688
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213591450259145355914584591463859146435914647591468824681012read count

chr11:24327951-24334001:+:L1HS:REF

chr11 24327971:24328155
methylatedunmethylatedunknownpositionproportionpatterns12342432797124327987243280042432801024328013243280222432805224328087243281052432811024328114243281162432812124328131243281555101520read count

chr11:25500009-25502139:-:L1HS:REF

chr11 25501955:25502103
methylatedunmethylatedunknownpositionproportionpatterns12345678910112550195525501958255019682550197325501975255019792550198625502002255020372550206825502086255021031.01.52.02.53.0read count

chr11:31315654-31321680:-:L1HS:REF

chr11 31321476:31321661
methylatedunmethylatedunknownpositionproportionpatterns1234567313214763132150031321510313215153132151731321521313215443132157931321610313216193132162231321628313216453132166120406080100120read count

chr11:36551606-36557636:-:L1HS:REF

chr11 36557432:36557617
methylatedunmethylatedunknownpositionproportionpatterns1234567893655743236557456365574663655747136557473365574773655748236557484365575003655753536557566365575753655757836557584365576013655761751015read count

chr11:48847694-48853724:-:L1HS:REF

chr11 48853519:48853704
methylatedunmethylatedunknownpositionproportionpatterns123456789488535194885355348853558488535644885356948853622488536534885367148853688488537041.01.52.02.53.03.54.0read count

chr11:54849946-54851079:+:L1HS:REF

chr11 54849960:54850145
methylatedunmethylatedunknownpositionproportionpatterns1234567891011548499605484999354849999548500025485004254850077548501005485010454850111548501215485014551015read count

chr11:56103285-56103287:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456722385561647310413915716216616817318320751015read count

chr11:58000000-58000187:-:L1HS:REF

chr11 58000023:58000167
methylatedunmethylatedunknownpositionproportionpatterns1234567891011580000235800002758000050580000855800012558000128580001345800016724681012read count

chr11:78677772-78683802:-:L1HS:REF

chr11 78683599:78683784
methylatedunmethylatedunknownpositionproportionpatterns123456786835997868362378683633786836387868364078683644786836497868365178683667786837027868374278683745786837517868376878683784102030405060read count

chr11:85324758-85330821:+:L1HS:REF

chr11 85324779:85324964
methylatedunmethylatedunknownpositionproportionpatterns123853247798532479585324812853248188532482185324830853248618532489685324914853249198532492385324925853249308532494085324964123456read count

chr11:87340031-87346061:-:L1HS:REF

chr11 87345856:87346041
methylatedunmethylatedunknownpositionproportionpatterns123456873458568734588087345890873458958734589787345901873459068734592487345959873459908734599987346002873460088734602587346041204060read count

chr11:87855849-87855851:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456223855616473104139157162166168173183207246810read count

chr11:90400067-90406098:-:L1HS:REF

chr11 90405894:90406079
methylatedunmethylatedunknownpositionproportionpatterns1234567904058949040591890405928904059359040593990405944904059629040599790406028904060379040604090406046904060639040607951015202530read count

chr11:90966271-90972302:-:L1HS:REF

chr11 90972097:90972282
methylatedunmethylatedunknownpositionproportionpatterns123456789101112909720979097212190972131909721369097213890972142909721659097220090972231909722409097224390972249909722821.01.52.02.53.0read count

chr11:93420986-93427031:+:L1HS:REF

chr11 93420993:93421177
methylatedunmethylatedunknownpositionproportionpatterns1234567899342099393421009934210269342103293421035934210449342107493421109934211279342113293421136934211389342114393421153934211771.01.52.02.53.03.54.0read count

chr11:95436216-95442246:+:L1HS:REF

chr11 95436236:95436420
methylatedunmethylatedunknownpositionproportionpatterns1234954362369543625295436269954362759543627895436287954363179543635295436370954363759543637995436381954363869543639695436420102030405060read count

chr11:108685166-108685556:-:L1HS:REF

chr11 108685353:108685538
methylatedunmethylatedunknownpositionproportionpatterns1234510868535310868537710868538710868539210868539410868539810868540310868542110868545610868548710868549610868550510868552210868553820406080100120140read count

chr11:109177494-109183526:-:L1HS:REF

chr11 109183321:109183506
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920211091833211091833451091833551091833601091833621091833711091833891091834241091834551091834641091834671091834731091835061234567read count

chr11:125536609-125542640:+:L1HS:REF

chr11 125536628:125536813
methylatedunmethylatedunknownpositionproportionpatterns123451255366281255366441255366611255366671255366701255366791255367101255367451255367611255367681255367721255367791255367891255368131020304050read count

chr12:3500000-3505228:-:L1HS:REF

chr12 3505023:3505208
methylatedunmethylatedunknownpositionproportionpatterns1234535050233505047350505735050623505064350506835050733505091350512635051573505166350517535051923505208102030read count

chr12:28073478-28073480:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678922385561647310413915716616817318320710203040read count

chr12:33864388-33864390:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12342238556164731041391571621661681731832071.01.21.41.61.82.0read count

chr12:38799646-38805673:+:L1HS:REF

chr12 38799664:38799849
methylatedunmethylatedunknownpositionproportionpatterns12343879966438799680387996973879970338799706387997153879974638799781387997973879979938799804387998083879981038799815387998253879984920406080read count

chr12:44108220-44114234:-:L1HS:REF

chr12 44114029:44114214
methylatedunmethylatedunknownpositionproportionpatterns123456784411402944114053441140634411406844114070441140744411407944114097441141324411416344114172441141754411418144114198441142141020304050read count

chr12:51562631-51568657:-:L1HS:REF

chr12 51568456:51568637
methylatedunmethylatedunknownpositionproportionpatterns12351568456515684765156848651568491515684935156849751568502515685205156855551568586515685955156859851568604515686215156863751015202530read count

chr12:54788573-54794627:+:L1HS:REF

chr12 54788573:54788776
methylatedunmethylatedunknownpositionproportionpatterns12345678547885735478859154788607547886245478863054788633547886425478867354788708547887265478873154788735547887375478874254788752547887762468read count

chr12:55096256-55102283:-:L1HS:REF

chr12 55102078:55102263
methylatedunmethylatedunknownpositionproportionpatterns12345678955102078551021025510211755102119551021235510214655102181551022125510222155102224551022305510224755102263123456read count

chr12:69773410-69779441:-:L1HS:REF

chr12 69779236:69779421
methylatedunmethylatedunknownpositionproportionpatterns1234569779236697792606977927069779275697792776977928169779286697793046977933969779370697793796977938269779388697794056977942120406080read count

chr12:73283667-73289668:-:L1HS:REF

chr12 73289487:73289648
methylatedunmethylatedunknownpositionproportionpatterns12345677328948773289497732895027328950473289513732895317328956673289597732896067328960973289632732896481020304050read count

chr12:74874868-74880901:+:L1HS:REF

chr12 74874889:74875074
methylatedunmethylatedunknownpositionproportionpatterns123456748748897487492274874928748749317487494074874971748750067487502474875029748750337487503574875040748750507487507420406080100read count

chr12:101146043-101152064:+:L1HS:REF

chr12 101146043:101146249
methylatedunmethylatedunknownpositionproportionpatterns12345678101146043101146080101146097101146103101146106101146146101146181101146183101146197101146208101146215101146225101146249246810read count

chr12:108996947-109000000:+:L1HS:REF

chr12 108996968:108997153
methylatedunmethylatedunknownpositionproportionpatterns12345108996968108996984108997001108997007108997019108997050108997085108997101108997108108997112108997114108997119108997129108997153510152025read count

chr12:126299023-126305038:-:L1HS:REF

chr12 126304837:126305021
methylatedunmethylatedunknownpositionproportionpatterns1234567891263048371263048611263048711263048761263048781263048821263048871263049051263049401263049701263049791263049821263049881263050051263050211.01.52.02.53.0read count

chr12:126318381-126318383:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415223855616473104139157162166168173183207read count

chr13:19496786-19500000:+:L1HS:REF

chr13 19496786:19496967
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131949678619496807194968231949684019496846194968491949685119496923194969391949694119496946194969501949695219496957194969672468read count

chr13:31302314-31308370:+:L1HS:REF

chr13 31302314:31302519
methylatedunmethylatedunknownpositionproportionpatterns12343130231431302334313023503130236731302373313023763130238531302416313024513130246931302474313024783130248031302485313024953130251910203040read count

chr13:34480262-34486294:-:L1HS:REF

chr13 34486089:34486274
methylatedunmethylatedunknownpositionproportionpatterns1234344860893448611334486128344861303448613434486139344861573448619234486223344862323448623534486241344862583448627420406080read count

chr13:48465555-48471566:+:L1HS:REF

chr13 48465565:48465750
methylatedunmethylatedunknownpositionproportionpatterns123484655654846558148465598484656044846560748465616484656474846568248465700484657054846571148465716484657264846575020406080100read count

chr13:54572234-54573121:+:L1HS:REF

chr13 54572254:54572443
methylatedunmethylatedunknownpositionproportionpatterns1234567891054572254545722705457228754572293545722965457230554572336545723715457237554572391545724025457240454572419545724431234567read count

chr13:60888200-60888202:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567223861647310413915716216616817318320751015read count

chr13:74426326-74432354:+:L1HS:REF

chr13 74426341:74426526
methylatedunmethylatedunknownpositionproportionpatterns123457442634174426357744263747442638074426383744264237442645874426466744264767442648174426485744264877442649274426502744265261020304050read count

chr13:76612823-76618851:-:L1HS:REF

chr13 76618646:76618831
methylatedunmethylatedunknownpositionproportionpatterns12345766186467661867076618685766186877661869176618696766187147661874976618780766187897661879276618798766188147661883120406080100read count

chr13:92685561-92691592:-:L1HS:REF

chr13 92691387:92691572
methylatedunmethylatedunknownpositionproportionpatterns123456792691387926914119269142192691426926914289269143292691437926914559269149092691521926915309269153392691539926915569269157220406080100read count

chr13:97667408-97673440:-:L1HS:REF

chr13 97673235:97673420
methylatedunmethylatedunknownpositionproportionpatterns1234567891011129767323597673259976732699767327497673276976732809767328597673287976733039767333897673369976733789767338197673387976734205101520read count

chr13:105382665-105383251:-:L1HS:REF

chr13 105383056:105383234
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181910538305610538307310538308310538308810538309010538311710538315210538319210538319510538320110538323424681012read count

chr13:108510472-108516495:-:L1HS:REF

chr13 108516297:108516482
methylatedunmethylatedunknownpositionproportionpatterns123456789101085162971085163211085163311085163361085163381085163421085163471085163491085163651085164311085164401085164431085164491085164661085164821.01.52.02.53.03.54.0read count

chr14:30681601-30681603:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456223855616473104139157162166168173183207204060read count

chr14:30684809-30690837:-:L1HS:REF

chr14 30690632:30690834
methylatedunmethylatedunknownpositionproportionpatterns123306906323069065630690666306906713069067330690677306906823069070030690714306907353069076630690775306907783069078430690801306908173069083450100150read count

chr14:44705080-44711104:-:L1HS:REF

chr14 44710899:44711084
methylatedunmethylatedunknownpositionproportionpatterns1234567891044710899447109334471093844710940447109444471094944710951447109674471100244711032447110424471104544711068447110845101520read count

chr14:45477110-45483169:-:L1HS:REF

chr14 45482988:45483149
methylatedunmethylatedunknownpositionproportionpatterns123454829884548299845483003454830094548301445483032454830674548310745483110454831164548313345483149510152025read count

chr14:46727484-46727758:-:L1HS:REF

chr14 46727554:46727739
methylatedunmethylatedunknownpositionproportionpatterns123456784672755446727578467275884672759346727595467275994672760446727622467276574672768846727697467277004672770646727723467277395101520read count

chr14:48187082-48193113:+:L1HS:REF

chr14 48187103:48187288
methylatedunmethylatedunknownpositionproportionpatterns123448187103481871194818713648187142481871454818715448187185481872204818723848187243481872474818725448187264481872881020304050read count

chr14:51794601-51800632:-:L1HS:REF

chr14 51800428:51800613
methylatedunmethylatedunknownpositionproportionpatterns123456518004285180045251800462518004675180046951800473518004785180049651800562518005715180057451800580518005975180061320406080read count

chr14:52201038-52201040:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789102238556164731041391571621661681731832075101520read count

chr14:61055116-61061148:-:L1HS:REF

chr14 61060943:61061128
methylatedunmethylatedunknownpositionproportionpatterns1234566106094361060967610609776106098261060984610609886106099361060995610610116106104661061077610610866106108961061095610611126106112820406080100120read count

chr14:62535851-62541882:+:L1HS:REF

chr14 62535870:62536055
methylatedunmethylatedunknownpositionproportionpatterns1234562535870625358866253590362535909625359126253592162535952625359876253600562536010625360146253601662536021625360316253605524681012read count

chr14:63116706-63122735:-:L1HS:REF

chr14 63122530:63122715
methylatedunmethylatedunknownpositionproportionpatterns1234567863122530631225546312256463122569631225716312257563122580631225986312263363122664631226736312267663122682631226996312271510203040read count

chr14:70547290-70553322:+:L1HS:REF

chr14 70547311:70547496
methylatedunmethylatedunknownpositionproportionpatterns12345678910111270547311705473277054734470547350705473537054736270547393705474287054744670547451705474557054745770547462705474727054749651015202530read count

chr14:70731081-70731083:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212238556164731041391571621661681731832071234567read count

chr14:79314060-79314943:+:L1HS:REF

chr14 79314072:79314257
methylatedunmethylatedunknownpositionproportionpatterns12345679314072793140887931410579314111793141147931412379314154793141897931420579314207793142127931421679314218793142237931423379314257102030read count

chr15:51417216-51423246:-:L1HS:REF

chr15 51423042:51423227
methylatedunmethylatedunknownpositionproportionpatterns1234567514230425142306651423076514230815142308351423087514230925142311051423145514231765142318551423188514231945142321151423227102030405060read count

chr15:54926081-54932099:-:L1HS:REF

chr15 54931895:54932080
methylatedunmethylatedunknownpositionproportionpatterns1234567891054931895549319195493192954931934549319365493194054931945549319635493199854932029549320385493204154932047549320645493208010203040read count

chr15:55958953-55958955:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123223855616473104139157162166168173183207204060read count

chr15:81995166-82000000:+:L1HS:REF

chr15 81995187:81995372
methylatedunmethylatedunknownpositionproportionpatterns1234567891081995187819952208199522981995238819952698199530481995320819953228199532781995331819953338199533881995348819953722468read count

chr15:82882881-82888919:-:L1HS:REF

chr15 82888716:82888900
methylatedunmethylatedunknownpositionproportionpatterns1234582888716828887408288875582888757828887618288876682888784828888198288884982888858828888618288886782888884828889001020304050read count

chr15:83450804-83456834:-:L1HS:REF

chr15 83456630:83456815
methylatedunmethylatedunknownpositionproportionpatterns1234583456630834566548345666483456669834566718345667583456680834566988345673383456764834567738345677683456782834567998345681520406080100120read count

chr15:87509891-87515920:+:L1HS:REF

chr15 87509909:87510094
methylatedunmethylatedunknownpositionproportionpatterns123875099098750992587509942875099488750995187509960875099918751002687510044875100498751005387510055875100608751007087510094123456read count

chr16:9584490-9590522:-:L1HS:REF

chr16 9590317:9590502
methylatedunmethylatedunknownpositionproportionpatterns1239590317959034195903519590356959035895903629590367959038595904209590451959046095904639590469959048695905021.01.52.02.53.03.54.0read count

chr16:32587481-32588397:-:L1HS:REF

chr16 32588216:32588377
methylatedunmethylatedunknownpositionproportionpatterns12345678932588216325882263258824232588326325883383258834432588361325883771020304050read count

chr16:33952564-33958612:-:L1HS:REF

chr16 33958408:33958592
methylatedunmethylatedunknownpositionproportionpatterns13395840833958432339584423395844733958449339584533395845833958476339585113395854133958550339585533395855933958576339585921.01.52.02.53.0read count

chr16:34118474-34119193:+:L1HS:REF

chr16 34118489:34118635
methylatedunmethylatedunknownpositionproportionpatterns123456783411848934118540341186352468101214read count

chr16:35608475-35614501:-:L1HS:REF

chr16 35614302:35614471
methylatedunmethylatedunknownpositionproportionpatterns12345678356143023561432635614341356143473561435235614370356144063561444535614448356144543561447124681012read count

chr16:54042096-54048145:+:L1HS:REF

chr16 54042114:54042299
methylatedunmethylatedunknownpositionproportionpatterns123540421145404213054042147540421565404216554042196540422315404224954042254540422585404226054042265540422755404229920406080100read count

chr16:68583448-68589505:-:L1HS:REF

chr16 68589300:68589485
methylatedunmethylatedunknownpositionproportionpatterns12345685893006858932468589334685893396858934168589345685893506858936868589403685894346858944368589452685894696858948520406080read count

chr16:80727089-80730717:+:L1HS:REF

chr16 80727137:80727289
methylatedunmethylatedunknownpositionproportionpatterns1234568072713780727146807271558072718680727239807272448072725080727265807272828072728951015202530read count

chr16:83637252-83643296:+:L1HS:REF

chr16 83637252:83637470
methylatedunmethylatedunknownpositionproportionpatterns123836372528363727183637287836373048363731083637328836373378363736783637402836374208363742583637429836374318363743683637446836374701234567read count

chr17:9615985-9622015:+:L1HS:REF

chr17 9616006:9616191
methylatedunmethylatedunknownpositionproportionpatterns123456789101112961600696160229616039961604596160489616057961608896161239616139961614196161469616150961615296161579616167961619151015read count

chr17:66596579-66602595:-:L1HS:REF

chr17 66602390:66602575
methylatedunmethylatedunknownpositionproportionpatterns12345676660239066602414666024246660242966602431666024356660244066602458666024936660252466602533666025366660254266602559666025752468101214read count

chr17:66641175-66641177:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456223855616473104139157162166168173183207102030read count

chr17:69000000-69005148:-:L1HS:REF

chr17 69004943:69005142
methylatedunmethylatedunknownpositionproportionpatterns123456786900494369004950690049676900497769004982690049936900499569005011690050466900507769005086690050896900511269005128690051425101520read count

chr17:70361267-70361269:+:L1HS:NONREF

chr17:70361267-70361269:+:L1HS:NONREF 38:207
methylatedunmethylatedunknownpositionproportionpatterns123456385561647310413915716216616817318320720406080read count

chr17:70458956-70464987:+:L1HS:REF

chr17 70458977:70459161
methylatedunmethylatedunknownpositionproportionpatterns12345678704589777045899370459010704590167045901970459028704590587045909370459111704591167045912070459122704591277045913770459161204060read count

chr17:70544788-70550795:-:L1HS:REF

chr17 70550645:70550790
methylatedunmethylatedunknownpositionproportionpatterns1234567897055064570550662705506727055067770550679705506837055068870550690705507067055074170550772705507817055078470550790123456read count

chr18:535701-541755:+:L1HS:REF

chr18 535721:535905
methylatedunmethylatedunknownpositionproportionpatterns123456789101153572153573753575453576053576353577253580153583753585353585553586053586653587153588153589853590551015read count

chr18:4477329-4478177:+:L1HS:REF

chr18 4477348:4477533
methylatedunmethylatedunknownpositionproportionpatterns12345447734844773644477381447738744773904477399447743044774514477481447748344774884477492447749444774994477509447753312345read count

chr18:5684668-5687891:+:L1HS:REF

chr18 5684688:5684873
methylatedunmethylatedunknownpositionproportionpatterns123456789105684688568470456847215684727568473056847395684770568480556848215684828568483256848395684849568487351015read count

chr18:13975860-13981891:-:L1HS:REF

chr18 13981686:13981871
methylatedunmethylatedunknownpositionproportionpatterns123456789101113981686139817101398172013981725139817271398173113981736139817381398175413981789139818201398182913981832139818381398185513981871510152025read count

chr18:37819737-37825798:+:L1HS:REF

chr18 37819758:37819943
methylatedunmethylatedunknownpositionproportionpatterns123456378197583781977437819791378197973781980037819840378198753781989337819898378199023781990437819909378199193781994310203040read count

chr18:41775014-41781045:+:L1HS:REF

chr18 41775035:41775220
methylatedunmethylatedunknownpositionproportionpatterns1234567841775035417750524177506841775074417750774177508641775117417751524177517041775179417751814177518641775196417752202468read count

chr18:44021279-44024826:-:L1HS:REF

chr18 44024621:44024806
methylatedunmethylatedunknownpositionproportionpatterns123456789101112134402462144024628440246624402467144024689440247244402475544024767440248065101520read count

chr18:47660373-47666427:+:L1HS:REF

chr18 47660391:47660576
methylatedunmethylatedunknownpositionproportionpatterns1234567891011476603914766040747660424476604304766043347660442476604734766050847660526476605314766053547660537476605424766055247660576246810read count

chr18:50343959-50349987:-:L1HS:REF

chr18 50349808:50349969
methylatedunmethylatedunknownpositionproportionpatterns12345650349808503498185034982350349825503498295034985250349887503499275034993050349936503499535034996920406080100read count

chr18:51689847-51689849:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151622385561647310413915716216616817318320724681012read count

chr18:62906292-62912314:+:L1HS:REF

chr18 62906313:62906498
methylatedunmethylatedunknownpositionproportionpatterns1236290631362906329629063466290635262906355629063646290639562906430629064576290645962906464629064746290649820406080100read count

chr18:67603633-67605600:+:L1HS:REF

chr18 67603633:67603837
methylatedunmethylatedunknownpositionproportionpatterns12345678967603633676036536760366967603686676036926760370367603734676037696760378567603792676038372468101214read count

chr18:70746549-70752581:-:L1HS:REF

chr18 70752376:70752561
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131470752376707524007075241070752417707524217075242670752444707524797075251070752519707525227075252870752545707525611.01.52.02.53.03.54.0read count

chr18:72966526-72972556:-:L1HS:REF

chr18 72972351:72972536
methylatedunmethylatedunknownpositionproportionpatterns1234567897297235172972375729723857297239072972392729723967297240172972403729724197297245472972485729724977297250372972536123456read count

chr18:75846851-75852883:+:L1HS:REF

chr18 75846872:75847057
methylatedunmethylatedunknownpositionproportionpatterns123456789101112137584687275846888758469057584691175846914758469237584695475846989758470077584701275847016758470187584702375847033758470571.01.52.02.53.0read count

chr19:43864494-43867300:-:L1HS:REF

chr19 43867132:43867292
methylatedunmethylatedunknownpositionproportionpatterns123456789438671324386714943867153438671584386716043867176438672114386724143867250438672534386725943867268438672764386729251015read count

chr20:7116194-7122199:-:L1HS:REF

chr20 7121995:7122180
methylatedunmethylatedunknownpositionproportionpatterns123456789712199571220197122029712203471220367122045712206371220987122129712213871221417122147712216471221801234567read count

chr20:11632779-11638837:+:L1HS:REF

chr20 11632796:11632981
methylatedunmethylatedunknownpositionproportionpatterns12341163279611632812116328291163283511632838116328471163287811632913116329311163293611632940116329421163294711632957116329811.01.52.02.53.03.54.0read count

chr20:12801017-12807044:-:L1HS:REF

chr20 12806842:12807027
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121312806842128068661280687612806881128068831280688712806892128069101280694512806976128069851280698812806994128070111280702712345read count

chr20:23426108-23432140:+:L1HS:REF

chr20 23426128:23426289
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192023426128234261442342616123426167234261702342617923426210234262452342626323426268234262722342627423426279234262891234567read count

chr20:39977475-39977785:+:L1HS:REF

chr20 39977506:39977674
methylatedunmethylatedunknownpositionproportionpatterns1234563997750639977523399775293997753239977541399776063997762439977633399776353997764039977674204060read count

chr21:22253869-22253871:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456782238556164731041391571621661681731832071.01.52.02.53.03.54.0read count

chr22:15214621-15220667:-:L1HS:REF

chr22 15220462:15220647
methylatedunmethylatedunknownpositionproportionpatterns1234567815220462152204861522050115220503152205071522051215220530152205651522059615220605152206081522061415220631152206471.01.52.02.53.03.54.0read count

chr22:22361253-22361255:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678223855616473104139157162166168173183207102030read count

chr22:28663283-28669315:+:L1HS:REF

chr22 28663304:28663489
methylatedunmethylatedunknownpositionproportionpatterns12286633042866332028663337286633432866335528663386286634212866343928663444286634482866345028663455286634652866348950100150read count

chr22:34549683-34555708:-:L1HS:REF

chr22 34555503:34555689
methylatedunmethylatedunknownpositionproportionpatterns123453455550334555527345555423455554434555548345555553455557134555606345556243455563734555647345556503455565634555689204060read count

chr22:48985761-48991792:-:L1HS:REF

chr22 48991587:48991772
methylatedunmethylatedunknownpositionproportionpatterns123489915874899161148991621489916264899162848991632489916374899163948991655489916904899172148991730489917334899173948991756489917721.01.52.02.53.03.54.0read count

chrX:11707248-11713279:+:L1HS:REF

chrX 11707269:11707453
methylatedunmethylatedunknownpositionproportionpatterns1234567117072691170728511707302117073081170731111707320117073501170738511707391117074031170740811707412117074141170741911707429117074531234567read count

chrX:11935296-11941314:-:L1HS:REF

chrX 11941110:11941294
methylatedunmethylatedunknownpositionproportionpatterns1234567891194111011941134119411441194114911941151119411551194116011941178119412131194124311941252119412551194126111941278119412941.01.52.02.53.0read count

chrX:23238516-23244575:+:L1HS:REF

chrX 23238516:23238722
methylatedunmethylatedunknownpositionproportionpatterns123456723238516232385372323855323238570232385762323857923238588232386192323867023238672232386772323868123238683232386882323869823238722123456read count

chrX:26314417-26320446:-:L1HS:REF

chrX 26320243:26320428
methylatedunmethylatedunknownpositionproportionpatterns123456726320243263202672632027726320282263202842632029326320311263203462632037726320386263203892632039526320412263204285101520read count

chrX:50019456-50025505:-:L1HS:REF

chrX 50025300:50025485
methylatedunmethylatedunknownpositionproportionpatterns1235002530050025324500253345002533950025341500253455002535050025352500253685002540350025434500254435002544650025452500254695002548520406080100read count

chrX:54118685-54124744:-:L1HS:REF

chrX 54124564:54124725
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819202122541245645412457454124579541245815412458554124590541246085412464354124674541246835412468654124692541247095412472551015read count

chrX:56695884-56701916:+:L1HS:REF

chrX 56695905:56696090
methylatedunmethylatedunknownpositionproportionpatterns123456756695905566959215669593856695944566959475669595656695987566960225669604056696045566960495669605656696066566960902468read count

chrX:64013267-64019286:-:L1HS:REF

chrX 64019081:64019266
methylatedunmethylatedunknownpositionproportionpatterns1234564019081640191056401911564019120640191226401912664019131640191496401918464019215640192246401922764019233640192506401926612345read count

chrX:66180696-66186728:-:L1HS:REF

chrX 66186531:66186708
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223661865316618655766186562661865646618657366186591661866266618665766186666661866696618667566186692661867081.01.21.41.61.82.0read count

chrX:73106142-73112170:+:L1HS:REF

chrX 73106163:73106348
methylatedunmethylatedunknownpositionproportionpatterns123731061637310619673106202731062057310621473106245731062807310629873106303731063077310630973106314731063247310634812345read count

chrX:73380991-73387013:+:L1HS:REF

chrX 73381003:73381188
methylatedunmethylatedunknownpositionproportionpatterns1234567733810037338101973381036733810427338104573381085733811207338113873381143733811477338114973381154733811885101520read count

chrX:76322775-76328806:-:L1HS:REF

chrX 76328614:76328799
methylatedunmethylatedunknownpositionproportionpatterns12345677632861476328638763286487632865376328655763286597632866476328682763287177632874876328757763287607632876676328783763287992468read count

chrX:80905077-80905430:-:L1HS:REF

chrX 80905251:80905396
methylatedunmethylatedunknownpositionproportionpatterns123456789101112809052518090526680905277809052958090533080905361809053708090537380905396510152025read count

chrX:81841153-81847184:+:L1HS:REF

chrX 81841174:81841358
methylatedunmethylatedunknownpositionproportionpatterns12345678184117481841207818412138184121681841225818412558184129081841308818413178184131981841324818413348184135851015read count

chrX:83059584-83065637:-:L1HS:REF

chrX 83065432:83065617
methylatedunmethylatedunknownpositionproportionpatterns1238306543283065456830654668306547183065473830654778306548283065500830655358306556683065575830655788306558483065601830656171.01.52.02.53.0read count

chrX:83542396-83548420:+:L1HS:REF

chrX 83542415:83542600
methylatedunmethylatedunknownpositionproportionpatterns12345678835424158354243183542448835424548354245783542466835424978354253283542550835425558354255983542561835425668354257683542584835426005101520read count

chrX:83838051-83839860:-:L1HS:REF

chrX 83839657:83839842
methylatedunmethylatedunknownpositionproportionpatterns12345678983839657838396648383968183839691838396988383970283839709838397258383976083839800838398038383984251015read count

chrX:85733685-85734499:+:L1HS:REF

chrX 85733764:85733807
methylatedunmethylatedunknownpositionproportionpatterns1238573376485733775857338071020304050read count

chrX:87821407-87827419:+:L1HS:REF

chrX 87821428:87821613
methylatedunmethylatedunknownpositionproportionpatterns123456878214288782144487821461878214678782147087821479878215108782154587821563878215688782157287821574878215798782158987821613123456read count

chrX:92254241-92256469:-:L1HS:REF

chrX 92256271:92256449
methylatedunmethylatedunknownpositionproportionpatterns1234567922562719225630392256305922563099225636792256410922564339225644920406080100read count

chrX:96057824-96063842:-:L1HS:REF

chrX 96063638:96063823
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192021222324252627282930313233343536960636389606366296063672960636799606368396063688960637069606374196063781960637849606379096063807960638231.01.52.02.53.03.54.0read count

chrX:106469285-106475319:+:L1HS:REF

chrX 106469305:106469490
methylatedunmethylatedunknownpositionproportionpatterns1234106469305106469321106469338106469344106469347106469356106469387106469422106469440106469445106469449106469451106469456106469466106469490204060read count

chrX:112314520-112314522:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819202238556164731041391571621661681731832071.01.52.02.53.03.54.0read count

chrX:119435468-119441493:-:L1HS:REF

chrX 119441291:119441475
methylatedunmethylatedunknownpositionproportionpatterns1211944129111944131511944132511944133011944133211944133611944134111944135911944139411944142411944143311944143611944144211944145911944147520406080100read count

chrX:127362223-127368248:+:L1HS:REF

chrX 127362243:127362428
methylatedunmethylatedunknownpositionproportionpatterns1212736224312736225912736227612736228212736228512736232512736236012736237812736238712736238912736239412736240412736242812345read count

chrX:130517377-130523407:+:L1HS:REF

chrX 130517396:130517581
methylatedunmethylatedunknownpositionproportionpatterns1234130517396130517412130517429130517435130517438130517447130517478130517513130517531130517540130517542130517547130517557130517581204060read count

chrX:141421202-141427246:-:L1HS:REF

chrX 141427042:141427226
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151414270421414270661414270761414270811414270831414270871414270921414271101414271451414271751414271841414271871414271931414272101414272261.01.52.02.53.0read count

chrX:142477849-142483853:+:L1HS:REF

chrX 142477865:142478050
methylatedunmethylatedunknownpositionproportionpatterns12345671424778651424778811424778981424779041424779071424779161424779821424780001424780051424780091424780111424780161424780261424780501234567read count

chrX:147653734-147659767:+:L1HS:REF

chrX 147653734:147653940
methylatedunmethylatedunknownpositionproportionpatterns1234561476537341476537551476537711476537881476537941476537971476538061476538371476538721476538901476538951476538991476539061476539161476539401234567read count

chrX:149178166-149184185:-:L1HS:REF

chrX 149183992:149184177
methylatedunmethylatedunknownpositionproportionpatterns123451491839921491840261491840311491840331491840371491840421491840601491840951491841261491841381491841441491841611491841775101520read count

chrX:151330320-151336351:+:L1HS:REF

chrX 151330341:151330525
methylatedunmethylatedunknownpositionproportionpatterns123456151330341151330357151330374151330383151330392151330423151330458151330474151330481151330485151330487151330491151330501151330525246810read count

chrX:155516016-155522048:-:L1HS:REF

chrX 155521843:155522028
methylatedunmethylatedunknownpositionproportionpatterns123415552184315552186715552187715552188215552188415552188815552189315552191115552194615552197715552198615552198915552199515552201215552202820406080100120read count

Visualisation settings

Methylation patterns

Histogram

Colour

Amplicon order

Drag the amplicon names up or down to reorder their display.

  • ↕ chr1:34566055-34572105:-:L1HS:REF
  • ↕ chr1:67078891-67084915:-:L1HS:REF
  • ↕ chr1:68736693-68740136:-:L1HS:REF
  • ↕ chr1:77000000-77005515:-:L1HS:REF
  • ↕ chr1:80939203-80945257:-:L1HS:REF
  • ↕ chr1:84052389-84058406:-:L1HS:REF
  • ↕ chr1:85748519-85754548:+:L1HS:REF
  • ↕ chr1:85927067-85933100:+:L1HS:REF
  • ↕ chr1:86679080-86685111:-:L1HS:REF
  • ↕ chr1:95336285-95336287:-:L1HS:NONREF
  • ↕ chr1:104770247-104776278:-:L1HS:REF
  • ↕ chr1:104843833-104849864:-:L1HS:REF
  • ↕ chr1:113497220-113500000:+:L1HS:REF
  • ↕ chr1:118852351-118858380:+:L1HS:REF
  • ↕ chr1:121532230-121538261:-:L1HS:REF
  • ↕ chr1:146717192-146723218:-:L1HS:REF
  • ↕ chr1:166243053-166249084:-:L1HS:REF
  • ↕ chr1:174590323-174596379:-:L1HS:REF
  • ↕ chr1:179606225-179606227:-:L1HS:NONREF
  • ↕ chr1:180866811-180872843:-:L1HS:REF
  • ↕ chr1:187343764-187349794:-:L1HS:REF
  • ↕ chr1:187597671-187603699:+:L1HS:REF
  • ↕ chr1:193717837-193723892:-:L1HS:REF
  • ↕ chr1:196219370-196225402:-:L1HS:REF
  • ↕ chr1:197707714-197713746:+:L1HS:REF
  • ↕ chr1:197802331-197803141:+:L1HS:REF
  • ↕ chr1:209913771-209919823:-:L1HS:REF
  • ↕ chr1:216485645-216487614:+:L1HS:REF
  • ↕ chr1:220245155-220246008:+:L1HS:REF
  • ↕ chr1:237019467-237025494:-:L1HS:REF
  • ↕ chr1:237075264-237081293:+:L1HS:REF
  • ↕ chr1:239623498-239629523:-:L1HS:REF
  • ↕ chr2:11000000-11002136:-:L1HS:REF
  • ↕ chr2:16593725-16599758:-:L1HS:REF
  • ↕ chr2:22968126-22968128:-:L1HS:NONREF
  • ↕ chr2:36112506-36118537:-:L1HS:REF
  • ↕ chr2:36343098-36343100:-:L1HS:NONREF
  • ↕ chr2:71411474-71417501:-:L1HS:REF
  • ↕ chr2:81870918-81870920:+:L1HS:NONREF
  • ↕ chr2:86655238-86661268:-:L1HS:REF
  • ↕ chr2:102566355-102572385:-:L1HS:REF
  • ↕ chr2:112503812-112509845:-:L1HS:REF
  • ↕ chr2:126178048-126184064:-:L1HS:REF
  • ↕ chr2:129415687-129417400:-:L1HS:REF
  • ↕ chr2:129685897-129687022:-:L1HS:REF
  • ↕ chr2:143253223-143253225:+:L1HS:NONREF
  • ↕ chr2:143860956-143866987:+:L1HS:REF
  • ↕ chr2:148188745-148194773:+:L1HS:REF
  • ↕ chr2:153007766-153013796:-:L1HS:REF
  • ↕ chr2:155671339-155671341:+:L1HS:NONREF
  • ↕ chr2:157566353-157572377:+:L1HS:REF
  • ↕ chr2:160114516-160120680:+:L1HS:REF
  • ↕ chr2:166988454-166994509:+:L1HS:REF
  • ↕ chr2:169248623-169254656:+:L1HS:REF
  • ↕ chr2:172315270-172321297:+:L1HS:REF
  • ↕ chr2:175481951-175487994:-:L1HS:REF
  • ↕ chr2:177973073-177979090:+:L1HS:REF
  • ↕ chr2:180833661-180839689:-:L1HS:REF
  • ↕ chr2:190613973-190613975:-:L1HS:NONREF
  • ↕ chr2:193170704-193171720:+:L1HS:REF
  • ↕ chr2:193212420-193218448:-:L1HS:REF
  • ↕ chr2:196905587-196911636:+:L1HS:REF
  • ↕ chr2:213567231-213573262:-:L1HS:REF
  • ↕ chr2:220413500-220413502:-:L1HS:NONREF
  • ↕ chr2:229476842-229476844:+:L1HS:NONREF
  • ↕ chr2:230337069-230342513:-:L1HS:REF
  • ↕ chr2:232149196-232155229:-:L1HS:REF
  • ↕ chr3:3963076-3969110:+:L1HS:REF
  • ↕ chr3:4916534-4922591:+:L1HS:REF
  • ↕ chr3:11488672-11492490:-:L1HS:REF
  • ↕ chr3:17858274-17861391:-:L1HS:REF
  • ↕ chr3:18516080-18520244:+:L1HS:REF
  • ↕ chr3:26036528-26042769:-:L1HS:REF
  • ↕ chr3:26398017-26404045:-:L1HS:REF
  • ↕ chr3:29108111-29112113:-:L1HS:REF
  • ↕ chr3:35454617-35458296:+:L1HS:REF
  • ↕ chr3:46783105-46789138:-:L1HS:REF
  • ↕ chr3:54394322-54400323:-:L1HS:REF
  • ↕ chr3:55754551-55754553:+:L1HS:NONREF
  • ↕ chr3:77763677-77769678:-:L1HS:REF
  • ↕ chr3:80541011-80541013:-:L1HS:NONREF
  • ↕ chr3:82337499-82339442:+:L1HS:REF
  • ↕ chr3:89460825-89466856:-:L1HS:REF
  • ↕ chr3:90169567-90175598:-:L1HS:REF
  • ↕ chr3:103556537-103562569:-:L1HS:REF
  • ↕ chr3:108749400-108755425:+:L1HS:REF
  • ↕ chr3:109199872-109205903:+:L1HS:REF
  • ↕ chr3:110888814-110890548:+:L1HS:REF
  • ↕ chr3:116359999-116366026:+:L1HS:REF
  • ↕ chr3:120573021-120579186:+:L1HS:REF
  • ↕ chr3:123871878-123871880:+:L1HS:NONREF
  • ↕ chr3:132946006-132952034:-:L1HS:REF
  • ↕ chr3:135002247-135005976:-:L1HS:REF
  • ↕ chr3:136479056-136485103:-:L1HS:REF
  • ↕ chr3:136963693-136969736:-:L1HS:REF
  • ↕ chr3:139325613-139325615:+:L1HS:NONREF
  • ↕ chr3:139590956-139596035:+:L1HS:REF
  • ↕ chr3:158019676-158025704:+:L1HS:REF
  • ↕ chr3:159095379-159101394:-:L1HS:REF
  • ↕ chr3:163236941-163242962:+:L1HS:REF
  • ↕ chr3:164291525-164296426:+:L1HS:REF
  • ↕ chr3:169552175-169552177:+:L1HS:NONREF
  • ↕ chr3:190964647-190965526:-:L1HS:REF
  • ↕ chr4:14755114-14761144:+:L1HS:REF
  • ↕ chr4:15841546-15847572:+:L1HS:REF
  • ↕ chr4:16942776-16944630:+:L1HS:REF
  • ↕ chr4:21159390-21165421:+:L1HS:REF
  • ↕ chr4:23614771-23620793:+:L1HS:REF
  • ↕ chr4:48051954-48057974:-:L1HS:REF
  • ↕ chr4:52538471-52544498:+:L1HS:REF
  • ↕ chr4:52816456-52822486:+:L1HS:REF
  • ↕ chr4:57562316-57568347:-:L1HS:REF
  • ↕ chr4:61939927-61945962:-:L1HS:REF
  • ↕ chr4:62726948-62732969:-:L1HS:REF
  • ↕ chr4:69664009-69667565:+:L1HS:REF
  • ↕ chr4:70015396-70019676:-:L1HS:REF
  • ↕ chr4:74717539-74723587:-:L1HS:REF
  • ↕ chr4:78105735-78111765:+:L1HS:REF
  • ↕ chr4:79704552-79710581:+:L1HS:REF
  • ↕ chr4:79937715-79943746:+:L1HS:REF
  • ↕ chr4:87347103-87353146:-:L1HS:REF
  • ↕ chr4:91437491-91443691:+:L1HS:REF
  • ↕ chr4:91978211-91984413:+:L1HS:REF
  • ↕ chr4:93608283-93614338:-:L1HS:REF
  • ↕ chr4:98592435-98598463:-:L1HS:REF
  • ↕ chr4:106571057-106577070:-:L1HS:REF
  • ↕ chr4:110690112-110693684:-:L1HS:REF
  • ↕ chr4:111894801-111900831:+:L1HS:REF
  • ↕ chr4:119948726-119954758:-:L1HS:REF
  • ↕ chr4:135178140-135183747:-:L1HS:REF
  • ↕ chr4:136293494-136299546:-:L1HS:REF
  • ↕ chr4:137496278-137500000:+:L1HS:REF
  • ↕ chr4:144809658-144810951:+:L1HS:REF
  • ↕ chr4:166449405-166449678:-:L1HS:REF
  • ↕ chr4:166569976-166576007:+:L1HS:REF
  • ↕ chr4:166850455-166851634:+:L1HS:REF
  • ↕ chr4:169515501-169521532:-:L1HS:REF
  • ↕ chr5:4500001-4502372:-:L1HS:REF
  • ↕ chr5:15906515-15912550:-:L1HS:REF
  • ↕ chr5:34147845-34154031:+:L1HS:REF
  • ↕ chr5:52086499-52088220:-:L1HS:REF
  • ↕ chr5:66750283-66754219:+:L1HS:REF
  • ↕ chr5:79778884-79784938:-:L1HS:REF
  • ↕ chr5:81616090-81622140:+:L1HS:REF
  • ↕ chr5:86510690-86516743:+:L1HS:REF
  • ↕ chr5:90154963-90154965:+:L1HS:NONREF
  • ↕ chr5:102131356-102137385:+:L1HS:REF
  • ↕ chr5:102189483-102194435:+:L1HS:REF
  • ↕ chr5:104518587-104524616:+:L1HS:REF
  • ↕ chr5:105513236-105519274:-:L1HS:REF
  • ↕ chr5:109259387-109265418:+:L1HS:REF
  • ↕ chr5:110144555-110144557:-:L1HS:NONREF
  • ↕ chr5:111302238-111308262:+:L1HS:REF
  • ↕ chr5:116113364-116113366:-:L1HS:NONREF
  • ↕ chr5:119684785-119690814:-:L1HS:REF
  • ↕ chr5:133583288-133589299:+:L1HS:REF
  • ↕ chr5:146609485-146615534:+:L1HS:REF
  • ↕ chr5:152886441-152892473:-:L1HS:REF
  • ↕ chr5:153070982-153077008:-:L1HS:REF
  • ↕ chr5:156061919-156067966:-:L1HS:REF
  • ↕ chr5:160709608-160715639:-:L1HS:REF
  • ↕ chr5:162530742-162531677:-:L1HS:REF
  • ↕ chr5:166141191-166145692:-:L1HS:REF
  • ↕ chr5:166966760-166972815:-:L1HS:REF
  • ↕ chr5:173402796-173408828:-:L1HS:REF
  • ↕ chr6:2417774-2423803:-:L1HS:REF
  • ↕ chr6:69495362-69500000:+:L1HS:REF
  • ↕ chr6:70010347-70016552:+:L1HS:REF
  • ↕ chr6:72988654-72994686:-:L1HS:REF
  • ↕ chr6:76875759-76877075:-:L1HS:REF
  • ↕ chr6:83333952-83339981:+:L1HS:REF
  • ↕ chr6:86000000-86005073:-:L1HS:REF
  • ↕ chr6:93865738-93871783:-:L1HS:REF
  • ↕ chr6:94197995-94204060:-:L1HS:REF
  • ↕ chr6:98703059-98708329:+:L1HS:REF
  • ↕ chr6:112703745-112709778:+:L1HS:REF
  • ↕ chr6:117102131-117108163:+:L1HS:REF
  • ↕ chr6:121162716-121168725:+:L1HS:REF
  • ↕ chr6:128998385-129000000:+:L1HS:REF
  • ↕ chr6:142128962-142128964:-:L1HS:NONREF
  • ↕ chr6:156034135-156040165:+:L1HS:REF
  • ↕ chr6:156324980-156331010:-:L1HS:REF
  • ↕ chr7:7465092-7471120:+:L1HS:REF
  • ↕ chr7:8351723-8353975:+:L1HS:REF
  • ↕ chr7:8847084-8847086:+:L1HS:NONREF
  • ↕ chr7:12497211-12500000:+:L1HS:REF
  • ↕ chr7:25041860-25047891:-:L1HS:REF
  • ↕ chr7:30439242-30445274:+:L1HS:REF
  • ↕ chr7:49680245-49686300:-:L1HS:REF
  • ↕ chr7:57539590-57540834:+:L1HS:REF
  • ↕ chr7:63148831-63154859:-:L1HS:REF
  • ↕ chr7:66286853-66292884:-:L1HS:REF
  • ↕ chr7:70197328-70203357:+:L1HS:REF
  • ↕ chr7:91173443-91179517:+:L1HS:REF
  • ↕ chr7:93787624-93793679:-:L1HS:REF
  • ↕ chr7:97613656-97619688:+:L1HS:REF
  • ↕ chr7:108188818-108188820:+:L1HS:NONREF
  • ↕ chr7:110707004-110713024:-:L1HS:REF
  • ↕ chr7:111243515-111249546:-:L1HS:REF
  • ↕ chr7:111963193-111969223:+:L1HS:REF
  • ↕ chr7:113776122-113782152:-:L1HS:REF
  • ↕ chr7:125179570-125181978:-:L1HS:REF
  • ↕ chr7:141062014-141068042:-:L1HS:REF
  • ↕ chr7:141920659-141926712:-:L1HS:REF
  • ↕ chr7:147842591-147848623:-:L1HS:REF
  • ↕ chr7:150597094-150602628:+:L1HS:REF
  • ↕ chr8:8470859-8476906:+:L1HS:REF
  • ↕ chr8:27113618-27119645:+:L1HS:REF
  • ↕ chr8:56249347-56249349:+:L1HS:NONREF
  • ↕ chr8:72875538-72881588:-:L1HS:REF
  • ↕ chr8:75621331-75627355:-:L1HS:REF
  • ↕ chr8:88685705-88691760:+:L1HS:REF
  • ↕ chr8:91522091-91528121:-:L1HS:REF
  • ↕ chr8:104739851-104745873:-:L1HS:REF
  • ↕ chr8:121329878-121334807:-:L1HS:REF
  • ↕ chr8:127311575-127315431:+:L1HS:REF
  • ↕ chr8:134070756-134076773:-:L1HS:REF
  • ↕ chr8:135875862-135881890:+:L1HS:REF
  • ↕ chr8:136438074-136444105:-:L1HS:REF
  • ↕ chr9:5491417-5491419:+:L1HS:NONREF
  • ↕ chr9:18584294-18584296:+:L1HS:NONREF
  • ↕ chr9:20655632-20658802:-:L1HS:REF
  • ↕ chr9:63913382-63916426:+:L1HS:REF
  • ↕ chr9:83049539-83055571:-:L1HS:REF
  • ↕ chr9:87276756-87276758:-:L1HS:NONREF
  • ↕ chr9:90149604-90155634:+:L1HS:REF
  • ↕ chr9:94113535-94119565:-:L1HS:REF
  • ↕ chr9:95697585-95703604:+:L1HS:REF
  • ↕ chr9:99498741-99500000:+:L1HS:REF
  • ↕ chr9:103237485-103241471:+:L1HS:REF
  • ↕ chr9:110417102-110423126:+:L1HS:REF
  • ↕ chr9:110791097-110797129:+:L1HS:REF
  • ↕ chr9:112798107-112804159:-:L1HS:REF
  • ↕ chr10:5245354-5251383:+:L1HS:REF
  • ↕ chr10:19088601-19094618:-:L1HS:REF
  • ↕ chr10:25418756-25418758:-:L1HS:NONREF
  • ↕ chr10:33510845-33516876:-:L1HS:REF
  • ↕ chr10:37995443-38000000:+:L1HS:REF
  • ↕ chr10:38190899-38190901:+:L1HS:NONREF
  • ↕ chr10:81441665-81441975:-:L1HS:REF
  • ↕ chr10:85355506-85361538:+:L1HS:REF
  • ↕ chr10:98782941-98788971:-:L1HS:REF
  • ↕ chr10:105377346-105383377:-:L1HS:REF
  • ↕ chr10:105775520-105781551:-:L1HS:REF
  • ↕ chr10:108310130-108316139:-:L1HS:REF
  • ↕ chr10:112237295-112237297:-:L1HS:NONREF
  • ↕ chr10:128826794-128826796:+:L1HS:NONREF
  • ↕ chr11:5914493-5918448:+:L1HS:REF
  • ↕ chr11:24327951-24334001:+:L1HS:REF
  • ↕ chr11:25500009-25502139:-:L1HS:REF
  • ↕ chr11:31315654-31321680:-:L1HS:REF
  • ↕ chr11:36551606-36557636:-:L1HS:REF
  • ↕ chr11:48847694-48853724:-:L1HS:REF
  • ↕ chr11:54849946-54851079:+:L1HS:REF
  • ↕ chr11:56103285-56103287:+:L1HS:NONREF
  • ↕ chr11:58000000-58000187:-:L1HS:REF
  • ↕ chr11:78677772-78683802:-:L1HS:REF
  • ↕ chr11:85324758-85330821:+:L1HS:REF
  • ↕ chr11:87340031-87346061:-:L1HS:REF
  • ↕ chr11:87855849-87855851:-:L1HS:NONREF
  • ↕ chr11:90400067-90406098:-:L1HS:REF
  • ↕ chr11:90966271-90972302:-:L1HS:REF
  • ↕ chr11:93420986-93427031:+:L1HS:REF
  • ↕ chr11:95436216-95442246:+:L1HS:REF
  • ↕ chr11:108685166-108685556:-:L1HS:REF
  • ↕ chr11:109177494-109183526:-:L1HS:REF
  • ↕ chr11:125536609-125542640:+:L1HS:REF
  • ↕ chr12:3500000-3505228:-:L1HS:REF
  • ↕ chr12:28073478-28073480:-:L1HS:NONREF
  • ↕ chr12:33864388-33864390:-:L1HS:NONREF
  • ↕ chr12:38799646-38805673:+:L1HS:REF
  • ↕ chr12:44108220-44114234:-:L1HS:REF
  • ↕ chr12:51562631-51568657:-:L1HS:REF
  • ↕ chr12:54788573-54794627:+:L1HS:REF
  • ↕ chr12:55096256-55102283:-:L1HS:REF
  • ↕ chr12:69773410-69779441:-:L1HS:REF
  • ↕ chr12:73283667-73289668:-:L1HS:REF
  • ↕ chr12:74874868-74880901:+:L1HS:REF
  • ↕ chr12:101146043-101152064:+:L1HS:REF
  • ↕ chr12:108996947-109000000:+:L1HS:REF
  • ↕ chr12:126299023-126305038:-:L1HS:REF
  • ↕ chr12:126318381-126318383:-:L1HS:NONREF
  • ↕ chr13:19496786-19500000:+:L1HS:REF
  • ↕ chr13:31302314-31308370:+:L1HS:REF
  • ↕ chr13:34480262-34486294:-:L1HS:REF
  • ↕ chr13:48465555-48471566:+:L1HS:REF
  • ↕ chr13:54572234-54573121:+:L1HS:REF
  • ↕ chr13:60888200-60888202:-:L1HS:NONREF
  • ↕ chr13:74426326-74432354:+:L1HS:REF
  • ↕ chr13:76612823-76618851:-:L1HS:REF
  • ↕ chr13:92685561-92691592:-:L1HS:REF
  • ↕ chr13:97667408-97673440:-:L1HS:REF
  • ↕ chr13:105382665-105383251:-:L1HS:REF
  • ↕ chr13:108510472-108516495:-:L1HS:REF
  • ↕ chr14:30681601-30681603:-:L1HS:NONREF
  • ↕ chr14:30684809-30690837:-:L1HS:REF
  • ↕ chr14:44705080-44711104:-:L1HS:REF
  • ↕ chr14:45477110-45483169:-:L1HS:REF
  • ↕ chr14:46727484-46727758:-:L1HS:REF
  • ↕ chr14:48187082-48193113:+:L1HS:REF
  • ↕ chr14:51794601-51800632:-:L1HS:REF
  • ↕ chr14:52201038-52201040:-:L1HS:NONREF
  • ↕ chr14:61055116-61061148:-:L1HS:REF
  • ↕ chr14:62535851-62541882:+:L1HS:REF
  • ↕ chr14:63116706-63122735:-:L1HS:REF
  • ↕ chr14:70547290-70553322:+:L1HS:REF
  • ↕ chr14:70731081-70731083:+:L1HS:NONREF
  • ↕ chr14:79314060-79314943:+:L1HS:REF
  • ↕ chr15:51417216-51423246:-:L1HS:REF
  • ↕ chr15:54926081-54932099:-:L1HS:REF
  • ↕ chr15:55958953-55958955:+:L1HS:NONREF
  • ↕ chr15:81995166-82000000:+:L1HS:REF
  • ↕ chr15:82882881-82888919:-:L1HS:REF
  • ↕ chr15:83450804-83456834:-:L1HS:REF
  • ↕ chr15:87509891-87515920:+:L1HS:REF
  • ↕ chr16:9584490-9590522:-:L1HS:REF
  • ↕ chr16:32587481-32588397:-:L1HS:REF
  • ↕ chr16:33952564-33958612:-:L1HS:REF
  • ↕ chr16:34118474-34119193:+:L1HS:REF
  • ↕ chr16:35608475-35614501:-:L1HS:REF
  • ↕ chr16:54042096-54048145:+:L1HS:REF
  • ↕ chr16:68583448-68589505:-:L1HS:REF
  • ↕ chr16:80727089-80730717:+:L1HS:REF
  • ↕ chr16:83637252-83643296:+:L1HS:REF
  • ↕ chr17:9615985-9622015:+:L1HS:REF
  • ↕ chr17:66596579-66602595:-:L1HS:REF
  • ↕ chr17:66641175-66641177:+:L1HS:NONREF
  • ↕ chr17:69000000-69005148:-:L1HS:REF
  • ↕ chr17:70361267-70361269:+:L1HS:NONREF
  • ↕ chr17:70458956-70464987:+:L1HS:REF
  • ↕ chr17:70544788-70550795:-:L1HS:REF
  • ↕ chr18:535701-541755:+:L1HS:REF
  • ↕ chr18:4477329-4478177:+:L1HS:REF
  • ↕ chr18:5684668-5687891:+:L1HS:REF
  • ↕ chr18:13975860-13981891:-:L1HS:REF
  • ↕ chr18:37819737-37825798:+:L1HS:REF
  • ↕ chr18:41775014-41781045:+:L1HS:REF
  • ↕ chr18:44021279-44024826:-:L1HS:REF
  • ↕ chr18:47660373-47666427:+:L1HS:REF
  • ↕ chr18:50343959-50349987:-:L1HS:REF
  • ↕ chr18:51689847-51689849:-:L1HS:NONREF
  • ↕ chr18:62906292-62912314:+:L1HS:REF
  • ↕ chr18:67603633-67605600:+:L1HS:REF
  • ↕ chr18:70746549-70752581:-:L1HS:REF
  • ↕ chr18:72966526-72972556:-:L1HS:REF
  • ↕ chr18:75846851-75852883:+:L1HS:REF
  • ↕ chr19:43864494-43867300:-:L1HS:REF
  • ↕ chr20:7116194-7122199:-:L1HS:REF
  • ↕ chr20:11632779-11638837:+:L1HS:REF
  • ↕ chr20:12801017-12807044:-:L1HS:REF
  • ↕ chr20:23426108-23432140:+:L1HS:REF
  • ↕ chr20:39977475-39977785:+:L1HS:REF
  • ↕ chr21:22253869-22253871:-:L1HS:NONREF
  • ↕ chr22:15214621-15220667:-:L1HS:REF
  • ↕ chr22:22361253-22361255:+:L1HS:NONREF
  • ↕ chr22:28663283-28669315:+:L1HS:REF
  • ↕ chr22:34549683-34555708:-:L1HS:REF
  • ↕ chr22:48985761-48991792:-:L1HS:REF
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  • ↕ chrX:11935296-11941314:-:L1HS:REF
  • ↕ chrX:23238516-23244575:+:L1HS:REF
  • ↕ chrX:26314417-26320446:-:L1HS:REF
  • ↕ chrX:50019456-50025505:-:L1HS:REF
  • ↕ chrX:54118685-54124744:-:L1HS:REF
  • ↕ chrX:56695884-56701916:+:L1HS:REF
  • ↕ chrX:64013267-64019286:-:L1HS:REF
  • ↕ chrX:66180696-66186728:-:L1HS:REF
  • ↕ chrX:73106142-73112170:+:L1HS:REF
  • ↕ chrX:73380991-73387013:+:L1HS:REF
  • ↕ chrX:76322775-76328806:-:L1HS:REF
  • ↕ chrX:80905077-80905430:-:L1HS:REF
  • ↕ chrX:81841153-81847184:+:L1HS:REF
  • ↕ chrX:83059584-83065637:-:L1HS:REF
  • ↕ chrX:83542396-83548420:+:L1HS:REF
  • ↕ chrX:83838051-83839860:-:L1HS:REF
  • ↕ chrX:85733685-85734499:+:L1HS:REF
  • ↕ chrX:87821407-87827419:+:L1HS:REF
  • ↕ chrX:92254241-92256469:-:L1HS:REF
  • ↕ chrX:96057824-96063842:-:L1HS:REF
  • ↕ chrX:106469285-106475319:+:L1HS:REF
  • ↕ chrX:112314520-112314522:-:L1HS:NONREF
  • ↕ chrX:119435468-119441493:-:L1HS:REF
  • ↕ chrX:127362223-127368248:+:L1HS:REF
  • ↕ chrX:130517377-130523407:+:L1HS:REF
  • ↕ chrX:141421202-141427246:-:L1HS:REF
  • ↕ chrX:142477849-142483853:+:L1HS:REF
  • ↕ chrX:147653734-147659767:+:L1HS:REF
  • ↕ chrX:149178166-149184185:-:L1HS:REF
  • ↕ chrX:151330320-151336351:+:L1HS:REF
  • ↕ chrX:155516016-155522048:-:L1HS:REF