Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr10 | 132087710 | 132093874 | chr10:132087710-132093874:-:L1PA5:REF | L1PA5 | REF | full-length | JAKMIP3 | — | 0.86 |
0.88 |
— | 0.95 |
0.59 |
0.7 |
0.78 |
0.9 |
0.34 |
0.79 |
0.85 |
chr11 | 3900112 | 3900580 | chr11:3900112-3900580:-:L1P1:REF | L1P1 | REF | 3prime-truncated | STIM1 | 0.93 |
0.94 |
0.94 |
0.97 |
0.91 |
0.97 |
0.97 |
0.95 |
0.95 |
0.9 |
0.92 |
0.91 |
chr11 | 3999589 | 4000000 | chr11:3999589-4000000:+:L1P1:REF | L1P1 | REF | 3prime-truncated | STIM1 | 0.94 |
0.97 |
0.98 |
0.85 |
0.86 |
0.94 |
0.95 |
0.97 |
0.94 |
0.91 |
0.95 |
0.99 |
chr11 | 4014005 | 4017206 | chr11:4014005-4017206:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | STIM1 | 0.93 |
0.96 |
0.97 |
0.95 |
0.95 |
0.98 |
0.98 |
0.96 |
0.95 |
0.95 |
0.85 |
0.97 |
chr11 | 4170252 | 4176276 | chr11:4170252-4176276:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.06 |
0.02 |
0.88 |
0.83 |
0.05 |
0.85 |
0.86 |
0.86 |
0.45 |
0.02 |
0.89 |
0.03 |
chr11 | 4531437 | 4534700 | chr11:4531437-4534700:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.03 |
0.6 |
0.8 |
0.02 |
0.72 |
0.68 |
0.76 |
0.55 |
0.44 |
0.46 |
0.33 |
0.18 |
chr11 | 4854097 | 4859276 | chr11:4854097-4859276:+:L1P2:REF | L1P2 | REF | 3prime-truncated | OR51H1 | 0.04 |
0.17 |
0.86 |
0.06 |
0.83 |
0.55 |
0.04 |
0.7 |
0.88 |
0.33 |
0.7 |
0.25 |
chr11 | 5412302 | 5418416 | chr11:5412302-5418416:+:L1PA3:REF | L1PA3 | REF | full-length | OR51B5 | — | — | 0.46 |
0.11 |
0.67 |
— | 0.28 |
— | — | 0.23 |
0.83 |
— |
chr11 | 5914493 | 5918448 | chr11:5914493-5918448:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.02 |
0.32 |
0.57 |
0.16 |
0.74 |
— | 0.46 |
0.37 |
0.75 |
0.26 |
0.45 |
— |
chr11 | 6143657 | 6149454 | chr11:6143657-6149454:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.05 |
0.32 |
0.8 |
0.64 |
0.24 |
0.63 |
0.05 |
0.67 |
0.77 |
0.23 |
0.7 |
0.82 |
chr11 | 6185350 | 6191366 | chr11:6185350-6191366:+:L1PA2:REF | L1PA2 | REF | full-length | OR52W1 | 0.03 |
0.88 |
0.93 |
0.84 |
0.26 |
0.85 |
0.88 |
0.89 |
0.95 |
0.76 |
0.87 |
0.96 |
chr11 | 6948755 | 6954881 | chr11:6948755-6954881:-:L1PA3:REF | L1PA3 | REF | full-length | ZNF215 | 0.97 |
0.37 |
0.97 |
0.42 |
0.84 |
0.93 |
0.75 |
0.98 |
0.97 |
0.98 |
0.96 |
0.98 |
chr11 | 7658148 | 7664171 | chr11:7658148-7664171:-:L1PA2:REF | L1PA2 | REF | full-length | CYB5R2 | 0.17 |
0.68 |
0.89 |
— | 0.88 |
0.94 |
— | 0.76 |
— | 0.84 |
0.86 |
0.91 |
chr11 | 7861034 | 7867070 | chr11:7861034-7867070:+:L1PA2:REF | L1PA2 | REF | full-length | LOC283299 | 0.02 |
0.43 |
0.93 |
0.61 |
0.09 |
0.88 |
0.63 |
0.79 |
0.94 |
0.77 |
0.82 |
0.89 |
chr11 | 8396496 | 8402626 | chr11:8396496-8402626:+:L1PA4:REF | L1PA4 | REF | full-length | STK33 | 0.01 |
0.62 |
0.97 |
0.61 |
0.89 |
0.7 |
0.8 |
0.84 |
0.88 |
0.94 |
0.75 |
0.97 |
chr11 | 9540333 | 9546363 | chr11:9540333-9546363:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.93 |
0.02 |
0.91 |
0.88 |
0.95 |
0.96 |
0.91 |
0.95 |
0.97 |
0.92 |
0.98 |
0.98 |
chr11 | 10173147 | 10179353 | chr11:10173147-10179353:+:L1PA3:REF | L1PA3 | REF | full-length | SBF2 | 0.31 |
0.97 |
0.98 |
0.96 |
0.91 |
0.98 |
0.97 |
0.97 |
0.97 |
0.97 |
0.98 |
0.99 |
chr11 | 10946356 | 10952722 | chr11:10946356-10952722:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.61 |
0.48 |
0.03 |
0.9 |
0.39 |
0.03 |
0.53 |
0.91 |
0.43 |
0.59 |
0.91 |
chr11 | 11273887 | 11274548 | chr11:11273887-11274548:+:L1P3:REF | L1P3 | REF | 3prime-truncated | GALNT18 | 0.0 |
0.97 |
0.91 |
0.01 |
0.85 |
0.75 |
0.26 |
0.86 |
0.99 |
0.87 |
0.68 |
0.97 |
chr11 | 11711306 | 11717431 | chr11:11711306-11717431:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.74 |
0.88 |
0.36 |
0.92 |
0.75 |
0.54 |
0.78 |
0.87 |
0.67 |
0.75 |
0.97 |
chr11 | 12365966 | 12372097 | chr11:12365966-12372097:+:L1PA6:REF | L1PA6 | REF | full-length | MICALCL | 0.4 |
0.75 |
0.89 |
0.83 |
0.65 |
0.95 |
0.6 |
0.95 |
0.87 |
0.88 |
0.95 |
0.94 |
chr11 | 13479955 | 13483886 | chr11:13479955-13483886:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | PTH | 0.13 |
0.98 |
0.96 |
0.99 |
0.93 |
0.82 |
— | 0.93 |
0.96 |
0.93 |
0.9 |
0.97 |
chr11 | 13623018 | 13629231 | chr11:13623018-13629231:-:L1PA4:REF | L1PA4 | REF | full-length | — | — | 0.88 |
0.88 |
— | 0.75 |
0.51 |
0.14 |
— | — | 0.59 |
0.54 |
0.6 |
chr11 | 13651253 | 13657406 | chr11:13651253-13657406:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.02 |
0.95 |
0.9 |
0.34 |
0.9 |
0.67 |
0.1 |
0.8 |
0.89 |
0.84 |
0.81 |
0.95 |
chr11 | 13990407 | 13993017 | chr11:13990407-13993017:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | SPON1 | 0.02 |
0.96 |
0.94 |
0.47 |
0.94 |
0.97 |
0.34 |
0.96 |
0.84 |
0.97 |
0.83 |
0.88 |
chr11 | 14628166 | 14634160 | chr11:14628166-14634160:-:L1PA2:REF | L1PA2 | REF | full-length | PSMA1 | 0.98 |
0.98 |
0.97 |
0.97 |
0.71 |
0.83 |
0.98 |
0.91 |
0.94 |
0.97 |
0.9 |
0.97 |
chr11 | 14661315 | 14667447 | chr11:14661315-14667447:+:L1PA3:REF | L1PA3 | REF | full-length | PDE3B | 0.95 |
0.96 |
0.97 |
0.92 |
0.91 |
0.86 |
0.9 |
0.94 |
0.94 |
0.98 |
0.9 |
0.89 |
chr11 | 14715908 | 14721938 | chr11:14715908-14721938:+:L1PA2:REF | L1PA2 | REF | full-length | PDE3B | 0.86 |
0.97 |
0.88 |
0.9 |
0.15 |
0.88 |
0.97 |
0.83 |
0.84 |
0.9 |
0.93 |
0.97 |
chr11 | 14844351 | 14850498 | chr11:14844351-14850498:+:L1PA3:REF | L1PA3 | REF | full-length | PDE3B | — | — | 0.98 |
— | 0.46 |
0.81 |
0.85 |
— | — | 0.97 |
0.9 |
0.97 |
chr11 | 16141388 | 16147513 | chr11:16141388-16147513:+:L1PA5:REF | L1PA5 | REF | full-length | SOX6 | 0.86 |
0.97 |
0.97 |
0.24 |
0.88 |
0.77 |
0.88 |
0.99 |
0.95 |
0.97 |
0.97 |
0.69 |
chr11 | 16496332 | 16500000 | chr11:16496332-16500000:+:L1P1:REF | L1P1 | REF | 3prime-truncated | SOX6 | 0.85 |
0.56 |
0.95 |
0.33 |
0.87 |
0.56 |
0.47 |
0.96 |
0.87 |
0.94 |
0.89 |
0.59 |
chr11 | 16520489 | 16526642 | chr11:16520489-16526642:+:L1PA4:REF | L1PA4 | REF | full-length | SOX6 | 0.84 |
0.29 |
0.91 |
0.22 |
0.89 |
0.68 |
0.43 |
0.99 |
0.84 |
0.92 |
0.92 |
0.85 |
chr11 | 18127075 | 18128929 | chr11:18127075-18128929:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | MRGPRX3 | 0.01 |
0.52 |
0.76 |
0.14 |
0.88 |
0.59 |
0.92 |
0.59 |
0.87 |
0.29 |
0.72 |
0.81 |
chr11 | 18658797 | 18664912 | chr11:18658797-18664912:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.03 |
0.25 |
0.64 |
0.33 |
0.94 |
0.48 |
0.34 |
0.5 |
— | 0.48 |
0.45 |
0.69 |
chr11 | 19135060 | 19141079 | chr11:19135060-19141079:+:L1PA3:REF | L1PA3 | REF | full-length | ZDHHC13 | — | — | 0.88 |
0.7 |
0.79 |
0.89 |
0.8 |
0.91 |
— | 0.82 |
0.86 |
— |
chr11 | 19581371 | 19587519 | chr11:19581371-19587519:-:L1PA4:REF | L1PA4 | REF | full-length | NAV2 | 0.0 |
0.84 |
0.89 |
0.91 |
0.91 |
0.95 |
0.4 |
0.92 |
0.96 |
0.82 |
0.96 |
0.85 |
chr11 | 21271922 | 21278061 | chr11:21271922-21278061:+:L1PA4:REF | L1PA4 | REF | full-length | NELL1 | 0.01 |
0.21 |
0.51 |
0.21 |
0.91 |
0.63 |
0.06 |
0.67 |
0.93 |
0.41 |
0.58 |
0.65 |
chr11 | 21289217 | 21290087 | chr11:21289217-21290087:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | NELL1 | 0.0 |
0.19 |
0.3 |
0.01 |
0.73 |
0.37 |
0.04 |
0.19 |
0.76 |
0.08 |
0.25 |
0.18 |
chr11 | 22001092 | 22001982 | chr11:22001092-22001982:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.01 |
0.47 |
0.57 |
0.33 |
0.81 |
0.65 |
0.68 |
0.61 |
0.9 |
0.23 |
0.65 |
0.55 |
chr11 | 22016002 | 22022021 | chr11:22016002-22022021:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.82 |
0.71 |
0.63 |
0.27 |
0.77 |
0.8 |
0.73 |
0.91 |
0.57 |
0.75 |
0.84 |
chr11 | 22284807 | 22290788 | chr11:22284807-22290788:+:L1PA2:REF | L1PA2 | REF | full-length | ANO5 | 0.02 |
0.69 |
0.96 |
0.66 |
0.56 |
0.81 |
0.69 |
0.81 |
0.96 |
0.95 |
0.8 |
0.9 |
chr11 | 22523178 | 22529212 | chr11:22523178-22529212:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.71 |
0.87 |
0.64 |
0.08 |
0.53 |
0.8 |
0.66 |
0.25 |
0.49 |
0.7 |
0.88 |
chr11 | 22646925 | 22652945 | chr11:22646925-22652945:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.05 |
0.96 |
0.97 |
0.82 |
0.41 |
0.87 |
0.98 |
0.91 |
0.95 |
0.68 |
0.88 |
0.93 |
chr11 | 23028117 | 23034138 | chr11:23028117-23034138:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.62 |
0.64 |
0.74 |
0.82 |
0.78 |
0.67 |
0.82 |
0.85 |
0.43 |
0.88 |
0.84 |
chr11 | 23298136 | 23304191 | chr11:23298136-23304191:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.92 |
0.94 |
0.92 |
0.92 |
0.97 |
0.84 |
0.95 |
0.97 |
0.73 |
0.98 |
0.95 |
chr11 | 24217113 | 24223259 | chr11:24217113-24223259:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.02 |
0.75 |
0.37 |
0.77 |
0.91 |
0.52 |
0.33 |
0.89 |
0.91 |
0.15 |
0.94 |
0.97 |
chr11 | 24327951 | 24334001 | chr11:24327951-24334001:+:L1HS:REF | L1HS | REF | full-length | — | 0.03 |
0.77 |
0.92 |
0.96 |
0.07 |
0.87 |
0.93 |
0.96 |
0.98 |
0.39 |
0.96 |
0.98 |
chr11 | 25275325 | 25281473 | chr11:25275325-25281473:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.04 |
0.49 |
0.33 |
0.33 |
0.71 |
0.46 |
0.23 |
0.51 |
0.88 |
0.2 |
0.43 |
0.74 |
chr11 | 25425132 | 25431158 | chr11:25425132-25431158:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.54 |
0.6 |
0.48 |
0.27 |
0.52 |
0.5 |
0.62 |
0.55 |
0.41 |
0.56 |
0.66 |
chr11 | 25500009 | 25502139 | chr11:25500009-25502139:-:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.07 |
0.77 |
0.73 |
0.79 |
0.35 |
0.72 |
0.67 |
0.8 |
0.87 |
0.5 |
0.75 |
0.87 |