Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr15 | 81995166 | 82000000 | chr15:81995166-82000000:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | — | — | — | — | 0.02 |
0.12 |
— | — | 0.06 |
0.16 |
0.08 |
— |
chr15 | 82882881 | 82888919 | chr15:82882881-82888919:-:L1HS:REF | L1HS | REF | full-length | HOMER2 | — | 0.97 |
0.99 |
0.76 |
0.24 |
0.89 |
0.94 |
0.92 |
0.9 |
0.97 |
0.91 |
0.96 |
chr15 | 83225410 | 83225680 | chr15:83225410-83225680:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.12 |
0.85 |
0.81 |
0.58 |
0.9 |
0.77 |
0.04 |
0.83 |
0.93 |
0.8 |
0.83 |
0.88 |
chr15 | 83383651 | 83389616 | chr15:83383651-83389616:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.06 |
0.28 |
0.94 |
0.9 |
0.14 |
0.92 |
0.82 |
0.92 |
0.87 |
0.02 |
0.87 |
0.95 |
chr15 | 83450804 | 83456834 | chr15:83450804-83456834:-:L1HS:REF | L1HS | REF | full-length | SH3GL3 | 0.29 |
0.83 |
0.98 |
0.79 |
0.17 |
0.86 |
0.85 |
0.88 |
0.93 |
0.91 |
0.83 |
0.96 |
chr15 | 84042408 | 84043645 | chr15:84042408-84043645:+:L1P1:REF | L1P1 | REF | 3prime-truncated | ADAMTSL3 | 0.08 |
0.77 |
0.94 |
0.23 |
0.11 |
0.63 |
0.73 |
0.76 |
0.91 |
0.88 |
0.56 |
0.89 |
chr15 | 85433963 | 85439965 | chr15:85433963-85439965:+:L1PA2:REF | L1PA2 | REF | full-length | AKAP13 | 0.06 |
0.8 |
0.99 |
0.99 |
0.11 |
0.87 |
0.45 |
0.9 |
0.33 |
0.32 |
0.84 |
0.99 |
chr15 | 86205831 | 86211977 | chr15:86205831-86211977:-:L1PA6:REF | L1PA6 | REF | full-length | AGBL1 | 0.01 |
0.81 |
0.89 |
0.49 |
0.93 |
0.75 |
0.75 |
0.8 |
0.97 |
0.29 |
0.73 |
0.53 |
chr15 | 86466145 | 86467937 | chr15:86466145-86467937:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | AGBL1 | 0.04 |
0.2 |
0.29 |
0.17 |
0.81 |
0.33 |
0.0 |
0.16 |
0.8 |
0.45 |
0.38 |
0.06 |
chr15 | 86528094 | 86534125 | chr15:86528094-86534125:+:L1PA2:REF | L1PA2 | REF | full-length | AGBL1 | 0.02 |
0.88 |
0.96 |
0.72 |
0.3 |
0.8 |
0.75 |
0.82 |
0.92 |
0.83 |
0.8 |
0.88 |
chr15 | 87001307 | 87006816 | chr15:87001307-87006816:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | AGBL1 | 0.0 |
0.84 |
0.79 |
0.05 |
0.79 |
0.54 |
0.1 |
— | 0.87 |
0.1 |
0.53 |
— |
chr15 | 87229793 | 87235895 | chr15:87229793-87235895:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.94 |
0.69 |
0.11 |
0.85 |
0.53 |
0.02 |
0.56 |
0.92 |
0.07 |
0.49 |
0.29 |
chr15 | 87249763 | 87255874 | chr15:87249763-87255874:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.18 |
0.91 |
0.65 |
0.16 |
0.87 |
0.61 |
0.15 |
0.52 |
0.93 |
0.04 |
0.64 |
0.39 |
chr15 | 87275324 | 87281469 | chr15:87275324-87281469:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.39 |
0.82 |
0.46 |
0.28 |
0.69 |
0.47 |
0.25 |
0.4 |
0.65 |
0.19 |
0.45 |
0.28 |
chr15 | 87463738 | 87469749 | chr15:87463738-87469749:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.24 |
0.85 |
0.93 |
0.48 |
0.24 |
0.65 |
0.63 |
0.63 |
0.87 |
0.42 |
0.5 |
0.56 |
chr15 | 87509891 | 87515920 | chr15:87509891-87515920:+:L1HS:REF | L1HS | REF | full-length | — | 0.6 |
0.98 |
0.9 |
0.62 |
0.2 |
0.84 |
0.67 |
0.86 |
0.91 |
0.53 |
0.83 |
0.83 |
chr15 | 89043903 | 89049907 | chr15:89043903-89049907:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.7 |
0.93 |
0.94 |
0.6 |
0.33 |
0.92 |
0.78 |
0.97 |
0.92 |
0.89 |
0.91 |
0.97 |
chr15 | 89634318 | 89640301 | chr15:89634318-89640301:+:L1PA3:REF | L1PA3 | REF | full-length | KIF7 | 0.88 |
0.94 |
0.91 |
0.94 |
0.86 |
0.91 |
0.93 |
0.95 |
0.89 |
0.9 |
0.91 |
0.93 |
chr15 | 91500665 | 91506649 | chr15:91500665-91506649:+:L1PA3:REF | L1PA3 | REF | full-length | CRAT37 | 0.38 |
0.95 |
0.91 |
0.7 |
0.28 |
0.76 |
0.89 |
0.9 |
0.88 |
0.53 |
0.82 |
0.8 |
chr15 | 93675399 | 93681428 | chr15:93675399-93681428:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.82 |
0.96 |
0.6 |
0.24 |
0.85 |
0.86 |
0.83 |
0.93 |
0.7 |
0.82 |
0.85 |
chr15 | 97265580 | 97271604 | chr15:97265580-97271604:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.77 |
— | 0.62 |
0.15 |
0.73 |
0.61 |
0.86 |
0.8 |
— | 0.73 |
0.86 |
chr15 | 97289925 | 97296313 | chr15:97289925-97296313:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.13 |
0.87 |
— | 0.06 |
0.65 |
0.54 |
0.76 |
0.58 |
0.01 |
0.74 |
0.92 |
chr15 | 97413295 | 97419473 | chr15:97413295-97419473:-:L1PA4:REF | L1PA4 | REF | full-length | LINC02254 | 0.04 |
0.48 |
0.97 |
0.55 |
0.92 |
0.82 |
0.69 |
0.81 |
0.86 |
0.11 |
0.81 |
0.92 |
chr15 | 97432693 | 97438849 | chr15:97432693-97438849:+:L1PA3:REF | L1PA3 | REF | full-length | LINC02254 | 0.01 |
0.68 |
0.93 |
0.47 |
0.9 |
0.63 |
0.43 |
0.72 |
0.95 |
0.91 |
0.67 |
0.78 |
chr15 | 100067771 | 100073922 | chr15:100067771-100073922:+:L1PA4:REF | L1PA4 | REF | full-length | ADAMTS17 | 0.01 |
0.91 |
0.91 |
0.27 |
0.83 |
0.4 |
0.56 |
0.5 |
0.91 |
0.78 |
0.43 |
0.97 |
chr15 | 100365266 | 100371301 | chr15:100365266-100371301:+:L1PA3:REF | L1PA3 | REF | full-length | CERS3-AS1 | 0.02 |
0.66 |
0.79 |
0.64 |
0.91 |
0.67 |
0.42 |
0.67 |
0.89 |
0.57 |
0.56 |
0.82 |
chr15 | 100417071 | 100423096 | chr15:100417071-100423096:+:L1PA2:REF | L1PA2 | REF | full-length | CERS3-AS1 | 0.02 |
0.96 |
0.92 |
— | 0.51 |
0.77 |
0.79 |
0.77 |
0.8 |
0.88 |
0.79 |
0.96 |
chr15 | 101626450 | 101632475 | chr15:101626450-101632475:+:L1PA2:REF | L1PA2 | REF | full-length | TM2D3 | 0.79 |
0.95 |
0.97 |
0.93 |
0.78 |
0.98 |
0.53 |
0.97 |
0.97 |
0.96 |
0.97 |
0.98 |
chr16 | 9584490 | 9590522 | chr16:9584490-9590522:-:L1HS:REF | L1HS | REF | full-length | — | 0.36 |
0.53 |
0.91 |
0.7 |
0.16 |
0.76 |
0.85 |
0.77 |
0.94 |
0.63 |
0.79 |
0.91 |
chr16 | 12070183 | 12076303 | chr16:12070183-12076303:-:L1PA3:REF | L1PA3 | REF | full-length | SNX29 | 0.8 |
0.94 |
0.97 |
0.96 |
0.82 |
0.98 |
0.93 |
0.97 |
0.89 |
0.94 |
0.97 |
0.76 |
chr16 | 12591766 | 12597506 | chr16:12591766-12597506:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | — | — | — | — | 0.82 |
— | 0.96 |
— | — | — | 0.42 |
0.93 |
chr16 | 12603812 | 12609764 | chr16:12603812-12609764:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.22 |
0.75 |
0.86 |
0.03 |
0.71 |
0.62 |
0.97 |
0.58 |
0.73 |
0.12 |
0.39 |
0.73 |
chr16 | 16840517 | 16846556 | chr16:16840517-16846556:-:L1HS:REF | L1HS | REF | full-length | — | — | — | — | 0.55 |
0.4 |
0.86 |
— | 0.85 |
0.91 |
— | 0.87 |
0.91 |
chr16 | 17733165 | 17739300 | chr16:17733165-17739300:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.5 |
0.45 |
0.21 |
0.9 |
0.79 |
0.53 |
0.77 |
0.92 |
0.16 |
0.8 |
0.64 |
chr16 | 21042672 | 21048703 | chr16:21042672-21048703:-:L1PA2:REF | L1PA2 | REF | full-length | DNAH3 | 0.02 |
0.47 |
0.94 |
0.74 |
0.25 |
0.88 |
0.36 |
0.85 |
0.89 |
0.8 |
0.92 |
0.93 |
chr16 | 21329023 | 21335176 | chr16:21329023-21335176:-:L1PA6:REF | L1PA6 | REF | full-length | — | 0.29 |
0.98 |
0.98 |
0.93 |
0.96 |
0.98 |
0.88 |
0.98 |
0.95 |
0.97 |
0.97 |
0.98 |
chr16 | 26092617 | 26098745 | chr16:26092617-26098745:+:L1PA6:REF | L1PA6 | REF | full-length | HS3ST4 | 0.0 |
0.04 |
0.35 |
0.03 |
0.71 |
0.37 |
0.01 |
0.3 |
— | 0.01 |
0.28 |
0.04 |
chr16 | 31278737 | 31284853 | chr16:31278737-31284853:-:L1PA5:REF | L1PA5 | REF | full-length | ITGAM | 0.23 |
0.79 |
0.61 |
0.55 |
0.73 |
0.41 |
0.6 |
0.38 |
— | 0.23 |
0.55 |
0.83 |
chr16 | 31337869 | 31344038 | chr16:31337869-31344038:+:L1PA4:REF | L1PA4 | REF | full-length | ITGAM | 0.02 |
0.81 |
0.7 |
0.08 |
0.79 |
0.45 |
0.13 |
0.48 |
0.64 |
0.59 |
0.33 |
0.65 |
chr16 | 31629877 | 31636018 | chr16:31629877-31636018:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.04 |
0.82 |
0.55 |
0.59 |
0.83 |
0.67 |
0.62 |
0.72 |
0.82 |
0.54 |
0.75 |
0.77 |
chr16 | 31687221 | 31693324 | chr16:31687221-31693324:+:L1PA4:REF | L1PA4 | REF | full-length | CLUHP3 | 0.16 |
0.77 |
0.9 |
0.7 |
0.84 |
0.82 |
0.74 |
0.78 |
0.84 |
0.69 |
0.78 |
0.82 |
chr16 | 31937557 | 31943695 | chr16:31937557-31943695:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.04 |
0.84 |
0.8 |
0.62 |
0.87 |
0.7 |
0.59 |
0.73 |
0.86 |
0.51 |
0.71 |
0.82 |
chr16 | 32587481 | 32588397 | chr16:32587481-32588397:-:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.01 |
0.84 |
0.75 |
0.24 |
0.8 |
0.54 |
0.26 |
0.52 |
0.77 |
0.16 |
0.55 |
0.63 |
chr16 | 32837589 | 32842830 | chr16:32837589-32842830:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.02 |
0.61 |
0.47 |
0.2 |
0.83 |
0.64 |
0.34 |
0.61 |
0.84 |
0.2 |
0.69 |
0.71 |
chr16 | 33952564 | 33958612 | chr16:33952564-33958612:-:L1HS:REF | L1HS | REF | full-length | — | 0.01 |
0.9 |
0.81 |
0.69 |
0.86 |
0.8 |
0.86 |
0.75 |
0.91 |
0.65 |
0.78 |
0.89 |
chr16 | 34018673 | 34024592 | chr16:34018673-34024592:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.49 |
0.37 |
0.37 |
0.79 |
0.63 |
0.57 |
0.65 |
0.83 |
0.23 |
0.67 |
0.68 |
chr16 | 34118474 | 34119193 | chr16:34118474-34119193:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.0 |
0.35 |
0.42 |
0.02 |
0.59 |
0.18 |
0.21 |
0.13 |
— | 0.17 |
0.27 |
0.34 |
chr16 | 35160155 | 35166172 | chr16:35160155-35166172:+:L1PA3:REF | L1PA3 | REF | full-length | UBE2MP1 | 0.01 |
0.24 |
0.61 |
0.46 |
0.8 |
0.65 |
0.56 |
0.64 |
0.87 |
0.4 |
0.6 |
0.82 |
chr16 | 35468696 | 35474693 | chr16:35468696-35474693:+:L1PA3:REF | L1PA3 | REF | full-length | FRG2DP | 0.02 |
0.43 |
0.66 |
0.65 |
0.66 |
0.71 |
0.62 |
0.73 |
0.82 |
0.42 |
0.81 |
0.88 |
chr16 | 35608475 | 35614501 | chr16:35608475-35614501:-:L1HS:REF | L1HS | REF | full-length | — | 0.03 |
0.65 |
0.52 |
— | 0.84 |
0.6 |
— | — | — | 0.28 |
0.67 |
0.59 |