Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr15 | 101880277 | 101886693 | chr15:101880277-101886693:-:L1PA7:REF | L1PA7 | REF | full-length | — | — | — | 0.84 |
— | — | 0.44 |
0.58 |
0.9 |
— | 0.74 |
0.89 |
0.88 |
chr16 | 9584490 | 9590522 | chr16:9584490-9590522:-:L1HS:REF | L1HS | REF | full-length | — | 0.36 |
0.53 |
0.91 |
0.7 |
0.16 |
0.76 |
0.85 |
0.77 |
0.94 |
0.63 |
0.79 |
0.91 |
chr16 | 12070183 | 12076303 | chr16:12070183-12076303:-:L1PA3:REF | L1PA3 | REF | full-length | SNX29 | 0.8 |
0.94 |
0.97 |
0.96 |
0.82 |
0.98 |
0.93 |
0.97 |
0.89 |
0.94 |
0.97 |
0.76 |
chr16 | 12603812 | 12609764 | chr16:12603812-12609764:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.22 |
0.75 |
0.86 |
0.03 |
0.71 |
0.62 |
0.97 |
0.58 |
0.73 |
0.12 |
0.39 |
0.73 |
chr16 | 16840517 | 16846556 | chr16:16840517-16846556:-:L1HS:REF | L1HS | REF | full-length | — | — | — | — | 0.55 |
0.4 |
0.86 |
— | 0.85 |
0.91 |
— | 0.87 |
0.91 |
chr16 | 17733165 | 17739300 | chr16:17733165-17739300:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.5 |
0.45 |
0.21 |
0.9 |
0.79 |
0.53 |
0.77 |
0.92 |
0.16 |
0.8 |
0.64 |
chr16 | 21042672 | 21048703 | chr16:21042672-21048703:-:L1PA2:REF | L1PA2 | REF | full-length | DNAH3 | 0.02 |
0.47 |
0.94 |
0.74 |
0.25 |
0.88 |
0.36 |
0.85 |
0.89 |
0.8 |
0.92 |
0.93 |
chr16 | 21329023 | 21335176 | chr16:21329023-21335176:-:L1PA6:REF | L1PA6 | REF | full-length | — | 0.29 |
0.98 |
0.98 |
0.93 |
0.96 |
0.98 |
0.88 |
0.98 |
0.95 |
0.97 |
0.97 |
0.98 |
chr16 | 26092617 | 26098745 | chr16:26092617-26098745:+:L1PA6:REF | L1PA6 | REF | full-length | HS3ST4 | 0.0 |
0.04 |
0.35 |
0.03 |
0.71 |
0.37 |
0.01 |
0.3 |
— | 0.01 |
0.28 |
0.04 |
chr16 | 31278737 | 31284853 | chr16:31278737-31284853:-:L1PA5:REF | L1PA5 | REF | full-length | ITGAM | 0.23 |
0.79 |
0.61 |
0.55 |
0.73 |
0.41 |
0.6 |
0.38 |
— | 0.23 |
0.55 |
0.83 |
chr16 | 31337869 | 31344038 | chr16:31337869-31344038:+:L1PA4:REF | L1PA4 | REF | full-length | ITGAM | 0.02 |
0.81 |
0.7 |
0.08 |
0.79 |
0.45 |
0.13 |
0.48 |
0.64 |
0.59 |
0.33 |
0.65 |
chr16 | 31629877 | 31636018 | chr16:31629877-31636018:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.04 |
0.82 |
0.55 |
0.59 |
0.83 |
0.67 |
0.62 |
0.72 |
0.82 |
0.54 |
0.75 |
0.77 |
chr16 | 31687221 | 31693324 | chr16:31687221-31693324:+:L1PA4:REF | L1PA4 | REF | full-length | CLUHP3 | 0.16 |
0.77 |
0.9 |
0.7 |
0.84 |
0.82 |
0.74 |
0.78 |
0.84 |
0.69 |
0.78 |
0.82 |
chr16 | 31937557 | 31943695 | chr16:31937557-31943695:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.04 |
0.84 |
0.8 |
0.62 |
0.87 |
0.7 |
0.59 |
0.73 |
0.86 |
0.51 |
0.71 |
0.82 |
chr16 | 32587481 | 32588397 | chr16:32587481-32588397:-:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.01 |
0.84 |
0.75 |
0.24 |
0.8 |
0.54 |
0.26 |
0.52 |
0.77 |
0.16 |
0.55 |
0.63 |
chr16 | 32837589 | 32842830 | chr16:32837589-32842830:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.02 |
0.61 |
0.47 |
0.2 |
0.83 |
0.64 |
0.34 |
0.61 |
0.84 |
0.2 |
0.69 |
0.71 |
chr16 | 33952564 | 33958612 | chr16:33952564-33958612:-:L1HS:REF | L1HS | REF | full-length | — | 0.01 |
0.9 |
0.81 |
0.69 |
0.86 |
0.8 |
0.86 |
0.75 |
0.91 |
0.65 |
0.78 |
0.89 |
chr16 | 34018673 | 34024592 | chr16:34018673-34024592:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.49 |
0.37 |
0.37 |
0.79 |
0.63 |
0.57 |
0.65 |
0.83 |
0.23 |
0.67 |
0.68 |
chr16 | 34118474 | 34119193 | chr16:34118474-34119193:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.0 |
0.35 |
0.42 |
0.02 |
0.59 |
0.18 |
0.21 |
0.13 |
— | 0.17 |
0.27 |
0.34 |
chr16 | 35160155 | 35166172 | chr16:35160155-35166172:+:L1PA3:REF | L1PA3 | REF | full-length | UBE2MP1 | 0.01 |
0.24 |
0.61 |
0.46 |
0.8 |
0.65 |
0.56 |
0.64 |
0.87 |
0.4 |
0.6 |
0.82 |
chr16 | 35468696 | 35474693 | chr16:35468696-35474693:+:L1PA3:REF | L1PA3 | REF | full-length | FRG2DP | 0.02 |
0.43 |
0.66 |
0.65 |
0.66 |
0.71 |
0.62 |
0.73 |
0.82 |
0.42 |
0.81 |
0.88 |
chr16 | 35608475 | 35614501 | chr16:35608475-35614501:-:L1HS:REF | L1HS | REF | full-length | — | 0.03 |
0.65 |
0.52 |
— | 0.84 |
0.6 |
— | — | — | 0.28 |
0.67 |
0.59 |
chr16 | 35715796 | 35721963 | chr16:35715796-35721963:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.02 |
0.69 |
0.46 |
0.28 |
0.77 |
0.53 |
0.22 |
0.4 |
0.74 |
0.02 |
0.46 |
0.74 |
chr16 | 46449411 | 46455427 | chr16:46449411-46455427:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.13 |
0.56 |
0.6 |
0.07 |
0.62 |
0.69 |
0.66 |
0.88 |
0.39 |
0.63 |
0.81 |
chr16 | 46489860 | 46496028 | chr16:46489860-46496028:+:L1PA4:REF | L1PA4 | REF | full-length | ANKRD26P1 | 0.01 |
0.04 |
0.29 |
0.46 |
0.66 |
0.55 |
0.31 |
— | 0.74 |
0.17 |
0.6 |
0.64 |
chr16 | 46535347 | 46541495 | chr16:46535347-46541495:+:L1PA3:REF | L1PA3 | REF | full-length | ANKRD26P1 | — | — | — | — | 0.83 |
0.71 |
0.5 |
— | — | 0.5 |
0.81 |
0.81 |
chr16 | 47182757 | 47188783 | chr16:47182757-47188783:+:L1PA3:REF | L1PA3 | REF | full-length | ITFG1 | 0.96 |
0.97 |
0.97 |
0.97 |
0.94 |
0.98 |
0.97 |
0.99 |
0.98 |
0.95 |
0.98 |
0.98 |
chr16 | 47437710 | 47443907 | chr16:47437710-47443907:+:L1PA4:REF | L1PA4 | REF | full-length | ITFG1 | 0.97 |
0.96 |
0.97 |
0.98 |
0.91 |
0.97 |
0.98 |
0.96 |
0.96 |
0.95 |
0.98 |
0.97 |
chr16 | 47541007 | 47547243 | chr16:47541007-47547243:-:L1PA6:REF | L1PA6 | REF | full-length | PHKB | 0.96 |
0.99 |
0.97 |
0.97 |
0.87 |
0.97 |
0.98 |
0.97 |
0.99 |
0.96 |
0.98 |
0.98 |
chr16 | 47677770 | 47683912 | chr16:47677770-47683912:-:L1PA4:REF | L1PA4 | REF | full-length | PHKB | 0.94 |
— | 0.93 |
0.99 |
0.92 |
0.97 |
0.97 |
0.98 |
— | 0.97 |
0.98 |
0.98 |
chr16 | 47807975 | 47814106 | chr16:47807975-47814106:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.96 |
0.64 |
0.44 |
0.89 |
0.56 |
0.48 |
0.65 |
0.91 |
0.1 |
0.65 |
0.78 |
chr16 | 47909897 | 47916004 | chr16:47909897-47916004:+:L1PA5:REF | L1PA5 | REF | full-length | LINC02133 | 0.0 |
0.24 |
0.32 |
0.11 |
0.87 |
0.36 |
0.04 |
0.4 |
0.9 |
0.02 |
0.35 |
0.4 |
chr16 | 48015465 | 48021489 | chr16:48015465-48021489:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.05 |
0.98 |
0.95 |
0.75 |
0.19 |
0.87 |
0.89 |
0.84 |
0.92 |
0.86 |
0.88 |
0.92 |
chr16 | 48666607 | 48668775 | chr16:48666607-48668775:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.05 |
0.31 |
0.09 |
0.11 |
— | 0.04 |
0.06 |
0.0 |
— | 0.0 |
0.11 |
0.08 |
chr16 | 48768571 | 48774603 | chr16:48768571-48774603:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.79 |
0.82 |
0.62 |
0.78 |
0.71 |
0.86 |
0.82 |
0.93 |
0.5 |
0.82 |
0.87 |
chr16 | 51329809 | 51335954 | chr16:51329809-51335954:+:L1PA5:REF | L1PA5 | REF | full-length | MIR548AI | 0.01 |
0.05 |
0.49 |
0.2 |
0.47 |
0.45 |
0.39 |
0.46 |
0.48 |
0.42 |
0.46 |
0.26 |
chr16 | 52333409 | 52339534 | chr16:52333409-52339534:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.94 |
0.94 |
0.02 |
0.93 |
0.49 |
0.95 |
0.52 |
0.96 |
0.22 |
0.24 |
0.32 |
chr16 | 52973416 | 52976027 | chr16:52973416-52976027:-:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.0 |
0.8 |
0.95 |
0.19 |
0.85 |
0.66 |
0.72 |
0.64 |
0.93 |
0.36 |
0.69 |
0.83 |
chr16 | 53344431 | 53350517 | chr16:53344431-53350517:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.03 |
— | 0.94 |
0.79 |
— | 0.58 |
0.67 |
0.75 |
— | 0.73 |
0.76 |
— |
chr16 | 53396916 | 53402916 | chr16:53396916-53402916:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.24 |
0.51 |
0.95 |
0.86 |
0.93 |
0.85 |
0.85 |
0.88 |
0.97 |
0.87 |
0.89 |
0.98 |
chr16 | 54042096 | 54048145 | chr16:54042096-54048145:+:L1HS:REF | L1HS | REF | full-length | FTO | 0.78 |
0.94 |
0.9 |
0.75 |
0.64 |
0.95 |
0.91 |
0.99 |
0.84 |
0.9 |
0.86 |
0.94 |
chr16 | 55615451 | 55615846 | chr16:55615451-55615846:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.07 |
0.94 |
0.9 |
0.13 |
0.86 |
0.71 |
0.88 |
0.68 |
0.95 |
0.81 |
0.73 |
0.95 |
chr16 | 56154514 | 56160662 | chr16:56154514-56160662:+:L1PA3:REF | L1PA3 | REF | full-length | LOC283856 | 0.08 |
0.9 |
0.85 |
0.61 |
0.9 |
0.78 |
0.69 |
0.73 |
0.96 |
— | 0.68 |
0.85 |
chr16 | 58779887 | 58785996 | chr16:58779887-58785996:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.2 |
0.92 |
0.37 |
0.16 |
0.89 |
0.56 |
0.42 |
0.54 |
0.93 |
0.15 |
0.58 |
0.56 |
chr16 | 58873142 | 58879266 | chr16:58873142-58879266:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.3 |
0.39 |
0.35 |
0.25 |
0.87 |
0.41 |
0.19 |
0.31 |
0.86 |
0.14 |
0.37 |
0.39 |
chr16 | 58918644 | 58921104 | chr16:58918644-58921104:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
0.27 |
0.48 |
0.0 |
0.89 |
0.38 |
0.06 |
0.22 |
0.84 |
0.02 |
0.21 |
0.09 |
chr16 | 58991471 | 58993354 | chr16:58991471-58993354:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.0 |
0.2 |
0.54 |
0.1 |
0.42 |
0.57 |
0.29 |
0.59 |
0.85 |
0.02 |
0.51 |
0.17 |
chr16 | 59363201 | 59365889 | chr16:59363201-59365889:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.35 |
0.7 |
0.59 |
0.64 |
0.92 |
0.84 |
0.67 |
0.84 |
0.94 |
0.42 |
0.86 |
0.8 |
chr16 | 59559294 | 59565319 | chr16:59559294-59565319:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.79 |
0.88 |
0.62 |
0.88 |
0.94 |
0.78 |
0.97 |
0.98 |
0.62 |
0.98 |
0.85 |
chr16 | 59809317 | 59815504 | chr16:59809317-59815504:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.01 |
0.39 |
0.33 |
0.11 |
0.89 |
0.68 |
0.09 |
0.55 |
0.94 |
0.08 |
0.54 |
0.42 |