Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr7 | 43773137 | 43779287 | chr7:43773137-43779287:-:L1PA4:REF | L1PA4 | REF | full-length | BLVRA | 0.2 |
0.67 |
0.96 |
— | 0.93 |
0.97 |
0.77 |
0.98 |
0.95 |
0.43 |
0.97 |
0.9 |
chr7 | 45377515 | 45383528 | chr7:45377515-45383528:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | 0.9 |
— | 0.64 |
— | — | 0.72 |
0.68 |
0.87 |
chr7 | 45947419 | 45953420 | chr7:45947419-45953420:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.97 |
0.9 |
0.95 |
0.9 |
0.95 |
0.88 |
0.94 |
0.97 |
0.75 |
0.93 |
0.97 |
chr7 | 46590735 | 46596528 | chr7:46590735-46596528:+:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.0 |
0.79 |
0.91 |
0.61 |
0.9 |
0.96 |
0.29 |
0.97 |
0.93 |
0.4 |
0.94 |
0.9 |
chr7 | 48601227 | 48607497 | chr7:48601227-48607497:-:L1PA7:REF | L1PA7 | REF | full-length | ABCA13 | 0.05 |
0.59 |
0.66 |
0.3 |
0.86 |
0.47 |
0.23 |
0.65 |
0.9 |
0.36 |
0.48 |
0.55 |
chr7 | 49649738 | 49655883 | chr7:49649738-49655883:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.22 |
0.38 |
0.16 |
0.82 |
0.35 |
0.19 |
0.35 |
0.74 |
0.26 |
0.35 |
0.4 |
chr7 | 49680245 | 49686300 | chr7:49680245-49686300:-:L1HS:REF | L1HS | REF | full-length | — | 0.18 |
0.85 |
0.94 |
0.72 |
0.14 |
0.91 |
0.85 |
0.83 |
0.93 |
0.8 |
0.85 |
0.93 |
chr7 | 50898842 | 50904874 | chr7:50898842-50904874:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.92 |
0.95 |
0.72 |
0.06 |
0.87 |
0.88 |
0.9 |
0.91 |
0.64 |
0.87 |
0.97 |
chr7 | 51533170 | 51537238 | chr7:51533170-51537238:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | — | — | — | 0.12 |
0.93 |
— | 0.04 |
0.35 |
— | 0.12 |
0.36 |
0.25 |
chr7 | 51594010 | 51600147 | chr7:51594010-51600147:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.52 |
0.82 |
0.21 |
0.88 |
0.67 |
0.14 |
0.67 |
0.95 |
0.3 |
0.63 |
0.66 |
chr7 | 51833472 | 51839489 | chr7:51833472-51839489:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | 0.62 |
0.2 |
0.47 |
0.6 |
0.45 |
— | — | 0.38 |
0.65 |
0.75 |
chr7 | 51889909 | 51895941 | chr7:51889909-51895941:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.85 |
0.68 |
0.33 |
0.32 |
0.65 |
0.74 |
0.65 |
0.9 |
0.43 |
0.72 |
0.68 |
chr7 | 53026321 | 53032336 | chr7:53026321-53032336:-:L1PA2:REF | L1PA2 | REF | full-length | POM121L12 | — | 0.58 |
— | 0.62 |
0.16 |
0.73 |
0.67 |
0.8 |
0.94 |
0.55 |
0.78 |
0.8 |
chr7 | 54041299 | 54047468 | chr7:54041299-54047468:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
0.26 |
0.24 |
0.04 |
0.88 |
0.53 |
0.11 |
0.5 |
0.92 |
0.02 |
0.46 |
0.39 |
chr7 | 54319615 | 54324273 | chr7:54319615-54324273:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | LINC01445 | 0.0 |
0.54 |
0.35 |
0.02 |
0.84 |
0.53 |
0.02 |
0.45 |
0.88 |
0.05 |
0.32 |
0.06 |
chr7 | 54500000 | 54504884 | chr7:54500000-54504884:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.0 |
0.96 |
0.47 |
0.65 |
0.92 |
0.65 |
0.48 |
0.53 |
0.82 |
0.16 |
0.48 |
0.71 |
chr7 | 54853310 | 54856482 | chr7:54853310-54856482:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
0.98 |
0.8 |
0.94 |
0.85 |
0.9 |
0.04 |
0.92 |
0.96 |
0.75 |
0.42 |
0.99 |
chr7 | 56506419 | 56512558 | chr7:56506419-56512558:-:L1PA4:REF | L1PA4 | REF | full-length | DKFZp434L192 | 0.01 |
0.44 |
0.23 |
0.23 |
0.64 |
0.5 |
0.01 |
0.49 |
0.67 |
0.02 |
0.51 |
0.17 |
chr7 | 56584796 | 56590824 | chr7:56584796-56590824:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.04 |
0.62 |
0.41 |
0.46 |
0.62 |
0.67 |
0.53 |
— | 0.88 |
0.24 |
— | 0.72 |
chr7 | 56838414 | 56844525 | chr7:56838414-56844525:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | 0.57 |
— | 0.93 |
— | 0.65 |
— | — | 0.28 |
0.64 |
0.74 |
chr7 | 57036531 | 57042552 | chr7:57036531-57042552:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
0.68 |
0.55 |
0.61 |
0.74 |
0.72 |
0.66 |
0.71 |
0.85 |
0.32 |
0.77 |
0.81 |
chr7 | 57539590 | 57540834 | chr7:57539590-57540834:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.01 |
0.46 |
0.19 |
0.23 |
0.77 |
0.63 |
0.28 |
0.7 |
0.83 |
0.07 |
0.66 |
0.55 |
chr7 | 58091455 | 58093722 | chr7:58091455-58093722:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.0 |
0.24 |
0.21 |
0.23 |
0.52 |
0.33 |
0.3 |
0.42 |
0.52 |
0.12 |
0.35 |
0.31 |
chr7 | 63148831 | 63154859 | chr7:63148831-63154859:-:L1HS:REF | L1HS | REF | full-length | — | 0.03 |
0.65 |
0.62 |
0.72 |
0.25 |
0.46 |
0.6 |
0.8 |
0.77 |
0.39 |
0.75 |
0.83 |
chr7 | 63534282 | 63540307 | chr7:63534282-63540307:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.8 |
0.58 |
0.58 |
0.75 |
0.72 |
0.52 |
0.7 |
0.88 |
0.23 |
0.84 |
0.89 |
chr7 | 65464494 | 65470584 | chr7:65464494-65470584:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.24 |
0.97 |
0.96 |
0.52 |
0.91 |
0.67 |
0.97 |
0.7 |
0.88 |
0.9 |
0.67 |
0.95 |
chr7 | 66286853 | 66292884 | chr7:66286853-66292884:-:L1HS:REF | L1HS | REF | full-length | TPST1 | 0.76 |
0.76 |
0.97 |
0.91 |
0.08 |
0.94 |
0.97 |
0.94 |
0.75 |
0.06 |
0.98 |
0.98 |
chr7 | 70197328 | 70203357 | chr7:70197328-70203357:+:L1HS:REF | L1HS | REF | full-length | AUTS2 | 0.01 |
0.94 |
0.96 |
0.65 |
0.12 |
0.9 |
0.53 |
0.9 |
0.94 |
0.96 |
0.85 |
0.81 |
chr7 | 76561201 | 76567355 | chr7:76561201-76567355:-:L1PA4:REF | L1PA4 | REF | full-length | LOC100133091 | — | — | 0.91 |
— | 0.87 |
0.99 |
0.93 |
— | — | 0.91 |
0.97 |
0.81 |
chr7 | 76728485 | 76734513 | chr7:76728485-76734513:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.61 |
0.92 |
0.89 |
0.1 |
0.95 |
0.9 |
0.96 |
0.88 |
0.01 |
0.97 |
0.98 |
chr7 | 77084513 | 77090684 | chr7:77084513-77090684:-:L1PA4:REF | L1PA4 | REF | full-length | FAM185BP | 0.81 |
0.98 |
0.98 |
0.96 |
0.94 |
0.97 |
0.98 |
0.98 |
0.98 |
0.98 |
0.98 |
0.99 |
chr7 | 78855267 | 78861359 | chr7:78855267-78861359:-:L1PA5:REF | L1PA5 | REF | full-length | MAGI2 | 0.01 |
0.45 |
0.8 |
0.28 |
— | — | 0.61 |
— | — | 0.9 |
— | — |
chr7 | 78887745 | 78893889 | chr7:78887745-78893889:+:L1PA4:REF | L1PA4 | REF | full-length | MAGI2 | 0.0 |
0.49 |
0.76 |
0.36 |
0.88 |
0.94 |
0.78 |
0.97 |
0.95 |
0.79 |
0.97 |
0.95 |
chr7 | 79229794 | 79235811 | chr7:79229794-79235811:-:L1PA2:REF | L1PA2 | REF | full-length | MAGI2 | 0.02 |
0.83 |
0.96 |
0.75 |
0.08 |
0.97 |
0.98 |
0.94 |
0.88 |
0.93 |
0.99 |
0.99 |
chr7 | 79941091 | 79947236 | chr7:79941091-79947236:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.06 |
0.33 |
0.12 |
0.84 |
0.75 |
0.03 |
0.92 |
0.95 |
0.7 |
0.96 |
0.98 |
chr7 | 80713105 | 80719172 | chr7:80713105-80719172:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | 0.94 |
1.0 |
— | 0.9 |
0.96 |
0.44 |
— | 0.93 |
0.98 |
0.98 |
0.93 |
chr7 | 81824078 | 81830172 | chr7:81824078-81830172:-:L1PA6:REF | L1PA6 | REF | full-length | — | 0.0 |
0.14 |
0.47 |
0.74 |
0.83 |
0.38 |
0.01 |
0.62 |
0.82 |
0.57 |
0.56 |
0.74 |
chr7 | 82633099 | 82636876 | chr7:82633099-82636876:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
0.29 |
0.79 |
0.93 |
0.83 |
0.59 |
0.01 |
0.75 |
0.89 |
0.7 |
0.88 |
0.93 |
chr7 | 82649854 | 82652079 | chr7:82649854-82652079:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.01 |
0.8 |
0.85 |
0.63 |
0.91 |
0.72 |
0.39 |
0.86 |
0.95 |
0.8 |
0.91 |
0.98 |
chr7 | 83623760 | 83630242 | chr7:83623760-83630242:-:L1PA7:REF | L1PA7 | REF | full-length | SEMA3E | 0.0 |
0.7 |
0.83 |
0.18 |
0.87 |
0.39 |
0.35 |
0.63 |
0.96 |
0.8 |
0.71 |
0.86 |
chr7 | 83989325 | 83995342 | chr7:83989325-83995342:-:L1PA2:REF | L1PA2 | REF | full-length | SEMA3A | 0.06 |
0.94 |
0.98 |
0.91 |
0.52 |
0.98 |
0.93 |
0.96 |
0.98 |
0.98 |
0.98 |
0.99 |
chr7 | 84049711 | 84055730 | chr7:84049711-84055730:-:L1PA3:REF | L1PA3 | REF | full-length | SEMA3A | 0.01 |
0.77 |
0.83 |
0.99 |
0.36 |
0.83 |
0.82 |
0.94 |
0.87 |
0.64 |
0.83 |
0.9 |
chr7 | 84062409 | 84068436 | chr7:84062409-84068436:+:L1PA2:REF | L1PA2 | REF | full-length | SEMA3A | 0.02 |
0.95 |
0.99 |
0.87 |
0.22 |
0.98 |
0.98 |
0.96 |
0.96 |
0.98 |
0.99 |
0.95 |
chr7 | 84150229 | 84151670 | chr7:84150229-84151670:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | SEMA3A | 0.04 |
0.94 |
0.96 |
0.98 |
0.06 |
0.98 |
0.91 |
0.98 |
0.1 |
0.01 |
0.98 |
0.99 |
chr7 | 85249854 | 85255879 | chr7:85249854-85255879:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.0 |
0.71 |
0.96 |
0.5 |
0.01 |
0.87 |
0.54 |
0.9 |
0.88 |
0.9 |
0.92 |
0.99 |
chr7 | 85329687 | 85335739 | chr7:85329687-85335739:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.71 |
0.88 |
0.66 |
0.14 |
0.86 |
0.78 |
0.95 |
0.86 |
0.75 |
0.87 |
0.94 |
chr7 | 85790914 | 85791880 | chr7:85790914-85791880:+:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.03 |
— | 0.76 |
0.13 |
0.84 |
0.45 |
0.08 |
0.36 |
0.94 |
0.98 |
0.52 |
0.98 |
chr7 | 86340208 | 86346233 | chr7:86340208-86346233:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.64 |
0.71 |
0.58 |
0.17 |
0.71 |
0.47 |
0.73 |
0.95 |
0.01 |
0.74 |
0.97 |
chr7 | 86375397 | 86380999 | chr7:86375397-86380999:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.03 |
0.15 |
0.49 |
0.19 |
0.69 |
0.37 |
0.22 |
0.54 |
0.93 |
0.75 |
0.38 |
0.83 |
chr7 | 87039756 | 87045768 | chr7:87039756-87045768:+:L1PA2:REF | L1PA2 | REF | full-length | KIAA1324L | 0.0 |
0.94 |
0.92 |
0.01 |
0.02 |
0.63 |
0.34 |
0.76 |
0.03 |
0.26 |
0.73 |
0.01 |