Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr13 | 38837794 | 38840413 | chr13:38837794-38840413:-:L1P3:REF | L1P3 | REF | 3prime-truncated | FREM2 | — | — | — | — | — | 0.46 |
0.1 |
— | — | — | 0.52 |
0.11 |
chr13 | 39000817 | 39006875 | chr13:39000817-39006875:-:L1PA2:REF | L1PA2 | REF | full-length | PROSER1 | 0.95 |
0.96 |
0.97 |
0.97 |
0.14 |
0.96 |
0.33 |
0.97 |
0.86 |
0.94 |
0.97 |
0.98 |
chr13 | 40356290 | 40362321 | chr13:40356290-40362321:+:L1PA2:REF | L1PA2 | REF | full-length | LINC00598 | 0.03 |
0.96 |
0.97 |
0.9 |
0.65 |
0.88 |
0.92 |
0.79 |
0.8 |
0.92 |
0.71 |
0.96 |
chr13 | 40711139 | 40713316 | chr13:40711139-40713316:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.34 |
0.97 |
0.94 |
0.74 |
0.91 |
0.91 |
0.89 |
0.92 |
0.89 |
0.93 |
0.93 |
0.97 |
chr13 | 40734919 | 40740945 | chr13:40734919-40740945:+:L1PA2:REF | L1PA2 | REF | full-length | MRPS31 | 0.95 |
0.98 |
0.97 |
0.91 |
0.34 |
0.88 |
0.9 |
0.97 |
0.69 |
0.97 |
0.98 |
0.96 |
chr13 | 40828819 | 40834834 | chr13:40828819-40834834:+:L1PA2:REF | L1PA2 | REF | full-length | TPTE2P5 | 0.53 |
0.96 |
0.97 |
0.83 |
0.79 |
0.95 |
0.96 |
0.95 |
0.97 |
0.95 |
0.95 |
0.9 |
chr13 | 40864571 | 40870598 | chr13:40864571-40870598:-:L1PA3:REF | L1PA3 | REF | full-length | TPTE2P5 | 0.05 |
0.96 |
0.96 |
— | 0.55 |
0.66 |
0.71 |
— | 0.67 |
0.93 |
0.97 |
0.86 |
chr13 | 41042308 | 41048414 | chr13:41042308-41048414:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.96 |
0.99 |
0.94 |
1.0 |
0.95 |
0.98 |
0.94 |
0.96 |
0.89 |
0.91 |
0.94 |
0.92 |
chr13 | 41474356 | 41480738 | chr13:41474356-41480738:-:L1PA7:REF | L1PA7 | REF | full-length | RGCC | 0.07 |
0.98 |
0.82 |
0.57 |
0.88 |
0.83 |
0.53 |
0.88 |
0.97 |
0.78 |
0.94 |
0.96 |
chr13 | 42424880 | 42430912 | chr13:42424880-42430912:+:L1PA2:REF | L1PA2 | REF | full-length | LINC02341 | 0.07 |
0.88 |
0.91 |
0.79 |
0.21 |
0.8 |
0.82 |
0.84 |
0.87 |
0.83 |
0.83 |
0.9 |
chr13 | 43971705 | 43976214 | chr13:43971705-43976214:-:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.03 |
0.95 |
0.89 |
0.89 |
0.3 |
0.86 |
0.91 |
0.96 |
0.91 |
0.94 |
0.92 |
0.97 |
chr13 | 45635171 | 45641629 | chr13:45635171-45641629:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.88 |
0.91 |
0.33 |
0.87 |
0.57 |
0.11 |
0.41 |
0.94 |
0.67 |
0.68 |
0.96 |
chr13 | 45645030 | 45651067 | chr13:45645030-45651067:+:L1PA2:REF | L1PA2 | REF | full-length | — | — | 0.91 |
0.91 |
— | 0.34 |
0.84 |
0.91 |
— | — | 0.4 |
0.82 |
0.9 |
chr13 | 45664064 | 45670213 | chr13:45664064-45670213:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | 0.54 |
0.95 |
— | 0.59 |
0.88 |
0.4 |
— | — | 0.31 |
0.81 |
0.95 |
chr13 | 47712138 | 47718308 | chr13:47712138-47718308:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.27 |
0.69 |
0.93 |
0.81 |
0.69 |
0.44 |
0.65 |
0.87 |
0.29 |
0.86 |
0.44 |
chr13 | 47734791 | 47740890 | chr13:47734791-47740890:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.0 |
0.04 |
0.06 |
0.75 |
0.55 |
0.54 |
0.22 |
0.42 |
0.86 |
0.03 |
0.67 |
0.08 |
chr13 | 47781888 | 47787912 | chr13:47781888-47787912:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.91 |
0.95 |
0.86 |
0.37 |
0.87 |
0.91 |
0.88 |
0.94 |
0.83 |
0.92 |
0.95 |
chr13 | 48416129 | 48422515 | chr13:48416129-48422515:+:L1PA7:REF | L1PA7 | REF | full-length | RB1 | 0.96 |
0.99 |
0.99 |
1.0 |
0.93 |
0.97 |
0.98 |
0.99 |
0.98 |
0.95 |
0.99 |
0.99 |
chr13 | 48465555 | 48471566 | chr13:48465555-48471566:+:L1HS:REF | L1HS | REF | full-length | RB1 | 0.97 |
0.98 |
0.98 |
0.99 |
0.48 |
0.99 |
0.98 |
0.97 |
0.96 |
0.98 |
0.99 |
0.98 |
chr13 | 49152513 | 49158535 | chr13:49152513-49158535:-:L1PA2:REF | L1PA2 | REF | full-length | FNDC3A | 0.87 |
0.91 |
0.94 |
0.98 |
0.78 |
0.95 |
0.91 |
0.91 |
0.85 |
0.94 |
0.92 |
0.91 |
chr13 | 49879091 | 49880687 | chr13:49879091-49880687:+:L1PA8:REF | L1PA8 | REF | 3prime-truncated | CTAGE10P | — | — | 0.02 |
— | — | 0.0 |
0.01 |
0.03 |
— | 0.0 |
0.04 |
0.07 |
chr13 | 50180295 | 50186330 | chr13:50180295-50186330:-:L1PA2:REF | L1PA2 | REF | full-length | DLEU1 | 0.0 |
0.01 |
0.98 |
0.93 |
0.19 |
0.93 |
0.01 |
0.96 |
0.78 |
0.01 |
0.98 |
0.02 |
chr13 | 50982054 | 50988070 | chr13:50982054-50988070:+:L1PA2:REF | L1PA2 | REF | full-length | GUCY1B2 | 0.82 |
0.92 |
0.97 |
0.87 |
0.15 |
0.91 |
0.91 |
0.85 |
0.85 |
0.94 |
0.95 |
0.97 |
chr13 | 51078923 | 51080846 | chr13:51078923-51080846:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | C13orf42 | — | 0.13 |
0.81 |
— | 0.39 |
0.82 |
0.67 |
0.8 |
— | 0.34 |
0.84 |
0.2 |
chr13 | 51509717 | 51515838 | chr13:51509717-51515838:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.63 |
0.41 |
0.96 |
0.8 |
0.91 |
0.82 |
0.89 |
0.97 |
0.97 |
0.89 |
0.95 |
0.97 |
chr13 | 51690196 | 51696329 | chr13:51690196-51696329:-:L1PA3:REF | L1PA3 | REF | full-length | WDFY2 | 0.87 |
0.21 |
0.98 |
0.88 |
0.93 |
0.99 |
0.97 |
0.99 |
0.99 |
0.94 |
0.97 |
0.93 |
chr13 | 52254319 | 52258039 | chr13:52254319-52258039:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.73 |
0.92 |
0.96 |
0.79 |
0.93 |
0.85 |
0.94 |
0.88 |
0.96 |
0.93 |
0.85 |
0.98 |
chr13 | 52269640 | 52275659 | chr13:52269640-52275659:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.79 |
0.97 |
0.95 |
0.86 |
0.13 |
0.86 |
0.89 |
0.89 |
0.54 |
0.92 |
0.9 |
0.98 |
chr13 | 52548432 | 52552151 | chr13:52548432-52552151:-:L1P1:REF | L1P1 | REF | 3prime-truncated | TPTE2P3 | 0.78 |
0.16 |
0.97 |
0.93 |
0.93 |
0.87 |
0.91 |
0.92 |
0.97 |
0.95 |
0.88 |
0.98 |
chr13 | 54218991 | 54225025 | chr13:54218991-54225025:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.03 |
— | 0.87 |
0.36 |
— | 0.74 |
0.78 |
0.88 |
— | 0.94 |
0.74 |
0.88 |
chr13 | 54572234 | 54573121 | chr13:54572234-54573121:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.06 |
0.7 |
0.88 |
0.68 |
0.4 |
0.68 |
0.79 |
0.83 |
0.26 |
0.18 |
0.83 |
0.76 |
chr13 | 55272543 | 55278710 | chr13:55272543-55278710:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
— | 0.17 |
0.04 |
0.73 |
0.2 |
0.02 |
0.22 |
— | 0.58 |
0.13 |
0.01 |
chr13 | 56762844 | 56769351 | chr13:56762844-56769351:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.05 |
0.5 |
0.11 |
0.04 |
0.79 |
0.27 |
0.07 |
0.27 |
0.84 |
0.26 |
0.22 |
0.05 |
chr13 | 57229644 | 57236064 | chr13:57229644-57236064:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.26 |
0.33 |
0.0 |
0.78 |
0.26 |
0.0 |
0.11 |
0.87 |
0.54 |
0.08 |
0.13 |
chr13 | 58350399 | 58352698 | chr13:58350399-58352698:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.02 |
0.96 |
0.87 |
0.4 |
0.91 |
0.71 |
0.78 |
0.86 |
0.96 |
0.94 |
0.71 |
0.84 |
chr13 | 58672617 | 58678643 | chr13:58672617-58678643:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.96 |
0.87 |
0.84 |
0.6 |
0.8 |
0.77 |
0.87 |
0.96 |
0.92 |
0.86 |
0.87 |
chr13 | 60245895 | 60252051 | chr13:60245895-60252051:-:L1PA3:REF | L1PA3 | REF | full-length | LINC00434 | — | — | 0.82 |
— | 0.81 |
0.8 |
0.81 |
— | — | 0.84 |
0.81 |
0.91 |
chr13 | 60709752 | 60715784 | chr13:60709752-60715784:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.33 |
0.73 |
0.16 |
0.76 |
0.49 |
0.46 |
0.53 |
0.92 |
0.8 |
0.57 |
0.37 |
chr13 | 61627110 | 61629440 | chr13:61627110-61629440:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | — | — | 0.68 |
0.14 |
— | 0.43 |
0.54 |
0.52 |
— | — | 0.56 |
— |
chr13 | 64211031 | 64217178 | chr13:64211031-64217178:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.05 |
0.61 |
0.4 |
0.32 |
0.85 |
0.44 |
0.07 |
0.7 |
0.67 |
— | 0.82 |
0.95 |
chr13 | 66253762 | 66259788 | chr13:66253762-66259788:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.33 |
0.96 |
0.96 |
0.89 |
0.94 |
0.9 |
0.77 |
0.93 |
0.98 |
0.96 |
0.97 |
0.97 |
chr13 | 66737482 | 66743507 | chr13:66737482-66743507:+:L1PA2:REF | L1PA2 | REF | full-length | PCDH9 | — | — | 0.96 |
0.95 |
0.67 |
0.84 |
0.87 |
0.91 |
— | 0.96 |
0.97 |
0.96 |
chr13 | 67452274 | 67456207 | chr13:67452274-67456207:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.16 |
0.82 |
0.77 |
0.26 |
0.8 |
0.13 |
0.05 |
0.52 |
0.85 |
0.82 |
0.48 |
0.92 |
chr13 | 67685594 | 67686288 | chr13:67685594-67686288:-:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.33 |
0.98 |
0.91 |
0.8 |
0.14 |
0.81 |
0.82 |
0.91 |
0.94 |
0.96 |
0.91 |
0.98 |
chr13 | 69477866 | 69483990 | chr13:69477866-69483990:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.02 |
— | 0.4 |
0.28 |
— | 0.33 |
0.15 |
0.69 |
— | 0.57 |
0.41 |
— |
chr13 | 69782179 | 69784882 | chr13:69782179-69784882:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | KLHL1 | 0.09 |
0.77 |
0.75 |
0.36 |
0.9 |
0.64 |
0.68 |
0.71 |
0.96 |
0.92 |
0.77 |
0.9 |
chr13 | 72265482 | 72271624 | chr13:72265482-72271624:-:L1PA4:REF | L1PA4 | REF | full-length | — | — | 0.78 |
0.75 |
— | — | 0.72 |
0.9 |
0.71 |
0.96 |
0.91 |
— | 0.89 |
chr13 | 72610246 | 72616287 | chr13:72610246-72616287:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.64 |
0.91 |
0.51 |
0.44 |
0.77 |
0.72 |
0.84 |
0.96 |
0.97 |
0.85 |
0.88 |
chr13 | 74235944 | 74241970 | chr13:74235944-74241970:-:L1PA3:REF | L1PA3 | REF | full-length | LINC00402 | 0.02 |
0.95 |
0.98 |
0.72 |
0.2 |
0.94 |
0.93 |
0.98 |
0.99 |
0.98 |
0.99 |
0.98 |
chr13 | 74426326 | 74432354 | chr13:74426326-74432354:+:L1HS:REF | L1HS | REF | full-length | LINC00381 | 0.01 |
0.93 |
0.89 |
0.8 |
0.42 |
0.8 |
0.8 |
0.9 |
0.9 |
0.88 |
0.93 |
0.86 |