| Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrY | 14833585 | 14833877 | chrY:14833585-14833877:-:L1P1:REF | L1P1 | REF | 3prime-truncated | NLGN4Y | — | — | — | — | 0.93 |
0.96 |
0.96 |
— | 0.92 |
— | 0.98 |
— |
| chrY | 14861128 | 14867059 | chrY:14861128-14867059:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | — | — | — | — | 0.9 |
0.8 |
0.03 |
— | 0.97 |
— | 0.91 |
— |
| chrY | 14952755 | 14958959 | chrY:14952755-14958959:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | 0.91 |
0.55 |
0.25 |
— | 0.91 |
— | 0.63 |
— |
| chrY | 15153009 | 15159054 | chrY:15153009-15159054:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | 0.9 |
0.51 |
0.9 |
— | 0.93 |
— | 0.74 |
— |
| chrY | 15426061 | 15432072 | chrY:15426061-15432072:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | 0.91 |
0.98 |
0.89 |
— | 0.92 |
— | 0.98 |
— |
| chrY | 15530102 | 15532391 | chrY:15530102-15532391:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | — | — | — | — | 0.88 |
0.9 |
0.04 |
— | — | — | 0.95 |
— |
| chrY | 15722321 | 15728344 | chrY:15722321-15728344:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | 0.88 |
0.63 |
0.03 |
— | 0.95 |
— | 0.78 |
— |
| chrY | 15742349 | 15748477 | chrY:15742349-15748477:-:L1PA5:REF | L1PA5 | REF | full-length | — | — | — | — | — | 0.88 |
0.29 |
0.18 |
— | 0.76 |
— | 0.89 |
— |
| chrY | 16427017 | 16433089 | chrY:16427017-16433089:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | 0.75 |
0.2 |
0.02 |
— | 0.88 |
— | 0.25 |
— |
| chrY | 16747134 | 16753486 | chrY:16747134-16753486:-:L1PA7:REF | L1PA7 | REF | full-length | — | — | — | — | — | 0.7 |
0.36 |
0.3 |
— | 0.89 |
— | 0.22 |
— |
| chrY | 16985042 | 16991073 | chrY:16985042-16991073:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | 0.8 |
0.49 |
0.09 |
— | 0.93 |
— | 0.57 |
— |
| chrY | 17060920 | 17066963 | chrY:17060920-17066963:-:L1PA2:REF | L1PA2 | REF | full-length | — | — | — | — | — | 0.2 |
0.75 |
0.66 |
— | 0.95 |
— | 0.93 |
— |
| chrY | 17311632 | 17317724 | chrY:17311632-17317724:+:L1PA4:REF | L1PA4 | REF | full-length | — | — | — | — | — | 0.75 |
0.26 |
0.02 |
— | 0.81 |
— | 0.78 |
— |
| chrY | 17708355 | 17714504 | chrY:17708355-17714504:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | 0.73 |
0.49 |
0.16 |
— | 0.69 |
— | 0.51 |
— |
| chrY | 18893898 | 18899933 | chrY:18893898-18899933:+:L1PA3:REF | L1PA3 | REF | full-length | TTTY14 | — | — | — | — | 0.9 |
0.97 |
0.81 |
— | 0.88 |
— | 0.97 |
— |
| chrY | 19034631 | 19038436 | chrY:19034631-19038436:+:L1HS:REF | L1HS | REF | 3prime-truncated | TTTY14 | — | — | — | — | 0.79 |
0.8 |
0.71 |
— | 0.15 |
— | 0.36 |
— |
| chrY | 19230409 | 19232952 | chrY:19230409-19232952:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | — | — | — | — | 0.84 |
0.23 |
0.0 |
— | 0.76 |
— | 0.32 |
— |
| chrY | 19373283 | 19379312 | chrY:19373283-19379312:-:L1PA2:REF | L1PA2 | REF | full-length | — | — | — | — | — | 0.14 |
0.73 |
0.94 |
— | — | — | 0.81 |
— |
| chrY | 19413656 | 19419018 | chrY:19413656-19419018:-:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | — | — | — | — | 0.92 |
0.63 |
0.5 |
— | 0.89 |
— | 0.66 |
— |
| chrY | 19631690 | 19635004 | chrY:19631690-19635004:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | — | — | — | — | 0.65 |
0.15 |
0.45 |
— | 0.45 |
— | 0.35 |
— |
| chrY | 19750332 | 19754110 | chrY:19750332-19754110:-:L1PA12:REF | L1PA12 | REF | 3prime-truncated | KDM5D | — | — | — | — | 0.82 |
0.86 |
0.09 |
— | 0.89 |
— | 0.87 |
— |
| chrY | 20030942 | 20037076 | chrY:20030942-20037076:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | 0.72 |
0.53 |
0.72 |
— | 0.83 |
— | 0.28 |
— |
| chrY | 20042979 | 20043855 | chrY:20042979-20043855:-:L1P3:REF | L1P3 | REF | 3prime-truncated | — | — | — | — | — | 0.54 |
0.33 |
0.38 |
— | 0.84 |
— | 0.07 |
— |
| chrY | 20380425 | 20386697 | chrY:20380425-20386697:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | 0.68 |
0.34 |
0.5 |
— | 0.62 |
— | 0.22 |
— |
| chrY | 20457288 | 20463400 | chrY:20457288-20463400:-:L1PA5:REF | L1PA5 | REF | full-length | TTTY10 | — | — | — | — | 0.73 |
0.5 |
0.49 |
— | 0.55 |
— | 0.41 |
— |
| chrY | 20817541 | 20818479 | chrY:20817541-20818479:+:L1P2:REF | L1P2 | REF | 3prime-truncated | — | — | — | — | — | 0.74 |
0.11 |
0.0 |
— | 0.5 |
— | 0.14 |
— |
| chrY | 20822282 | 20827017 | chrY:20822282-20827017:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | — | — | — | — | — | 0.73 |
— | — | — | — | — | — |
| chrY | 20843711 | 20848827 | chrY:20843711-20848827:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | — | — | — | — | 0.82 |
0.21 |
0.01 |
— | 0.5 |
— | 0.29 |
— |
| chrY | 20867003 | 20868297 | chrY:20867003-20868297:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | — | — | — | — | 0.37 |
0.0 |
0.0 |
— | 0.06 |
— | 0.01 |
— |
| chrY | 20919912 | 20926008 | chrY:20919912-20926008:-:L1PA4:REF | L1PA4 | REF | full-length | — | — | — | — | — | 0.57 |
0.35 |
0.0 |
— | 0.62 |
— | 0.49 |
— |
| chrY | 20944133 | 20950163 | chrY:20944133-20950163:-:L1PA2:REF | L1PA2 | REF | full-length | — | — | — | — | — | 0.82 |
0.41 |
0.43 |
— | 0.78 |
— | 0.47 |
— |
| chrY | 21063741 | 21069758 | chrY:21063741-21069758:+:L1PA2:REF | L1PA2 | REF | full-length | — | — | — | — | — | 0.81 |
0.34 |
0.23 |
— | 0.65 |
— | 0.12 |
— |
| chrY | 21123535 | 21129642 | chrY:21123535-21129642:-:L1PA5:REF | L1PA5 | REF | full-length | — | — | — | — | — | 0.62 |
0.19 |
0.0 |
— | 0.49 |
— | 0.19 |
— |
| chrY | 22339612 | 22345645 | chrY:22339612-22345645:-:L1PA2:REF | L1PA2 | REF | full-length | RBMY1F | — | — | — | — | 0.63 |
0.82 |
0.71 |
— | 0.89 |
— | 0.81 |
— |
| chrY | 26601787 | 26607911 | chrY:26601787-26607911:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | 0.75 |
0.28 |
0.0 |
— | 0.3 |
— | 0.08 |
— |