Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr10 | 67189566 | 67189568 | chr10:67189566-67189568:+:L1HS:NONREF | L1HS | KNR | — | CTNNA3 | 0.01 |
— | — | — | 0.01 |
0.68 |
— | — | 0.83 |
— | — | — |
chr10 | 67230665 | 67236674 | chr10:67230665-67236674:+:L1PA3:REF | L1PA3 | REF | full-length | CTNNA3 | 0.01 |
0.11 |
0.1 |
0.65 |
0.14 |
0.29 |
0.36 |
0.28 |
0.43 |
0.19 |
0.16 |
0.98 |
chr10 | 67387044 | 67393069 | chr10:67387044-67393069:+:L1PA3:REF | L1PA3 | REF | full-length | CTNNA3 | 0.02 |
0.67 |
0.4 |
0.74 |
0.08 |
0.17 |
0.16 |
0.19 |
0.26 |
0.02 |
0.1 |
0.99 |
chr10 | 67558505 | 67564644 | chr10:67558505-67564644:+:L1PA5:REF | L1PA5 | REF | full-length | CTNNA3 | 0.01 |
0.93 |
0.9 |
0.74 |
0.89 |
0.82 |
0.51 |
0.9 |
0.97 |
0.79 |
0.8 |
0.99 |
chr10 | 73323334 | 73329500 | chr10:73323334-73329500:+:L1PA3:REF | L1PA3 | REF | full-length | CFAP70 | 0.8 |
0.94 |
0.96 |
0.93 |
0.92 |
0.87 |
0.81 |
0.89 |
0.89 |
0.91 |
0.9 |
0.97 |
chr10 | 74216880 | 74223021 | chr10:74216880-74223021:+:L1PA3:REF | L1PA3 | REF | full-length | ADK | 0.98 |
0.95 |
0.98 |
0.98 |
0.93 |
0.96 |
0.96 |
0.98 |
0.97 |
0.95 |
0.98 |
0.99 |
chr10 | 74571874 | 74574153 | chr10:74571874-74574153:-:L1P1:REF | L1P1 | REF | 3prime-truncated | ADK | 0.98 |
0.97 |
0.98 |
0.97 |
0.91 |
0.98 |
0.97 |
0.98 |
0.97 |
0.98 |
0.98 |
0.98 |
chr10 | 75558530 | 75564686 | chr10:75558530-75564686:-:L1PA3:REF | L1PA3 | REF | full-length | LRMDA | 0.15 |
0.96 |
0.94 |
0.9 |
0.89 |
0.86 |
0.99 |
0.83 |
0.97 |
0.92 |
0.91 |
0.9 |
chr10 | 75575579 | 75581586 | chr10:75575579-75581586:+:L1P2:REF | L1P2 | REF | 3prime-truncated | LRMDA | 0.02 |
0.76 |
0.67 |
0.42 |
0.95 |
0.34 |
0.97 |
0.35 |
0.86 |
0.62 |
0.55 |
0.54 |
chr10 | 76142708 | 76148837 | chr10:76142708-76148837:-:L1PA4:REF | L1PA4 | REF | full-length | LRMDA | 0.01 |
0.71 |
0.88 |
0.4 |
0.85 |
0.94 |
0.97 |
0.83 |
0.91 |
0.92 |
0.87 |
0.74 |
chr10 | 76608512 | 76614828 | chr10:76608512-76614828:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.34 |
0.61 |
0.11 |
0.85 |
0.7 |
0.39 |
0.82 |
0.91 |
0.28 |
0.8 |
0.52 |
chr10 | 76846210 | 76852331 | chr10:76846210-76852331:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.75 |
0.88 |
0.32 |
0.93 |
0.85 |
0.47 |
0.89 |
0.95 |
0.76 |
0.93 |
0.82 |
chr10 | 78088450 | 78094479 | chr10:78088450-78094479:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.08 |
0.95 |
0.97 |
0.63 |
0.35 |
0.83 |
0.81 |
0.78 |
0.9 |
0.92 |
0.76 |
0.94 |
chr10 | 78676493 | 78682651 | chr10:78676493-78682651:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.93 |
0.91 |
0.58 |
0.91 |
0.93 |
0.88 |
0.93 |
0.97 |
0.7 |
0.9 |
0.89 |
chr10 | 79956165 | 79962310 | chr10:79956165-79962310:+:L1PA4:REF | L1PA4 | REF | full-length | SFTPD | 0.0 |
0.85 |
0.69 |
0.38 |
0.87 |
0.64 |
0.43 |
0.61 |
0.77 |
0.47 |
0.63 |
0.44 |
chr10 | 80722509 | 80728544 | chr10:80722509-80728544:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.23 |
0.96 |
0.77 |
0.47 |
0.81 |
0.73 |
0.72 |
0.74 |
0.94 |
0.65 |
0.72 |
0.8 |
chr10 | 80881468 | 80887604 | chr10:80881468-80887604:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.97 |
0.19 |
0.02 |
0.92 |
0.35 |
0.25 |
0.57 |
0.7 |
0.03 |
0.46 |
0.24 |
chr10 | 81441665 | 81441975 | chr10:81441665-81441975:-:L1HS:REF | L1HS | REF | 3prime-truncated | — | — | 0.96 |
0.8 |
0.66 |
0.87 |
0.8 |
0.71 |
0.83 |
0.96 |
0.5 |
0.73 |
0.87 |
chr10 | 81709615 | 81715642 | chr10:81709615-81715642:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.94 |
0.79 |
0.51 |
0.75 |
0.81 |
0.73 |
0.85 |
0.97 |
0.44 |
0.77 |
0.85 |
chr10 | 82344062 | 82350086 | chr10:82344062-82350086:-:L1PA2:REF | L1PA2 | REF | full-length | NRG3 | 0.05 |
0.57 |
0.96 |
0.82 |
0.09 |
0.9 |
0.89 |
0.84 |
0.93 |
0.54 |
0.82 |
0.88 |
chr10 | 83088894 | 83095334 | chr10:83088894-83095334:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.96 |
0.49 |
0.48 |
0.64 |
0.39 |
0.02 |
0.41 |
0.69 |
0.03 |
0.24 |
0.11 |
chr10 | 83294270 | 83294493 | chr10:83294270-83294493:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.01 |
0.35 |
0.58 |
0.81 |
0.94 |
0.55 |
0.15 |
0.6 |
0.87 |
0.03 |
0.51 |
0.46 |
chr10 | 83741800 | 83747326 | chr10:83741800-83747326:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.01 |
0.82 |
0.12 |
0.96 |
0.85 |
0.22 |
0.02 |
0.17 |
0.82 |
0.0 |
0.08 |
0.04 |
chr10 | 83781056 | 83787087 | chr10:83781056-83787087:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.95 |
0.84 |
0.95 |
0.14 |
0.81 |
0.66 |
0.81 |
0.9 |
0.6 |
0.74 |
0.84 |
chr10 | 84279967 | 84286006 | chr10:84279967-84286006:+:L1PA2:REF | L1PA2 | REF | full-length | LINC00858 | 0.01 |
0.42 |
0.91 |
0.85 |
0.05 |
0.79 |
0.12 |
0.88 |
0.65 |
0.01 |
0.77 |
0.72 |
chr10 | 84756878 | 84762878 | chr10:84756878-84762878:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.69 |
0.96 |
0.63 |
0.27 |
0.83 |
0.92 |
0.8 |
0.93 |
0.49 |
0.81 |
0.92 |
chr10 | 84773056 | 84779262 | chr10:84773056-84779262:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.62 |
0.86 |
0.75 |
0.78 |
0.78 |
0.66 |
0.82 |
0.95 |
0.49 |
0.76 |
0.94 |
chr10 | 84971957 | 84978109 | chr10:84971957-84978109:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.03 |
0.07 |
0.04 |
0.92 |
0.13 |
0.02 |
0.17 |
0.93 |
0.04 |
0.16 |
0.08 |
chr10 | 85274403 | 85280845 | chr10:85274403-85280845:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.89 |
0.51 |
0.01 |
0.72 |
0.26 |
0.14 |
0.1 |
0.92 |
0.06 |
0.08 |
0.05 |
chr10 | 85355506 | 85361538 | chr10:85355506-85361538:+:L1HS:REF | L1HS | REF | full-length | — | 0.05 |
0.44 |
0.94 |
0.79 |
0.07 |
0.8 |
0.82 |
0.83 |
0.9 |
0.68 |
0.8 |
0.87 |
chr10 | 85769340 | 85775490 | chr10:85769340-85775490:+:L1PA3:REF | L1PA3 | REF | full-length | GRID1 | — | 0.34 |
0.96 |
0.57 |
0.9 |
0.79 |
0.5 |
0.81 |
0.97 |
0.75 |
0.78 |
0.96 |
chr10 | 85876618 | 85882780 | chr10:85876618-85882780:+:L1PA4:REF | L1PA4 | REF | full-length | GRID1 | 0.02 |
0.22 |
0.85 |
0.48 |
0.84 |
0.71 |
0.61 |
0.69 |
0.89 |
0.62 |
0.67 |
0.96 |
chr10 | 88443339 | 88446691 | chr10:88443339-88446691:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | RNLS | 0.02 |
0.84 |
0.95 |
0.96 |
0.94 |
0.91 |
0.43 |
0.93 |
0.94 |
0.95 |
0.94 |
0.98 |
chr10 | 88628462 | 88634738 | chr10:88628462-88634738:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.73 |
0.95 |
0.97 |
0.88 |
0.86 |
0.37 |
0.9 |
0.97 |
0.85 |
0.92 |
0.97 |
chr10 | 90153450 | 90159478 | chr10:90153450-90159478:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
0.87 |
0.86 |
0.43 |
0.81 |
0.89 |
0.56 |
0.72 |
0.92 |
0.72 |
0.93 |
0.98 |
chr10 | 90250613 | 90256635 | chr10:90250613-90256635:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.89 |
0.95 |
0.65 |
0.21 |
0.92 |
0.63 |
0.87 |
0.96 |
0.77 |
0.94 |
0.98 |
chr10 | 90369650 | 90371954 | chr10:90369650-90371954:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.02 |
0.93 |
0.94 |
0.02 |
0.88 |
0.77 |
0.02 |
0.9 |
0.96 |
0.59 |
0.95 |
0.98 |
chr10 | 91188085 | 91188342 | chr10:91188085-91188342:+:L1P1:REF | L1P1 | REF | 3prime-truncated | PCGF5 | 0.9 |
0.98 |
0.97 |
0.98 |
0.91 |
0.97 |
0.98 |
0.96 |
0.98 |
0.96 |
0.98 |
0.98 |
chr10 | 91324304 | 91328005 | chr10:91324304-91328005:-:L1P1:REF | L1P1 | REF | 3prime-truncated | HECTD2-AS1 | 0.09 |
0.97 |
0.93 |
0.73 |
0.92 |
0.86 |
0.81 |
0.93 |
0.98 |
0.81 |
0.91 |
0.97 |
chr10 | 91503263 | 91509287 | chr10:91503263-91509287:+:L1PA2:REF | L1PA2 | REF | full-length | HECTD2-AS1 | 0.93 |
0.97 |
0.98 |
0.97 |
0.21 |
0.94 |
0.97 |
0.98 |
0.97 |
0.97 |
0.98 |
0.97 |
chr10 | 91643839 | 91650295 | chr10:91643839-91650295:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.13 |
0.1 |
0.43 |
0.63 |
0.57 |
0.9 |
0.05 |
0.89 |
0.78 |
0.47 |
0.98 |
0.72 |
chr10 | 91749615 | 91755638 | chr10:91749615-91755638:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.67 |
0.06 |
0.97 |
0.66 |
0.48 |
0.93 |
0.69 |
0.98 |
0.97 |
0.82 |
0.98 |
0.98 |
chr10 | 93520973 | 93527095 | chr10:93520973-93527095:+:L1PA4:REF | L1PA4 | REF | full-length | CEP55 | 0.97 |
0.98 |
0.98 |
0.98 |
0.96 |
0.99 |
0.98 |
0.99 |
0.99 |
0.97 |
0.98 |
0.99 |
chr10 | 93534981 | 93537186 | chr10:93534981-93537186:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | CEP55 | 0.11 |
0.93 |
0.95 |
0.77 |
0.91 |
0.86 |
0.72 |
0.89 |
0.97 |
0.91 |
0.91 |
0.97 |
chr10 | 94824660 | 94830681 | chr10:94824660-94830681:-:L1PA2:REF | L1PA2 | REF | full-length | CYP2C19 | 0.03 |
0.62 |
0.84 |
0.48 |
0.61 |
0.63 |
0.81 |
0.6 |
0.84 |
0.53 |
0.68 |
0.97 |
chr10 | 94895414 | 94899047 | chr10:94895414-94899047:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.02 |
0.45 |
0.25 |
0.08 |
0.76 |
0.53 |
0.77 |
0.46 |
0.81 |
0.06 |
— | 0.95 |
chr10 | 95079215 | 95085109 | chr10:95079215-95085109:+:L1PA3:REF | L1PA3 | REF | full-length | CYP2C8 | — | 0.24 |
— | 0.68 |
0.84 |
0.74 |
0.91 |
0.82 |
0.92 |
— | 0.79 |
0.95 |
chr10 | 98541327 | 98544428 | chr10:98541327-98544428:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | HPSE2 | 0.01 |
0.64 |
0.75 |
0.04 |
0.55 |
0.75 |
0.15 |
0.74 |
0.84 |
0.49 |
0.67 |
0.31 |
chr10 | 98782941 | 98788971 | chr10:98782941-98788971:-:L1HS:REF | L1HS | REF | full-length | HPSE2 | 0.95 |
0.95 |
0.92 |
0.76 |
0.13 |
0.9 |
0.86 |
0.9 |
0.88 |
0.85 |
0.88 |
0.86 |
chr10 | 99099016 | 99105074 | chr10:99099016-99105074:+:L1PA5:REF | L1PA5 | REF | full-length | HPSE2 | 0.12 |
0.82 |
0.78 |
0.35 |
0.83 |
0.78 |
0.68 |
0.79 |
0.9 |
— | 0.74 |
0.76 |