Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr5 | 78848085 | 78854204 | chr5:78848085-78854204:-:L1PA3:REF | L1PA3 | REF | full-length | ARSB | 0.15 |
0.97 |
0.97 |
0.97 |
0.93 |
0.95 |
0.95 |
0.95 |
0.96 |
0.94 |
0.91 |
— |
chr5 | 78866805 | 78872828 | chr5:78866805-78872828:+:L1PA2:REF | L1PA2 | REF | full-length | ARSB | 0.56 |
0.98 |
0.98 |
0.92 |
0.43 |
0.96 |
0.98 |
0.97 |
0.98 |
0.96 |
0.93 |
0.99 |
chr5 | 78939282 | 78945425 | chr5:78939282-78945425:-:L1PA4:REF | L1PA4 | REF | full-length | ARSB | 0.29 |
0.93 |
0.96 |
0.91 |
0.92 |
0.97 |
0.98 |
0.98 |
0.97 |
0.93 |
0.97 |
0.97 |
chr5 | 79778884 | 79784938 | chr5:79778884-79784938:-:L1HS:REF | L1HS | REF | full-length | CMYA5 | 0.28 |
0.64 |
0.97 |
0.58 |
0.06 |
0.71 |
0.48 |
0.65 |
0.44 |
0.68 |
0.84 |
0.98 |
chr5 | 79902294 | 79908448 | chr5:79902294-79908448:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
— | 0.88 |
0.44 |
0.78 |
0.62 |
0.68 |
0.8 |
— | 0.75 |
0.83 |
0.93 |
chr5 | 79910994 | 79917108 | chr5:79910994-79917108:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.04 |
— | 0.91 |
0.03 |
0.7 |
0.16 |
0.03 |
0.12 |
— | 0.74 |
0.25 |
— |
chr5 | 80391144 | 80397265 | chr5:80391144-80397265:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.52 |
0.97 |
0.95 |
0.94 |
0.91 |
0.78 |
0.88 |
0.91 |
0.97 |
0.95 |
0.81 |
0.97 |
chr5 | 81373066 | 81379495 | chr5:81373066-81379495:+:L1PA7:REF | L1PA7 | REF | full-length | ACOT12 | 0.02 |
0.97 |
0.96 |
0.67 |
0.9 |
0.82 |
0.73 |
0.9 |
0.93 |
0.92 |
0.88 |
— |
chr5 | 81591849 | 81598022 | chr5:81591849-81598022:+:L1PA4:REF | L1PA4 | REF | full-length | SSBP2 | 0.97 |
0.94 |
0.97 |
0.97 |
0.89 |
0.98 |
0.81 |
0.98 |
0.98 |
0.97 |
0.98 |
0.98 |
chr5 | 81616090 | 81622140 | chr5:81616090-81622140:+:L1HS:REF | L1HS | REF | full-length | SSBP2 | 0.98 |
0.98 |
0.98 |
0.98 |
0.1 |
0.85 |
0.89 |
0.88 |
0.56 |
0.97 |
0.98 |
0.99 |
chr5 | 82429400 | 82435423 | chr5:82429400-82435423:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.38 |
0.95 |
0.94 |
0.84 |
0.11 |
0.9 |
0.93 |
0.91 |
0.91 |
0.93 |
0.9 |
0.98 |
chr5 | 82932443 | 82938460 | chr5:82932443-82938460:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.34 |
0.95 |
0.97 |
0.79 |
0.87 |
0.86 |
0.84 |
0.92 |
0.93 |
0.05 |
0.95 |
0.98 |
chr5 | 83457799 | 83463817 | chr5:83457799-83463817:-:L1PA2:REF | L1PA2 | REF | full-length | VCAN | 0.18 |
0.86 |
0.81 |
0.77 |
0.09 |
0.81 |
0.79 |
0.83 |
0.81 |
— | 0.84 |
0.77 |
chr5 | 83793611 | 83799642 | chr5:83793611-83799642:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.9 |
0.91 |
0.78 |
0.12 |
0.82 |
0.63 |
0.95 |
0.9 |
0.82 |
0.97 |
0.99 |
chr5 | 84050337 | 84056479 | chr5:84050337-84056479:+:L1PA5:REF | L1PA5 | REF | full-length | EDIL3 | 0.01 |
0.74 |
0.95 |
0.69 |
0.93 |
0.64 |
0.33 |
0.97 |
0.97 |
0.85 |
0.97 |
0.99 |
chr5 | 85638451 | 85644538 | chr5:85638451-85644538:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
0.07 |
0.91 |
0.88 |
0.13 |
0.76 |
0.79 |
0.53 |
0.74 |
0.01 |
0.66 |
0.81 |
chr5 | 85657593 | 85663641 | chr5:85657593-85663641:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.0 |
0.28 |
0.83 |
0.52 |
0.06 |
0.66 |
0.86 |
0.76 |
0.88 |
0.01 |
0.7 |
0.9 |
chr5 | 86265809 | 86271139 | chr5:86265809-86271139:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.02 |
0.82 |
0.66 |
0.29 |
0.85 |
0.46 |
0.12 |
0.61 |
0.92 |
0.74 |
0.59 |
0.98 |
chr5 | 86510690 | 86516743 | chr5:86510690-86516743:+:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.91 |
0.87 |
0.81 |
0.06 |
0.8 |
0.88 |
0.83 |
0.94 |
0.89 |
0.82 |
0.98 |
chr5 | 86772323 | 86778600 | chr5:86772323-86778600:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.43 |
0.59 |
0.12 |
0.94 |
0.44 |
0.36 |
0.56 |
0.98 |
0.63 |
0.49 |
0.97 |
chr5 | 87212103 | 87218330 | chr5:87212103-87218330:-:L1PA7:REF | L1PA7 | REF | full-length | LOC101929380 | 0.08 |
0.85 |
0.96 |
0.63 |
0.85 |
0.92 |
0.75 |
0.98 |
0.95 |
0.93 |
0.85 |
0.99 |
chr5 | 87918991 | 87925112 | chr5:87918991-87925112:-:L1PA6:REF | L1PA6 | REF | full-length | — | 0.01 |
0.49 |
0.59 |
0.35 |
0.83 |
0.32 |
0.37 |
0.73 |
0.72 |
0.6 |
0.12 |
0.79 |
chr5 | 88009454 | 88015622 | chr5:88009454-88015622:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.03 |
0.35 |
0.94 |
0.37 |
0.88 |
0.74 |
0.21 |
0.71 |
0.93 |
0.49 |
0.72 |
0.99 |
chr5 | 88052330 | 88058345 | chr5:88052330-88058345:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.79 |
0.74 |
0.58 |
0.1 |
0.53 |
0.77 |
0.74 |
0.73 |
0.81 |
0.59 |
0.84 |
chr5 | 89219912 | 89224332 | chr5:89219912-89224332:+:L1P2:REF | L1P2 | REF | 3prime-truncated | MEF2C-AS1 | 0.39 |
0.94 |
0.97 |
0.69 |
0.9 |
0.96 |
0.12 |
0.95 |
0.98 |
0.97 |
0.95 |
0.99 |
chr5 | 89621547 | 89627683 | chr5:89621547-89627683:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.12 |
0.57 |
0.49 |
0.48 |
0.61 |
0.74 |
0.41 |
0.52 |
0.67 |
0.5 |
0.47 |
0.98 |
chr5 | 90073229 | 90079236 | chr5:90073229-90079236:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.62 |
0.91 |
0.65 |
0.06 |
0.75 |
0.69 |
0.65 |
0.96 |
0.7 |
0.69 |
0.97 |
chr5 | 90154963 | 90154967 | chr5:90154963-90154967:+:L1HS:NONREF | L1HS | KNR | — | LINC01339 | 0.02 |
0.92 |
— | 0.57 |
0.17 |
0.78 |
0.8 |
0.82 |
0.88 |
0.96 |
0.73 |
0.98 |
chr5 | 90208331 | 90214364 | chr5:90208331-90214364:+:L1PA2:REF | L1PA2 | REF | full-length | LINC01339 | 0.01 |
0.85 |
0.88 |
0.54 |
0.05 |
0.74 |
0.68 |
0.73 |
0.59 |
0.01 |
0.75 |
0.98 |
chr5 | 90662588 | 90668637 | chr5:90662588-90668637:-:L1PA3:REF | L1PA3 | REF | full-length | ADGRV1 | 0.89 |
0.84 |
0.94 |
0.66 |
0.09 |
0.74 |
0.58 |
0.73 |
0.71 |
0.41 |
0.79 |
0.92 |
chr5 | 90816413 | 90822442 | chr5:90816413-90822442:-:L1PA4:REF | L1PA4 | REF | full-length | ADGRV1 | 0.81 |
0.89 |
0.89 |
0.85 |
0.78 |
0.73 |
0.76 |
0.75 |
0.87 |
0.88 |
0.78 |
0.89 |
chr5 | 90923630 | 90929658 | chr5:90923630-90929658:-:L1PA2:REF | L1PA2 | REF | full-length | ADGRV1 | 0.95 |
0.44 |
0.98 |
0.98 |
0.09 |
0.95 |
0.98 |
0.96 |
0.65 |
0.61 |
0.97 |
0.98 |
chr5 | 91762133 | 91768161 | chr5:91762133-91768161:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | 0.72 |
0.89 |
0.54 |
0.65 |
0.61 |
0.52 |
0.79 |
— | 0.68 |
0.8 |
0.9 |
chr5 | 92193473 | 92199495 | chr5:92193473-92199495:-:L1PA2:REF | L1PA2 | REF | full-length | — | — | 0.67 |
0.8 |
0.75 |
0.01 |
0.66 |
0.3 |
0.9 |
0.8 |
0.86 |
0.96 |
0.87 |
chr5 | 92296968 | 92302985 | chr5:92296968-92302985:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.95 |
0.94 |
0.95 |
0.15 |
0.96 |
0.9 |
0.97 |
0.98 |
0.97 |
0.96 |
0.98 |
chr5 | 93213145 | 93219176 | chr5:93213145-93219176:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.92 |
0.96 |
0.93 |
0.07 |
0.95 |
0.91 |
0.93 |
0.94 |
0.9 |
0.96 |
0.96 |
chr5 | 93261035 | 93267065 | chr5:93261035-93267065:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.95 |
0.97 |
0.9 |
0.07 |
0.89 |
0.95 |
0.96 |
0.96 |
0.96 |
0.89 |
0.91 |
chr5 | 93522544 | 93529042 | chr5:93522544-93529042:+:L1PA8:REF | L1PA8 | REF | full-length | NR2F1-AS1 | 0.02 |
1.0 |
0.98 |
0.98 |
0.88 |
0.98 |
0.79 |
0.97 |
0.93 |
0.97 |
0.98 |
0.98 |
chr5 | 93856115 | 93857936 | chr5:93856115-93857936:-:L1PA3:REF | L1PA3 | REF | 3prime-truncated | FAM172A | 0.34 |
0.97 |
0.95 |
0.99 |
0.9 |
0.98 |
0.97 |
0.94 |
0.96 |
0.97 |
0.98 |
0.98 |
chr5 | 96103200 | 96109249 | chr5:96103200-96109249:-:L1PA3:REF | L1PA3 | REF | full-length | LOC101929710 | 0.28 |
0.77 |
0.98 |
0.97 |
0.9 |
0.98 |
0.97 |
0.98 |
0.97 |
0.97 |
0.97 |
0.97 |
chr5 | 96303464 | 96309906 | chr5:96303464-96309906:-:L1PA7:REF | L1PA7 | REF | full-length | LOC101929710 | 0.01 |
0.96 |
0.93 |
0.96 |
0.93 |
0.98 |
0.99 |
0.96 |
0.96 |
0.89 |
0.97 |
0.97 |
chr5 | 96355999 | 96361794 | chr5:96355999-96361794:-:L1PA8:REF | L1PA8 | REF | 3prime-truncated | LOC101929710 | 0.0 |
0.78 |
0.78 |
0.95 |
0.87 |
0.81 |
0.45 |
0.85 |
0.93 |
0.29 |
0.84 |
0.66 |
chr5 | 96555240 | 96561368 | chr5:96555240-96561368:+:L1PA4:REF | L1PA4 | REF | full-length | LOC101929710 | 0.01 |
0.8 |
0.85 |
0.97 |
0.85 |
0.91 |
0.57 |
0.89 |
0.94 |
0.4 |
0.9 |
0.85 |
chr5 | 97234257 | 97240422 | chr5:97234257-97240422:-:L1PA6:REF | L1PA6 | REF | full-length | — | 0.04 |
0.39 |
0.74 |
0.34 |
0.93 |
0.91 |
0.61 |
0.85 |
0.96 |
0.44 |
0.94 |
0.99 |
chr5 | 97302295 | 97307097 | chr5:97302295-97307097:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.01 |
0.85 |
0.38 |
0.04 |
0.87 |
0.8 |
0.48 |
0.75 |
0.94 |
0.15 |
0.77 |
0.97 |
chr5 | 97513923 | 97519943 | chr5:97513923-97519943:-:L1PA2:REF | L1PA2 | REF | full-length | LINC01340 | 0.01 |
0.94 |
0.62 |
0.46 |
0.54 |
0.76 |
0.69 |
0.79 |
0.91 |
0.32 |
0.95 |
0.98 |
chr5 | 97717792 | 97723895 | chr5:97717792-97723895:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.81 |
0.57 |
0.3 |
0.89 |
0.95 |
0.22 |
0.94 |
0.97 |
0.29 |
0.95 |
0.98 |
chr5 | 97809914 | 97815940 | chr5:97809914-97815940:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.81 |
0.77 |
0.7 |
0.58 |
0.91 |
0.31 |
0.95 |
0.96 |
0.43 |
0.94 |
0.98 |
chr5 | 98022598 | 98025962 | chr5:98022598-98025962:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.03 |
0.92 |
0.89 |
0.78 |
0.92 |
0.96 |
0.81 |
0.95 |
0.97 |
0.71 |
0.97 |
0.98 |
chr5 | 98113450 | 98119596 | chr5:98113450-98119596:+:L1PA5:REF | L1PA5 | REF | full-length | LINC01846 | 0.02 |
0.84 |
0.63 |
0.08 |
0.84 |
0.94 |
0.04 |
0.95 |
0.96 |
0.21 |
0.97 |
0.97 |