Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chrX | 12537884 | 12539638 | chrX:12537884-12539638:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | FRMPD4 | 0.03 |
— | 0.4 |
0.09 |
0.69 |
0.47 |
0.02 |
0.32 |
0.75 |
0.14 |
0.71 |
0.09 |
chrX | 13132317 | 13138466 | chrX:13132317-13138466:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.79 |
0.89 |
0.96 |
0.97 |
0.94 |
0.86 |
0.93 |
0.9 |
0.91 |
0.89 |
0.99 |
0.88 |
chrX | 14103920 | 14109975 | chrX:14103920-14109975:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.85 |
0.81 |
0.55 |
0.75 |
0.87 |
0.77 |
0.8 |
0.95 |
0.58 |
0.82 |
0.89 |
chrX | 14683910 | 14688939 | chrX:14683910-14688939:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | GLRA2 | 0.01 |
0.35 |
0.5 |
0.37 |
0.91 |
0.82 |
0.85 |
0.68 |
0.96 |
0.61 |
0.84 |
0.97 |
chrX | 14809194 | 14815329 | chrX:14809194-14815329:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.03 |
0.75 |
0.75 |
0.79 |
0.92 |
0.96 |
0.92 |
0.84 |
— | 0.78 |
0.97 |
0.98 |
chrX | 14969001 | 14975122 | chrX:14969001-14975122:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.35 |
0.46 |
0.31 |
0.81 |
0.87 |
0.06 |
0.66 |
— | 0.27 |
0.74 |
— |
chrX | 16230649 | 16236856 | chrX:16230649-16236856:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.07 |
0.86 |
0.91 |
0.5 |
0.93 |
0.93 |
0.89 |
0.87 |
0.96 |
0.64 |
0.97 |
0.96 |
chrX | 16360076 | 16366218 | chrX:16360076-16366218:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.1 |
0.86 |
0.86 |
0.29 |
0.94 |
0.91 |
0.86 |
0.91 |
— | 0.38 |
0.93 |
0.93 |
chrX | 16497356 | 16500000 | chrX:16497356-16500000:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.02 |
0.68 |
0.87 |
0.37 |
0.91 |
0.92 |
0.94 |
0.82 |
0.99 |
0.39 |
0.98 |
0.98 |
chrX | 17342483 | 17348512 | chrX:17342483-17348512:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.01 |
0.84 |
— | 0.08 |
0.88 |
0.86 |
0.72 |
0.77 |
0.23 |
0.91 |
0.08 |
chrX | 17781376 | 17787389 | chrX:17781376-17787389:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.19 |
0.76 |
0.53 |
0.18 |
0.89 |
0.3 |
0.72 |
0.69 |
0.21 |
0.93 |
0.9 |
chrX | 18104292 | 18104924 | chrX:18104292-18104924:+:L1PA2:REF | L1PA2 | REF | 3prime-truncated | LINC01456 | 0.08 |
0.79 |
0.87 |
0.83 |
0.04 |
0.87 |
0.84 |
0.67 |
0.26 |
0.24 |
0.88 |
0.9 |
chrX | 19142668 | 19148700 | chrX:19142668-19148700:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.13 |
0.88 |
0.84 |
0.73 |
0.06 |
0.86 |
0.87 |
0.69 |
0.83 |
0.74 |
0.86 |
0.96 |
chrX | 19273369 | 19279507 | chrX:19273369-19279507:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.02 |
0.65 |
0.54 |
0.49 |
0.87 |
0.66 |
0.7 |
0.71 |
0.97 |
0.52 |
0.72 |
0.95 |
chrX | 19940253 | 19946296 | chrX:19940253-19946296:-:L1PA2:REF | L1PA2 | REF | full-length | BCLAF3 | 0.92 |
0.94 |
0.88 |
0.98 |
0.1 |
0.98 |
0.97 |
0.67 |
0.87 |
0.87 |
0.99 |
0.98 |
chrX | 20845443 | 20851624 | chrX:20845443-20851624:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.04 |
0.28 |
0.07 |
0.86 |
0.38 |
0.39 |
0.37 |
0.94 |
0.03 |
0.43 |
0.08 |
chrX | 21339463 | 21345718 | chrX:21339463-21345718:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.49 |
0.78 |
0.66 |
0.92 |
0.82 |
0.73 |
0.79 |
0.96 |
0.55 |
0.83 |
0.89 |
chrX | 23238516 | 23244575 | chrX:23238516-23244575:+:L1HS:REF | L1HS | REF | full-length | PTCHD1-AS | 0.01 |
0.81 |
0.74 |
0.65 |
0.94 |
0.81 |
0.67 |
0.81 |
0.93 |
0.68 |
0.82 |
0.85 |
chrX | 23357661 | 23363791 | chrX:23357661-23363791:-:L1PA6:REF | L1PA6 | REF | full-length | PTCHD1 | 0.0 |
0.67 |
0.65 |
0.29 |
0.93 |
0.67 |
0.39 |
0.65 |
0.95 |
0.53 |
0.6 |
0.39 |
chrX | 23458349 | 23459578 | chrX:23458349-23459578:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.03 |
0.87 |
0.83 |
0.57 |
0.97 |
0.79 |
0.6 |
0.78 |
0.94 |
0.59 |
0.77 |
0.82 |
chrX | 23645908 | 23651833 | chrX:23645908-23651833:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.06 |
0.77 |
0.82 |
0.73 |
0.96 |
0.87 |
— | 0.61 |
0.94 |
0.69 |
0.92 |
0.95 |
chrX | 25404200 | 25404749 | chrX:25404200-25404749:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.01 |
0.66 |
0.72 |
0.28 |
0.93 |
0.78 |
0.42 |
0.73 |
0.97 |
0.48 |
0.74 |
0.95 |
chrX | 25771296 | 25772426 | chrX:25771296-25772426:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.01 |
0.78 |
0.71 |
0.64 |
0.91 |
0.79 |
0.28 |
0.75 |
0.96 |
— | — | 0.97 |
chrX | 26314417 | 26320446 | chrX:26314417-26320446:-:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.76 |
0.72 |
0.73 |
0.13 |
0.82 |
0.73 |
0.71 |
0.94 |
0.69 |
0.82 |
0.97 |
chrX | 27196690 | 27198202 | chrX:27196690-27198202:+:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.01 |
0.17 |
0.28 |
0.09 |
0.92 |
0.48 |
0.15 |
0.44 |
0.74 |
0.34 |
0.52 |
0.97 |
chrX | 27758585 | 27764733 | chrX:27758585-27764733:+:L1PA5:REF | L1PA5 | REF | full-length | DCAF8L2 | 0.04 |
— | 0.36 |
0.19 |
0.87 |
0.42 |
0.05 |
0.57 |
0.66 |
0.25 |
0.68 |
0.96 |
chrX | 27801040 | 27801409 | chrX:27801040-27801409:+:L1P1:REF | L1P1 | REF | 3prime-truncated | MAGEB10 | 0.01 |
0.66 |
0.73 |
0.51 |
0.9 |
0.76 |
0.6 |
0.81 |
0.88 |
0.6 |
0.94 |
0.99 |
chrX | 28362090 | 28368221 | chrX:28362090-28368221:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.66 |
0.69 |
0.52 |
0.93 |
0.67 |
0.63 |
0.79 |
0.95 |
0.31 |
0.93 |
0.98 |
chrX | 29981730 | 29987885 | chrX:29981730-29987885:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.78 |
0.68 |
0.67 |
0.9 |
0.8 |
0.62 |
0.68 |
0.93 |
0.63 |
0.95 |
0.89 |
chrX | 31077316 | 31083463 | chrX:31077316-31083463:-:L1PA4:REF | L1PA4 | REF | full-length | FTHL17 | 0.02 |
0.66 |
0.68 |
0.77 |
0.89 |
0.81 |
0.86 |
0.8 |
0.95 |
0.71 |
0.81 |
0.82 |
chrX | 32730898 | 32736929 | chrX:32730898-32736929:+:L1PA3:REF | L1PA3 | REF | full-length | DMD | 0.02 |
0.52 |
0.73 |
0.72 |
0.94 |
0.78 |
0.79 |
0.84 |
0.96 |
0.6 |
0.85 |
0.85 |
chrX | 34249185 | 34253913 | chrX:34249185-34253913:-:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.03 |
0.73 |
0.64 |
0.75 |
0.25 |
0.76 |
0.86 |
0.72 |
0.94 |
0.52 |
0.83 |
0.88 |
chrX | 34457626 | 34458682 | chrX:34457626-34458682:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.02 |
0.56 |
0.76 |
0.82 |
0.87 |
0.75 |
0.46 |
0.8 |
0.94 |
0.52 |
0.79 |
0.82 |
chrX | 36415143 | 36419001 | chrX:36415143-36419001:-:L1PA6:REF | L1PA6 | REF | full-length | LOC101928627 | 0.02 |
0.4 |
0.43 |
0.6 |
0.83 |
0.36 |
0.01 |
0.38 |
0.95 |
0.17 |
0.45 |
0.27 |
chrX | 36465194 | 36471217 | chrX:36465194-36471217:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.72 |
0.57 |
0.84 |
0.14 |
0.69 |
0.7 |
0.71 |
0.96 |
0.46 |
0.78 |
0.83 |
chrX | 37560508 | 37560949 | chrX:37560508-37560949:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | — | 0.49 |
0.63 |
0.56 |
0.93 |
0.49 |
0.31 |
0.69 |
— | 0.63 |
0.73 |
0.97 |
chrX | 37628446 | 37634592 | chrX:37628446-37634592:-:L1PA3:REF | L1PA3 | REF | full-length | LANCL3 | 0.66 |
0.84 |
0.85 |
0.85 |
0.92 |
0.78 |
0.85 |
0.9 |
0.98 |
0.82 |
0.84 |
0.97 |
chrX | 42004299 | 42010329 | chrX:42004299-42010329:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.91 |
0.82 |
0.41 |
0.91 |
0.86 |
0.64 |
0.82 |
0.95 |
0.68 |
0.79 |
0.97 |
chrX | 42202163 | 42208183 | chrX:42202163-42208183:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.94 |
0.8 |
0.78 |
0.11 |
0.87 |
0.88 |
0.79 |
0.92 |
0.6 |
0.89 |
0.98 |
chrX | 42424860 | 42430890 | chrX:42424860-42430890:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.8 |
0.78 |
0.52 |
0.39 |
0.85 |
0.92 |
0.74 |
0.89 |
0.65 |
0.8 |
0.98 |
chrX | 42589683 | 42595809 | chrX:42589683-42595809:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | 0.7 |
0.8 |
— | 0.93 |
0.8 |
0.63 |
— | — | 0.59 |
0.76 |
— |
chrX | 42650741 | 42656856 | chrX:42650741-42656856:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.02 |
0.87 |
0.82 |
0.7 |
0.85 |
0.77 |
0.74 |
0.81 |
0.94 |
0.51 |
0.8 |
0.98 |
chrX | 42810743 | 42816960 | chrX:42810743-42816960:-:L1PA6:REF | L1PA6 | REF | full-length | — | 0.01 |
0.78 |
0.51 |
0.23 |
0.85 |
0.62 |
0.48 |
0.68 |
— | 0.27 |
0.57 |
0.97 |
chrX | 42888370 | 42894396 | chrX:42888370-42894396:+:L1PA2:REF | L1PA2 | REF | full-length | — | — | — | 0.73 |
0.83 |
0.2 |
0.88 |
0.84 |
0.46 |
0.97 |
0.41 |
0.86 |
0.99 |
chrX | 43670449 | 43676596 | chrX:43670449-43676596:-:L1PA3:REF | L1PA3 | REF | full-length | MAOA | 0.04 |
0.84 |
0.72 |
0.8 |
0.88 |
0.73 |
0.83 |
0.76 |
0.85 |
0.7 |
0.78 |
0.85 |
chrX | 43840491 | 43841034 | chrX:43840491-43841034:+:L1P3:REF | L1P3 | REF | 3prime-truncated | MAOB | 0.0 |
0.4 |
0.57 |
0.65 |
0.83 |
0.54 |
0.84 |
0.42 |
0.85 |
0.37 |
0.46 |
0.91 |
chrX | 46000000 | 46004481 | chrX:46000000-46004481:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.01 |
0.68 |
0.75 |
0.61 |
0.9 |
0.79 |
0.63 |
0.7 |
0.96 |
0.51 |
0.86 |
0.98 |
chrX | 46054884 | 46058449 | chrX:46054884-46058449:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.02 |
0.55 |
0.17 |
0.16 |
0.89 |
0.3 |
0.33 |
0.36 |
0.98 |
0.04 |
0.36 |
0.98 |
chrX | 46074554 | 46080736 | chrX:46074554-46080736:-:L1PA6:REF | L1PA6 | REF | full-length | — | 0.0 |
0.43 |
0.24 |
0.14 |
0.9 |
0.36 |
0.22 |
0.28 |
0.9 |
0.05 |
0.33 |
0.92 |
chrX | 46484679 | 46486516 | chrX:46484679-46486516:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.18 |
0.76 |
0.52 |
0.97 |
0.79 |
0.93 |
0.92 |
0.69 |
0.96 |
0.55 |
0.96 |
0.95 |