Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr5 | 59394720 | 59400744 | chr5:59394720-59400744:+:L1PA3:REF | L1PA3 | REF | full-length | PDE4D | 0.02 |
0.94 |
0.97 |
0.88 |
0.92 |
0.83 |
0.91 |
0.89 |
0.98 |
0.97 |
0.9 |
0.88 |
chr5 | 60044367 | 60050391 | chr5:60044367-60050391:-:L1PA3:REF | L1PA3 | REF | full-length | PDE4D | 0.0 |
0.58 |
0.75 |
0.61 |
0.82 |
0.74 |
0.31 |
— | 0.91 |
0.5 |
0.73 |
0.63 |
chr5 | 60103870 | 60110024 | chr5:60103870-60110024:+:L1PA3:REF | L1PA3 | REF | full-length | PDE4D | 0.04 |
0.35 |
0.84 |
0.53 |
0.82 |
0.81 |
0.5 |
0.65 |
0.97 |
0.34 |
0.63 |
0.76 |
chr5 | 60420575 | 60426695 | chr5:60420575-60426695:+:L1PA6:REF | L1PA6 | REF | full-length | PDE4D | 0.03 |
0.31 |
0.75 |
0.38 |
0.67 |
0.73 |
0.89 |
0.59 |
0.9 |
0.13 |
0.55 |
0.64 |
chr5 | 60570768 | 60576107 | chr5:60570768-60576107:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.64 |
0.98 |
0.98 |
1.0 |
0.97 |
0.91 |
0.98 |
1.0 |
0.96 |
0.91 |
0.96 |
0.84 |
chr5 | 61238874 | 61245001 | chr5:61238874-61245001:+:L1PA4:REF | L1PA4 | REF | full-length | LINC02057 | 0.01 |
0.96 |
0.93 |
0.91 |
0.89 |
0.89 |
0.63 |
0.9 |
0.95 |
0.79 |
0.96 |
0.97 |
chr5 | 62798974 | 62804997 | chr5:62798974-62804997:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.81 |
0.7 |
0.65 |
0.31 |
0.71 |
0.31 |
0.77 |
— | 0.59 |
0.71 |
0.76 |
chr5 | 62817292 | 62823372 | chr5:62817292-62823372:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.9 |
0.91 |
0.78 |
0.83 |
0.81 |
0.85 |
0.83 |
0.95 |
0.8 |
0.77 |
0.94 |
chr5 | 63090181 | 63094755 | chr5:63090181-63094755:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.02 |
0.94 |
0.9 |
0.52 |
0.92 |
0.82 |
0.55 |
0.84 |
0.98 |
0.63 |
0.8 |
0.94 |
chr5 | 63375698 | 63381967 | chr5:63375698-63381967:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.9 |
— | 0.02 |
0.82 |
0.15 |
0.0 |
0.04 |
0.78 |
0.0 |
0.15 |
0.1 |
chr5 | 63581796 | 63587933 | chr5:63581796-63587933:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.04 |
0.87 |
0.55 |
0.47 |
0.9 |
0.68 |
0.38 |
0.67 |
0.93 |
0.38 |
0.69 |
0.67 |
chr5 | 64129091 | 64135124 | chr5:64129091-64135124:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.04 |
0.93 |
0.86 |
0.67 |
0.15 |
0.82 |
0.79 |
0.82 |
0.93 |
0.58 |
0.76 |
0.85 |
chr5 | 64464920 | 64470915 | chr5:64464920-64470915:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
0.65 |
0.59 |
— | 0.73 |
0.45 |
0.5 |
0.38 |
— | 0.3 |
0.56 |
0.27 |
chr5 | 64473756 | 64477100 | chr5:64473756-64477100:+:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.05 |
0.44 |
0.03 |
0.0 |
0.75 |
0.2 |
0.07 |
0.18 |
0.73 |
0.17 |
0.22 |
0.0 |
chr5 | 64477092 | 64483253 | chr5:64477092-64483253:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | 0.66 |
0.53 |
0.44 |
0.77 |
0.56 |
0.49 |
0.57 |
0.8 |
0.4 |
0.59 |
0.33 |
chr5 | 64709034 | 64715065 | chr5:64709034-64715065:-:L1PA2:REF | L1PA2 | REF | full-length | SHISAL2B | 0.73 |
0.96 |
0.97 |
0.87 |
0.06 |
0.94 |
0.39 |
0.98 |
0.85 |
0.66 |
0.96 |
0.98 |
chr5 | 65164017 | 65170048 | chr5:65164017-65170048:+:L1PA2:REF | L1PA2 | REF | full-length | ADAMTS6 | 0.62 |
0.68 |
0.98 |
0.84 |
0.9 |
0.97 |
0.97 |
0.96 |
0.96 |
0.95 |
0.98 |
0.98 |
chr5 | 65370262 | 65376273 | chr5:65370262-65376273:+:L1PA3:REF | L1PA3 | REF | full-length | ADAMTS6 | 0.72 |
0.95 |
0.97 |
0.83 |
0.54 |
0.99 |
0.96 |
0.99 |
0.98 |
0.94 |
0.98 |
0.94 |
chr5 | 66382748 | 66388765 | chr5:66382748-66388765:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
— | — | 0.78 |
— | 0.8 |
0.5 |
— | — | — | 0.76 |
— |
chr5 | 66750283 | 66754219 | chr5:66750283-66754219:+:L1HS:REF | L1HS | REF | 3prime-truncated | MAST4 | 0.01 |
0.97 |
0.97 |
0.58 |
0.89 |
0.79 |
0.6 |
0.78 |
0.97 |
0.93 |
0.78 |
0.82 |
chr5 | 67598336 | 67604471 | chr5:67598336-67604471:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.98 |
0.7 |
0.05 |
0.9 |
0.79 |
0.96 |
0.52 |
0.95 |
0.68 |
0.59 |
0.91 |
chr5 | 67703676 | 67708855 | chr5:67703676-67708855:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.04 |
0.98 |
0.82 |
0.23 |
0.91 |
0.89 |
0.72 |
0.72 |
0.94 |
0.81 |
0.65 |
0.94 |
chr5 | 67736897 | 67742931 | chr5:67736897-67742931:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.17 |
0.89 |
0.91 |
0.56 |
0.84 |
0.93 |
0.91 |
0.78 |
0.98 |
0.94 |
0.8 |
0.97 |
chr5 | 67757565 | 67763694 | chr5:67757565-67763694:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.15 |
0.97 |
0.81 |
0.44 |
0.87 |
0.88 |
0.96 |
0.73 |
0.91 |
0.86 |
0.69 |
0.97 |
chr5 | 67780007 | 67786186 | chr5:67780007-67786186:+:L1PA3:REF | L1PA3 | REF | full-length | LOC101928858 | 0.04 |
0.79 |
0.74 |
0.47 |
0.68 |
0.85 |
0.89 |
0.79 |
0.73 |
0.1 |
0.7 |
0.92 |
chr5 | 67817944 | 67823959 | chr5:67817944-67823959:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
0.89 |
0.75 |
0.47 |
0.06 |
0.95 |
0.98 |
0.81 |
0.8 |
0.77 |
0.65 |
0.83 |
chr5 | 67889604 | 67895628 | chr5:67889604-67895628:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.94 |
0.93 |
0.67 |
0.12 |
0.94 |
0.89 |
0.76 |
0.96 |
0.46 |
0.85 |
0.95 |
chr5 | 68691640 | 68697661 | chr5:68691640-68697661:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.57 |
0.86 |
0.83 |
0.38 |
0.87 |
0.93 |
0.74 |
0.83 |
0.93 |
0.77 |
0.64 |
0.92 |
chr5 | 71604580 | 71610593 | chr5:71604580-71610593:-:L1PA2:REF | L1PA2 | REF | full-length | MCCC2 | 0.97 |
0.94 |
0.98 |
0.97 |
0.92 |
0.98 |
0.96 |
0.95 |
0.98 |
0.98 |
0.98 |
0.98 |
chr5 | 72577317 | 72583458 | chr5:72577317-72583458:+:L1PA4:REF | L1PA4 | REF | full-length | LINC02056 | 0.88 |
0.96 |
0.9 |
0.92 |
0.92 |
0.92 |
0.57 |
0.96 |
0.95 |
0.95 |
0.96 |
0.97 |
chr5 | 73874410 | 73880569 | chr5:73874410-73880569:-:L1PA3:REF | L1PA3 | REF | full-length | ARHGEF28 | — | 0.98 |
0.97 |
0.85 |
0.91 |
0.96 |
0.98 |
0.96 |
0.95 |
0.94 |
0.98 |
0.98 |
chr5 | 74706305 | 74712443 | chr5:74706305-74712443:+:L1PA3:REF | L1PA3 | REF | full-length | HEXB | 0.89 |
0.88 |
0.92 |
0.93 |
0.94 |
0.89 |
0.89 |
0.89 |
0.9 |
0.91 |
0.94 |
0.98 |
chr5 | 75129665 | 75129959 | chr5:75129665-75129959:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | ANKRD31 | 0.0 |
0.93 |
0.85 |
0.47 |
0.92 |
0.71 |
0.53 |
0.62 |
0.93 |
0.73 |
0.7 |
0.96 |
chr5 | 75175748 | 75182091 | chr5:75175748-75182091:+:L1PA4:REF | L1PA4 | REF | full-length | ANKRD31 | 0.09 |
0.96 |
0.93 |
0.92 |
0.91 |
0.9 |
0.83 |
0.86 |
0.96 |
0.86 |
0.86 |
0.94 |
chr5 | 75642235 | 75648286 | chr5:75642235-75648286:+:L1PA2:REF | L1PA2 | REF | full-length | ANKDD1B | 0.86 |
0.93 |
0.96 |
0.88 |
0.45 |
0.97 |
0.95 |
0.96 |
0.95 |
0.96 |
0.98 |
0.98 |
chr5 | 75695698 | 75701728 | chr5:75695698-75701728:+:L1PA3:REF | L1PA3 | REF | full-length | POC5 | 0.45 |
0.33 |
0.97 |
0.98 |
0.68 |
0.97 |
0.96 |
0.98 |
0.91 |
0.32 |
0.97 |
0.97 |
chr5 | 75896065 | 75902234 | chr5:75896065-75902234:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.76 |
0.64 |
0.21 |
0.84 |
0.56 |
— | 0.59 |
0.91 |
0.32 |
0.56 |
0.65 |
chr5 | 76032249 | 76038204 | chr5:76032249-76038204:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.12 |
0.03 |
0.32 |
0.17 |
0.15 |
0.06 |
0.27 |
0.26 |
0.02 |
0.5 |
0.81 |
chr5 | 77474802 | 77480837 | chr5:77474802-77480837:+:L1PA3:REF | L1PA3 | REF | full-length | WDR41 | 0.24 |
0.56 |
0.87 |
0.82 |
0.63 |
0.76 |
0.8 |
0.74 |
0.87 |
0.71 |
0.89 |
0.89 |
chr5 | 78118215 | 78124355 | chr5:78118215-78124355:+:L1PA4:REF | L1PA4 | REF | full-length | AP3B1 | 0.98 |
0.98 |
0.99 |
0.98 |
0.95 |
0.99 |
0.99 |
0.99 |
0.97 |
0.98 |
0.98 |
0.98 |
chr5 | 78452185 | 78458210 | chr5:78452185-78458210:-:L1PA2:REF | L1PA2 | REF | full-length | SCAMP1 | 0.94 |
0.97 |
0.97 |
0.92 |
0.17 |
0.95 |
0.98 |
0.91 |
0.88 |
0.12 |
0.97 |
0.98 |
chr5 | 78681963 | 78688078 | chr5:78681963-78688078:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.84 |
0.95 |
— | 0.95 |
0.92 |
0.91 |
0.88 |
0.94 |
0.92 |
0.95 |
0.95 |
0.97 |
chr5 | 78848085 | 78854204 | chr5:78848085-78854204:-:L1PA3:REF | L1PA3 | REF | full-length | ARSB | 0.15 |
0.97 |
0.97 |
0.97 |
0.93 |
0.95 |
0.95 |
0.95 |
0.96 |
0.94 |
0.91 |
— |
chr5 | 78866805 | 78872828 | chr5:78866805-78872828:+:L1PA2:REF | L1PA2 | REF | full-length | ARSB | 0.56 |
0.98 |
0.98 |
0.92 |
0.43 |
0.96 |
0.98 |
0.97 |
0.98 |
0.96 |
0.93 |
0.99 |
chr5 | 78939282 | 78945425 | chr5:78939282-78945425:-:L1PA4:REF | L1PA4 | REF | full-length | ARSB | 0.29 |
0.93 |
0.96 |
0.91 |
0.92 |
0.97 |
0.98 |
0.98 |
0.97 |
0.93 |
0.97 |
0.97 |
chr5 | 79778884 | 79784938 | chr5:79778884-79784938:-:L1HS:REF | L1HS | REF | full-length | CMYA5 | 0.28 |
0.64 |
0.97 |
0.58 |
0.06 |
0.71 |
0.48 |
0.65 |
0.44 |
0.68 |
0.84 |
0.98 |
chr5 | 79902294 | 79908448 | chr5:79902294-79908448:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
— | 0.88 |
0.44 |
0.78 |
0.62 |
0.68 |
0.8 |
— | 0.75 |
0.83 |
0.93 |
chr5 | 79910994 | 79917108 | chr5:79910994-79917108:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.04 |
— | 0.91 |
0.03 |
0.7 |
0.16 |
0.03 |
0.12 |
— | 0.74 |
0.25 |
— |
chr5 | 80391144 | 80397265 | chr5:80391144-80397265:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.52 |
0.97 |
0.95 |
0.94 |
0.91 |
0.78 |
0.88 |
0.91 |
0.97 |
0.95 |
0.81 |
0.97 |
chr5 | 81028683 | 81034148 | chr5:81028683-81034148:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | RASGRF2 | 0.02 |
— | — | 0.47 |
— | 0.62 |
— | — | — | 0.89 |
0.98 |
0.9 |