Methylation of L1HS elements found in K562 (both full-length and 3'-truncated)

chr1:34566055-34572105:-:L1HS:REF

chr1 34571900:34572085
methylatedunmethylatedunknownpositionproportionpatterns1234345719003457192434571934345719413457194534571950345719683457200334572034345720433457204634572052345720693457208510203040read count

chr1:67078891-67084915:-:L1HS:REF

chr1 67084713:67084897
methylatedunmethylatedunknownpositionproportionpatterns1234567891011126708471367084737670847476708475267084754670847586708476367084781670848166708484667084855670848586708486467084881670848972468read count

chr1:68736693-68740136:-:L1HS:REF

chr1 68739931:68740116
methylatedunmethylatedunknownpositionproportionpatterns12368739931687399556873996568739970687399726873998168740034687400656874007468740077687401006874011620406080100read count

chr1:77000000-77005515:-:L1HS:REF

chr1 77005311:77005480
methylatedunmethylatedunknownpositionproportionpatterns123457700531177005335770053457700535077005352770053567700536177005414770054457700545477005457770054637700548010203040read count

chr1:84052389-84058406:-:L1HS:REF

chr1 84058203:84058387
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223242526272829303132338405820384058227840582378405824284058244840582488405825384058271840583068405833684058345840583488405835484058371840583871.01.21.41.61.82.0read count

chr1:85748519-85754548:+:L1HS:REF

chr1 85748540:85748725
methylatedunmethylatedunknownpositionproportionpatterns1238574854085748556857485738574858285748591857486228574865785748675857486848574868685748691857487018574872520406080100read count

chr1:85927067-85933100:+:L1HS:REF

chr1 85927084:85927273
methylatedunmethylatedunknownpositionproportionpatterns123485927084859270888592710485927121859271278592713085927139859271708592720585927223859272288592723285927234859272398592727351015read count

chr1:86679080-86685111:-:L1HS:REF

chr1 86684907:86685092
methylatedunmethylatedunknownpositionproportionpatterns1238668490786684931866849418668494686684948866849528668495786684975866850108668504186685050866850538668505986685076866850921234567read count

chr1:104770247-104776278:-:L1HS:REF

chr1 104776073:104776276
methylatedunmethylatedunknownpositionproportionpatterns1234104776073104776097104776107104776112104776114104776123104776125104776176104776207104776216104776219104776225104776242104776258104776276510152025read count

chr1:104843833-104849864:-:L1HS:REF

chr1 104849660:104849845
methylatedunmethylatedunknownpositionproportionpatterns12345104849660104849684104849694104849699104849701104849705104849710104849712104849728104849763104849794104849806104849812104849829104849845204060read count

chr1:113497220-113500000:+:L1HS:REF

chr1 113497236:113497405
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223242526272829303132333435363711349723611349725311349725911349726211349727111349730211349733711349735511349736011349736411349736611349737111349738111349740512345read count

chr1:118852351-118858380:+:L1HS:REF

chr1 118852371:118852556
methylatedunmethylatedunknownpositionproportionpatterns12311885237111885238711885240411885241011885241311885242211885245311885248811885250611885251111885251511885251711885252211885253211885255620406080100120read count

chr1:121532230-121538261:-:L1HS:REF

chr1 121538056:121538241
methylatedunmethylatedunknownpositionproportionpatterns123121538056121538080121538090121538097121538101121538106121538124121538159121538190121538199121538202121538208121538225121538241102030405060read count

chr1:146717192-146723218:-:L1HS:REF

chr1 146723013:146723198
methylatedunmethylatedunknownpositionproportionpatterns123146723013146723037146723047146723052146723054146723058146723063146723065146723081146723116146723147146723156146723159146723165146723182146723198204060read count

chr1:166243053-166249084:-:L1HS:REF

chr1 166248880:166249065
methylatedunmethylatedunknownpositionproportionpatterns1234516624888016624890416624891416624891916624892116624892516624893016624894816624898316624901416624902316624902616624903216624904916624906520406080100read count

chr1:174590323-174596379:-:L1HS:REF

chr1 174596176:174596359
methylatedunmethylatedunknownpositionproportionpatterns1234561745961761745962001745962101745962151745962171745962211745962421745962771745963081745963171745963261745963431745963595101520read count

chr1:179606225-179606227:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234223855616473104139157162166168173183207102030405060read count

chr1:180866811-180872843:-:L1HS:REF

chr1 180872638:180872823
methylatedunmethylatedunknownpositionproportionpatterns12345180872638180872662180872672180872677180872679180872683180872688180872706180872741180872772180872781180872784180872790180872807180872823204060read count

chr1:184845616-184851641:+:L1HS:REF

chr1 184845631:184845816
methylatedunmethylatedunknownpositionproportionpatterns12345618484563118484564718484566418484567018484567318484568218484571318484574818484576618484577118484577518484577718484578218484579218484581651015read count

chr1:187343764-187349794:-:L1HS:REF

chr1 187349590:187349775
methylatedunmethylatedunknownpositionproportionpatterns1234518734959018734961418734962418734962918734963118734964018734965818734969318734972418734973318734973618734974218734977510203040read count

chr1:187597671-187603699:+:L1HS:REF

chr1 187597689:187597874
methylatedunmethylatedunknownpositionproportionpatterns123418759768918759770518759772218759772818759773118759774018759777118759780618759782218759782418759782918759783518759784018759785018759787451015202530read count

chr1:193717837-193723892:-:L1HS:REF

chr1 193723689:193723874
methylatedunmethylatedunknownpositionproportionpatterns12319372368919372371319372372419372372819372373019372373419372373919372375719372382319372383219372383519372384119372385819372387420406080100read count

chr1:196219370-196225402:-:L1HS:REF

chr1 196225197:196225382
methylatedunmethylatedunknownpositionproportionpatterns121962251971962252211962252311962252361962252381962252421962252471962253001962253311962253401962253431962253491962253661962253821020304050read count

chr1:197707714-197713746:+:L1HS:REF

chr1 197707735:197707920
methylatedunmethylatedunknownpositionproportionpatterns12345619770773519770775119770776819770777419770777719770778619770781719770785219770787019770787519770787919770788119770788619770789619770792020406080100read count

chr1:197802331-197803141:+:L1HS:REF

chr1 197802351:197802529
methylatedunmethylatedunknownpositionproportionpatterns1234567891978023511978023641978023901978024331978024681978024861978024911978024951978024971978025295101520read count

chr1:209913771-209919823:-:L1HS:REF

chr1 209919652:209919803
methylatedunmethylatedunknownpositionproportionpatterns12342099196522099196572099196592099196632099196682099196862099197212099197612099197642099197702099197872099198031020304050read count

chr1:216485645-216487614:+:L1HS:REF

chr1 216485699:216485821
methylatedunmethylatedunknownpositionproportionpatterns12345216485699216485702216485711216485742216485795216485800216485804216485806216485811216485821102030read count

chr1:220245155-220246008:+:L1HS:REF

chr1 220245175:220245360
methylatedunmethylatedunknownpositionproportionpatterns12345622024517522024519122024522622024525722024529222024530822024531022024531922024532122024532622024533622024536050100150read count

chr1:237019467-237025494:-:L1HS:REF

chr1 237025316:237025477
methylatedunmethylatedunknownpositionproportionpatterns123423702531623702532623702533123702533323702533723702534223702536023702539523702542623702543523702543823702544423702546123702547720406080100120read count

chr1:237075264-237081293:+:L1HS:REF

chr1 237075264:237075444
methylatedunmethylatedunknownpositionproportionpatterns123237075264237075283237075299237075316237075322237075325237075334237075366237075400237075418237075423237075427237075429237075434237075444102030405060read count

chr1:239623498-239629523:-:L1HS:REF

chr1 239629323:239629508
methylatedunmethylatedunknownpositionproportionpatterns12345623962932323962934723962935723962936223962936423962936823962937323962937523962939123962942623962945723962946623962946923962947523962949223962950820406080read count

chr2:11000000-11002136:-:L1HS:REF

chr2 11001931:11002116
methylatedunmethylatedunknownpositionproportionpatterns123110019311100195511001965110019701100197211001976110019811100199911002034110020651100207411002083110021001100211620406080read count

chr2:16593725-16599758:-:L1HS:REF

chr2 16599553:16599738
methylatedunmethylatedunknownpositionproportionpatterns1234561659955316599577165995871659959216599594165995981659960316599621165996561659968716599696165997051659972216599738102030read count

chr2:22968126-22968128:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567822385561647310413915716216616817318320751015202530read count

chr2:36112506-36118537:-:L1HS:REF

chr2 36118332:36118517
methylatedunmethylatedunknownpositionproportionpatterns1234567361183323611835636118366361183713611837336118377361183823611840036118435361184663611847536118478361184843611850136118517204060read count

chr2:71411474-71417501:-:L1HS:REF

chr2 71417298:71417483
methylatedunmethylatedunknownpositionproportionpatterns12347141729871417322714173327141733771417339714173437141734871417350714173667141740171417432714174417141744471417450714174677141748320406080read count

chr2:81870918-81870920:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123422385561647310413915716216616817318320710203040read count

chr2:86655238-86661268:-:L1HS:REF

chr2 86661064:86661233
methylatedunmethylatedunknownpositionproportionpatterns12345678910111286661064866610888666109886661105866611148666113286661198866612078666121086661216866612331.01.52.02.53.0read count

chr2:102295989-102295991:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123452238556164731041391571621661681731832072468read count

chr2:102566355-102572385:-:L1HS:REF

chr2 102572181:102572365
methylatedunmethylatedunknownpositionproportionpatterns123456710257218110257220410257221410257221910257222110257222510257223010257224810257228310257232310257233210257234910257236520406080read count

chr2:112503812-112509845:-:L1HS:REF

chr2 112509636:112509826
methylatedunmethylatedunknownpositionproportionpatterns1234511250963611250966011250967011250967511250967711250968111250968611250970411250973911250977511250978411250978711250979311250981011250982624681012read count

chr2:126178048-126184064:-:L1HS:REF

chr2 126183883:126184044
methylatedunmethylatedunknownpositionproportionpatterns123451261838831261838931261839001261839041261839091261839271261839621261839931261840021261840051261840111261840442468read count

chr2:129415687-129417400:-:L1HS:REF

chr2 129417197:129417381
methylatedunmethylatedunknownpositionproportionpatterns123456712941719712941722112941723512941723712941724112941724612941726412941729912941733012941733912941734212941734812941736512941738120406080100read count

chr2:129685897-129687022:-:L1HS:REF

chr2 129686831:129687016
methylatedunmethylatedunknownpositionproportionpatterns12312968683112968685512968686512968687012968687212968687612968688112968689912968693412968696512968697412968697712968698312968700012968701620406080100read count

chr2:143860956-143866987:+:L1HS:REF

chr2 143860977:143861162
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151438609771438609931438610101438610161438610191438610281438610591438610941438611121438611171438611211438611231438611381438611621.01.21.41.61.82.0read count

chr2:148188745-148194773:+:L1HS:REF

chr2 148188764:148188949
methylatedunmethylatedunknownpositionproportionpatterns1234567148188764148188780148188797148188803148188806148188815148188846148188881148188899148188904148188908148188910148188915148188925148188949246810read count

chr2:153007766-153013796:-:L1HS:REF

chr2 153013593:153013778
methylatedunmethylatedunknownpositionproportionpatterns123415301359315301361715301362715301363215301363415301363815301364315301366115301366515301369615301373615301373915301374515301376215301377820406080read count

chr2:157566353-157572377:+:L1HS:REF

chr2 157566368:157566529
methylatedunmethylatedunknownpositionproportionpatterns12315756636815756638415756640115756640715756641015756641915756645015756646615756648515756650815756651215756651415756651915756652920406080read count

chr2:160114516-160120680:+:L1HS:REF

chr2 160114537:160114715
methylatedunmethylatedunknownpositionproportionpatterns1231601145371601145701601145791601146191601146701601146721601146771601146811601146831601146981601147151234567read count

chr2:161892394-161892396:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345223855616473104139157162166168173183207510152025read count

chr2:166988454-166994509:+:L1HS:REF

chr2 166988472:166988657
methylatedunmethylatedunknownpositionproportionpatterns123451669884721669884881669885051669885111669885141669885541669885891669886071669886121669886161669886181669886231669886331669886571020304050read count

chr2:169248623-169254656:+:L1HS:REF

chr2 169248643:169248827
methylatedunmethylatedunknownpositionproportionpatterns1234516924864316924865916924867616924868216924868516924869416924872416924875916924877716924878216924878616924878816924879316924880316924882724681012read count

chr2:172315270-172321297:+:L1HS:REF

chr2 172315270:172315472
methylatedunmethylatedunknownpositionproportionpatterns12345617231527017231528717231530317231532017231532617231532917231533817231536917231540417231542217231542717231543117231543317231543817231544817231547210203040read count

chr2:177973073-177979090:+:L1HS:REF

chr2 177973094:177973279
methylatedunmethylatedunknownpositionproportionpatterns12345617797309417797311017797312717797313317797313617797314517797317617797321117797322917797323417797323817797324017797324517797325517797327951015202530read count

chr2:180833661-180839689:-:L1HS:REF

chr2 180839485:180839670
methylatedunmethylatedunknownpositionproportionpatterns123418083948518083950918083952418083952618083953018083953518083953718083955318083958818083961918083962818083963118083963718083965418083967020406080100120read count

chr2:193170704-193171720:+:L1HS:REF

chr2 193170741:193170910
methylatedunmethylatedunknownpositionproportionpatterns12319317074119317075819317076419317076719317077619317080719317085819317086019317086519317086919317087119317087619317088619317091020406080read count

chr2:193212420-193218448:-:L1HS:REF

chr2 193218243:193218412
methylatedunmethylatedunknownpositionproportionpatterns12341932182431932182671932182771932182821932182841932182881932182931932182951932183111932183461932183771932183861932183891932183951932184121020304050read count

chr2:196905587-196911636:+:L1HS:REF

chr2 196905608:196905793
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121969056081969056241969056411969056471969056501969056591969057251969057411969057431969057481969057521969057541969057591969057691969057931.01.52.02.53.0read count

chr2:213567231-213573262:-:L1HS:REF

chr2 213573057:213573243
methylatedunmethylatedunknownpositionproportionpatterns12345678910111221357305721357305921357308321357310021357310421357310921357311121357312721357316221357319221357320121357320421357321021357322721357324351015202530read count

chr2:230337069-230342513:-:L1HS:REF

chr2 230342314:230342499
methylatedunmethylatedunknownpositionproportionpatterns12323034231423034233823034234923034235323034235523034235923034236423034238223034245723034246023034246623034248323034249920406080100120read count

chr2:232149196-232155229:-:L1HS:REF

chr2 232155024:232155193
methylatedunmethylatedunknownpositionproportionpatterns123456789101123215502423215504823215505823215506323215506523215506923215509223215512723215515823215516723215517023215517623215519310203040read count

chr3:3963076-3969110:+:L1HS:REF

chr3 3963095:3963280
methylatedunmethylatedunknownpositionproportionpatterns123453963095396311139631283963134396313739631773963212396323039632353963239396324139632463963256396328020406080read count

chr3:4916534-4922591:+:L1HS:REF

chr3 4916534:4916740
methylatedunmethylatedunknownpositionproportionpatterns123456789491653449165554916571491658849165944916597491660649166374916658491667249166884916695491669949167014916705491671649167405101520read count

chr3:11488672-11492490:-:L1HS:REF

chr3 11492291:11492437
methylatedunmethylatedunknownpositionproportionpatterns12345678910114922911149230811492318114923231149232911492353114924191149243751015202530read count

chr3:17858274-17861391:-:L1HS:REF

chr3 17861189:17861374
methylatedunmethylatedunknownpositionproportionpatterns117861189178612231786122817861230178612341786123917861241178612571786129217861323178613321786133517861341178613581786137450100150read count

chr3:18516080-18520244:+:L1HS:REF

chr3 18516101:18516286
methylatedunmethylatedunknownpositionproportionpatterns1218516101185161431851618318516218185162341851624718516252185162791851628650100150read count

chr3:26036528-26042769:-:L1HS:REF

chr3 26042570:26042749
methylatedunmethylatedunknownpositionproportionpatterns123260425702604257926042604260426672604269826042707260427102604274920406080read count

chr3:29108111-29112113:-:L1HS:REF

chr3 29111933:29112094
methylatedunmethylatedunknownpositionproportionpatterns123291119332911194329111948291119542911195929111977291120432911205229112055291120612911209420406080100read count

chr3:35454617-35458296:+:L1HS:REF

chr3 35454630:35454816
methylatedunmethylatedunknownpositionproportionpatterns1235454630354546633545466935454713354547663545477535454782354548093545481620406080100read count

chr3:46783105-46789138:-:L1HS:REF

chr3 46788933:46789118
methylatedunmethylatedunknownpositionproportionpatterns124678893346788957467889674678897246788974467889784678898346789001467890364678906746789076467890794678908546789102467891181020304050read count

chr3:54394322-54400323:-:L1HS:REF

chr3 54400121:54400306
methylatedunmethylatedunknownpositionproportionpatterns1234565440012154400145544001555440016054400162544001665440017154400189544002245440025554400267544002735440029054400306102030read count

chr3:55754551-55754553:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123452238556164731041391571621661681731832071020304050read count

chr3:77763677-77769678:-:L1HS:REF

chr3 77769474:77769658
methylatedunmethylatedunknownpositionproportionpatterns123777694747776949777769507777695127776951477769518777695417776957677769607777696197776962577769642777696581020304050read count

chr3:80541011-80541013:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12322385561647310413915716216616817318320751015202530read count

chr3:82337499-82339442:+:L1HS:REF

chr3 82337499:82337705
methylatedunmethylatedunknownpositionproportionpatterns1234823374998233753682337559823375628233760282337637823376538233765582337660823376648233766682337671823376818233770510203040read count

chr3:85527417-85527419:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192022385561647310413915716216616817318320751015read count

chr3:89460825-89466856:-:L1HS:REF

chr3 89466652:89466836
methylatedunmethylatedunknownpositionproportionpatterns12345678910118946665289466676894666868946669189466693894666978946670289466720894667558946678589466794894667978946680389466820894668361020304050read count

chr3:90169567-90175598:-:L1HS:REF

chr3 90175417:90175578
methylatedunmethylatedunknownpositionproportionpatterns1234901754179017543290175434901754389017544390175461901754969017553690175539901755459017556290175578204060read count

chr3:103556537-103562569:-:L1HS:REF

chr3 103562364:103562549
methylatedunmethylatedunknownpositionproportionpatterns12345678103562364103562398103562403103562405103562409103562414103562432103562467103562498103562507103562510103562516103562533103562549102030405060read count

chr3:108749400-108755425:+:L1HS:REF

chr3 108749400:108749599
methylatedunmethylatedunknownpositionproportionpatterns1234567891087494001087494141087494301087494471087494531087494561087494651087494961087495311087495491087495541087495581087495601087495651087495751087495991234567read count

chr3:109199872-109205903:+:L1HS:REF

chr3 109199872:109200077
methylatedunmethylatedunknownpositionproportionpatterns12345610919987210919989310919990910919992610919993210919993510919994410920000910920002710920003210920003610920003810920004310920005310920007751015202530read count

chr3:110888814-110890548:+:L1HS:REF

chr3 110888833:110889017
methylatedunmethylatedunknownpositionproportionpatterns123456110888833110888850110888866110888872110888875110888884110888914110888965110888967110888972110888976110888978110888983110888993110889017204060read count

chr3:116359999-116366026:+:L1HS:REF

chr3 116360017:116360201
methylatedunmethylatedunknownpositionproportionpatterns123456711636001711636003311636005011636005611636005911636006811636013311636015111636015611636016011636016211636016711636017711636020151015202530read count

chr3:123871878-123871880:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12322385561647310413915716216616817318320724681012read count

chr3:132946006-132952034:-:L1HS:REF

chr3 132951831:132952016
methylatedunmethylatedunknownpositionproportionpatterns12345678910111329518311329518551329518651329518701329518721329518761329518811329518991329519341329519541329519651329519741329519771329519831329520001329520161234567read count

chr3:136479056-136485103:-:L1HS:REF

chr3 136484898:136485083
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314136484898136484922136484932136484937136484939136484943136484948136484950136485001136485032136485041136485044136485050136485067136485083510152025read count

chr3:136963693-136969736:-:L1HS:REF

chr3 136969518:136969716
methylatedunmethylatedunknownpositionproportionpatterns1234567813696951813696954213696955213696955713696955913696956313696956813696958613696962113696965213696966113696966413696967013696968713696971610203040read count

chr3:139590956-139596035:+:L1HS:REF

chr3 139590976:139591161
methylatedunmethylatedunknownpositionproportionpatterns12345139590976139590992139591015139591027139591058139591093139591111139591116139591120139591122139591127139591137139591161102030405060read count

chr3:158019676-158025704:+:L1HS:REF

chr3 158019697:158019882
methylatedunmethylatedunknownpositionproportionpatterns1234158019697158019713158019736158019739158019748158019779158019814158019832158019837158019841158019843158019848158019858158019882510152025read count

chr3:159095379-159101394:-:L1HS:REF

chr3 159101190:159101374
methylatedunmethylatedunknownpositionproportionpatterns123415910119015910121415910122415910122915910123115910123515910124015910125815910129315910132315910133215910133515910135815910137410203040read count

chr3:163236941-163242962:+:L1HS:REF

chr3 163236941:163237141
methylatedunmethylatedunknownpositionproportionpatterns1234516323694116323695616323697216323698916323699516323699816323700716323703816323707316323709116323709616323710016323710216323710716323711716323714110203040read count

chr3:164291525-164296426:+:L1HS:REF

chr3 164291546:164291731
methylatedunmethylatedunknownpositionproportionpatterns12345678910111642915461642915851642915881642916791642916811642916861642916881642916901642916921642916971642917241642917315101520read count

chr3:190964647-190965526:-:L1HS:REF

chr3 190965339:190965524
methylatedunmethylatedunknownpositionproportionpatterns1234190965339190965346190965373190965378190965384190965389190965391190965407190965442190965473190965482190965485190965508190965524102030405060read count

chr4:14755114-14761144:+:L1HS:REF

chr4 14755133:14755318
methylatedunmethylatedunknownpositionproportionpatterns12345614755133147551491475516614755172147551751475521514755250147552661475526814755279147552841475529414755318204060read count

chr4:15841546-15847572:+:L1HS:REF

chr4 15841546:15841752
methylatedunmethylatedunknownpositionproportionpatterns1234561584154615841549158415671584158315841600158416061584160915841618158416491584168415841707158417111584171315841718158417281584175210203040read count

chr4:16942776-16944630:+:L1HS:REF

chr4 16942795:16942979
methylatedunmethylatedunknownpositionproportionpatterns1234567816942795169428111694282816942834169428371694284616942876169429111694292916942934169429381694294016942945169429551694297910203040read count

chr4:19077911-19083929:-:L1HS:REF

chr4 19083726:19083911
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819202122231908372619083750190837601908376719083771190837761908379419083829190838601908386919083872190838781908389519083911246810read count

chr4:21159390-21165421:+:L1HS:REF

chr4 21159411:21159595
methylatedunmethylatedunknownpositionproportionpatterns12345211594112115942721159444211594502115945321159462211594922115952721159545211595502115955421159556211595612115957121159595204060read count

chr4:23614771-23620793:+:L1HS:REF

chr4 23614792:23614978
methylatedunmethylatedunknownpositionproportionpatterns12345672361479223614808236148252361483423614875236149102361492823614933236149372361493923614944236149542361497851015202530read count

chr4:52538471-52544498:+:L1HS:REF

chr4 52538490:52538675
methylatedunmethylatedunknownpositionproportionpatterns1234525384905253850652538523525385295253853252538541525386075253863052538634525386365253864152538651525386751020304050read count

chr4:52816456-52822486:+:L1HS:REF

chr4 52816477:52816662
methylatedunmethylatedunknownpositionproportionpatterns12345528164775281649352816510528165165281651952816528528165595281659452816612528166175281662152816623528166285281663852816662102030read count

chr4:53502121-53502123:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141516171819202122232425262728293031323334352238556164731041391571621661681731832071.01.52.02.53.03.54.0read count

chr4:57562316-57568347:-:L1HS:REF

chr4 57568142:57568327
methylatedunmethylatedunknownpositionproportionpatterns1234575681425756816657568176575681815756818357568187575681925756821057568245575682855756828857568294575683115756832720406080read count

chr4:59078847-59084877:+:L1HS:REF

chr4 59078865:59079050
methylatedunmethylatedunknownpositionproportionpatterns1234559078865590788815907889859078904590789075907891659078947590789825907900059079005590790095907901159079016590790265907905020406080read count

chr4:61939927-61945962:-:L1HS:REF

chr4 61945757:61945942
methylatedunmethylatedunknownpositionproportionpatterns12345619457576194578161945791619457966194579861945802619458076194582561945860619458916194590061945903619459096194594220406080read count

chr4:62726948-62732969:-:L1HS:REF

chr4 62732765:62732950
methylatedunmethylatedunknownpositionproportionpatterns12345627327656273278962732799627328046273280662732810627328156273283362732868627328996273290862732911627329176273295010203040read count

chr4:69664009-69667565:+:L1HS:REF

chr4 69664029:69664207
methylatedunmethylatedunknownpositionproportionpatterns1234696640296966404569664062696640686966408069664111696641626966416469664173696641756966420720406080100120read count

chr4:70015396-70019676:-:L1HS:REF

chr4 70019471:70019640
methylatedunmethylatedunknownpositionproportionpatterns1270019471700194957001950570019521700195747001960570019617700196237001964020406080100read count

chr4:74717539-74723587:-:L1HS:REF

chr4 74723382:74723567
methylatedunmethylatedunknownpositionproportionpatterns12345678910111274723382747234067472341674723423747234277472343274723450747234857472351674723525747235287472353474723551747235671.01.52.02.53.0read count

chr4:78105735-78111765:+:L1HS:REF

chr4 78105755:78105940
methylatedunmethylatedunknownpositionproportionpatterns178105755781057717810578878105794781057977810580678105837781058727810588878105890781058957810589978105901781059067810594020406080read count

chr4:79704552-79710581:+:L1HS:REF

chr4 79704570:79704755
methylatedunmethylatedunknownpositionproportionpatterns1234567897970457079704586797046037970460979704612797046217970465279704687797047037970470579704710797047147970471679704721797047317970475551015read count

chr4:79937715-79943746:+:L1HS:REF

chr4 79937734:79937918
methylatedunmethylatedunknownpositionproportionpatterns1234799377347993775079937767799377737993777679937785799378157993785079937868799378737993787979937884799378947993791820406080read count

chr4:79966907-79972933:+:L1HS:REF

chr4 79966907:79967111
methylatedunmethylatedunknownpositionproportionpatterns1234567996690779966927799669607996696679966969799669787996700879967043799670617996706679967070799670727996707779967087799671111020304050read count

chr4:87347103-87353146:-:L1HS:REF

chr4 87352942:87353126
methylatedunmethylatedunknownpositionproportionpatterns123456787352942873529668735297687352981873529838735298787352992873530108735304587353075873530848735308787353093873531108735312620406080read count

chr4:91437491-91443691:+:L1HS:REF

chr4 91437510:91437696
methylatedunmethylatedunknownpositionproportionpatterns123914375109143752691437543914375499143756191437627914376469143765591437662914376729143769620406080read count

chr4:91978211-91984413:+:L1HS:REF

chr4 91978211:91978393
methylatedunmethylatedunknownpositionproportionpatterns12345919782119197823291978248919782659197827191978283919783499197836791978372919783769197837891978383919783931020304050read count

chr4:93608283-93614338:-:L1HS:REF

chr4 93614133:93614318
methylatedunmethylatedunknownpositionproportionpatterns123459361413393614157936141729361417493614178936141839361420193614267936142769361427993614285936143029361431820406080read count

chr4:93638307-93644337:-:L1HS:REF

chr4 93644134:93644318
methylatedunmethylatedunknownpositionproportionpatterns1234936441349364415893644168936441739364417593644179936441849364420293644237936442679364427693644279936442859364430293644318204060read count

chr4:98592435-98598463:-:L1HS:REF

chr4 98598258:98598443
methylatedunmethylatedunknownpositionproportionpatterns12345698598258985982829859829298598297985982999859830398598308985983269859836198598392985984019859840498598410985984279859844324681012read count

chr4:106571057-106577070:-:L1HS:REF

chr4 106576868:106577053
methylatedunmethylatedunknownpositionproportionpatterns12310657686810657689210657690210657690710657690910657691310657691810657693610657700210657701110657701410657702010657703710657705320406080read count

chr4:110690112-110693684:-:L1HS:REF

chr4 110693489:110693667
methylatedunmethylatedunknownpositionproportionpatterns12345678910111106934891106935061106935211106935271106935321106935341106935851106936251106936281106936675101520read count

chr4:111894801-111900831:+:L1HS:REF

chr4 111894820:111895005
methylatedunmethylatedunknownpositionproportionpatterns123411189482011189483611189485311189485911189486211189490211189493711189495311189496011189496611189497111189498111189500520406080100120read count

chr4:119948726-119954758:-:L1HS:REF

chr4 119954577:119954738
methylatedunmethylatedunknownpositionproportionpatterns1234511995457711995459211995459411995459811995460311995462111995465611995468711995469611995469911995470511995472211995473820406080100120read count

chr4:135178140-135183747:-:L1HS:REF

chr4 135183555:135183733
methylatedunmethylatedunknownpositionproportionpatterns1234561351835551351835871351835891351835931351835981351836121351836161351836511351836821351836941351837001351837171351837331020304050read count

chr4:136293494-136299546:-:L1HS:REF

chr4 136299344:136299528
methylatedunmethylatedunknownpositionproportionpatterns12136299344136299368136299378136299383136299385136299389136299394136299412136299447136299477136299486136299489136299495136299512136299528204060read count

chr4:137496278-137500000:+:L1HS:REF

chr4 137496287:137496472
methylatedunmethylatedunknownpositionproportionpatterns12345137496287137496303137496320137496326137496329137496338137496369137496404137496420137496422137496426137496433137496438137496448137496472204060read count

chr4:144809658-144810951:+:L1HS:REF

chr4 144809679:144809864
methylatedunmethylatedunknownpositionproportionpatterns123456144809679144809712144809718144809730144809761144809796144809812144809814144809819144809823144809825144809830144809840144809864204060read count

chr4:146304143-146304145:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345672238556164731041391571621661681731832072468read count

chr4:166449405-166449678:-:L1HS:REF

chr4 166449477:166449662
methylatedunmethylatedunknownpositionproportionpatterns12345166449477166449501166449511166449516166449518166449522166449527166449545166449580166449611166449620166449623166449646166449662102030read count

chr4:166569976-166576007:+:L1HS:REF

chr4 166569997:166570181
methylatedunmethylatedunknownpositionproportionpatterns1234561665699971665700131665700301665700361665700391665700481665700781665701131665701311665701361665701401665701421665701471665701571665701811020304050read count

chr4:166755895-166761908:+:L1HS:REF

chr4 166755911:166756079
methylatedunmethylatedunknownpositionproportionpatterns11667559111667559281667559341667559371667559461667559761667560111667560291667560341667560381667560401667560451667560551667560791020304050read count

chr4:166850455-166851634:+:L1HS:REF

chr4 166850455:166850659
methylatedunmethylatedunknownpositionproportionpatterns1234166850455166850474166850507166850516166850556166850587166850607166850614166850618166850620166850635166850652166850659102030405060read count

chr4:169515501-169521532:-:L1HS:REF

chr4 169521328:169521512
methylatedunmethylatedunknownpositionproportionpatterns123456789169521328169521351169521361169521366169521368169521372169521377169521395169521430169521461169521470169521473169521479169521496169521512204060read count

chr5:4500001-4502372:-:L1HS:REF

chr5 4502167:4502352
methylatedunmethylatedunknownpositionproportionpatterns123445021674502191450220145022124502217450221945022354502270450230145023104502336450235220406080100120read count

chr5:13416497-13422525:+:L1HS:REF

chr5 13416518:13416703
methylatedunmethylatedunknownpositionproportionpatterns12313416518134165341341655113416560134165691341660013416635134166531341665813416662134166641341666913416679134166871341670310203040read count

chr5:15906515-15912550:-:L1HS:REF

chr5 15912346:15912515
methylatedunmethylatedunknownpositionproportionpatterns12159123461591237015912380159123851591238715912391159123961591241415912449159124801591248915912492159124981591251520406080100read count

chr5:21207622-21207624:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234522556164731041391571621661681731832075101520read count

chr5:34147845-34154031:+:L1HS:REF

chr5 34147845:34148048
methylatedunmethylatedunknownpositionproportionpatterns1234567341478453414786434147880341478973414790334147906341479153414794534147980341479983414800734148009341480143414804810203040read count

chr5:52086499-52088220:-:L1HS:REF

chr5 52088022:52088209
methylatedunmethylatedunknownpositionproportionpatterns123456520880225208803952088054520880565208806552088083520881495208820910203040read count

chr5:58384174-58390206:+:L1HS:REF

chr5 58384174:58384380
methylatedunmethylatedunknownpositionproportionpatterns123458384174583841955838421158384228583842345838423758384246583842775838431258384330583843355838433958384346583843565838438010203040read count

chr5:66750283-66754219:+:L1HS:REF

chr5 66750304:66750488
methylatedunmethylatedunknownpositionproportionpatterns126675030466750337667503436675034666750355667503856675042066750436667504436675044966750454667504646675048820406080100read count

chr5:79778884-79784938:-:L1HS:REF

chr5 79784739:79784924
methylatedunmethylatedunknownpositionproportionpatterns1797847397978476379784773797847787978478479784789797847917978480779784842797848737978488279784885797848917978490879784924102030405060read count

chr5:81616090-81622140:+:L1HS:REF

chr5 81616109:81616294
methylatedunmethylatedunknownpositionproportionpatterns123481616109816161258161614281616148816161518161616081616191816162268161624481616249816162538161625581616260816162708161629420406080100read count

chr5:86510690-86516743:+:L1HS:REF

chr5 86510711:86510896
methylatedunmethylatedunknownpositionproportionpatterns12348651071186510744865107508651075386510762865107938651082886510846865108518651085586510857865108628651087286510896204060read count

chr5:90154963-90154965:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234522385561647310413915716216616817318320710203040read count

chr5:102131356-102137385:+:L1HS:REF

chr5 102131377:102131562
methylatedunmethylatedunknownpositionproportionpatterns1210213137710213139310213141010213141610213141910213145910213149410213151210213151710213152110213152310213152810213153810213156220406080read count

chr5:102189483-102194435:+:L1HS:REF

chr5 102189502:102189687
methylatedunmethylatedunknownpositionproportionpatterns1234102189502102189518102189535102189541102189544102189553102189584102189619102189637102189642102189646102189648102189653102189663102189687102030405060read count

chr5:105513236-105519274:-:L1HS:REF

chr5 105519069:105519254
methylatedunmethylatedunknownpositionproportionpatterns12345105519069105519093105519103105519108105519114105519119105519137105519172105519203105519212105519215105519221105519238105519254510152025read count

chr5:106599671-106599673:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234522385561647310413915716216616817318320710203040read count

chr5:109259387-109265418:+:L1HS:REF

chr5 109259408:109259592
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223242526272829303132333435363738394041421092594081092594241092594411092594471092594501092594591092594891092595241092595421092595471092595511092595531092595581092595681092595921.01.21.41.61.82.0read count

chr5:111302238-111308262:+:L1HS:REF

chr5 111302252:111302437
methylatedunmethylatedunknownpositionproportionpatterns12311130225211130226811130228511130229111130229411130230311130233411130236911130238711130239211130239611130240311130241311130243720406080read count

chr5:116113364-116113366:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234562238556164731041391571621661681731832075101520read count

chr5:119684785-119690814:-:L1HS:REF

chr5 119690612:119690797
methylatedunmethylatedunknownpositionproportionpatterns1234511969061211969063611969064611969065111969065311969065711969066411969068011969071511969075511969078111969079720406080read count

chr5:133583288-133589299:+:L1HS:REF

chr5 133583306:133583489
methylatedunmethylatedunknownpositionproportionpatterns1234513358330613358332213358333913358334513358334813358335713358338813358342313358343913358344413358344813358345013358345513358346513358348951015202530read count

chr5:137679083-137679085:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161722385561647310413915716216616817318320751015read count

chr5:146609485-146615534:+:L1HS:REF

chr5 146609500:146609685
methylatedunmethylatedunknownpositionproportionpatterns1234146609500146609516146609533146609539146609542146609551146609582146609617146609635146609640146609644146609646146609651146609661146609685204060read count

chr5:152886441-152892473:-:L1HS:REF

chr5 152892268:152892453
methylatedunmethylatedunknownpositionproportionpatterns1234561528922681528922921528923021528923071528923091528923361528923711528924021528924111528924141528924201528924371528924531020304050read count

chr5:153070982-153077008:-:L1HS:REF

chr5 153076809:153076994
methylatedunmethylatedunknownpositionproportionpatterns123456153076809153076833153076843153076848153076850153076854153076877153076912153076943153076952153076955153076961153076978153076994102030405060read count

chr5:156061919-156067966:-:L1HS:REF

chr5 156067762:156067946
methylatedunmethylatedunknownpositionproportionpatterns12345678915606776215606778615606779615606780115606780315606780715606781215606783015606786515606789515606790415606790715606791315606793015606794651015read count

chr5:160709608-160715639:-:L1HS:REF

chr5 160715436:160715621
methylatedunmethylatedunknownpositionproportionpatterns123416071543616071546016071547016071547516071547716071548116071548616071550416071553916071557016071557916071558216071558816071560516071562120406080read count

chr5:162530742-162531677:-:L1HS:REF

chr5 162531476:162531644
methylatedunmethylatedunknownpositionproportionpatterns1216253147616253151716253157916253160016253160916253162116253164420406080100read count

chr5:166141191-166145692:-:L1HS:REF

chr5 166145506:166145691
methylatedunmethylatedunknownpositionproportionpatterns12345166145506166145540166145545166145547166145552166145556166145558166145574166145609166145640166145649166145652166145658166145675166145691204060read count

chr5:166966760-166972815:-:L1HS:REF

chr5 166972613:166972798
methylatedunmethylatedunknownpositionproportionpatterns1234516697261316697263716697264716697265216697265416697265816697266316697268116697271616697275616697275916697276516697278216697279820406080read count

chr5:173402796-173408828:-:L1HS:REF

chr5 173408623:173408808
methylatedunmethylatedunknownpositionproportionpatterns12317340862317340864717340865717340866217340866417340866817340867317340869117340872617340875717340876617340876917340877517340879217340880820406080100120read count

chr5:177772245-177778274:+:L1HS:REF

chr5 177772266:177772451
methylatedunmethylatedunknownpositionproportionpatterns1234517777226617777228217777229917777230517777230817777231717777234817777238317777240117777240617777241017777241217777241717777242717777245110203040read count

chr6:2417774-2423803:-:L1HS:REF

chr6 2423598:2423783
methylatedunmethylatedunknownpositionproportionpatterns12324235982423622242363224236372423639242364324236482423666242370124237322423741242374424237502423767242378320406080100read count

chr6:19764892-19770918:+:L1HS:REF

chr6 19764907:19765092
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131419764907197649231976494019764946197649491976495819764989197650241976504219765047197650511976505819765068197650925101520read count

chr6:51874783-51880802:+:L1HS:REF

chr6 51874786:51874955
methylatedunmethylatedunknownpositionproportionpatterns123456789105187478651874803518748095187481251874821518748525187488751874905518749105187491451874916518749215187493151874955102030read count

chr6:69495362-69500000:+:L1HS:REF

chr6 69495422:69495534
methylatedunmethylatedunknownpositionproportionpatterns123469495422694954256949546569495516694955236949553450100150read count

chr6:70010347-70016552:+:L1HS:REF

chr6 70010347:70010552
methylatedunmethylatedunknownpositionproportionpatterns12370010347700103687001038470010401700104077001041070010419700104497001048470010502700105077001051170010513700105177001052870010552204060read count

chr6:72988654-72994686:-:L1HS:REF

chr6 72994481:72994666
methylatedunmethylatedunknownpositionproportionpatterns12345678910729944817299450572994520729945227299452672994531729945497299458472994615729946247299462772994633729946507299466610203040read count

chr6:76875759-76877075:-:L1HS:REF

chr6 76876870:76877039
methylatedunmethylatedunknownpositionproportionpatterns1234567891011768768707687689476876904768769117687691576876920768769387687697376877004768770137687702276877039510152025read count

chr6:83333952-83339981:+:L1HS:REF

chr6 83333973:83334158
methylatedunmethylatedunknownpositionproportionpatterns12345678910833339738333400683334012833340158333402483334055833340908333410683334113833341178333411983334124833341348333415851015202530read count

chr6:84608436-84614463:+:L1HS:REF

chr6 84608457:84608642
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920846084578460847384608490846084998460853984608574846085928460859784608601846086038460860884608618846086425101520read count

chr6:86000000-86005073:-:L1HS:REF

chr6 86004869:86005053
methylatedunmethylatedunknownpositionproportionpatterns123456789101186004869860048938600490386004908860049108600491486004915860049198600493786004972860050028600501186005014860050208600503786005053246810read count

chr6:93865738-93871783:-:L1HS:REF

chr6 93871578:93871763
methylatedunmethylatedunknownpositionproportionpatterns12393871578938716029387161293871617938716199387164693871681938717129387172193871724938717309387174793871763204060read count

chr6:94197995-94204060:-:L1HS:REF

chr6 94203855:94204040
methylatedunmethylatedunknownpositionproportionpatterns123494203855942038799420388994203894942038969420390094203905942039239420395894203989942039989420400194204007942040249420404020406080read count

chr6:98703059-98708329:+:L1HS:REF

chr6 98703077:98703262
methylatedunmethylatedunknownpositionproportionpatterns123459870307798703093987031109870311698703119987031289870313098703159987031949870321098703217987032219870322398703228987032389870326220406080100read count

chr6:112703745-112709778:+:L1HS:REF

chr6 112703766:112703951
methylatedunmethylatedunknownpositionproportionpatterns123112703766112703782112703799112703805112703808112703848112703883112703901112703906112703910112703912112703917112703927112703951102030read count

chr6:117102131-117108163:+:L1HS:REF

chr6 117102152:117102313
methylatedunmethylatedunknownpositionproportionpatterns1231171021521171021681171021851171021911171021941171022031171022341171022871171022961171022981171023031171023132468read count

chr6:121162716-121168725:+:L1HS:REF

chr6 121162730:121162915
methylatedunmethylatedunknownpositionproportionpatterns12312116273012116276312116276912116277212116281212116284712116286512116287012116287412116287612116288112116289112116291510203040read count

chr6:123532791-123532793:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212238556164731041391571621661681731832075101520read count

chr6:128998385-129000000:+:L1HS:REF

chr6 128998406:128998590
methylatedunmethylatedunknownpositionproportionpatterns12341289984061289984221289984451289984481289984571289984871289985221289985401289985451289985491289985511289985561289985661289985901020304050read count

chr6:133020691-133026746:-:L1HS:REF

chr6 133026542:133026726
methylatedunmethylatedunknownpositionproportionpatterns123413302654213302656613302657613302658113302658313302658713302659213302661013302664513302667513302668413302668713302669313302671013302672620406080read count

chr6:142128962-142128964:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456722386164731041391571621661681731832071020304050read count

chr6:147842450-147842452:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192021222322385561647310413915716216616817318320724681012read count

chr6:156034135-156040165:+:L1HS:REF

chr6 156034156:156034340
methylatedunmethylatedunknownpositionproportionpatterns12315603415615603417215603418915603419515603419815603420715603423715603427215603429015603429515603429915603430615603434020406080read count

chr6:156324980-156331010:-:L1HS:REF

chr6 156330805:156330990
methylatedunmethylatedunknownpositionproportionpatterns12315633080515633082915633083915633084415633084615633085015633085515633087315633090815633093915633095115633095715633097415633099020406080100120read count

chr6:157547703-157547705:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567223855616473104139157162166168173183207102030405060read count

chr7:7465092-7471120:+:L1HS:REF

chr7 7465092:7465297
methylatedunmethylatedunknownpositionproportionpatterns1234746509274651137465129746514674651527465155746516474651957465230746523374652487465253746525774652597465264746527474652972468101214read count

chr7:8351723-8353975:+:L1HS:REF

chr7 8351743:8351929
methylatedunmethylatedunknownpositionproportionpatterns1234567835174383517838351786835179583518268351861835187983518908351903835190583519228351929102030405060read count

chr7:12497211-12500000:+:L1HS:REF

chr7 12497232:12497417
methylatedunmethylatedunknownpositionproportionpatterns121249723212497248124972711249727412497283124973141249736512497372124973761249737812497393124974101249741750100150read count

chr7:25041860-25047891:-:L1HS:REF

chr7 25047686:25047871
methylatedunmethylatedunknownpositionproportionpatterns123425047686250477102504772025047725250477272504773125047736250477542504776825047789250478202504782925047832250478552504787110203040read count

chr7:30439242-30445274:+:L1HS:REF

chr7 30439263:30439448
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223242526273043926330439279304392963043930230439305304393143043934530439366304393803043939630439398304394033043940730439409304394143043942430439448246810read count

chr7:49680245-49686300:-:L1HS:REF

chr7 49686097:49686281
methylatedunmethylatedunknownpositionproportionpatterns12345678910114968609749686121496861314968613649686138496861424968614349686147496861654968620049686230496862394968624249686248496862654968628124681012read count

chr7:57539590-57540834:+:L1HS:REF

chr7 57539647:57539790
methylatedunmethylatedunknownpositionproportionpatterns15753964757539656575397455753974957539756575397835753979020406080read count

chr7:63148831-63154859:-:L1HS:REF

chr7 63154654:63154839
methylatedunmethylatedunknownpositionproportionpatterns123456315465463154678631546886315469363154695631546996315470463154706631547226315475763154788631547976315480063154806631548236315483920406080read count

chr7:66286853-66292884:-:L1HS:REF

chr7 66292679:66292864
methylatedunmethylatedunknownpositionproportionpatterns12345678662926796629270366292713662927186629272066292724662927296629274766292782662928136629282266292825662928316629284866292864123456read count

chr7:70197328-70203357:+:L1HS:REF

chr7 70197349:70197534
methylatedunmethylatedunknownpositionproportionpatterns12701973497019736570197382701973887019739170197400701974317019746670197484701974897019749370197495701975007019751070197534204060read count

chr7:91173443-91179517:+:L1HS:REF

chr7 91173463:91173624
methylatedunmethylatedunknownpositionproportionpatterns1234911734639117347991173505911735459117358091173603911736079117360991173614911736242468read count

chr7:93787624-93793679:-:L1HS:REF

chr7 93793474:93793659
methylatedunmethylatedunknownpositionproportionpatterns123456937934749379349893793508937935139379351993793524937935429379357793793608937936179379362093793626937936439379365920406080read count

chr7:97613656-97619688:+:L1HS:REF

chr7 97613677:97613862
methylatedunmethylatedunknownpositionproportionpatterns1239761367797613692976137109761371697613719976137289761375997613794976138129761381797613821976138239761382897613862102030405060read count

chr7:108188818-108188820:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234562238556164731041391571621661681731832072468read count

chr7:110707004-110713024:-:L1HS:REF

chr7 110712831:110713016
methylatedunmethylatedunknownpositionproportionpatterns1234567811071283111071286511071287011071287211071288111071289911071293411071296511071297411071298311071300011071301624681012read count

chr7:111243515-111249546:-:L1HS:REF

chr7 111249342:111249526
methylatedunmethylatedunknownpositionproportionpatterns123411124934211124936611124937611124938111124938311124938711124939211124941011124944511124947511124948411124948711124949311124951011124952620406080read count

chr7:111963193-111969223:+:L1HS:REF

chr7 111963214:111963399
methylatedunmethylatedunknownpositionproportionpatterns123411196321411196323011196324711196325311196325611196329611196333111196334911196335411196335811196336011196337511196339920406080100read count

chr7:125179570-125181978:-:L1HS:REF

chr7 125181774:125181959
methylatedunmethylatedunknownpositionproportionpatterns123456125181774125181798125181808125181813125181815125181819125181842125181877125181908125181920125181926125181943125181959204060read count

chr7:141062014-141068042:-:L1HS:REF

chr7 141067837:141068022
methylatedunmethylatedunknownpositionproportionpatterns12345678910111214106783714106786114106787114106787814106788214106788714106788914106790514106794014106797114106798014106798314106798914106802210203040read count

chr7:141920659-141926712:-:L1HS:REF

chr7 141926508:141926692
methylatedunmethylatedunknownpositionproportionpatterns12345678914192650814192653214192654214192654714192654914192655314192655814192657614192661114192664114192665014192665314192665914192667614192669251015202530read count

chr7:143121570-143121572:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234522385561647310413915716216616817318320710203040read count

chr7:147842591-147848623:-:L1HS:REF

chr7 147848418:147848603
methylatedunmethylatedunknownpositionproportionpatterns1234514784841814784844214784845214784845714784846314784846814784848614784852114784855214784856114784857014784858714784860320406080100120read count

chr7:150597094-150602628:+:L1HS:REF

chr7 150597154:150597197
methylatedunmethylatedunknownpositionproportionpatterns11505971541505971661505971975101520read count

chr8:8470859-8476906:+:L1HS:REF

chr8 8470880:8471065
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223242526272829303132333435363738398470880847089684709138470919847092284709318470962847101384710158471020847102484710268471031847104184710651.01.52.02.53.03.54.0read count

chr8:27113618-27119645:+:L1HS:REF

chr8 27113635:27113820
methylatedunmethylatedunknownpositionproportionpatterns1234527113635271136512711366827113674271136772711368627113717271137522711377027113775271137792711378127113786271137962711382020406080read count

chr8:71486984-71486986:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314223855616473104139157162166168173183207510152025read count

chr8:72875538-72881588:-:L1HS:REF

chr8 72881387:72881571
methylatedunmethylatedunknownpositionproportionpatterns123456787288138772881411728814217288142672881428728814327288143772881455728814907288152072881529728815327288153872881555728815715101520read count

chr8:75621331-75627355:-:L1HS:REF

chr8 75627151:75627336
methylatedunmethylatedunknownpositionproportionpatterns1234567756271517562718575627190756271927562719675627219756272387562725475627285756272947562729775627320756273361020304050read count

chr8:88685705-88691760:+:L1HS:REF

chr8 88685705:88685911
methylatedunmethylatedunknownpositionproportionpatterns12345678868570588685742886857598868576588685768886857778868580888685843886858618868587088685872886858778868588788685911510152025read count

chr8:91522091-91528121:-:L1HS:REF

chr8 91527919:91528087
methylatedunmethylatedunknownpositionproportionpatterns12345915279199152794391527953915279589152796091527964915279699152798791528022915280529152806191528064915280709152808710203040read count

chr8:104739851-104745873:-:L1HS:REF

chr8 104745668:104745853
methylatedunmethylatedunknownpositionproportionpatterns1234567891011104745668104745692104745707104745713104745718104745736104745771104745802104745811104745814104745820104745830104745837104745853123456read count

chr8:104959062-104964830:-:L1HS:REF

chr8 104964642:104964821
methylatedunmethylatedunknownpositionproportionpatterns123451049646421049646591049646691049646761049646801049647661049647821049648215101520read count

chr8:121329878-121334807:-:L1HS:REF

chr8 121334614:121334799
methylatedunmethylatedunknownpositionproportionpatterns1234512133461412133462112133463812133464812133466412133466612133468212133471712133474812133475712133476012133476612133478312133479920406080read count

chr8:127311575-127315431:+:L1HS:REF

chr8 127311575:127311739
methylatedunmethylatedunknownpositionproportionpatterns123412731157512731161112731162812731163412731163712731163912731166812731167712731173012731173512731173920406080read count

chr8:135875862-135881890:+:L1HS:REF

chr8 135875883:135876068
methylatedunmethylatedunknownpositionproportionpatterns1234135875883135875899135875922135875925135875934135875965135876000135876018135876023135876027135876029135876034135876044135876068204060read count

chr8:136438074-136444105:-:L1HS:REF

chr8 136443900:136444085
methylatedunmethylatedunknownpositionproportionpatterns1234567136443900136443924136443934136443939136443941136443945136443950136443968136444034136444043136444046136444052136444069136444085204060read count

chr9:20655632-20658802:-:L1HS:REF

chr9 20658600:20658784
methylatedunmethylatedunknownpositionproportionpatterns1220658600206586242065863420658639206586412065864520658668206587032065873320658745206587512065876820658784102030405060read count

chr9:28111895-28117865:-:L1HS:REF

chr9 28117732:28117835
methylatedunmethylatedunknownpositionproportionpatterns123456281177322811776628117771281177732811777728117782281178002811783551015202530read count

chr9:63913382-63916426:+:L1HS:REF

chr9 63913400:63913578
methylatedunmethylatedunknownpositionproportionpatterns123456786391340063913439639134426391351763913544639135781.01.52.02.53.03.54.0read count

chr9:83049539-83055571:-:L1HS:REF

chr9 83055366:83055551
methylatedunmethylatedunknownpositionproportionpatterns123456830553668305539083055400830554058305540783055411830554168305541883055434830554468305545383055469830555008305550983055512830555188305553583055551102030read count

chr9:90149604-90155634:+:L1HS:REF

chr9 90149624:90149809
methylatedunmethylatedunknownpositionproportionpatterns129014962490149640901496579014966390149666901496759014970690149741901497599014976490149770901497759014978590149809204060read count

chr9:94113535-94119565:-:L1HS:REF

chr9 94119361:94119546
methylatedunmethylatedunknownpositionproportionpatterns1234567891011941193619411938594119395941194009411940294119406941194119411942994119464941194959411950494119507941195139411953094119546102030405060read count

chr9:95697585-95703604:+:L1HS:REF

chr9 95697600:95697785
methylatedunmethylatedunknownpositionproportionpatterns12349569760095697616956976339569763995697642956976519569768295697717956977359569774095697746956977519569776195697785204060read count

chr9:99498741-99500000:+:L1HS:REF

chr9 99498761:99498946
methylatedunmethylatedunknownpositionproportionpatterns123456994987619949879499498800994988039949881299498843994988789949889499498896994989019949890599498907994989129949892299498946102030405060read count

chr9:103237485-103241471:+:L1HS:REF

chr9 103237538:103237690
methylatedunmethylatedunknownpositionproportionpatterns123410323753810323754710323755610323763810323764910323765110323765610323768410323769020406080read count

chr9:110417102-110423126:+:L1HS:REF

chr9 110417123:110417308
methylatedunmethylatedunknownpositionproportionpatterns123456781104171231104171391104171561104171621104171651104171741104172051104172331104172401104172581104172631104172671104172691104172741104172841104173081.01.52.02.53.03.54.0read count

chr9:110791097-110797129:+:L1HS:REF

chr9 110791118:110791303
methylatedunmethylatedunknownpositionproportionpatterns1234511079111811079113411079115111079115711079116011079116911079120011079123511079125311079125811079126211079126411079126911079127911079130320406080read count

chr9:112798107-112804159:-:L1HS:REF

chr9 112803958:112804142
methylatedunmethylatedunknownpositionproportionpatterns12345678910112803958112803982112803992112803997112803999112804003112804008112804026112804061112804091112804100112804103112804109112804126112804142510152025read count

chr10:5245354-5251383:+:L1HS:REF

chr10 5245374:5245559
methylatedunmethylatedunknownpositionproportionpatterns123455245374524539052454075245413524541652454255245456524549152455095245514524551852455205245525524553552455591.01.21.41.61.82.0read count

chr10:6369617-6375667:-:L1HS:REF

chr10 6375462:6375647
methylatedunmethylatedunknownpositionproportionpatterns12345663754626375486637549663755016375503637550763755126375530637556563755966375605637560863756146375631637564710203040read count

chr10:19088601-19094618:-:L1HS:REF

chr10 19094413:19094582
methylatedunmethylatedunknownpositionproportionpatterns12341909441319094437190944471909445219094454190944581909448119094516190945471909455619094559190945651909458220406080100120read count

chr10:25418756-25418758:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567822385561647310413915716216616817318320751015202530read count

chr10:33510845-33516876:-:L1HS:REF

chr10 33516672:33516857
methylatedunmethylatedunknownpositionproportionpatterns1234567833516672335166963351670633516711335167133351671733516722335167403351677533516806335168153351681833516824335168413351685710203040read count

chr10:37995443-38000000:+:L1HS:REF

chr10 37995478:37995634
methylatedunmethylatedunknownpositionproportionpatterns123456789103799547837995495379955013799550437995513379955443799557937995595379956003799563412345read count

chr10:67189566-67189568:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234223855616473104139157162166168173183207102030read count

chr10:85355506-85361538:+:L1HS:REF

chr10 85355527:85355712
methylatedunmethylatedunknownpositionproportionpatterns1238535552785355543853555608535556685355569853555788535560985355644853556628535566785355671853556788535568885355712204060read count

chr10:98782941-98788971:-:L1HS:REF

chr10 98788766:98788951
methylatedunmethylatedunknownpositionproportionpatterns12349878876698788790987888009878880598788811987888169878886998788900987889099878891298788918987889359878895120406080read count

chr10:105377346-105383377:-:L1HS:REF

chr10 105383173:105383357
methylatedunmethylatedunknownpositionproportionpatterns12341053831731053831971053832071053832121053832141053832181053832231053832411053833061053833151053833181053833241053833411053833571020304050read count

chr10:105775520-105781551:-:L1HS:REF

chr10 105781346:105781531
methylatedunmethylatedunknownpositionproportionpatterns1234105781346105781370105781380105781387105781391105781414105781449105781480105781489105781492105781498105781515105781531204060read count

chr10:108310130-108316139:-:L1HS:REF

chr10 108315955:108316124
methylatedunmethylatedunknownpositionproportionpatterns1234567891083159551083159791083159891083159941083159961083160001083160071083160231083160581083160981083161011083161071083161241020304050read count

chr11:5914493-5918448:+:L1HS:REF

chr11 5914502:5914688
methylatedunmethylatedunknownpositionproportionpatterns1234567591450259145355914584591463859146435914647591468810203040read count

chr11:24327951-24334001:+:L1HS:REF

chr11 24327971:24328155
methylatedunmethylatedunknownpositionproportionpatterns123243279712432798724328004243280102432801324328022243280522432808724328105243281102432811424328116243281212432813124328155102030405060read count

chr11:25500009-25502139:-:L1HS:REF

chr11 25501955:25502103
methylatedunmethylatedunknownpositionproportionpatterns12342550195525501958255019682550197325501975255019792550198625502002255020372550206825502086255021032468read count

chr11:31315654-31321680:-:L1HS:REF

chr11 31321476:31321661
methylatedunmethylatedunknownpositionproportionpatterns12345313214763132150031321510313215153132151731321521313215443132157931321610313216193132162231321628313216453132166120406080read count

chr11:36551606-36557636:-:L1HS:REF

chr11 36557432:36557617
methylatedunmethylatedunknownpositionproportionpatterns123655743236557456365574663655747136557473365574773655748236557484365575003655753536557566365575753655757836557584365576013655761720406080read count

chr11:48847694-48853724:-:L1HS:REF

chr11 48853519:48853704
methylatedunmethylatedunknownpositionproportionpatterns123454885351948853553488535584885356448853569488536224885365348853671488536884885370420406080read count

chr11:54849946-54851079:+:L1HS:REF

chr11 54849960:54850145
methylatedunmethylatedunknownpositionproportionpatterns12548499605484999354849999548500025485004254850077548501005485010454850111548501215485014520406080read count

chr11:58000000-58000187:-:L1HS:REF

chr11 58000023:58000167
methylatedunmethylatedunknownpositionproportionpatterns1235800002358000027580000505800008558000125580001285800013458000167204060read count

chr11:78677772-78683802:-:L1HS:REF

chr11 78683599:78683784
methylatedunmethylatedunknownpositionproportionpatterns12345786835997868362378683633786836387868364078683644786836497868365178683667786837027868374278683745786837517868376878683784102030405060read count

chr11:82155865-82161891:+:L1HS:REF

chr11 82155865:82156064
methylatedunmethylatedunknownpositionproportionpatterns1234582155865821558798215589582155912821559188215592182155930821559618215599682156014821560198215602382156025821560308215604082156064102030405060read count

chr11:85324758-85330821:+:L1HS:REF

chr11 85324779:85324964
methylatedunmethylatedunknownpositionproportionpatterns1285324779853247958532481285324818853248218532483085324861853248968532491485324919853249238532492585324930853249408532496420406080100read count

chr11:87340031-87346061:-:L1HS:REF

chr11 87345856:87346041
methylatedunmethylatedunknownpositionproportionpatterns128734585687345880873458908734589587345897873459018734590687345924873459598734599087345999873460028734600887346025873460411.01.52.02.53.03.54.0read count

chr11:90400067-90406098:-:L1HS:REF

chr11 90405894:90406079
methylatedunmethylatedunknownpositionproportionpatterns12345690405894904059189040592890405935904059399040594490405962904059979040602890406037904060409040604690406063904060791020304050read count

chr11:90966271-90972302:-:L1HS:REF

chr11 90972097:90972282
methylatedunmethylatedunknownpositionproportionpatterns12390972097909721219097213190972136909721389097214290972165909722009097223190972240909722439097224990972282102030read count

chr11:93420986-93427031:+:L1HS:REF

chr11 93420993:93421177
methylatedunmethylatedunknownpositionproportionpatterns12345678934209939342100993421026934210329342103593421044934210749342110993421127934211329342113693421138934211439342115393421177510152025read count

chr11:95436216-95442246:+:L1HS:REF

chr11 95436236:95436420
methylatedunmethylatedunknownpositionproportionpatterns12345679543623695436252954362699543627595436278954362879543631795436352954363709543637595436379954363819543638695436396954364201020304050read count

chr11:108685166-108685556:-:L1HS:REF

chr11 108685353:108685538
methylatedunmethylatedunknownpositionproportionpatterns123456710868535310868537710868538710868539210868539410868539810868540310868542110868545610868548710868549610868550510868552210868553820406080100read count

chr11:109177494-109183526:-:L1HS:REF

chr11 109183321:109183506
methylatedunmethylatedunknownpositionproportionpatterns12310918332110918334510918335510918336010918336210918337110918338910918339610918342410918345510918346410918346710918347310918350610203040read count

chr11:115024803-115024805:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011122238556164731041391571621661681731832075101520read count

chr11:125536609-125542640:+:L1HS:REF

chr11 125536628:125536813
methylatedunmethylatedunknownpositionproportionpatterns123456781255366281255366441255366611255366671255366701255366791255367101255367451255367611255367681255367721255367791255367891255368131020304050read count

chr12:3500000-3505228:-:L1HS:REF

chr12 3505023:3505208
methylatedunmethylatedunknownpositionproportionpatterns12343505023350504735050573505062350506435050683505073350509135051263505157350516635051753505192350520810203040read count

chr12:33172858-33172860:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567891011121314151617181920212223242526272829223855616473104139157162166168173183207246810read count

chr12:33864388-33864390:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns122238556164731041391571621661681731832071.01.52.02.53.0read count

chr12:38799646-38805673:+:L1HS:REF

chr12 38799664:38799849
methylatedunmethylatedunknownpositionproportionpatterns12345678938799664387996803879969738799703387997063879971538799746387997813879979738799799387998043879980838799810387998153879982538799849204060read count

chr12:44108220-44114234:-:L1HS:REF

chr12 44114029:44114214
methylatedunmethylatedunknownpositionproportionpatterns123456789441140294411405344114063441140684411407044114074441140794411409744114132441141634411417244114175441141814411419844114214204060read count

chr12:51562631-51568657:-:L1HS:REF

chr12 51568456:51568637
methylatedunmethylatedunknownpositionproportionpatterns12345515684565156847651568486515684915156849351568497515685025156852051568555515685865156859551568598515686045156862151568637204060read count

chr12:54788573-54794627:+:L1HS:REF

chr12 54788573:54788776
methylatedunmethylatedunknownpositionproportionpatterns1235478857354788591547886075478862454788630547886335478864254788673547887085478872654788731547887355478873754788742547887525478877610203040read count

chr12:55096256-55102283:-:L1HS:REF

chr12 55102078:55102263
methylatedunmethylatedunknownpositionproportionpatterns12345551020785510210255102117551021195510212355102146551021815510221255102221551022245510223055102247551022631020304050read count

chr12:69773410-69779441:-:L1HS:REF

chr12 69779236:69779421
methylatedunmethylatedunknownpositionproportionpatterns1234566977923669779260697792706977927569779277697792816977928669779304697793396977937069779379697793826977938869779405697794215101520read count

chr12:73283667-73289668:-:L1HS:REF

chr12 73289487:73289648
methylatedunmethylatedunknownpositionproportionpatterns1234573289487732894977328950273289504732895137328953173289566732895977328960673289609732896327328964820406080100read count

chr12:74874868-74880901:+:L1HS:REF

chr12 74874889:74875074
methylatedunmethylatedunknownpositionproportionpatterns1234748748897487492274874928748749317487494074874971748750067487502474875029748750337487503574875040748750507487507450100150read count

chr12:101146043-101152064:+:L1HS:REF

chr12 101146043:101146249
methylatedunmethylatedunknownpositionproportionpatterns121011460431011460801011460971011461031011461061011461461011461811011461831011461971011462081011462151011462251011462495101520read count

chr12:108996947-109000000:+:L1HS:REF

chr12 108996968:108997153
methylatedunmethylatedunknownpositionproportionpatterns1234510899696810899698410899700110899700710899701910899705010899708510899710110899710810899711210899711410899711910899712910899715310203040read count

chr12:126299023-126305038:-:L1HS:REF

chr12 126304837:126305021
methylatedunmethylatedunknownpositionproportionpatterns12345671263048371263048611263048711263048761263048781263048821263048871263049051263049401263049701263049791263049821263049881263050051263050211020304050read count

chr13:19496786-19500000:+:L1HS:REF

chr13 19496786:19496967
methylatedunmethylatedunknownpositionproportionpatterns12345671949678619496807194968231949684019496846194968491949685119496923194969391949694119496946194969501949695219496957194969675101520read count

chr13:31302314-31308370:+:L1HS:REF

chr13 31302314:31302519
methylatedunmethylatedunknownpositionproportionpatterns12345678313023143130233431302350313023673130237331302376313023853130241631302451313024693130247431302478313024803130248531302495313025191.01.52.02.53.0read count

chr13:34480262-34486294:-:L1HS:REF

chr13 34486089:34486274
methylatedunmethylatedunknownpositionproportionpatterns1234344860893448611334486128344861303448613434486139344861573448619234486223344862323448623534486241344862583448627420406080read count

chr13:48465555-48471566:+:L1HS:REF

chr13 48465565:48465750
methylatedunmethylatedunknownpositionproportionpatterns123456789101148465565484655814846559848465604484656074846561648465647484656824846570048465705484657114846571648465726484657501020304050read count

chr13:54572234-54573121:+:L1HS:REF

chr13 54572254:54572443
methylatedunmethylatedunknownpositionproportionpatterns1234554572254545722705457228754572293545722965457230554572336545723715457237554572391545724025457240454572419545724431.01.52.02.53.03.54.0read count

chr13:60888200-60888202:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234562238616473104139157162166168173183207102030read count

chr13:74426326-74432354:+:L1HS:REF

chr13 74426341:74426526
methylatedunmethylatedunknownpositionproportionpatterns123456789101112137442634174426357744263747442638074426383744264237442645874426466744264767442648174426485744264877442649274426502744265265101520read count

chr13:76612823-76618851:-:L1HS:REF

chr13 76618646:76618831
methylatedunmethylatedunknownpositionproportionpatterns123457661864676618670766186857661868776618691766186967661871476618749766187807661878976618792766187987661881476618831204060read count

chr13:92685561-92691592:-:L1HS:REF

chr13 92691387:92691572
methylatedunmethylatedunknownpositionproportionpatterns123492691387926914119269142192691426926914289269143292691437926914559269149092691521926915309269153392691539926915569269157250100150200read count

chr13:97667408-97673440:-:L1HS:REF

chr13 97673235:97673420
methylatedunmethylatedunknownpositionproportionpatterns1234569767323597673259976732699767327497673276976732809767328597673287976733039767333897673369976733789767338197673387976734201020304050read count

chr13:105382665-105383251:-:L1HS:REF

chr13 105383056:105383234
methylatedunmethylatedunknownpositionproportionpatterns12310538305610538307310538308310538308810538309010538311710538315210538319210538319510538320110538323410203040read count

chr13:108510472-108516495:-:L1HS:REF

chr13 108516297:108516482
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192021222324252627282930311085162971085163211085163311085163361085163381085163421085163471085163491085163651085164311085164401085164431085164491085164661085164822468read count

chr14:30684809-30690837:-:L1HS:REF

chr14 30690632:30690834
methylatedunmethylatedunknownpositionproportionpatterns1234306906323069065630690666306906713069067330690677306906823069070030690714306907353069076630690775306907783069078430690801306908173069083420406080read count

chr14:44705080-44711104:-:L1HS:REF

chr14 44710899:44711084
methylatedunmethylatedunknownpositionproportionpatterns123447108994471093344710938447109404471094444710949447109514471096744711002447110324471104244711045447110684471108410203040read count

chr14:45477110-45483169:-:L1HS:REF

chr14 45482988:45483149
methylatedunmethylatedunknownpositionproportionpatterns12345482988454829984548300345483009454830144548303245483067454831074548311045483116454831334548314920406080100read count

chr14:46727484-46727758:-:L1HS:REF

chr14 46727554:46727739
methylatedunmethylatedunknownpositionproportionpatterns123446727554467275784672758846727593467275954672759946727604467276224672765746727688467276974672770046727706467277234672773920406080100read count

chr14:48187082-48193113:+:L1HS:REF

chr14 48187103:48187288
methylatedunmethylatedunknownpositionproportionpatterns1234567481871034818711948187136481871424818714548187154481871854818722048187238481872434818724748187254481872644818728820406080read count

chr14:51794601-51800632:-:L1HS:REF

chr14 51800428:51800613
methylatedunmethylatedunknownpositionproportionpatterns123455180042851800452518004625180046751800469518004735180047851800496518005625180057151800574518005805180059751800613102030405060read count

chr14:52201038-52201040:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns12345622385561647310413915716216616817318320751015202530read count

chr14:61055116-61061148:-:L1HS:REF

chr14 61060943:61061128
methylatedunmethylatedunknownpositionproportionpatterns123456789610609436106096761060977610609826106098461060988610609936106099561061011610610466106107761061086610610896106109561061112610611281020304050read count

chr14:62535851-62541882:+:L1HS:REF

chr14 62535870:62536055
methylatedunmethylatedunknownpositionproportionpatterns12345625358706253588662535903625359096253591262535921625359526253598762536005625360106253601462536016625360216253603162536055102030405060read count

chr14:63116706-63122735:-:L1HS:REF

chr14 63122530:63122715
methylatedunmethylatedunknownpositionproportionpatterns123456763122530631225546312256463122569631225716312257563122580631225986312263363122664631226736312267663122682631226996312271520406080read count

chr14:70547290-70553322:+:L1HS:REF

chr14 70547311:70547496
methylatedunmethylatedunknownpositionproportionpatterns123456789107054731170547327705473447054735070547353705473627054739370547428705474467054745170547455705474577054746270547472705474961.01.52.02.53.03.54.0read count

chr14:79314060-79314943:+:L1HS:REF

chr14 79314072:79314257
methylatedunmethylatedunknownpositionproportionpatterns12345679314072793140887931410579314111793141147931412379314154793141897931420579314207793142127931421679314218793142237931423379314257510152025read count

chr15:47215130-47215132:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123422385561647310413915716216616817318320710203040read count

chr15:51417216-51423246:-:L1HS:REF

chr15 51423042:51423227
methylatedunmethylatedunknownpositionproportionpatterns123455142304251423066514230765142308151423083514230875142309251423110514231455142317651423185514231885142319451423211514232271020304050read count

chr15:54926081-54932099:-:L1HS:REF

chr15 54931895:54932080
methylatedunmethylatedunknownpositionproportionpatterns1234567895493189554931919549319295493193454931936549319405493194554931963549319985493202954932038549320415493204754932064549320801.01.52.02.53.0read count

chr15:83450804-83456834:-:L1HS:REF

chr15 83456630:83456815
methylatedunmethylatedunknownpositionproportionpatterns12345834566308345665483456664834566698345667183456675834566808345669883456733834567648345677383456776834567828345679983456815204060read count

chr15:87509891-87515920:+:L1HS:REF

chr15 87509909:87510094
methylatedunmethylatedunknownpositionproportionpatterns123487509909875099258750994287509948875099518750996087509991875100268751004487510049875100538751005587510060875100708751009451015202530read count

chr16:9584490-9590522:-:L1HS:REF

chr16 9590317:9590502
methylatedunmethylatedunknownpositionproportionpatterns19590317959034195903519590356959035895903629590367959038595904209590451959046095904639590469959048695905022468101214read count

chr16:32587481-32588397:-:L1HS:REF

chr16 32588216:32588377
methylatedunmethylatedunknownpositionproportionpatterns12325882163258822632588242325883263258833832588344325883613258837720406080100120read count

chr16:33952564-33958612:-:L1HS:REF

chr16 33958408:33958592
methylatedunmethylatedunknownpositionproportionpatterns1234567339584083395843233958442339584473395844933958453339584583395847633958511339585413395855033958553339585593395857633958592510152025read count

chr16:34118474-34119193:+:L1HS:REF

chr16 34118489:34118635
methylatedunmethylatedunknownpositionproportionpatterns123411848934118540341186355101520read count

chr16:35608475-35614501:-:L1HS:REF

chr16 35614302:35614471
methylatedunmethylatedunknownpositionproportionpatterns1234563561430235614326356143413561434735614352356143703561440635614445356144483561445435614471102030405060read count

chr16:54042096-54048145:+:L1HS:REF

chr16 54042114:54042299
methylatedunmethylatedunknownpositionproportionpatterns12345678910111213141554042114540421305404214754042156540421655404219654042231540422495404225454042258540422605404226554042275540422991234567read count

chr16:65690011-65696020:+:L1HS:REF

chr16 65690019:65690170
methylatedunmethylatedunknownpositionproportionpatterns12345656900196569003565690052656900586569006165690070656901016569015465690159656901636569017010203040read count

chr16:68583448-68589505:-:L1HS:REF

chr16 68589300:68589485
methylatedunmethylatedunknownpositionproportionpatterns12345676858930068589324685893346858933968589341685893456858935068589368685894036858943468589443685894526858946968589485102030read count

chr16:80727089-80730717:+:L1HS:REF

chr16 80727137:80727289
methylatedunmethylatedunknownpositionproportionpatterns12348072713780727146807271558072718680727239807272448072725080727265807272828072728920406080100120read count

chr16:83637252-83643296:+:L1HS:REF

chr16 83637252:83637470
methylatedunmethylatedunknownpositionproportionpatterns123458363725283637271836372878363730483637310836373288363733783637367836374028363742083637425836374298363743183637436836374468363747010203040read count

chr17:9615985-9622015:+:L1HS:REF

chr17 9616006:9616191
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192021222324961600696160229616039961604596160489616057961608896161239616139961614196161469616150961615296161579616167961619151015read count

chr17:66596579-66602595:-:L1HS:REF

chr17 66602390:66602575
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415166660239066602414666024246660242966602431666024356660244066602458666024936660252466602533666025366660254266602559666025755101520read count

chr17:66641175-66641177:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234522385561647310413915716216616817318320751015read count

chr17:69000000-69005148:-:L1HS:REF

chr17 69004943:69005142
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415166900494369004950690049676900497769004982690049936900499569005011690050466900507769005086690050896900511269005128690051421234567read count

chr17:70458956-70464987:+:L1HS:REF

chr17 70458977:70459161
methylatedunmethylatedunknownpositionproportionpatterns1234567891070458977704589937045901070459016704590197045902870459058704590937045911170459116704591207045912270459127704591377045916151015202530read count

chr18:535701-541755:+:L1HS:REF

chr18 535721:535905
methylatedunmethylatedunknownpositionproportionpatterns1234567891053572153573753575453576053576353577253580153580353583753585353585553586053586653587153588153589853590551015202530read count

chr18:4477329-4478177:+:L1HS:REF

chr18 4477348:4477533
methylatedunmethylatedunknownpositionproportionpatterns123447734844773644477381447738744773904477399447743044774514477481447748344774884477492447749444774994477509447753310203040read count

chr18:5684668-5687891:+:L1HS:REF

chr18 5684688:5684873
methylatedunmethylatedunknownpositionproportionpatterns125684688568470456847215684727568473056847395684770568480556848215684828568483256848395684849568487320406080read count

chr18:13975860-13981891:-:L1HS:REF

chr18 13981686:13981871
methylatedunmethylatedunknownpositionproportionpatterns1231398168613981710139817201398172513981727139817311398173613981738139817541398178913981820139818291398183213981838139818551398187120406080read count

chr18:37819737-37825798:+:L1HS:REF

chr18 37819758:37819943
methylatedunmethylatedunknownpositionproportionpatterns123378197583781977437819791378197973781980037819840378198753781989337819898378199023781990437819909378199193781994350100150read count

chr18:41775014-41781045:+:L1HS:REF

chr18 41775035:41775220
methylatedunmethylatedunknownpositionproportionpatterns123417750354177505241775068417750744177507741775086417751174177515241775170417751794177518141775186417751964177522020406080100read count

chr18:44021279-44024826:-:L1HS:REF

chr18 44024621:44024806
methylatedunmethylatedunknownpositionproportionpatterns1244024621440246284402466244024671440246894402472444024755440247674402480620406080100read count

chr18:47660373-47666427:+:L1HS:REF

chr18 47660391:47660576
methylatedunmethylatedunknownpositionproportionpatterns123456747660391476604074766042447660430476604334766044247660473476605084766052647660531476605354766053747660542476605524766057651015read count

chr18:50343959-50349987:-:L1HS:REF

chr18 50349808:50349969
methylatedunmethylatedunknownpositionproportionpatterns123450349808503498185034982350349825503498295034985250349887503499275034993050349936503499535034996924681012read count

chr18:62906292-62912314:+:L1HS:REF

chr18 62906313:62906498
methylatedunmethylatedunknownpositionproportionpatterns12345678962906313629063296290634662906352629063556290636462906395629064306290645762906459629064646290647462906498102030405060read count

chr18:67603633-67605600:+:L1HS:REF

chr18 67603633:67603837
methylatedunmethylatedunknownpositionproportionpatterns12345676036336760365367603669676036866760369267603703676037346760376967603785676037926760383751015202530read count

chr18:70746549-70752581:-:L1HS:REF

chr18 70752376:70752561
methylatedunmethylatedunknownpositionproportionpatterns1234707523767075240070752410707524177075242170752426707524447075247970752510707525197075252270752528707525457075256110203040read count

chr18:72966526-72972556:-:L1HS:REF

chr18 72972351:72972536
methylatedunmethylatedunknownpositionproportionpatterns1234729723517297237572972385729723907297239272972396729724017297240372972419729724547297248572972497729725037297253610203040read count

chr18:75846851-75852883:+:L1HS:REF

chr18 75846872:75847057
methylatedunmethylatedunknownpositionproportionpatterns12345675846872758468887584690575846911758469147584692375846954758469897584700775847012758470167584701875847023758470337584705751015202530read count

chr19:43864494-43867300:-:L1HS:REF

chr19 43867132:43867292
methylatedunmethylatedunknownpositionproportionpatterns12345438671324386714943867153438671584386716043867176438672114386724143867250438672534386725943867268438672764386729220406080read count

chr20:11632779-11638837:+:L1HS:REF

chr20 11632796:11632981
methylatedunmethylatedunknownpositionproportionpatterns123116327961163281211632829116328351163283811632847116328781163291311632931116329361163294011632942116329471163295711632981102030405060read count

chr20:12801017-12807044:-:L1HS:REF

chr20 12806842:12807027
methylatedunmethylatedunknownpositionproportionpatterns1234512806842128068661280687612806881128068831280688712806892128069101280694512806976128069851280698812806994128070111280702710203040read count

chr20:23426108-23432140:+:L1HS:REF

chr20 23426128:23426289
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192023426128234261442342616123426167234261702342617923426210234262452342626323426268234262722342627423426279234262891.01.52.02.53.03.54.0read count

chr20:39977475-39977785:+:L1HS:REF

chr20 39977506:39977674
methylatedunmethylatedunknownpositionproportionpatterns12399775063997752339977529399775323997754139977606399776243997763339977635399776403997767420406080100120read count

chr21:22253869-22253871:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234567223855616473104139157162166168173183207510152025read count

chr22:15214621-15220667:-:L1HS:REF

chr22 15220462:15220647
methylatedunmethylatedunknownpositionproportionpatterns1234567815220462152204861522050115220503152205071522051215220530152205651522059615220605152206081522061415220631152206472468read count

chr22:22131969-22131971:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456789101112131415161718192021222324252627282930313233343536373839404142223855616473104139157162166168173183207123456read count

chr22:22361255-22361257:+:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns1234223855616473104139157162166168173183207204060read count

chr22:28059912-28059914:-:L1HS:NONREF

L1HS 22:207
methylatedunmethylatedunknownpositionproportionpatterns123456223855616473104139157162166168173183207510152025read count

chr22:28663283-28669315:+:L1HS:REF

chr22 28663304:28663489
methylatedunmethylatedunknownpositionproportionpatterns12342866330428663320286633372866334328663355286633862866342128663439286634442866344828663450286634552866346528663489204060read count

chr22:34549683-34555708:-:L1HS:REF

chr22 34555503:34555689
methylatedunmethylatedunknownpositionproportionpatterns1234567891034555503345555273455554234555544345555483455555534555571345556063455562434555637345556473455565034555656345556895101520read count

chr22:48985761-48991792:-:L1HS:REF

chr22 48991587:48991772
methylatedunmethylatedunknownpositionproportionpatterns12345648991587489916114899162148991626489916284899163248991637489916554899172148991730489917334899173948991756489917721.01.52.02.53.0read count

chrX:23238516-23244575:+:L1HS:REF

chrX 23238516:23238722
methylatedunmethylatedunknownpositionproportionpatterns12345678232385162323853723238553232385702323857623238579232385882323861923238670232386722323867723238681232386832323868823238698232387225101520read count

chrX:26314417-26320446:-:L1HS:REF

chrX 26320243:26320428
methylatedunmethylatedunknownpositionproportionpatterns12342632024326320267263202772632028226320284263202932632031126320346263203772632038626320389263203952632041226320428102030405060read count

chrX:50019456-50025505:-:L1HS:REF

chrX 50025300:50025485
methylatedunmethylatedunknownpositionproportionpatterns123456500253005002532450025334500253395002534150025345500253505002535250025368500254035002543450025443500254465002545250025469500254855101520read count

chrX:54118685-54124744:-:L1HS:REF

chrX 54124564:54124725
methylatedunmethylatedunknownpositionproportionpatterns123456789101154124564541245745412457954124581541245855412459054124608541246435412467454124683541246865412469254124709541247251.01.21.41.61.82.0read count

chrX:56695884-56701916:+:L1HS:REF

chrX 56695905:56696090
methylatedunmethylatedunknownpositionproportionpatterns1234565669590556695921566959385669594456695947566959565669598756696022566960405669604556696049566960565669606656696090102030405060read count

chrX:64013267-64019286:-:L1HS:REF

chrX 64019081:64019266
methylatedunmethylatedunknownpositionproportionpatterns1234566401908164019105640191156401912064019122640191266401913164019149640191846401921564019224640192276401923364019250640192661020304050read count

chrX:73106142-73112170:+:L1HS:REF

chrX 73106163:73106348
methylatedunmethylatedunknownpositionproportionpatterns123456789731061637310619673106202731062057310621473106245731062807310629873106303731063077310630973106314731063247310634810203040read count

chrX:73380991-73387013:+:L1HS:REF

chrX 73381003:73381188
methylatedunmethylatedunknownpositionproportionpatterns12345678910117338100373381019733810367338104273381045733810857338112073381138733811437338114773381149733811547338118851015202530read count

chrX:76233354-76239154:+:L1HS:REF

chrX 76233368:76233524
methylatedunmethylatedunknownpositionproportionpatterns12347623336876233384762334017623341076233490762334947623352451015read count

chrX:76322775-76328806:-:L1HS:REF

chrX 76328614:76328799
methylatedunmethylatedunknownpositionproportionpatterns123456763286147632863876328648763286537632865576328659763286647632868276328717763287487632875776328760763287667632878376328799102030read count

chrX:80905077-80905430:-:L1HS:REF

chrX 80905251:80905396
methylatedunmethylatedunknownpositionproportionpatterns123456788090525180905266809052778090529580905330809053618090537080905373809053965101520read count

chrX:81841153-81847184:+:L1HS:REF

chrX 81841174:81841358
methylatedunmethylatedunknownpositionproportionpatterns1234818411748184120781841213818412168184122581841255818412908184130881841317818413198184132481841334818413581020304050read count

chrX:83059584-83065637:-:L1HS:REF

chrX 83065432:83065617
methylatedunmethylatedunknownpositionproportionpatterns123456789830654328306545683065466830654718306547383065477830654828306550083065535830655668306557583065578830655848306560183065617102030read count

chrX:83542396-83548420:+:L1HS:REF

chrX 83542415:83542600
methylatedunmethylatedunknownpositionproportionpatterns123458354241583542431835424488354245483542457835424668354249783542532835425508354255583542559835425618354256683542576835425848354260010203040read count

chrX:83838051-83839860:-:L1HS:REF

chrX 83839657:83839842
methylatedunmethylatedunknownpositionproportionpatterns1234568383965783839664838396818383969183839698838397028383970983839725838397608383980083839803838398421020304050read count

chrX:85733685-85734499:+:L1HS:REF

chrX 85733764:85733807
methylatedunmethylatedunknownpositionproportionpatterns1285733764857337758573380751015202530read count

chrX:87821407-87827419:+:L1HS:REF

chrX 87821428:87821613
methylatedunmethylatedunknownpositionproportionpatterns12345687821428878214448782146187821467878214708782147987821510878215458782156387821568878215728782157487821579878215898782161310203040read count

chrX:92254241-92256469:-:L1HS:REF

chrX 92256271:92256449
methylatedunmethylatedunknownpositionproportionpatterns123459225627192256303922563059225630992256367922564109225643392256449102030405060read count

chrX:96057824-96063842:-:L1HS:REF

chrX 96063638:96063823
methylatedunmethylatedunknownpositionproportionpatterns123456789101112960636389606366296063672960636799606368396063688960637069606374196063781960637849606379096063807960638235101520read count

chrX:106469285-106475319:+:L1HS:REF

chrX 106469305:106469490
methylatedunmethylatedunknownpositionproportionpatterns1234567891010646930510646932110646933810646934410646934710646935610646938710646942210646944010646944510646944910646945110646945610646946610646949010203040read count

chrX:119435468-119441493:-:L1HS:REF

chrX 119441291:119441475
methylatedunmethylatedunknownpositionproportionpatterns12119441291119441315119441325119441330119441332119441336119441341119441359119441394119441424119441433119441436119441442119441459119441475204060read count

chrX:127362223-127368248:+:L1HS:REF

chrX 127362243:127362428
methylatedunmethylatedunknownpositionproportionpatterns12345678127362243127362259127362276127362282127362285127362325127362360127362378127362387127362389127362394127362404127362428102030405060read count

chrX:130517377-130523407:+:L1HS:REF

chrX 130517396:130517581
methylatedunmethylatedunknownpositionproportionpatterns121305173961305174121305174291305174351305174381305174471305174781305175131305175311305175401305175421305175471305175571305175812468101214read count

chrX:141421202-141427246:-:L1HS:REF

chrX 141427042:141427226
methylatedunmethylatedunknownpositionproportionpatterns12345678910111414270421414270661414270761414270811414270831414270871414270921414271101414271451414271751414271841414271871414271931414272101414272265101520read count

chrX:142477849-142483853:+:L1HS:REF

chrX 142477865:142478050
methylatedunmethylatedunknownpositionproportionpatterns1231424778651424778811424778981424779041424779071424779161424779821424780001424780051424780091424780111424780161424780261424780501020304050read count

chrX:147653734-147659767:+:L1HS:REF

chrX 147653734:147653940
methylatedunmethylatedunknownpositionproportionpatterns123456147653734147653755147653771147653788147653794147653797147653806147653837147653872147653890147653895147653899147653906147653916147653940102030read count

chrX:149178166-149184185:-:L1HS:REF

chrX 149183992:149184177
methylatedunmethylatedunknownpositionproportionpatterns123149183992149184026149184031149184033149184037149184042149184060149184095149184126149184138149184144149184161149184177102030405060read count

chrX:151330320-151336351:+:L1HS:REF

chrX 151330341:151330525
methylatedunmethylatedunknownpositionproportionpatterns123451513303411513303571513303741513303831513303921513304231513304581513304741513304811513304851513304871513304911513305011513305251020304050read count

chrX:155516016-155522048:-:L1HS:REF

chrX 155521843:155522028
methylatedunmethylatedunknownpositionproportionpatterns1234515552184315552186715552187715552188215552188415552188815552189315552191115552194615552197715552198615552198915552199515552201215552202820406080read count

Visualisation settings

Methylation patterns

Histogram

Colour

Amplicon order

Drag the amplicon names up or down to reorder their display.

  • ↕ chr1:34566055-34572105:-:L1HS:REF
  • ↕ chr1:67078891-67084915:-:L1HS:REF
  • ↕ chr1:68736693-68740136:-:L1HS:REF
  • ↕ chr1:77000000-77005515:-:L1HS:REF
  • ↕ chr1:84052389-84058406:-:L1HS:REF
  • ↕ chr1:85748519-85754548:+:L1HS:REF
  • ↕ chr1:85927067-85933100:+:L1HS:REF
  • ↕ chr1:86679080-86685111:-:L1HS:REF
  • ↕ chr1:104770247-104776278:-:L1HS:REF
  • ↕ chr1:104843833-104849864:-:L1HS:REF
  • ↕ chr1:113497220-113500000:+:L1HS:REF
  • ↕ chr1:118852351-118858380:+:L1HS:REF
  • ↕ chr1:121532230-121538261:-:L1HS:REF
  • ↕ chr1:146717192-146723218:-:L1HS:REF
  • ↕ chr1:166243053-166249084:-:L1HS:REF
  • ↕ chr1:174590323-174596379:-:L1HS:REF
  • ↕ chr1:179606225-179606227:-:L1HS:NONREF
  • ↕ chr1:180866811-180872843:-:L1HS:REF
  • ↕ chr1:184845616-184851641:+:L1HS:REF
  • ↕ chr1:187343764-187349794:-:L1HS:REF
  • ↕ chr1:187597671-187603699:+:L1HS:REF
  • ↕ chr1:193717837-193723892:-:L1HS:REF
  • ↕ chr1:196219370-196225402:-:L1HS:REF
  • ↕ chr1:197707714-197713746:+:L1HS:REF
  • ↕ chr1:197802331-197803141:+:L1HS:REF
  • ↕ chr1:209913771-209919823:-:L1HS:REF
  • ↕ chr1:216485645-216487614:+:L1HS:REF
  • ↕ chr1:220245155-220246008:+:L1HS:REF
  • ↕ chr1:237019467-237025494:-:L1HS:REF
  • ↕ chr1:237075264-237081293:+:L1HS:REF
  • ↕ chr1:239623498-239629523:-:L1HS:REF
  • ↕ chr2:11000000-11002136:-:L1HS:REF
  • ↕ chr2:16593725-16599758:-:L1HS:REF
  • ↕ chr2:22968126-22968128:-:L1HS:NONREF
  • ↕ chr2:36112506-36118537:-:L1HS:REF
  • ↕ chr2:71411474-71417501:-:L1HS:REF
  • ↕ chr2:81870918-81870920:+:L1HS:NONREF
  • ↕ chr2:86655238-86661268:-:L1HS:REF
  • ↕ chr2:102295989-102295991:+:L1HS:NONREF
  • ↕ chr2:102566355-102572385:-:L1HS:REF
  • ↕ chr2:112503812-112509845:-:L1HS:REF
  • ↕ chr2:126178048-126184064:-:L1HS:REF
  • ↕ chr2:129415687-129417400:-:L1HS:REF
  • ↕ chr2:129685897-129687022:-:L1HS:REF
  • ↕ chr2:143860956-143866987:+:L1HS:REF
  • ↕ chr2:148188745-148194773:+:L1HS:REF
  • ↕ chr2:153007766-153013796:-:L1HS:REF
  • ↕ chr2:157566353-157572377:+:L1HS:REF
  • ↕ chr2:160114516-160120680:+:L1HS:REF
  • ↕ chr2:161892394-161892396:-:L1HS:NONREF
  • ↕ chr2:166988454-166994509:+:L1HS:REF
  • ↕ chr2:169248623-169254656:+:L1HS:REF
  • ↕ chr2:172315270-172321297:+:L1HS:REF
  • ↕ chr2:177973073-177979090:+:L1HS:REF
  • ↕ chr2:180833661-180839689:-:L1HS:REF
  • ↕ chr2:193170704-193171720:+:L1HS:REF
  • ↕ chr2:193212420-193218448:-:L1HS:REF
  • ↕ chr2:196905587-196911636:+:L1HS:REF
  • ↕ chr2:213567231-213573262:-:L1HS:REF
  • ↕ chr2:230337069-230342513:-:L1HS:REF
  • ↕ chr2:232149196-232155229:-:L1HS:REF
  • ↕ chr3:3963076-3969110:+:L1HS:REF
  • ↕ chr3:4916534-4922591:+:L1HS:REF
  • ↕ chr3:11488672-11492490:-:L1HS:REF
  • ↕ chr3:17858274-17861391:-:L1HS:REF
  • ↕ chr3:18516080-18520244:+:L1HS:REF
  • ↕ chr3:26036528-26042769:-:L1HS:REF
  • ↕ chr3:29108111-29112113:-:L1HS:REF
  • ↕ chr3:35454617-35458296:+:L1HS:REF
  • ↕ chr3:46783105-46789138:-:L1HS:REF
  • ↕ chr3:54394322-54400323:-:L1HS:REF
  • ↕ chr3:55754551-55754553:+:L1HS:NONREF
  • ↕ chr3:77763677-77769678:-:L1HS:REF
  • ↕ chr3:80541011-80541013:-:L1HS:NONREF
  • ↕ chr3:82337499-82339442:+:L1HS:REF
  • ↕ chr3:85527417-85527419:+:L1HS:NONREF
  • ↕ chr3:89460825-89466856:-:L1HS:REF
  • ↕ chr3:90169567-90175598:-:L1HS:REF
  • ↕ chr3:103556537-103562569:-:L1HS:REF
  • ↕ chr3:108749400-108755425:+:L1HS:REF
  • ↕ chr3:109199872-109205903:+:L1HS:REF
  • ↕ chr3:110888814-110890548:+:L1HS:REF
  • ↕ chr3:116359999-116366026:+:L1HS:REF
  • ↕ chr3:123871878-123871880:+:L1HS:NONREF
  • ↕ chr3:132946006-132952034:-:L1HS:REF
  • ↕ chr3:136479056-136485103:-:L1HS:REF
  • ↕ chr3:136963693-136969736:-:L1HS:REF
  • ↕ chr3:139590956-139596035:+:L1HS:REF
  • ↕ chr3:158019676-158025704:+:L1HS:REF
  • ↕ chr3:159095379-159101394:-:L1HS:REF
  • ↕ chr3:163236941-163242962:+:L1HS:REF
  • ↕ chr3:164291525-164296426:+:L1HS:REF
  • ↕ chr3:190964647-190965526:-:L1HS:REF
  • ↕ chr4:14755114-14761144:+:L1HS:REF
  • ↕ chr4:15841546-15847572:+:L1HS:REF
  • ↕ chr4:16942776-16944630:+:L1HS:REF
  • ↕ chr4:19077911-19083929:-:L1HS:REF
  • ↕ chr4:21159390-21165421:+:L1HS:REF
  • ↕ chr4:23614771-23620793:+:L1HS:REF
  • ↕ chr4:52538471-52544498:+:L1HS:REF
  • ↕ chr4:52816456-52822486:+:L1HS:REF
  • ↕ chr4:53502121-53502123:-:L1HS:NONREF
  • ↕ chr4:57562316-57568347:-:L1HS:REF
  • ↕ chr4:59078847-59084877:+:L1HS:REF
  • ↕ chr4:61939927-61945962:-:L1HS:REF
  • ↕ chr4:62726948-62732969:-:L1HS:REF
  • ↕ chr4:69664009-69667565:+:L1HS:REF
  • ↕ chr4:70015396-70019676:-:L1HS:REF
  • ↕ chr4:74717539-74723587:-:L1HS:REF
  • ↕ chr4:78105735-78111765:+:L1HS:REF
  • ↕ chr4:79704552-79710581:+:L1HS:REF
  • ↕ chr4:79937715-79943746:+:L1HS:REF
  • ↕ chr4:79966907-79972933:+:L1HS:REF
  • ↕ chr4:87347103-87353146:-:L1HS:REF
  • ↕ chr4:91437491-91443691:+:L1HS:REF
  • ↕ chr4:91978211-91984413:+:L1HS:REF
  • ↕ chr4:93608283-93614338:-:L1HS:REF
  • ↕ chr4:93638307-93644337:-:L1HS:REF
  • ↕ chr4:98592435-98598463:-:L1HS:REF
  • ↕ chr4:106571057-106577070:-:L1HS:REF
  • ↕ chr4:110690112-110693684:-:L1HS:REF
  • ↕ chr4:111894801-111900831:+:L1HS:REF
  • ↕ chr4:119948726-119954758:-:L1HS:REF
  • ↕ chr4:135178140-135183747:-:L1HS:REF
  • ↕ chr4:136293494-136299546:-:L1HS:REF
  • ↕ chr4:137496278-137500000:+:L1HS:REF
  • ↕ chr4:144809658-144810951:+:L1HS:REF
  • ↕ chr4:146304143-146304145:+:L1HS:NONREF
  • ↕ chr4:166449405-166449678:-:L1HS:REF
  • ↕ chr4:166569976-166576007:+:L1HS:REF
  • ↕ chr4:166755895-166761908:+:L1HS:REF
  • ↕ chr4:166850455-166851634:+:L1HS:REF
  • ↕ chr4:169515501-169521532:-:L1HS:REF
  • ↕ chr5:4500001-4502372:-:L1HS:REF
  • ↕ chr5:13416497-13422525:+:L1HS:REF
  • ↕ chr5:15906515-15912550:-:L1HS:REF
  • ↕ chr5:21207622-21207624:+:L1HS:NONREF
  • ↕ chr5:34147845-34154031:+:L1HS:REF
  • ↕ chr5:52086499-52088220:-:L1HS:REF
  • ↕ chr5:58384174-58390206:+:L1HS:REF
  • ↕ chr5:66750283-66754219:+:L1HS:REF
  • ↕ chr5:79778884-79784938:-:L1HS:REF
  • ↕ chr5:81616090-81622140:+:L1HS:REF
  • ↕ chr5:86510690-86516743:+:L1HS:REF
  • ↕ chr5:90154963-90154965:+:L1HS:NONREF
  • ↕ chr5:102131356-102137385:+:L1HS:REF
  • ↕ chr5:102189483-102194435:+:L1HS:REF
  • ↕ chr5:105513236-105519274:-:L1HS:REF
  • ↕ chr5:106599671-106599673:+:L1HS:NONREF
  • ↕ chr5:109259387-109265418:+:L1HS:REF
  • ↕ chr5:111302238-111308262:+:L1HS:REF
  • ↕ chr5:116113364-116113366:-:L1HS:NONREF
  • ↕ chr5:119684785-119690814:-:L1HS:REF
  • ↕ chr5:133583288-133589299:+:L1HS:REF
  • ↕ chr5:137679083-137679085:-:L1HS:NONREF
  • ↕ chr5:146609485-146615534:+:L1HS:REF
  • ↕ chr5:152886441-152892473:-:L1HS:REF
  • ↕ chr5:153070982-153077008:-:L1HS:REF
  • ↕ chr5:156061919-156067966:-:L1HS:REF
  • ↕ chr5:160709608-160715639:-:L1HS:REF
  • ↕ chr5:162530742-162531677:-:L1HS:REF
  • ↕ chr5:166141191-166145692:-:L1HS:REF
  • ↕ chr5:166966760-166972815:-:L1HS:REF
  • ↕ chr5:173402796-173408828:-:L1HS:REF
  • ↕ chr5:177772245-177778274:+:L1HS:REF
  • ↕ chr6:2417774-2423803:-:L1HS:REF
  • ↕ chr6:19764892-19770918:+:L1HS:REF
  • ↕ chr6:51874783-51880802:+:L1HS:REF
  • ↕ chr6:69495362-69500000:+:L1HS:REF
  • ↕ chr6:70010347-70016552:+:L1HS:REF
  • ↕ chr6:72988654-72994686:-:L1HS:REF
  • ↕ chr6:76875759-76877075:-:L1HS:REF
  • ↕ chr6:83333952-83339981:+:L1HS:REF
  • ↕ chr6:84608436-84614463:+:L1HS:REF
  • ↕ chr6:86000000-86005073:-:L1HS:REF
  • ↕ chr6:93865738-93871783:-:L1HS:REF
  • ↕ chr6:94197995-94204060:-:L1HS:REF
  • ↕ chr6:98703059-98708329:+:L1HS:REF
  • ↕ chr6:112703745-112709778:+:L1HS:REF
  • ↕ chr6:117102131-117108163:+:L1HS:REF
  • ↕ chr6:121162716-121168725:+:L1HS:REF
  • ↕ chr6:123532791-123532793:-:L1HS:NONREF
  • ↕ chr6:128998385-129000000:+:L1HS:REF
  • ↕ chr6:133020691-133026746:-:L1HS:REF
  • ↕ chr6:142128962-142128964:-:L1HS:NONREF
  • ↕ chr6:147842450-147842452:+:L1HS:NONREF
  • ↕ chr6:156034135-156040165:+:L1HS:REF
  • ↕ chr6:156324980-156331010:-:L1HS:REF
  • ↕ chr6:157547703-157547705:-:L1HS:NONREF
  • ↕ chr7:7465092-7471120:+:L1HS:REF
  • ↕ chr7:8351723-8353975:+:L1HS:REF
  • ↕ chr7:12497211-12500000:+:L1HS:REF
  • ↕ chr7:25041860-25047891:-:L1HS:REF
  • ↕ chr7:30439242-30445274:+:L1HS:REF
  • ↕ chr7:49680245-49686300:-:L1HS:REF
  • ↕ chr7:57539590-57540834:+:L1HS:REF
  • ↕ chr7:63148831-63154859:-:L1HS:REF
  • ↕ chr7:66286853-66292884:-:L1HS:REF
  • ↕ chr7:70197328-70203357:+:L1HS:REF
  • ↕ chr7:91173443-91179517:+:L1HS:REF
  • ↕ chr7:93787624-93793679:-:L1HS:REF
  • ↕ chr7:97613656-97619688:+:L1HS:REF
  • ↕ chr7:108188818-108188820:+:L1HS:NONREF
  • ↕ chr7:110707004-110713024:-:L1HS:REF
  • ↕ chr7:111243515-111249546:-:L1HS:REF
  • ↕ chr7:111963193-111969223:+:L1HS:REF
  • ↕ chr7:125179570-125181978:-:L1HS:REF
  • ↕ chr7:141062014-141068042:-:L1HS:REF
  • ↕ chr7:141920659-141926712:-:L1HS:REF
  • ↕ chr7:143121570-143121572:+:L1HS:NONREF
  • ↕ chr7:147842591-147848623:-:L1HS:REF
  • ↕ chr7:150597094-150602628:+:L1HS:REF
  • ↕ chr8:8470859-8476906:+:L1HS:REF
  • ↕ chr8:27113618-27119645:+:L1HS:REF
  • ↕ chr8:71486984-71486986:-:L1HS:NONREF
  • ↕ chr8:72875538-72881588:-:L1HS:REF
  • ↕ chr8:75621331-75627355:-:L1HS:REF
  • ↕ chr8:88685705-88691760:+:L1HS:REF
  • ↕ chr8:91522091-91528121:-:L1HS:REF
  • ↕ chr8:104739851-104745873:-:L1HS:REF
  • ↕ chr8:104959062-104964830:-:L1HS:REF
  • ↕ chr8:121329878-121334807:-:L1HS:REF
  • ↕ chr8:127311575-127315431:+:L1HS:REF
  • ↕ chr8:135875862-135881890:+:L1HS:REF
  • ↕ chr8:136438074-136444105:-:L1HS:REF
  • ↕ chr9:20655632-20658802:-:L1HS:REF
  • ↕ chr9:28111895-28117865:-:L1HS:REF
  • ↕ chr9:63913382-63916426:+:L1HS:REF
  • ↕ chr9:83049539-83055571:-:L1HS:REF
  • ↕ chr9:90149604-90155634:+:L1HS:REF
  • ↕ chr9:94113535-94119565:-:L1HS:REF
  • ↕ chr9:95697585-95703604:+:L1HS:REF
  • ↕ chr9:99498741-99500000:+:L1HS:REF
  • ↕ chr9:103237485-103241471:+:L1HS:REF
  • ↕ chr9:110417102-110423126:+:L1HS:REF
  • ↕ chr9:110791097-110797129:+:L1HS:REF
  • ↕ chr9:112798107-112804159:-:L1HS:REF
  • ↕ chr10:5245354-5251383:+:L1HS:REF
  • ↕ chr10:6369617-6375667:-:L1HS:REF
  • ↕ chr10:19088601-19094618:-:L1HS:REF
  • ↕ chr10:25418756-25418758:-:L1HS:NONREF
  • ↕ chr10:33510845-33516876:-:L1HS:REF
  • ↕ chr10:37995443-38000000:+:L1HS:REF
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  • ↕ chr10:85355506-85361538:+:L1HS:REF
  • ↕ chr10:98782941-98788971:-:L1HS:REF
  • ↕ chr10:105377346-105383377:-:L1HS:REF
  • ↕ chr10:105775520-105781551:-:L1HS:REF
  • ↕ chr10:108310130-108316139:-:L1HS:REF
  • ↕ chr11:5914493-5918448:+:L1HS:REF
  • ↕ chr11:24327951-24334001:+:L1HS:REF
  • ↕ chr11:25500009-25502139:-:L1HS:REF
  • ↕ chr11:31315654-31321680:-:L1HS:REF
  • ↕ chr11:36551606-36557636:-:L1HS:REF
  • ↕ chr11:48847694-48853724:-:L1HS:REF
  • ↕ chr11:54849946-54851079:+:L1HS:REF
  • ↕ chr11:58000000-58000187:-:L1HS:REF
  • ↕ chr11:78677772-78683802:-:L1HS:REF
  • ↕ chr11:82155865-82161891:+:L1HS:REF
  • ↕ chr11:85324758-85330821:+:L1HS:REF
  • ↕ chr11:87340031-87346061:-:L1HS:REF
  • ↕ chr11:90400067-90406098:-:L1HS:REF
  • ↕ chr11:90966271-90972302:-:L1HS:REF
  • ↕ chr11:93420986-93427031:+:L1HS:REF
  • ↕ chr11:95436216-95442246:+:L1HS:REF
  • ↕ chr11:108685166-108685556:-:L1HS:REF
  • ↕ chr11:109177494-109183526:-:L1HS:REF
  • ↕ chr11:115024803-115024805:+:L1HS:NONREF
  • ↕ chr11:125536609-125542640:+:L1HS:REF
  • ↕ chr12:3500000-3505228:-:L1HS:REF
  • ↕ chr12:33172858-33172860:-:L1HS:NONREF
  • ↕ chr12:33864388-33864390:-:L1HS:NONREF
  • ↕ chr12:38799646-38805673:+:L1HS:REF
  • ↕ chr12:44108220-44114234:-:L1HS:REF
  • ↕ chr12:51562631-51568657:-:L1HS:REF
  • ↕ chr12:54788573-54794627:+:L1HS:REF
  • ↕ chr12:55096256-55102283:-:L1HS:REF
  • ↕ chr12:69773410-69779441:-:L1HS:REF
  • ↕ chr12:73283667-73289668:-:L1HS:REF
  • ↕ chr12:74874868-74880901:+:L1HS:REF
  • ↕ chr12:101146043-101152064:+:L1HS:REF
  • ↕ chr12:108996947-109000000:+:L1HS:REF
  • ↕ chr12:126299023-126305038:-:L1HS:REF
  • ↕ chr13:19496786-19500000:+:L1HS:REF
  • ↕ chr13:31302314-31308370:+:L1HS:REF
  • ↕ chr13:34480262-34486294:-:L1HS:REF
  • ↕ chr13:48465555-48471566:+:L1HS:REF
  • ↕ chr13:54572234-54573121:+:L1HS:REF
  • ↕ chr13:60888200-60888202:-:L1HS:NONREF
  • ↕ chr13:74426326-74432354:+:L1HS:REF
  • ↕ chr13:76612823-76618851:-:L1HS:REF
  • ↕ chr13:92685561-92691592:-:L1HS:REF
  • ↕ chr13:97667408-97673440:-:L1HS:REF
  • ↕ chr13:105382665-105383251:-:L1HS:REF
  • ↕ chr13:108510472-108516495:-:L1HS:REF
  • ↕ chr14:30684809-30690837:-:L1HS:REF
  • ↕ chr14:44705080-44711104:-:L1HS:REF
  • ↕ chr14:45477110-45483169:-:L1HS:REF
  • ↕ chr14:46727484-46727758:-:L1HS:REF
  • ↕ chr14:48187082-48193113:+:L1HS:REF
  • ↕ chr14:51794601-51800632:-:L1HS:REF
  • ↕ chr14:52201038-52201040:-:L1HS:NONREF
  • ↕ chr14:61055116-61061148:-:L1HS:REF
  • ↕ chr14:62535851-62541882:+:L1HS:REF
  • ↕ chr14:63116706-63122735:-:L1HS:REF
  • ↕ chr14:70547290-70553322:+:L1HS:REF
  • ↕ chr14:79314060-79314943:+:L1HS:REF
  • ↕ chr15:47215130-47215132:-:L1HS:NONREF
  • ↕ chr15:51417216-51423246:-:L1HS:REF
  • ↕ chr15:54926081-54932099:-:L1HS:REF
  • ↕ chr15:83450804-83456834:-:L1HS:REF
  • ↕ chr15:87509891-87515920:+:L1HS:REF
  • ↕ chr16:9584490-9590522:-:L1HS:REF
  • ↕ chr16:32587481-32588397:-:L1HS:REF
  • ↕ chr16:33952564-33958612:-:L1HS:REF
  • ↕ chr16:34118474-34119193:+:L1HS:REF
  • ↕ chr16:35608475-35614501:-:L1HS:REF
  • ↕ chr16:54042096-54048145:+:L1HS:REF
  • ↕ chr16:65690011-65696020:+:L1HS:REF
  • ↕ chr16:68583448-68589505:-:L1HS:REF
  • ↕ chr16:80727089-80730717:+:L1HS:REF
  • ↕ chr16:83637252-83643296:+:L1HS:REF
  • ↕ chr17:9615985-9622015:+:L1HS:REF
  • ↕ chr17:66596579-66602595:-:L1HS:REF
  • ↕ chr17:66641175-66641177:+:L1HS:NONREF
  • ↕ chr17:69000000-69005148:-:L1HS:REF
  • ↕ chr17:70458956-70464987:+:L1HS:REF
  • ↕ chr18:535701-541755:+:L1HS:REF
  • ↕ chr18:4477329-4478177:+:L1HS:REF
  • ↕ chr18:5684668-5687891:+:L1HS:REF
  • ↕ chr18:13975860-13981891:-:L1HS:REF
  • ↕ chr18:37819737-37825798:+:L1HS:REF
  • ↕ chr18:41775014-41781045:+:L1HS:REF
  • ↕ chr18:44021279-44024826:-:L1HS:REF
  • ↕ chr18:47660373-47666427:+:L1HS:REF
  • ↕ chr18:50343959-50349987:-:L1HS:REF
  • ↕ chr18:62906292-62912314:+:L1HS:REF
  • ↕ chr18:67603633-67605600:+:L1HS:REF
  • ↕ chr18:70746549-70752581:-:L1HS:REF
  • ↕ chr18:72966526-72972556:-:L1HS:REF
  • ↕ chr18:75846851-75852883:+:L1HS:REF
  • ↕ chr19:43864494-43867300:-:L1HS:REF
  • ↕ chr20:11632779-11638837:+:L1HS:REF
  • ↕ chr20:12801017-12807044:-:L1HS:REF
  • ↕ chr20:23426108-23432140:+:L1HS:REF
  • ↕ chr20:39977475-39977785:+:L1HS:REF
  • ↕ chr21:22253869-22253871:-:L1HS:NONREF
  • ↕ chr22:15214621-15220667:-:L1HS:REF
  • ↕ chr22:22131969-22131971:-:L1HS:NONREF
  • ↕ chr22:22361255-22361257:+:L1HS:NONREF
  • ↕ chr22:28059912-28059914:-:L1HS:NONREF
  • ↕ chr22:28663283-28669315:+:L1HS:REF
  • ↕ chr22:34549683-34555708:-:L1HS:REF
  • ↕ chr22:48985761-48991792:-:L1HS:REF
  • ↕ chrX:23238516-23244575:+:L1HS:REF
  • ↕ chrX:26314417-26320446:-:L1HS:REF
  • ↕ chrX:50019456-50025505:-:L1HS:REF
  • ↕ chrX:54118685-54124744:-:L1HS:REF
  • ↕ chrX:56695884-56701916:+:L1HS:REF
  • ↕ chrX:64013267-64019286:-:L1HS:REF
  • ↕ chrX:73106142-73112170:+:L1HS:REF
  • ↕ chrX:73380991-73387013:+:L1HS:REF
  • ↕ chrX:76233354-76239154:+:L1HS:REF
  • ↕ chrX:76322775-76328806:-:L1HS:REF
  • ↕ chrX:80905077-80905430:-:L1HS:REF
  • ↕ chrX:81841153-81847184:+:L1HS:REF
  • ↕ chrX:83059584-83065637:-:L1HS:REF
  • ↕ chrX:83542396-83548420:+:L1HS:REF
  • ↕ chrX:83838051-83839860:-:L1HS:REF
  • ↕ chrX:85733685-85734499:+:L1HS:REF
  • ↕ chrX:87821407-87827419:+:L1HS:REF
  • ↕ chrX:92254241-92256469:-:L1HS:REF
  • ↕ chrX:96057824-96063842:-:L1HS:REF
  • ↕ chrX:106469285-106475319:+:L1HS:REF
  • ↕ chrX:119435468-119441493:-:L1HS:REF
  • ↕ chrX:127362223-127368248:+:L1HS:REF
  • ↕ chrX:130517377-130523407:+:L1HS:REF
  • ↕ chrX:141421202-141427246:-:L1HS:REF
  • ↕ chrX:142477849-142483853:+:L1HS:REF
  • ↕ chrX:147653734-147659767:+:L1HS:REF
  • ↕ chrX:149178166-149184185:-:L1HS:REF
  • ↕ chrX:151330320-151336351:+:L1HS:REF
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