Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr11 | 25643792 | 25649786 | chr11:25643792-25649786:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.06 |
0.9 |
0.79 |
0.65 |
0.72 |
0.84 |
0.79 |
0.82 |
0.97 |
0.54 |
0.76 |
0.98 |
chr11 | 25719115 | 25724896 | chr11:25719115-25724896:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.06 |
0.75 |
0.39 |
0.42 |
0.8 |
0.5 |
0.48 |
0.55 |
0.65 |
0.23 |
0.56 |
0.74 |
chr11 | 26113513 | 26119647 | chr11:26113513-26119647:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
— | 0.82 |
0.89 |
0.91 |
0.94 |
0.62 |
0.99 |
0.98 |
0.68 |
0.97 |
0.98 |
chr11 | 26451095 | 26457233 | chr11:26451095-26457233:+:L1PA3:REF | L1PA3 | REF | full-length | ANO3 | 0.02 |
0.14 |
0.73 |
0.46 |
0.88 |
0.69 |
0.51 |
0.76 |
0.95 |
0.63 |
0.78 |
0.71 |
chr11 | 26965118 | 26971134 | chr11:26965118-26971134:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.05 |
0.79 |
0.94 |
0.7 |
0.06 |
0.97 |
0.91 |
0.98 |
0.91 |
0.56 |
0.99 |
0.86 |
chr11 | 27219703 | 27225730 | chr11:27219703-27225730:+:L1PA2:REF | L1PA2 | REF | full-length | BBOX1-AS1 | 0.0 |
0.84 |
0.93 |
0.93 |
0.1 |
0.98 |
0.96 |
0.96 |
0.61 |
0.01 |
0.99 |
0.97 |
chr11 | 27682417 | 27688872 | chr11:27682417-27688872:-:L1PA7:REF | L1PA7 | REF | full-length | BDNF-AS | 0.0 |
0.85 |
0.97 |
0.55 |
0.86 |
0.95 |
0.24 |
0.95 |
0.96 |
0.29 |
0.91 |
0.98 |
chr11 | 27939073 | 27945209 | chr11:27939073-27945209:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | 0.75 |
0.96 |
— | 0.97 |
0.95 |
0.31 |
0.95 |
0.95 |
0.42 |
0.97 |
0.97 |
chr11 | 28216563 | 28222701 | chr11:28216563-28222701:-:L1PA5:REF | L1PA5 | REF | full-length | METTL15 | 0.89 |
0.95 |
0.96 |
0.97 |
0.89 |
0.97 |
0.99 |
0.98 |
0.99 |
0.94 |
0.98 |
0.98 |
chr11 | 28236554 | 28238756 | chr11:28236554-28238756:-:L1PA3:REF | L1PA3 | REF | 3prime-truncated | METTL15 | 0.93 |
0.9 |
0.97 |
0.98 |
0.92 |
0.98 |
0.98 |
0.98 |
0.97 |
— | 0.98 |
0.98 |
chr11 | 28372620 | 28378682 | chr11:28372620-28378682:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.07 |
0.97 |
0.95 |
0.95 |
0.61 |
0.96 |
0.8 |
0.97 |
0.97 |
0.74 |
0.98 |
0.99 |
chr11 | 29050742 | 29051784 | chr11:29050742-29051784:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.01 |
0.05 |
0.62 |
0.47 |
0.9 |
0.82 |
0.03 |
0.97 |
0.96 |
0.13 |
0.93 |
0.99 |
chr11 | 29794460 | 29798913 | chr11:29794460-29798913:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.09 |
0.24 |
0.72 |
0.81 |
0.85 |
0.67 |
0.86 |
0.9 |
0.89 |
0.68 |
0.78 |
0.9 |
chr11 | 30051207 | 30057234 | chr11:30051207-30057234:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.25 |
0.48 |
0.25 |
0.83 |
0.65 |
0.31 |
0.75 |
— | 0.3 |
0.61 |
0.88 |
chr11 | 30263143 | 30269287 | chr11:30263143-30269287:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.04 |
0.67 |
0.89 |
0.6 |
0.9 |
0.72 |
0.63 |
0.76 |
0.96 |
0.6 |
0.76 |
0.96 |
chr11 | 31315654 | 31321680 | chr11:31315654-31321680:-:L1HS:REF | L1HS | REF | full-length | DCDC1 | 0.02 |
0.93 |
0.97 |
0.82 |
0.1 |
0.79 |
0.86 |
0.88 |
0.96 |
0.96 |
0.82 |
0.98 |
chr11 | 31544010 | 31550144 | chr11:31544010-31550144:+:L1PA3:REF | L1PA3 | REF | full-length | ELP4 | 0.96 |
0.92 |
0.98 |
0.99 |
0.85 |
0.99 |
0.98 |
0.97 |
0.98 |
0.97 |
0.98 |
0.99 |
chr11 | 31740753 | 31746893 | chr11:31740753-31746893:+:L1PA4:REF | L1PA4 | REF | full-length | ELP4 | 0.97 |
0.96 |
0.97 |
0.98 |
0.92 |
0.98 |
0.98 |
0.97 |
0.97 |
0.97 |
0.98 |
0.98 |
chr11 | 32661712 | 32667810 | chr11:32661712-32667810:-:L1PA5:REF | L1PA5 | REF | full-length | CCDC73 | 0.04 |
0.74 |
0.89 |
0.4 |
0.9 |
0.63 |
0.35 |
0.53 |
0.92 |
0.82 |
0.78 |
0.97 |
chr11 | 32762628 | 32768484 | chr11:32762628-32768484:+:L1PA5:REF | L1PA5 | REF | full-length | CCDC73 | 0.0 |
0.87 |
0.87 |
0.84 |
0.87 |
0.55 |
0.51 |
0.65 |
0.93 |
0.75 |
0.54 |
0.95 |
chr11 | 32941250 | 32947256 | chr11:32941250-32947256:-:L1PA3:REF | L1PA3 | REF | full-length | QSER1 | 0.98 |
0.97 |
0.98 |
0.99 |
0.95 |
0.98 |
0.97 |
0.98 |
0.97 |
0.97 |
0.98 |
0.98 |
chr11 | 34691292 | 34692830 | chr11:34691292-34692830:-:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.94 |
0.98 |
0.97 |
0.91 |
0.08 |
0.8 |
0.97 |
0.93 |
— | 0.89 |
0.98 |
0.99 |
chr11 | 34760210 | 34764985 | chr11:34760210-34764985:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.74 |
0.85 |
0.86 |
0.83 |
0.91 |
0.78 |
0.91 |
0.82 |
0.96 |
— | 0.9 |
0.91 |
chr11 | 35702778 | 35708923 | chr11:35702778-35708923:+:L1PA3:REF | L1PA3 | REF | full-length | TRIM44 | 0.97 |
0.98 |
0.98 |
0.98 |
0.97 |
0.98 |
0.98 |
0.99 |
0.99 |
0.96 |
0.99 |
0.98 |
chr11 | 35754504 | 35760643 | chr11:35754504-35760643:-:L1PA4:REF | L1PA4 | REF | full-length | TRIM44 | 0.95 |
0.97 |
0.97 |
0.97 |
0.83 |
0.97 |
0.98 |
0.97 |
0.93 |
0.95 |
0.95 |
0.98 |
chr11 | 36551606 | 36557636 | chr11:36551606-36557636:-:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.93 |
0.94 |
0.81 |
0.09 |
0.88 |
0.93 |
0.88 |
0.89 |
0.76 |
0.87 |
0.98 |
chr11 | 37240712 | 37246716 | chr11:37240712-37246716:-:L1PA2:REF | L1PA2 | REF | full-length | — | — | 0.97 |
0.77 |
0.68 |
0.66 |
0.81 |
0.62 |
0.85 |
— | 0.49 |
0.73 |
0.99 |
chr11 | 38191740 | 38197885 | chr11:38191740-38197885:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.25 |
0.86 |
0.73 |
0.73 |
0.52 |
0.78 |
0.74 |
0.77 |
0.84 |
0.59 |
0.67 |
0.84 |
chr11 | 38811177 | 38813505 | chr11:38811177-38813505:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.01 |
0.41 |
0.63 |
0.63 |
0.85 |
0.83 |
0.4 |
0.84 |
0.95 |
0.17 |
0.68 |
0.98 |
chr11 | 38821101 | 38822410 | chr11:38821101-38822410:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.0 |
0.97 |
0.48 |
0.27 |
0.87 |
0.73 |
0.12 |
0.82 |
0.95 |
0.07 |
0.51 |
0.99 |
chr11 | 39231775 | 39235554 | chr11:39231775-39235554:+:L1PA8:REF | L1PA8 | REF | 3prime-truncated | — | 0.0 |
1.0 |
0.13 |
0.11 |
0.84 |
0.51 |
0.44 |
0.46 |
0.92 |
0.0 |
0.37 |
0.95 |
chr11 | 39755039 | 39761185 | chr11:39755039-39761185:+:L1PA4:REF | L1PA4 | REF | full-length | — | — | — | 0.47 |
0.3 |
0.67 |
— | 0.36 |
0.48 |
— | 0.21 |
0.41 |
— |
chr11 | 39846656 | 39852654 | chr11:39846656-39852654:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.93 |
0.86 |
0.72 |
0.77 |
0.8 |
0.89 |
0.81 |
0.97 |
0.69 |
0.85 |
— |
chr11 | 39881060 | 39887029 | chr11:39881060-39887029:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.07 |
0.44 |
0.3 |
0.13 |
0.87 |
0.44 |
0.17 |
0.44 |
0.92 |
0.1 |
0.47 |
0.95 |
chr11 | 39984014 | 39990193 | chr11:39984014-39990193:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.02 |
— | 0.46 |
0.12 |
0.89 |
0.3 |
0.16 |
0.38 |
— | 0.03 |
0.46 |
0.78 |
chr11 | 40451801 | 40452101 | chr11:40451801-40452101:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | LRRC4C | 0.01 |
0.32 |
0.41 |
0.18 |
0.86 |
0.46 |
0.25 |
0.42 |
0.86 |
0.02 |
0.48 |
0.85 |
chr11 | 40585472 | 40591501 | chr11:40585472-40591501:-:L1PA2:REF | L1PA2 | REF | full-length | LRRC4C | — | — | 0.46 |
0.3 |
0.46 |
0.56 |
0.5 |
0.56 |
0.9 |
0.17 |
0.65 |
0.92 |
chr11 | 40910564 | 40916694 | chr11:40910564-40916694:+:L1PA4:REF | L1PA4 | REF | full-length | LRRC4C | 0.0 |
0.13 |
0.27 |
0.07 |
0.86 |
0.46 |
0.47 |
0.47 |
0.82 |
0.01 |
0.44 |
0.97 |
chr11 | 41645094 | 41651525 | chr11:41645094-41651525:-:L1PA7:REF | L1PA7 | REF | full-length | — | — | 0.75 |
0.0 |
— | 0.65 |
0.12 |
0.07 |
0.18 |
— | 0.0 |
0.03 |
0.86 |
chr11 | 42376823 | 42382954 | chr11:42376823-42382954:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.02 |
0.53 |
0.14 |
0.14 |
0.83 |
0.47 |
0.05 |
0.36 |
0.9 |
0.04 |
0.31 |
0.91 |
chr11 | 42940332 | 42946342 | chr11:42940332-42946342:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.88 |
0.56 |
0.38 |
0.77 |
0.69 |
0.59 |
0.73 |
0.84 |
0.39 |
0.69 |
0.75 |
chr11 | 43095011 | 43101151 | chr11:43095011-43101151:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | 0.24 |
— | 0.8 |
— | 0.19 |
0.38 |
— | 0.05 |
0.42 |
0.1 |
chr11 | 43201230 | 43207380 | chr11:43201230-43207380:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.03 |
0.37 |
0.22 |
0.06 |
0.84 |
0.42 |
0.03 |
0.33 |
0.81 |
0.01 |
0.37 |
0.46 |
chr11 | 45122414 | 45128497 | chr11:45122414-45128497:-:L1PA4:REF | L1PA4 | REF | full-length | PRDM11 | 0.0 |
0.09 |
0.9 |
0.0 |
0.9 |
0.73 |
0.46 |
0.65 |
0.92 |
0.44 |
0.74 |
0.15 |
chr11 | 48292435 | 48297811 | chr11:48292435-48297811:+:L1P1:REF | L1P1 | REF | 3prime-truncated | OR4S1 | 0.0 |
0.05 |
0.28 |
0.07 |
0.87 |
0.3 |
0.03 |
0.41 |
0.75 |
0.02 |
0.3 |
0.14 |
chr11 | 48527917 | 48534075 | chr11:48527917-48534075:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.25 |
0.47 |
0.07 |
0.69 |
0.51 |
0.05 |
0.42 |
0.7 |
0.08 |
0.48 |
0.25 |
chr11 | 48611749 | 48617901 | chr11:48611749-48617901:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.16 |
0.22 |
0.03 |
0.69 |
0.31 |
0.02 |
0.21 |
0.39 |
0.01 |
0.15 |
0.08 |
chr11 | 48647822 | 48649993 | chr11:48647822-48649993:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.02 |
0.18 |
0.04 |
0.04 |
0.66 |
0.12 |
0.03 |
0.18 |
0.44 |
0.01 |
0.19 |
0.21 |
chr11 | 48744637 | 48750715 | chr11:48744637-48750715:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.0 |
0.49 |
0.63 |
0.03 |
0.61 |
0.36 |
0.01 |
0.25 |
0.27 |
0.37 |
0.09 |
0.26 |
chr11 | 48847694 | 48853724 | chr11:48847694-48853724:-:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.77 |
0.8 |
0.58 |
0.36 |
0.75 |
0.54 |
0.74 |
0.83 |
0.47 |
0.74 |
0.85 |