Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr5 | 119684785 | 119690814 | chr5:119684785-119690814:-:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.91 |
0.73 |
0.65 |
0.85 |
0.78 |
0.67 |
0.72 |
0.95 |
0.55 |
0.82 |
0.98 |
chr5 | 119776586 | 119780799 | chr5:119776586-119780799:-:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | — | — | 0.84 |
0.71 |
0.56 |
— | 0.68 |
— | — | 0.23 |
0.89 |
0.98 |
chr5 | 119906031 | 119906624 | chr5:119906031-119906624:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.0 |
0.8 |
0.62 |
0.07 |
0.87 |
0.73 |
0.21 |
0.71 |
0.91 |
0.11 |
0.69 |
0.98 |
chr5 | 120126861 | 120133028 | chr5:120126861-120133028:-:L1PA4:REF | L1PA4 | REF | full-length | — | — | — | 0.63 |
0.43 |
0.82 |
0.97 |
0.22 |
0.77 |
0.88 |
0.27 |
0.97 |
0.96 |
chr5 | 120176046 | 120182173 | chr5:120176046-120182173:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.08 |
0.72 |
0.78 |
0.74 |
0.91 |
0.91 |
0.68 |
0.9 |
0.95 |
0.54 |
0.92 |
0.96 |
chr5 | 120421208 | 120427233 | chr5:120421208-120427233:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.09 |
0.88 |
0.84 |
0.59 |
0.26 |
0.9 |
0.63 |
0.98 |
0.96 |
0.53 |
0.97 |
0.97 |
chr5 | 120831425 | 120836963 | chr5:120831425-120836963:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.09 |
0.63 |
0.85 |
0.53 |
0.52 |
0.85 |
0.46 |
0.86 |
0.88 |
0.46 |
0.91 |
0.98 |
chr5 | 121064235 | 121070241 | chr5:121064235-121070241:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.08 |
0.77 |
0.75 |
0.6 |
0.09 |
0.82 |
0.23 |
0.88 |
0.97 |
0.19 |
0.9 |
0.98 |
chr5 | 121659901 | 121666048 | chr5:121659901-121666048:+:L1PA6:REF | L1PA6 | REF | full-length | — | — | — | — | — | 0.77 |
— | 0.15 |
0.85 |
— | — | 0.37 |
0.98 |
chr5 | 122377544 | 122383563 | chr5:122377544-122383563:-:L1PA2:REF | L1PA2 | REF | full-length | SNCAIP | 0.14 |
0.63 |
0.97 |
0.75 |
0.18 |
0.94 |
0.81 |
0.97 |
0.95 |
0.91 |
0.98 |
0.97 |
chr5 | 122509616 | 122515639 | chr5:122509616-122515639:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.8 |
0.91 |
0.77 |
0.63 |
0.84 |
0.45 |
0.94 |
0.93 |
0.93 |
0.94 |
0.94 |
chr5 | 122592542 | 122598662 | chr5:122592542-122598662:-:L1PA5:REF | L1PA5 | REF | full-length | LOC101927357 | 0.0 |
0.95 |
0.82 |
0.57 |
0.85 |
0.64 |
0.31 |
0.81 |
0.91 |
0.88 |
0.7 |
0.95 |
chr5 | 122630891 | 122636933 | chr5:122630891-122636933:-:L1PA4:REF | L1PA4 | REF | full-length | LINC02201 | 0.01 |
0.97 |
0.94 |
0.88 |
0.91 |
0.83 |
0.74 |
0.9 |
0.97 |
0.93 |
0.92 |
0.98 |
chr5 | 123236611 | 123242616 | chr5:123236611-123242616:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.25 |
0.89 |
0.94 |
0.74 |
0.23 |
0.78 |
0.89 |
0.89 |
0.95 |
— | 0.89 |
0.93 |
chr5 | 123250932 | 123257062 | chr5:123250932-123257062:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.97 |
0.81 |
0.66 |
0.86 |
0.68 |
0.47 |
0.84 |
0.9 |
0.82 |
0.78 |
0.97 |
chr5 | 123257063 | 123259414 | chr5:123257063-123259414:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.07 |
0.95 |
0.94 |
0.17 |
0.86 |
0.61 |
0.18 |
0.83 |
0.97 |
0.93 |
0.69 |
1.0 |
chr5 | 125359000 | 125365032 | chr5:125359000-125365032:-:L1PA2:REF | L1PA2 | REF | full-length | LOC101927421 | 0.01 |
0.86 |
0.85 |
0.58 |
0.13 |
0.92 |
0.7 |
0.9 |
0.85 |
0.84 |
0.85 |
0.88 |
chr5 | 126890286 | 126896333 | chr5:126890286-126896333:-:L1PA3:REF | L1PA3 | REF | full-length | MARCH3 | 0.97 |
0.96 |
0.97 |
0.79 |
0.29 |
0.96 |
0.98 |
0.93 |
0.83 |
0.95 |
0.93 |
0.97 |
chr5 | 126903810 | 126909817 | chr5:126903810-126909817:-:L1PA3:REF | L1PA3 | REF | full-length | MARCH3 | 0.96 |
0.98 |
0.97 |
0.64 |
0.9 |
0.98 |
0.98 |
0.98 |
0.98 |
— | 0.95 |
0.98 |
chr5 | 127103103 | 127109254 | chr5:127103103-127109254:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.53 |
0.72 |
0.04 |
0.89 |
0.57 |
0.43 |
0.66 |
0.88 |
0.7 |
0.64 |
0.85 |
chr5 | 127197142 | 127203292 | chr5:127197142-127203292:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.0 |
0.08 |
0.76 |
0.02 |
0.53 |
0.33 |
0.23 |
0.35 |
0.94 |
0.54 |
0.3 |
0.82 |
chr5 | 127540900 | 127545031 | chr5:127540900-127545031:-:L1P1:REF | L1P1 | REF | 3prime-truncated | PRRC1 | 0.9 |
0.94 |
0.95 |
0.97 |
0.92 |
0.98 |
0.98 |
0.9 |
0.97 |
0.93 |
0.94 |
0.93 |
chr5 | 127733931 | 127739952 | chr5:127733931-127739952:-:L1PA2:REF | L1PA2 | REF | full-length | CCDC192 | 0.1 |
0.94 |
0.86 |
0.65 |
0.26 |
0.91 |
0.87 |
0.95 |
0.58 |
0.76 |
0.91 |
0.93 |
chr5 | 127747107 | 127753135 | chr5:127747107-127753135:-:L1PA3:REF | L1PA3 | REF | full-length | CCDC192 | 0.17 |
0.04 |
0.97 |
0.85 |
0.19 |
0.91 |
0.95 |
0.97 |
0.89 |
0.24 |
0.98 |
0.98 |
chr5 | 128293846 | 128299849 | chr5:128293846-128299849:-:L1PA3:REF | L1PA3 | REF | full-length | FBN2 | 0.01 |
0.84 |
0.97 |
0.67 |
0.92 |
0.95 |
0.69 |
0.98 |
0.96 |
0.97 |
0.97 |
0.92 |
chr5 | 128649998 | 128656430 | chr5:128649998-128656430:-:L1PA7:REF | L1PA7 | REF | full-length | — | — | — | 0.74 |
0.35 |
0.9 |
— | 0.03 |
— | — | 0.86 |
0.53 |
0.96 |
chr5 | 128937637 | 128943755 | chr5:128937637-128943755:-:L1PA6:REF | L1PA6 | REF | full-length | — | 0.04 |
0.87 |
0.61 |
0.36 |
0.91 |
0.58 |
0.37 |
0.56 |
0.92 |
0.59 |
0.8 |
0.96 |
chr5 | 129285246 | 129291357 | chr5:129285246-129291357:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.95 |
0.69 |
0.37 |
0.88 |
0.66 |
0.43 |
0.7 |
0.93 |
0.6 |
0.76 |
0.97 |
chr5 | 129583659 | 129585360 | chr5:129583659-129585360:-:L1P3:REF | L1P3 | REF | 3prime-truncated | ADAMTS19 | 0.0 |
0.96 |
0.87 |
0.04 |
0.87 |
0.66 |
0.02 |
0.65 |
0.94 |
0.92 |
0.84 |
0.98 |
chr5 | 129803994 | 129805579 | chr5:129803994-129805579:-:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.0 |
0.64 |
0.56 |
0.1 |
0.82 |
0.49 |
0.04 |
0.49 |
0.9 |
0.73 |
0.53 |
0.92 |
chr5 | 130732094 | 130738109 | chr5:130732094-130738109:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.89 |
0.82 |
0.65 |
0.16 |
0.77 |
0.79 |
0.73 |
0.85 |
0.61 |
0.67 |
0.98 |
chr5 | 130783490 | 130789657 | chr5:130783490-130789657:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.87 |
0.68 |
0.4 |
0.91 |
0.74 |
0.38 |
0.72 |
0.95 |
0.28 |
0.64 |
0.98 |
chr5 | 130817737 | 130823763 | chr5:130817737-130823763:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.37 |
0.95 |
— | 0.19 |
0.88 |
0.88 |
0.88 |
0.97 |
0.27 |
0.83 |
0.98 |
chr5 | 130897566 | 130903669 | chr5:130897566-130903669:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.0 |
0.62 |
0.11 |
0.08 |
0.73 |
0.16 |
0.62 |
0.78 |
— | 0.51 |
0.01 |
chr5 | 131028721 | 131034857 | chr5:131028721-131034857:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.03 |
0.72 |
0.44 |
0.23 |
0.88 |
0.52 |
0.5 |
0.47 |
0.91 |
0.09 |
0.49 |
0.96 |
chr5 | 131308075 | 131312967 | chr5:131308075-131312967:-:L1PA3:REF | L1PA3 | REF | 3prime-truncated | CDC42SE2 | — | 0.0 |
0.96 |
0.0 |
0.04 |
0.99 |
0.05 |
0.97 |
0.83 |
0.01 |
0.98 |
0.57 |
chr5 | 131331966 | 131338103 | chr5:131331966-131338103:-:L1PA4:REF | L1PA4 | REF | full-length | CDC42SE2 | 0.98 |
0.99 |
0.99 |
0.96 |
0.82 |
0.99 |
0.98 |
0.98 |
0.99 |
— | 0.98 |
0.99 |
chr5 | 131893739 | 131899064 | chr5:131893739-131899064:-:L1P2:REF | L1P2 | REF | 3prime-truncated | MEIKIN | 0.02 |
0.37 |
0.67 |
0.17 |
0.87 |
0.62 |
0.09 |
0.63 |
0.89 |
0.3 |
0.56 |
0.83 |
chr5 | 132116469 | 132122838 | chr5:132116469-132122838:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.96 |
0.98 |
0.95 |
0.8 |
0.91 |
0.67 |
0.71 |
0.92 |
0.95 |
0.88 |
0.95 |
0.97 |
chr5 | 132513964 | 132519996 | chr5:132513964-132519996:+:L1PA2:REF | L1PA2 | REF | full-length | — | — | 0.62 |
0.87 |
0.16 |
0.16 |
0.85 |
0.83 |
0.92 |
0.87 |
0.85 |
0.95 |
0.93 |
chr5 | 133583288 | 133589299 | chr5:133583288-133589299:+:L1HS:REF | L1HS | REF | full-length | FSTL4 | 0.03 |
— | 0.87 |
0.71 |
0.32 |
0.34 |
0.84 |
0.82 |
0.24 |
0.93 |
0.8 |
0.92 |
chr5 | 134331307 | 134337485 | chr5:134331307-134337485:-:L1PA6:REF | L1PA6 | REF | full-length | CDKL3 | 0.54 |
0.94 |
0.98 |
0.96 |
0.88 |
0.94 |
0.96 |
0.94 |
0.96 |
0.95 |
0.95 |
0.95 |
chr5 | 136782799 | 136788829 | chr5:136782799-136788829:-:L1PA2:REF | L1PA2 | REF | full-length | — | — | — | 0.97 |
0.64 |
0.88 |
0.96 |
0.14 |
— | 0.97 |
0.83 |
0.8 |
0.6 |
chr5 | 137044642 | 137050656 | chr5:137044642-137050656:-:L1PA2:REF | L1PA2 | REF | full-length | SPOCK1 | — | — | — | — | 0.7 |
— | 0.86 |
— | — | — | 0.8 |
0.89 |
chr5 | 137968595 | 137974622 | chr5:137968595-137974622:+:L1PA3:REF | L1PA3 | REF | full-length | FAM13B | 0.96 |
0.41 |
0.97 |
0.96 |
0.93 |
0.98 |
0.99 |
0.99 |
0.97 |
0.97 |
0.99 |
0.98 |
chr5 | 139005423 | 139011486 | chr5:139005423-139011486:-:L1PA2:REF | L1PA2 | REF | full-length | SIL1 | 0.92 |
0.02 |
0.97 |
0.97 |
0.11 |
0.79 |
0.98 |
0.62 |
0.4 |
0.22 |
0.83 |
0.97 |
chr5 | 140593229 | 140593744 | chr5:140593229-140593744:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.85 |
0.9 |
0.97 |
0.96 |
0.15 |
0.73 |
0.82 |
0.62 |
0.95 |
0.94 |
0.84 |
0.98 |
chr5 | 142985516 | 142991590 | chr5:142985516-142991590:-:L1PA5:REF | L1PA5 | REF | full-length | ARHGAP26 | — | — | — | — | 0.4 |
— | — | — | — | — | 0.09 |
— |
chr5 | 143852080 | 143858214 | chr5:143852080-143858214:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.95 |
0.84 |
0.93 |
0.91 |
0.95 |
0.69 |
0.87 |
0.97 |
0.8 |
0.84 |
0.97 |
chr5 | 144049945 | 144056062 | chr5:144049945-144056062:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.7 |
0.71 |
0.64 |
0.89 |
0.82 |
0.18 |
0.86 |
0.85 |
0.52 |
0.79 |
0.67 |