Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr4 | 116405696 | 116411731 | chr4:116405696-116411731:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.08 |
0.78 |
0.89 |
0.82 |
0.11 |
0.76 |
0.55 |
0.82 |
0.96 |
0.8 |
0.8 |
0.98 |
chr4 | 116775043 | 116781055 | chr4:116775043-116781055:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.67 |
0.71 |
0.66 |
0.26 |
0.58 |
0.3 |
0.55 |
0.92 |
0.66 |
0.71 |
0.97 |
chr4 | 117921983 | 117927986 | chr4:117921983-117927986:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.04 |
0.44 |
0.74 |
0.49 |
0.5 |
0.7 |
0.52 |
0.83 |
0.95 |
0.22 |
0.73 |
0.98 |
chr4 | 119061901 | 119068062 | chr4:119061901-119068062:-:L1PA3:REF | L1PA3 | REF | full-length | SYNPO2 | 0.01 |
0.19 |
0.94 |
0.9 |
0.37 |
0.9 |
0.59 |
0.93 |
0.46 |
0.03 |
0.95 |
0.92 |
chr4 | 119073638 | 119079786 | chr4:119073638-119079786:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
— | 0.7 |
— | 0.93 |
0.92 |
0.87 |
— | — | 0.71 |
0.96 |
0.86 |
chr4 | 119948726 | 119954758 | chr4:119948726-119954758:-:L1HS:REF | L1HS | REF | full-length | LINC02502 | 0.02 |
0.96 |
0.98 |
0.8 |
0.06 |
0.96 |
0.82 |
0.96 |
0.96 |
0.97 |
0.98 |
0.98 |
chr4 | 120256079 | 120256778 | chr4:120256079-120256778:-:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | — | 0.37 |
0.91 |
0.58 |
0.08 |
0.84 |
0.35 |
0.89 |
0.47 |
0.01 |
0.91 |
0.97 |
chr4 | 120460346 | 120464352 | chr4:120460346-120464352:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
0.12 |
0.68 |
0.0 |
0.47 |
0.38 |
0.0 |
0.52 |
0.7 |
0.82 |
0.57 |
0.64 |
chr4 | 120508813 | 120515250 | chr4:120508813-120515250:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.01 |
0.11 |
0.75 |
0.32 |
0.81 |
0.73 |
0.03 |
0.71 |
0.95 |
0.9 |
0.81 |
0.98 |
chr4 | 120645591 | 120648485 | chr4:120645591-120648485:-:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.03 |
0.57 |
0.97 |
0.81 |
0.1 |
0.91 |
0.82 |
0.9 |
0.91 |
0.05 |
0.96 |
0.98 |
chr4 | 120943774 | 120948151 | chr4:120943774-120948151:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.01 |
0.78 |
0.95 |
0.22 |
0.78 |
0.67 |
0.16 |
0.64 |
0.88 |
0.86 |
0.57 |
0.96 |
chr4 | 121000000 | 121002150 | chr4:121000000-121002150:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.0 |
0.65 |
0.73 |
0.01 |
0.79 |
0.54 |
0.02 |
0.39 |
0.85 |
0.81 |
0.56 |
0.72 |
chr4 | 121616231 | 121622378 | chr4:121616231-121622378:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.02 |
0.64 |
0.84 |
0.1 |
0.83 |
0.62 |
0.14 |
0.77 |
0.88 |
0.86 |
0.58 |
0.78 |
chr4 | 122492915 | 122499068 | chr4:122492915-122499068:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.67 |
0.92 |
0.87 |
0.65 |
0.92 |
0.85 |
0.72 |
0.88 |
0.95 |
0.81 |
0.93 |
0.97 |
chr4 | 122939633 | 122945796 | chr4:122939633-122945796:-:L1PA4:REF | L1PA4 | REF | full-length | SPATA5 | 0.97 |
0.02 |
0.98 |
0.92 |
0.95 |
0.99 |
0.98 |
0.98 |
0.98 |
0.98 |
0.98 |
0.98 |
chr4 | 123000000 | 123004460 | chr4:123000000-123004460:-:L1P1:REF | L1P1 | REF | 3prime-truncated | SPATA5 | 0.9 |
0.91 |
0.95 |
0.94 |
0.93 |
0.96 |
0.96 |
0.94 |
0.95 |
0.2 |
0.98 |
0.98 |
chr4 | 123330661 | 123337152 | chr4:123330661-123337152:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.64 |
0.97 |
0.77 |
0.76 |
0.86 |
0.78 |
0.91 |
0.88 |
0.93 |
0.81 |
0.95 |
0.93 |
chr4 | 123721384 | 123727541 | chr4:123721384-123727541:+:L1PA3:REF | L1PA3 | REF | full-length | LINC01091 | 0.02 |
0.92 |
0.89 |
0.59 |
0.67 |
0.88 |
0.69 |
0.88 |
0.97 |
0.87 |
0.91 |
0.96 |
chr4 | 124361247 | 124367393 | chr4:124361247-124367393:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.01 |
1.0 |
0.89 |
0.96 |
0.93 |
0.93 |
0.56 |
0.79 |
1.0 |
0.94 |
0.97 |
1.0 |
chr4 | 125150267 | 125152292 | chr4:125150267-125152292:-:L1PA8:REF | L1PA8 | REF | 3prime-truncated | — | 0.0 |
1.0 |
0.6 |
0.91 |
0.93 |
0.59 |
0.02 |
0.85 |
0.89 |
0.67 |
0.9 |
0.96 |
chr4 | 126860856 | 126867000 | chr4:126860856-126867000:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.81 |
0.65 |
0.8 |
0.56 |
0.82 |
0.96 |
0.27 |
0.88 |
0.92 |
0.79 |
0.98 |
0.97 |
chr4 | 126928255 | 126934284 | chr4:126928255-126934284:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.77 |
0.77 |
0.86 |
0.51 |
0.21 |
0.96 |
0.74 |
0.96 |
0.97 |
0.9 |
0.97 |
0.98 |
chr4 | 127020568 | 127026555 | chr4:127020568-127026555:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.59 |
0.87 |
0.85 |
0.77 |
0.66 |
0.96 |
0.84 |
0.94 |
0.97 |
0.89 |
0.98 |
0.96 |
chr4 | 127062560 | 127068603 | chr4:127062560-127068603:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.43 |
0.05 |
0.82 |
0.64 |
0.7 |
0.77 |
0.52 |
0.93 |
0.81 |
0.87 |
0.81 |
0.84 |
chr4 | 127458138 | 127464617 | chr4:127458138-127464617:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.02 |
0.45 |
0.38 |
— | 0.79 |
0.62 |
0.01 |
0.72 |
0.87 |
0.58 |
0.74 |
0.95 |
chr4 | 127472690 | 127478829 | chr4:127472690-127478829:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.21 |
0.79 |
0.72 |
0.59 |
0.91 |
0.8 |
0.36 |
0.87 |
0.96 |
0.88 |
0.9 |
0.98 |
chr4 | 127588930 | 127594962 | chr4:127588930-127594962:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.08 |
0.86 |
0.94 |
0.73 |
0.68 |
0.9 |
0.51 |
0.93 |
0.96 |
0.92 |
0.95 |
0.96 |
chr4 | 127650220 | 127656245 | chr4:127650220-127656245:-:L1PA2:REF | L1PA2 | REF | full-length | INTU | 0.44 |
0.94 |
0.95 |
0.97 |
0.5 |
0.95 |
0.51 |
0.97 |
0.91 |
0.93 |
0.97 |
0.98 |
chr4 | 127676608 | 127682756 | chr4:127676608-127682756:+:L1PA3:REF | L1PA3 | REF | full-length | INTU | 0.88 |
0.96 |
0.98 |
0.99 |
0.95 |
0.98 |
0.98 |
0.98 |
0.98 |
0.98 |
0.97 |
0.98 |
chr4 | 128213789 | 128219796 | chr4:128213789-128219796:+:L1PA2:REF | L1PA2 | REF | full-length | LARP1B | 0.96 |
0.98 |
0.97 |
0.97 |
0.92 |
0.97 |
0.97 |
0.96 |
0.98 |
0.97 |
0.98 |
0.98 |
chr4 | 128895551 | 128901681 | chr4:128895551-128901681:+:L1PA4:REF | L1PA4 | REF | full-length | SCLT1 | 0.94 |
— | 0.95 |
0.97 |
0.87 |
0.97 |
0.97 |
0.97 |
0.96 |
0.94 |
0.98 |
0.97 |
chr4 | 129023547 | 129029691 | chr4:129023547-129029691:+:L1PA4:REF | L1PA4 | REF | full-length | SCLT1 | 0.97 |
0.98 |
0.97 |
0.98 |
0.92 |
0.98 |
0.98 |
0.98 |
0.97 |
0.96 |
0.98 |
0.99 |
chr4 | 129715499 | 129721626 | chr4:129715499-129721626:-:L1PA5:REF | L1PA5 | REF | full-length | LINC02466 | 0.02 |
0.87 |
0.77 |
0.87 |
0.91 |
0.82 |
0.83 |
0.83 |
0.96 |
0.95 |
0.83 |
0.97 |
chr4 | 129853905 | 129859930 | chr4:129853905-129859930:+:L1PA3:REF | L1PA3 | REF | full-length | LINC02465 | 0.02 |
0.88 |
0.63 |
0.23 |
0.1 |
0.72 |
0.36 |
0.83 |
0.94 |
0.55 |
0.77 |
0.91 |
chr4 | 130046202 | 130052342 | chr4:130046202-130052342:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.83 |
0.78 |
0.46 |
0.85 |
0.69 |
0.86 |
0.7 |
0.96 |
0.92 |
0.68 |
0.98 |
chr4 | 132631286 | 132637304 | chr4:132631286-132637304:-:L1PA2:REF | L1PA2 | REF | full-length | LINC01256 | 0.02 |
0.82 |
0.76 |
0.79 |
0.75 |
0.63 |
0.44 |
0.74 |
0.82 |
0.89 |
0.79 |
0.85 |
chr4 | 132944445 | 132950433 | chr4:132944445-132950433:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.0 |
0.97 |
0.82 |
0.84 |
0.85 |
0.82 |
0.82 |
0.85 |
0.96 |
0.92 |
0.84 |
0.96 |
chr4 | 133330359 | 133334605 | chr4:133330359-133334605:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.01 |
— | 0.37 |
0.36 |
0.7 |
0.25 |
0.05 |
0.35 |
— | 0.76 |
0.32 |
0.96 |
chr4 | 133733942 | 133739952 | chr4:133733942-133739952:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.18 |
0.96 |
0.87 |
0.86 |
0.9 |
0.87 |
0.77 |
0.91 |
0.98 |
0.94 |
0.89 |
0.98 |
chr4 | 134207778 | 134213927 | chr4:134207778-134213927:+:L1PA3:REF | L1PA3 | REF | full-length | PABPC4L | 0.23 |
0.96 |
0.82 |
0.85 |
0.91 |
0.93 |
0.28 |
0.86 |
0.97 |
0.96 |
0.79 |
0.98 |
chr4 | 134923018 | 134929206 | chr4:134923018-134929206:-:L1PA6:REF | L1PA6 | REF | full-length | — | 0.03 |
0.92 |
0.64 |
0.7 |
0.9 |
0.81 |
0.23 |
0.54 |
0.92 |
0.95 |
0.57 |
0.99 |
chr4 | 135178140 | 135183747 | chr4:135178140-135183747:-:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.05 |
0.8 |
0.85 |
0.89 |
0.94 |
0.83 |
0.81 |
0.93 |
0.96 |
0.96 |
0.86 |
0.98 |
chr4 | 135447537 | 135453551 | chr4:135447537-135453551:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.96 |
0.88 |
0.89 |
0.05 |
0.82 |
0.77 |
0.86 |
0.94 |
0.94 |
0.84 |
0.99 |
chr4 | 136293494 | 136299546 | chr4:136293494-136299546:-:L1HS:REF | L1HS | REF | full-length | — | 0.03 |
0.95 |
0.93 |
0.94 |
0.15 |
0.83 |
0.9 |
0.84 |
0.96 |
0.95 |
0.88 |
0.94 |
chr4 | 137350580 | 137357055 | chr4:137350580-137357055:+:L1PA8:REF | L1PA8 | REF | full-length | — | 0.0 |
0.35 |
0.79 |
0.3 |
0.89 |
0.89 |
0.02 |
0.92 |
0.93 |
0.84 |
0.82 |
0.95 |
chr4 | 137496278 | 137500000 | chr4:137496278-137500000:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.13 |
0.95 |
0.38 |
0.95 |
0.35 |
0.94 |
0.77 |
0.98 |
0.77 |
0.07 |
0.97 |
0.99 |
chr4 | 138480635 | 138480957 | chr4:138480635-138480957:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.52 |
0.79 |
— | 0.87 |
0.91 |
0.85 |
0.51 |
— | 0.98 |
— | 0.96 |
0.97 |
chr4 | 138881278 | 138887439 | chr4:138881278-138887439:-:L1PA3:REF | L1PA3 | REF | full-length | LOC105377448 | 0.77 |
1.0 |
0.96 |
0.96 |
0.94 |
0.94 |
0.89 |
0.95 |
0.98 |
0.98 |
0.97 |
0.99 |
chr4 | 140413342 | 140419363 | chr4:140413342-140419363:+:L1PA2:REF | L1PA2 | REF | full-length | CLGN | — | 0.91 |
— | 0.87 |
0.26 |
0.81 |
0.92 |
0.87 |
0.96 |
0.97 |
0.96 |
0.96 |
chr4 | 140782680 | 140788847 | chr4:140782680-140788847:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.97 |
0.82 |
0.86 |
0.88 |
0.76 |
0.72 |
0.82 |
0.95 |
0.72 |
0.82 |
0.97 |