Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr10 | 52730355 | 52736527 | chr10:52730355-52736527:-:L1PA3:REF | L1PA3 | REF | full-length | LOC105378305 | 0.02 |
0.09 |
0.93 |
0.77 |
0.9 |
0.91 |
0.98 |
0.92 |
0.97 |
0.91 |
0.87 |
0.93 |
chr10 | 53494006 | 53500000 | chr10:53494006-53500000:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.04 |
0.8 |
0.88 |
0.69 |
0.91 |
0.68 |
0.53 |
0.73 |
0.96 |
0.91 |
0.68 |
0.96 |
chr10 | 55601875 | 55607910 | chr10:55601875-55607910:+:L1PA3:REF | L1PA3 | REF | full-length | PCDH15 | 0.01 |
0.02 |
0.01 |
0.75 |
0.07 |
0.03 |
0.11 |
0.03 |
0.03 |
0.01 |
0.07 |
0.98 |
chr10 | 55683076 | 55689092 | chr10:55683076-55689092:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.77 |
0.82 |
0.81 |
0.91 |
0.68 |
0.73 |
0.69 |
0.84 |
0.93 |
0.81 |
0.91 |
chr10 | 55899641 | 55905708 | chr10:55899641-55905708:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.77 |
0.84 |
0.72 |
0.09 |
0.64 |
0.69 |
0.78 |
0.21 |
0.06 |
0.78 |
0.96 |
chr10 | 56442079 | 56448236 | chr10:56442079-56448236:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.82 |
0.24 |
0.23 |
0.7 |
0.45 |
0.35 |
0.49 |
0.76 |
0.19 |
0.48 |
0.91 |
chr10 | 56683821 | 56689958 | chr10:56683821-56689958:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.02 |
0.59 |
0.27 |
0.13 |
0.75 |
0.39 |
0.37 |
0.34 |
0.79 |
0.15 |
0.41 |
0.7 |
chr10 | 58675839 | 58681636 | chr10:58675839-58681636:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | BICC1 | 0.0 |
0.4 |
0.96 |
0.33 |
0.94 |
0.97 |
0.91 |
0.97 |
0.96 |
0.25 |
0.96 |
0.9 |
chr10 | 59037844 | 59043990 | chr10:59037844-59043990:-:L1PA6:REF | L1PA6 | REF | full-length | — | 0.01 |
0.24 |
0.74 |
0.22 |
0.89 |
0.67 |
0.97 |
0.75 |
0.93 |
0.23 |
0.73 |
0.96 |
chr10 | 59207135 | 59207609 | chr10:59207135-59207609:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | PHYHIPL | — | — | 0.46 |
— | 0.81 |
— | 1.0 |
— | — | 0.07 |
0.33 |
0.75 |
chr10 | 60692960 | 60698897 | chr10:60692960-60698897:+:L1PA3:REF | L1PA3 | REF | full-length | ANK3 | 0.02 |
0.36 |
0.97 |
0.9 |
0.88 |
0.66 |
0.37 |
0.78 |
0.94 |
— | 0.79 |
0.96 |
chr10 | 61002940 | 61009034 | chr10:61002940-61009034:-:L1PA6:REF | L1PA6 | REF | full-length | RHOBTB1 | 0.29 |
0.94 |
0.92 |
0.78 |
0.88 |
0.83 |
0.97 |
0.86 |
0.91 |
0.83 |
0.92 |
0.92 |
chr10 | 62602750 | 62608755 | chr10:62602750-62608755:-:L1PA2:REF | L1PA2 | REF | full-length | ZNF365 | 0.02 |
0.86 |
0.17 |
0.85 |
0.1 |
0.88 |
0.5 |
0.92 |
0.55 |
0.01 |
0.96 |
0.95 |
chr10 | 62672214 | 62678359 | chr10:62672214-62678359:-:L1PA3:REF | L1PA3 | REF | full-length | ZNF365 | 0.07 |
0.72 |
0.76 |
0.63 |
0.59 |
0.75 |
0.7 |
0.72 |
0.78 |
0.58 |
0.74 |
0.8 |
chr10 | 62782003 | 62785652 | chr10:62782003-62785652:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | — | — | — | — | — | — | 0.38 |
— | — | — | 0.81 |
0.89 |
chr10 | 63944638 | 63950772 | chr10:63944638-63950772:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.91 |
0.88 |
0.68 |
0.91 |
0.75 |
0.5 |
0.71 |
0.96 |
0.66 |
0.75 |
0.98 |
chr10 | 64015342 | 64021547 | chr10:64015342-64021547:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.7 |
0.71 |
0.64 |
0.86 |
0.75 |
0.76 |
0.75 |
0.93 |
0.53 |
0.7 |
0.98 |
chr10 | 64924285 | 64930261 | chr10:64924285-64930261:+:L1PA3:REF | L1PA3 | REF | full-length | LINC02671 | 0.03 |
0.74 |
0.14 |
0.44 |
0.43 |
0.4 |
0.49 |
0.55 |
0.46 |
0.13 |
0.7 |
0.98 |
chr10 | 66436526 | 66439146 | chr10:66436526-66439146:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | CTNNA3 | 0.03 |
— | 0.15 |
0.03 |
0.9 |
0.4 |
0.21 |
0.42 |
— | 0.26 |
0.36 |
0.98 |
chr10 | 66442673 | 66448861 | chr10:66442673-66448861:+:L1PA4:REF | L1PA4 | REF | full-length | CTNNA3 | 0.01 |
0.89 |
0.56 |
0.22 |
0.8 |
0.61 |
0.57 |
0.69 |
0.93 |
0.28 |
0.63 |
0.97 |
chr10 | 66690979 | 66694606 | chr10:66690979-66694606:+:L1P1:REF | L1P1 | REF | 3prime-truncated | CTNNA3 | 0.02 |
0.92 |
0.91 |
0.55 |
0.87 |
0.89 |
0.63 |
0.93 |
0.97 |
0.67 |
0.84 |
0.92 |
chr10 | 67230665 | 67236674 | chr10:67230665-67236674:+:L1PA3:REF | L1PA3 | REF | full-length | CTNNA3 | 0.01 |
0.11 |
0.1 |
0.65 |
0.14 |
0.29 |
0.36 |
0.28 |
0.43 |
0.19 |
0.16 |
0.98 |
chr10 | 67387044 | 67393069 | chr10:67387044-67393069:+:L1PA3:REF | L1PA3 | REF | full-length | CTNNA3 | 0.02 |
0.67 |
0.4 |
0.74 |
0.08 |
0.17 |
0.16 |
0.19 |
0.26 |
0.02 |
0.1 |
0.99 |
chr10 | 67558505 | 67564644 | chr10:67558505-67564644:+:L1PA5:REF | L1PA5 | REF | full-length | CTNNA3 | 0.01 |
0.93 |
0.9 |
0.74 |
0.89 |
0.82 |
0.51 |
0.9 |
0.97 |
0.79 |
0.8 |
0.99 |
chr10 | 73323334 | 73329500 | chr10:73323334-73329500:+:L1PA3:REF | L1PA3 | REF | full-length | CFAP70 | 0.8 |
0.94 |
0.96 |
0.93 |
0.92 |
0.87 |
0.81 |
0.89 |
0.89 |
0.91 |
0.9 |
0.97 |
chr10 | 74216880 | 74223021 | chr10:74216880-74223021:+:L1PA3:REF | L1PA3 | REF | full-length | ADK | 0.98 |
0.95 |
0.98 |
0.98 |
0.93 |
0.96 |
0.96 |
0.98 |
0.97 |
0.95 |
0.98 |
0.99 |
chr10 | 74571874 | 74574153 | chr10:74571874-74574153:-:L1P1:REF | L1P1 | REF | 3prime-truncated | ADK | 0.98 |
0.97 |
0.98 |
0.97 |
0.91 |
0.98 |
0.97 |
0.98 |
0.97 |
0.98 |
0.98 |
0.98 |
chr10 | 75558530 | 75564686 | chr10:75558530-75564686:-:L1PA3:REF | L1PA3 | REF | full-length | LRMDA | 0.15 |
0.96 |
0.94 |
0.9 |
0.89 |
0.86 |
0.99 |
0.83 |
0.97 |
0.92 |
0.91 |
0.9 |
chr10 | 75575579 | 75581586 | chr10:75575579-75581586:+:L1P2:REF | L1P2 | REF | 3prime-truncated | LRMDA | 0.02 |
0.76 |
0.67 |
0.42 |
0.95 |
0.34 |
0.97 |
0.35 |
0.86 |
0.62 |
0.55 |
0.54 |
chr10 | 76142708 | 76148837 | chr10:76142708-76148837:-:L1PA4:REF | L1PA4 | REF | full-length | LRMDA | 0.01 |
0.71 |
0.88 |
0.4 |
0.85 |
0.94 |
0.97 |
0.83 |
0.91 |
0.92 |
0.87 |
0.74 |
chr10 | 76608512 | 76614828 | chr10:76608512-76614828:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.34 |
0.61 |
0.11 |
0.85 |
0.7 |
0.39 |
0.82 |
0.91 |
0.28 |
0.8 |
0.52 |
chr10 | 76846210 | 76852331 | chr10:76846210-76852331:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.75 |
0.88 |
0.32 |
0.93 |
0.85 |
0.47 |
0.89 |
0.95 |
0.76 |
0.93 |
0.82 |
chr10 | 78088450 | 78094479 | chr10:78088450-78094479:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.08 |
0.95 |
0.97 |
0.63 |
0.35 |
0.83 |
0.81 |
0.78 |
0.9 |
0.92 |
0.76 |
0.94 |
chr10 | 78096087 | 78099309 | chr10:78096087-78099309:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | — | — | 0.37 |
— | 0.67 |
— | 0.06 |
— | — | 0.12 |
0.31 |
0.29 |
chr10 | 78676493 | 78682651 | chr10:78676493-78682651:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.93 |
0.91 |
0.58 |
0.91 |
0.93 |
0.88 |
0.93 |
0.97 |
0.7 |
0.9 |
0.89 |
chr10 | 79956165 | 79962310 | chr10:79956165-79962310:+:L1PA4:REF | L1PA4 | REF | full-length | SFTPD | 0.0 |
0.85 |
0.69 |
0.38 |
0.87 |
0.64 |
0.43 |
0.61 |
0.77 |
0.47 |
0.63 |
0.44 |
chr10 | 80722509 | 80728544 | chr10:80722509-80728544:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.23 |
0.96 |
0.77 |
0.47 |
0.81 |
0.73 |
0.72 |
0.74 |
0.94 |
0.65 |
0.72 |
0.8 |
chr10 | 80881468 | 80887604 | chr10:80881468-80887604:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.97 |
0.19 |
0.02 |
0.92 |
0.35 |
0.25 |
0.57 |
0.7 |
0.03 |
0.46 |
0.24 |
chr10 | 81441665 | 81441975 | chr10:81441665-81441975:-:L1HS:REF | L1HS | REF | 3prime-truncated | — | — | 0.96 |
0.8 |
0.66 |
0.87 |
0.8 |
0.71 |
0.83 |
0.96 |
0.5 |
0.73 |
0.87 |
chr10 | 81709615 | 81715642 | chr10:81709615-81715642:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.94 |
0.79 |
0.51 |
0.75 |
0.81 |
0.73 |
0.85 |
0.97 |
0.44 |
0.77 |
0.85 |
chr10 | 82344062 | 82350086 | chr10:82344062-82350086:-:L1PA2:REF | L1PA2 | REF | full-length | NRG3 | 0.05 |
0.57 |
0.96 |
0.82 |
0.09 |
0.9 |
0.89 |
0.84 |
0.93 |
0.54 |
0.82 |
0.88 |
chr10 | 83088894 | 83095334 | chr10:83088894-83095334:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.96 |
0.49 |
0.48 |
0.64 |
0.39 |
0.02 |
0.41 |
0.69 |
0.03 |
0.24 |
0.11 |
chr10 | 83294270 | 83294493 | chr10:83294270-83294493:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.01 |
0.35 |
0.58 |
0.81 |
0.94 |
0.55 |
0.15 |
0.6 |
0.87 |
0.03 |
0.51 |
0.46 |
chr10 | 83741800 | 83747326 | chr10:83741800-83747326:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.01 |
0.82 |
0.12 |
0.96 |
0.85 |
0.22 |
0.02 |
0.17 |
0.82 |
0.0 |
0.08 |
0.04 |
chr10 | 83781056 | 83787087 | chr10:83781056-83787087:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.95 |
0.84 |
0.95 |
0.14 |
0.81 |
0.66 |
0.81 |
0.9 |
0.6 |
0.74 |
0.84 |
chr10 | 84279967 | 84286006 | chr10:84279967-84286006:+:L1PA2:REF | L1PA2 | REF | full-length | LINC00858 | 0.01 |
0.42 |
0.91 |
0.85 |
0.05 |
0.79 |
0.12 |
0.88 |
0.65 |
0.01 |
0.77 |
0.72 |
chr10 | 84756878 | 84762878 | chr10:84756878-84762878:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.69 |
0.96 |
0.63 |
0.27 |
0.83 |
0.92 |
0.8 |
0.93 |
0.49 |
0.81 |
0.92 |
chr10 | 84773056 | 84779262 | chr10:84773056-84779262:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.62 |
0.86 |
0.75 |
0.78 |
0.78 |
0.66 |
0.82 |
0.95 |
0.49 |
0.76 |
0.94 |
chr10 | 84971957 | 84978109 | chr10:84971957-84978109:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.03 |
0.07 |
0.04 |
0.92 |
0.13 |
0.02 |
0.17 |
0.93 |
0.04 |
0.16 |
0.08 |
chr10 | 85274403 | 85280845 | chr10:85274403-85280845:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.89 |
0.51 |
0.01 |
0.72 |
0.26 |
0.14 |
0.1 |
0.92 |
0.06 |
0.08 |
0.05 |