Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr6 | 99823597 | 99829594 | chr6:99823597-99829594:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.4 |
0.62 |
0.88 |
0.07 |
0.1 |
0.01 |
0.03 |
— | 0.05 |
0.66 |
0.92 |
chr6 | 99925836 | 99931990 | chr6:99925836-99931990:-:L1PA3:REF | L1PA3 | REF | full-length | MCHR2 | 0.01 |
0.81 |
0.88 |
0.77 |
0.81 |
0.97 |
0.78 |
0.9 |
0.96 |
0.83 |
0.94 |
0.97 |
chr6 | 99969576 | 99975717 | chr6:99969576-99975717:-:L1PA4:REF | L1PA4 | REF | full-length | MCHR2 | 0.01 |
0.8 |
0.65 |
0.44 |
0.89 |
0.77 |
— | 0.66 |
0.96 |
0.37 |
0.75 |
0.97 |
chr6 | 100196461 | 100202490 | chr6:100196461-100202490:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.88 |
0.92 |
0.97 |
0.94 |
0.08 |
0.99 |
0.93 |
0.97 |
0.95 |
0.57 |
0.98 |
0.48 |
chr6 | 100354703 | 100360725 | chr6:100354703-100360725:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.07 |
0.96 |
0.97 |
0.89 |
0.13 |
0.97 |
0.89 |
0.95 |
0.86 |
0.88 |
0.98 |
0.98 |
chr6 | 100580586 | 100586736 | chr6:100580586-100586736:-:L1PA3:REF | L1PA3 | REF | full-length | ASCC3 | 0.84 |
0.8 |
0.92 |
0.93 |
0.76 |
0.81 |
0.99 |
0.83 |
0.92 |
0.86 |
0.99 |
0.97 |
chr6 | 101028531 | 101031465 | chr6:101028531-101031465:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.01 |
0.93 |
0.79 |
0.96 |
0.86 |
0.77 |
0.29 |
0.78 |
0.89 |
0.83 |
0.8 |
0.91 |
chr6 | 101048507 | 101054605 | chr6:101048507-101054605:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.01 |
0.78 |
0.39 |
0.52 |
0.49 |
0.45 |
0.02 |
0.38 |
0.62 |
0.31 |
0.67 |
0.62 |
chr6 | 101152252 | 101158269 | chr6:101152252-101158269:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.83 |
0.71 |
0.81 |
0.87 |
0.88 |
0.59 |
0.75 |
0.97 |
0.7 |
0.8 |
0.95 |
chr6 | 101659470 | 101661929 | chr6:101659470-101661929:-:L1P3:REF | L1P3 | REF | 3prime-truncated | GRIK2 | 0.0 |
0.9 |
0.38 |
0.88 |
0.88 |
0.91 |
0.06 |
0.87 |
— | 0.54 |
0.8 |
0.95 |
chr6 | 101788209 | 101794361 | chr6:101788209-101794361:-:L1PA3:REF | L1PA3 | REF | full-length | GRIK2 | 0.01 |
0.9 |
0.82 |
0.98 |
0.86 |
0.93 |
0.63 |
0.92 |
0.97 |
0.73 |
0.93 |
0.92 |
chr6 | 102088197 | 102094226 | chr6:102088197-102094226:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.91 |
0.66 |
0.93 |
0.81 |
0.81 |
0.67 |
0.75 |
0.92 |
0.73 |
0.8 |
0.98 |
chr6 | 102722105 | 102725773 | chr6:102722105-102725773:+:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | — | 0.96 |
0.84 |
0.95 |
— | 0.81 |
— | 0.81 |
— | 0.95 |
0.93 |
0.98 |
chr6 | 102752889 | 102758907 | chr6:102752889-102758907:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.98 |
0.82 |
0.91 |
0.15 |
0.82 |
0.78 |
0.79 |
0.97 |
0.93 |
0.93 |
0.89 |
chr6 | 103709031 | 103715056 | chr6:103709031-103715056:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.9 |
0.82 |
0.93 |
0.47 |
0.83 |
0.83 |
0.84 |
0.91 |
0.91 |
0.76 |
0.98 |
chr6 | 104374607 | 104380755 | chr6:104374607-104380755:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.09 |
0.36 |
0.44 |
0.78 |
0.8 |
0.57 |
0.22 |
0.5 |
0.79 |
0.53 |
0.5 |
0.93 |
chr6 | 104489393 | 104495424 | chr6:104489393-104495424:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.93 |
0.94 |
0.93 |
0.12 |
0.9 |
0.85 |
0.83 |
0.96 |
0.89 |
0.87 |
0.98 |
chr6 | 104670787 | 104677213 | chr6:104670787-104677213:+:L1PA7:REF | L1PA7 | REF | full-length | — | — | 0.91 |
0.63 |
0.72 |
0.78 |
0.62 |
0.24 |
— | — | 0.75 |
0.62 |
0.97 |
chr6 | 104737315 | 104743324 | chr6:104737315-104743324:+:L1PA2:REF | L1PA2 | REF | full-length | HACE1 | 0.94 |
0.98 |
0.97 |
0.88 |
0.11 |
0.98 |
0.98 |
0.98 |
0.95 |
0.96 |
0.98 |
0.93 |
chr6 | 104756574 | 104762708 | chr6:104756574-104762708:+:L1PA7:REF | L1PA7 | REF | full-length | HACE1 | 0.89 |
0.99 |
0.98 |
0.96 |
0.95 |
0.97 |
0.98 |
0.97 |
0.98 |
0.96 |
0.97 |
0.98 |
chr6 | 106404578 | 106411023 | chr6:106404578-106411023:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.08 |
0.97 |
0.9 |
0.65 |
0.91 |
0.56 |
0.27 |
0.66 |
0.95 |
0.79 |
0.62 |
0.96 |
chr6 | 107166663 | 107170611 | chr6:107166663-107170611:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | PDSS2 | 0.84 |
0.97 |
0.97 |
0.97 |
0.9 |
0.96 |
0.98 |
0.99 |
0.96 |
0.97 |
0.98 |
0.99 |
chr6 | 107854715 | 107860748 | chr6:107854715-107860748:-:L1PA3:REF | L1PA3 | REF | full-length | SEC63 | 0.48 |
0.98 |
0.97 |
— | 0.21 |
0.91 |
0.01 |
0.88 |
0.94 |
0.95 |
0.86 |
0.8 |
chr6 | 108410815 | 108416935 | chr6:108410815-108416935:+:L1PA5:REF | L1PA5 | REF | full-length | AFG1L | 0.98 |
0.96 |
0.96 |
0.98 |
0.87 |
0.96 |
0.98 |
0.89 |
0.97 |
0.97 |
0.8 |
0.96 |
chr6 | 109245218 | 109251251 | chr6:109245218-109251251:-:L1PA2:REF | L1PA2 | REF | full-length | CCDC162P | 0.9 |
0.04 |
0.96 |
0.96 |
0.09 |
0.87 |
0.01 |
0.85 |
0.85 |
0.02 |
0.92 |
0.94 |
chr6 | 109534604 | 109540728 | chr6:109534604-109540728:-:L1PA5:REF | L1PA5 | REF | full-length | AK9 | 0.01 |
0.62 |
0.81 |
0.42 |
0.86 |
0.59 |
0.33 |
0.62 |
0.78 |
0.57 |
0.7 |
0.82 |
chr6 | 109678655 | 109682143 | chr6:109678655-109682143:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | AK9 | 0.14 |
— | 0.88 |
— | 0.24 |
— | 0.16 |
— | — | 0.75 |
0.79 |
— |
chr6 | 111505512 | 111507862 | chr6:111505512-111507862:-:L1P2:REF | L1P2 | REF | 3prime-truncated | TRAF3IP2-AS1 | 0.9 |
0.97 |
0.95 |
0.96 |
0.92 |
0.97 |
0.96 |
0.97 |
0.93 |
0.97 |
0.98 |
0.95 |
chr6 | 111903001 | 111909020 | chr6:111903001-111909020:-:L1PA2:REF | L1PA2 | REF | full-length | LINC02527 | 0.41 |
0.97 |
0.98 |
0.98 |
0.15 |
0.96 |
0.94 |
0.97 |
0.91 |
0.86 |
0.95 |
0.98 |
chr6 | 111929039 | 111935422 | chr6:111929039-111935422:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.88 |
0.71 |
0.48 |
0.81 |
0.64 |
0.18 |
0.84 |
0.91 |
0.73 |
0.79 |
0.94 |
chr6 | 112421100 | 112426517 | chr6:112421100-112426517:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
0.3 |
0.94 |
0.33 |
0.86 |
0.92 |
0.02 |
0.96 |
0.96 |
0.85 |
0.88 |
0.96 |
chr6 | 112703745 | 112709778 | chr6:112703745-112709778:+:L1HS:REF | L1HS | REF | full-length | — | 0.28 |
0.77 |
0.91 |
0.61 |
0.11 |
0.87 |
0.5 |
0.9 |
0.89 |
0.96 |
0.94 |
0.91 |
chr6 | 112813021 | 112819047 | chr6:112813021-112819047:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.05 |
0.25 |
0.94 |
0.65 |
0.13 |
0.95 |
0.81 |
0.96 |
0.85 |
0.91 |
0.98 |
0.98 |
chr6 | 113226487 | 113232515 | chr6:113226487-113232515:+:L1PA2:REF | L1PA2 | REF | full-length | — | — | 0.95 |
— | — | — | — | — | — | — | 0.98 |
0.96 |
0.97 |
chr6 | 113531117 | 113537147 | chr6:113531117-113537147:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.06 |
0.02 |
0.94 |
0.97 |
0.24 |
0.96 |
0.94 |
0.96 |
0.88 |
0.85 |
0.97 |
0.98 |
chr6 | 114720722 | 114726752 | chr6:114720722-114726752:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.87 |
0.73 |
0.58 |
0.75 |
0.81 |
0.83 |
0.75 |
— | 0.82 |
0.78 |
0.89 |
chr6 | 114799879 | 114806049 | chr6:114799879-114806049:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.66 |
0.83 |
0.45 |
0.91 |
0.8 |
0.85 |
0.83 |
0.97 |
0.63 |
0.87 |
0.88 |
chr6 | 114865297 | 114865826 | chr6:114865297-114865826:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.03 |
0.77 |
0.55 |
0.44 |
0.86 |
0.58 |
0.43 |
0.63 |
0.94 |
0.5 |
0.64 |
0.77 |
chr6 | 114970386 | 114976401 | chr6:114970386-114976401:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.85 |
0.74 |
0.49 |
0.78 |
0.79 |
0.8 |
0.71 |
0.94 |
0.71 |
0.75 |
0.79 |
chr6 | 115121250 | 115125215 | chr6:115121250-115125215:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.02 |
0.11 |
0.68 |
0.2 |
0.91 |
0.66 |
0.44 |
0.69 |
0.94 |
0.51 |
0.69 |
0.84 |
chr6 | 115175227 | 115181228 | chr6:115175227-115181228:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.91 |
0.85 |
0.66 |
0.9 |
0.76 |
0.65 |
0.85 |
0.95 |
0.7 |
0.77 |
0.94 |
chr6 | 115222081 | 115228219 | chr6:115222081-115228219:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.04 |
0.58 |
0.1 |
0.01 |
0.86 |
0.19 |
0.02 |
0.16 |
0.89 |
0.11 |
0.2 |
0.54 |
chr6 | 115250072 | 115256240 | chr6:115250072-115256240:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.73 |
0.51 |
0.26 |
0.85 |
0.64 |
0.63 |
0.58 |
0.91 |
0.41 |
0.53 |
0.57 |
chr6 | 115391257 | 115395055 | chr6:115391257-115395055:-:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.0 |
0.78 |
0.35 |
0.0 |
0.86 |
0.39 |
0.0 |
0.07 |
— | 0.5 |
0.42 |
0.59 |
chr6 | 115644847 | 115649287 | chr6:115644847-115649287:+:L1P3:REF | L1P3 | REF | 3prime-truncated | LINC02534 | 0.01 |
0.96 |
0.67 |
0.09 |
0.88 |
0.82 |
0.37 |
0.73 |
0.94 |
0.8 |
0.84 |
0.86 |
chr6 | 115960032 | 115966060 | chr6:115960032-115966060:+:L1PA2:REF | L1PA2 | REF | full-length | FRK | 0.03 |
0.52 |
0.95 |
0.96 |
0.15 |
0.86 |
0.98 |
0.82 |
0.89 |
0.79 |
0.88 |
0.98 |
chr6 | 116342691 | 116348145 | chr6:116342691-116348145:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | DSE | 0.01 |
0.87 |
0.96 |
0.75 |
0.92 |
0.91 |
0.39 |
0.95 |
0.96 |
0.91 |
0.94 |
1.0 |
chr6 | 116638696 | 116644847 | chr6:116638696-116644847:+:L1PA3:REF | L1PA3 | REF | full-length | ZUP1 | 0.98 |
0.93 |
0.98 |
0.86 |
0.89 |
0.98 |
0.91 |
0.93 |
0.98 |
0.98 |
0.98 |
0.99 |
chr6 | 116816523 | 116818252 | chr6:116816523-116818252:+:L1PA2:REF | L1PA2 | REF | 3prime-truncated | GPRC6A | 0.0 |
0.94 |
0.93 |
0.78 |
0.3 |
0.84 |
0.87 |
0.86 |
0.9 |
0.92 |
0.86 |
0.97 |
chr6 | 117040919 | 117044554 | chr6:117040919-117044554:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.01 |
0.24 |
0.84 |
0.17 |
0.85 |
0.48 |
0.02 |
0.48 |
0.9 |
0.46 |
0.59 |
0.98 |