Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr22 | 28059912 | 28059914 | chr22:28059912-28059914:-:L1HS:NONREF | L1HS | KNR | — | TTC28 | 0.9 |
— | — | — | — | 0.85 |
— | 0.74 |
— | — | — | — |
chr22 | 28133242 | 28134796 | chr22:28133242-28134796:+:L1P1:REF | L1P1 | REF | 3prime-truncated | TTC28 | 0.4 |
0.76 |
0.98 |
0.99 |
0.91 |
0.97 |
1.0 |
0.98 |
0.98 |
0.95 |
0.96 |
0.32 |
chr22 | 28209186 | 28215291 | chr22:28209186-28215291:+:L1PA5:REF | L1PA5 | REF | full-length | TTC28 | 0.68 |
0.97 |
0.97 |
0.98 |
0.81 |
0.97 |
0.97 |
0.96 |
0.86 |
0.94 |
0.97 |
0.61 |
chr22 | 28386847 | 28392869 | chr22:28386847-28392869:-:L1PA3:REF | L1PA3 | REF | full-length | TTC28 | 0.8 |
0.93 |
0.95 |
0.82 |
0.86 |
0.94 |
0.96 |
0.93 |
0.95 |
0.95 |
0.93 |
0.82 |
chr22 | 28663283 | 28669315 | chr22:28663283-28669315:+:L1HS:REF | L1HS | REF | full-length | TTC28 | 0.01 |
0.02 |
0.87 |
0.04 |
0.05 |
0.95 |
0.06 |
0.96 |
0.73 |
0.01 |
0.93 |
0.98 |