Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr7 | 97329746 | 97332826 | chr7:97329746-97332826:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.0 |
0.87 |
0.96 |
0.16 |
0.83 |
0.53 |
0.37 |
0.54 |
0.91 |
0.91 |
0.62 |
0.92 |
chr7 | 97532571 | 97535703 | chr7:97532571-97535703:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | — | 0.91 |
0.92 |
0.29 |
0.9 |
— | 0.66 |
— | — | 0.87 |
0.83 |
0.9 |
chr7 | 97613656 | 97619688 | chr7:97613656-97619688:+:L1HS:REF | L1HS | REF | full-length | — | 0.03 |
0.75 |
0.91 |
0.62 |
0.19 |
0.74 |
0.82 |
0.79 |
0.92 |
0.95 |
0.78 |
0.87 |
chr7 | 97777899 | 97779479 | chr7:97777899-97779479:-:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.07 |
0.88 |
0.87 |
0.67 |
0.72 |
0.72 |
0.78 |
0.72 |
0.95 |
0.93 |
0.55 |
0.88 |
chr7 | 97810373 | 97816490 | chr7:97810373-97816490:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.01 |
0.86 |
0.89 |
0.52 |
0.79 |
0.5 |
0.17 |
0.72 |
0.7 |
0.83 |
0.81 |
0.88 |
chr7 | 99654085 | 99660201 | chr7:99654085-99660201:-:L1PA4:REF | L1PA4 | REF | full-length | ZSCAN25 | 0.78 |
0.95 |
0.9 |
0.92 |
0.89 |
0.9 |
0.97 |
0.87 |
0.94 |
0.86 |
0.87 |
0.97 |
chr7 | 99686019 | 99689554 | chr7:99686019-99689554:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | CYP3A7-CYP3A51P | 0.34 |
0.21 |
0.89 |
0.78 |
0.91 |
0.8 |
0.94 |
0.78 |
0.89 |
0.77 |
0.82 |
0.94 |
chr7 | 99799759 | 99803753 | chr7:99799759-99803753:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.83 |
0.89 |
0.75 |
0.14 |
0.88 |
0.51 |
0.98 |
0.68 |
0.88 |
0.25 |
0.75 |
0.92 |
chr7 | 99809199 | 99815231 | chr7:99809199-99815231:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.95 |
0.96 |
0.91 |
0.8 |
0.12 |
0.81 |
0.99 |
0.86 |
0.91 |
0.83 |
0.87 |
0.97 |
chr7 | 102780677 | 102786841 | chr7:102780677-102786841:+:L1PA4:REF | L1PA4 | REF | full-length | FAM185A | 0.98 |
0.98 |
0.98 |
0.97 |
0.96 |
0.99 |
0.99 |
0.99 |
0.97 |
0.98 |
0.98 |
0.99 |
chr7 | 103037829 | 103043543 | chr7:103037829-103043543:+:L1P2:REF | L1P2 | REF | 3prime-truncated | FBXL13 | 0.25 |
0.79 |
0.96 |
0.97 |
0.63 |
0.81 |
0.63 |
0.7 |
0.81 |
0.89 |
0.67 |
0.84 |
chr7 | 103404195 | 103406652 | chr7:103404195-103406652:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | SLC26A5 | 0.36 |
0.88 |
0.92 |
0.45 |
0.89 |
0.49 |
0.81 |
0.49 |
0.83 |
0.78 |
0.6 |
0.93 |
chr7 | 104209736 | 104215889 | chr7:104209736-104215889:+:L1PA3:REF | L1PA3 | REF | full-length | ORC5 | 0.85 |
0.88 |
0.98 |
0.97 |
0.86 |
0.88 |
0.88 |
0.89 |
0.95 |
0.92 |
0.97 |
0.96 |
chr7 | 104276530 | 104282690 | chr7:104276530-104282690:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.29 |
0.73 |
0.46 |
0.87 |
0.64 |
0.33 |
0.71 |
0.9 |
0.23 |
0.75 |
0.71 |
chr7 | 104557650 | 104563706 | chr7:104557650-104563706:-:L1PA2:REF | L1PA2 | REF | full-length | LHFPL3 | 0.07 |
0.77 |
0.72 |
0.6 |
0.4 |
0.72 |
0.7 |
0.72 |
0.86 |
0.62 |
0.68 |
0.79 |
chr7 | 104729752 | 104735841 | chr7:104729752-104735841:-:L1PA5:REF | L1PA5 | REF | full-length | LHFPL3 | 0.02 |
0.39 |
0.6 |
0.2 |
0.73 |
0.38 |
0.3 |
0.6 |
0.87 |
0.33 |
0.45 |
0.74 |
chr7 | 104864133 | 104870254 | chr7:104864133-104870254:+:L1PA4:REF | L1PA4 | REF | full-length | LHFPL3 | 0.04 |
0.39 |
0.62 |
0.07 |
0.77 |
0.54 |
0.08 |
0.58 |
0.94 |
0.19 |
0.63 |
0.35 |
chr7 | 106320178 | 106321936 | chr7:106320178-106321936:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.27 |
0.72 |
0.75 |
0.78 |
0.91 |
0.79 |
0.07 |
0.72 |
0.9 |
0.11 |
0.83 |
0.95 |
chr7 | 106684390 | 106690518 | chr7:106684390-106690518:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.66 |
0.43 |
0.8 |
0.47 |
0.83 |
0.87 |
0.26 |
0.96 |
0.85 |
0.52 |
0.87 |
0.91 |
chr7 | 106918808 | 106924960 | chr7:106918808-106924960:+:L1PA6:REF | L1PA6 | REF | full-length | PIK3CG | 0.59 |
0.95 |
0.92 |
0.04 |
0.92 |
0.85 |
0.12 |
0.93 |
0.97 |
0.93 |
0.94 |
0.99 |
chr7 | 107507907 | 107514058 | chr7:107507907-107514058:+:L1PA4:REF | L1PA4 | REF | full-length | COG5 | 0.97 |
0.96 |
0.99 |
0.98 |
0.96 |
0.99 |
0.98 |
0.95 |
0.98 |
0.96 |
0.98 |
0.99 |
chr7 | 107646332 | 107652477 | chr7:107646332-107652477:-:L1PA4:REF | L1PA4 | REF | full-length | SLC26A4-AS1 | 0.52 |
0.91 |
0.94 |
0.83 |
0.89 |
0.92 |
0.87 |
0.9 |
0.94 |
0.91 |
0.93 |
0.98 |
chr7 | 108188818 | 108188820 | chr7:108188818-108188820:+:L1HS:NONREF | L1HS | KNR | — | NRCAM | 0.85 |
0.98 |
0.97 |
0.93 |
0.26 |
0.9 |
0.86 |
— | 0.9 |
0.97 |
0.95 |
0.98 |
chr7 | 108215514 | 108218396 | chr7:108215514-108218396:-:L1P3:REF | L1P3 | REF | 3prime-truncated | NRCAM | 0.44 |
— | — | — | — | 0.81 |
0.4 |
0.55 |
— | 0.79 |
0.57 |
— |
chr7 | 108272748 | 108278897 | chr7:108272748-108278897:-:L1PA6:REF | L1PA6 | REF | full-length | NRCAM | 0.6 |
0.96 |
0.98 |
0.79 |
0.86 |
0.84 |
0.71 |
0.83 |
0.99 |
0.96 |
— | 0.98 |
chr7 | 108387569 | 108393732 | chr7:108387569-108393732:-:L1PA5:REF | L1PA5 | REF | full-length | NRCAM | 0.02 |
0.97 |
0.97 |
0.45 |
0.84 |
0.69 |
0.92 |
0.78 |
0.95 |
0.95 |
0.74 |
0.95 |
chr7 | 108937532 | 108943685 | chr7:108937532-108943685:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.59 |
0.29 |
0.26 |
0.88 |
0.61 |
0.3 |
0.52 |
0.91 |
0.17 |
0.61 |
0.95 |
chr7 | 109687136 | 109693273 | chr7:109687136-109693273:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.57 |
0.45 |
0.07 |
0.8 |
0.44 |
0.03 |
0.35 |
0.9 |
0.11 |
0.41 |
0.89 |
chr7 | 109719133 | 109725270 | chr7:109719133-109725270:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.02 |
0.88 |
0.17 |
0.84 |
0.61 |
0.38 |
— | — | 0.42 |
0.7 |
0.95 |
chr7 | 109794983 | 109801140 | chr7:109794983-109801140:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.83 |
0.57 |
0.48 |
0.8 |
0.63 |
0.3 |
0.71 |
0.9 |
0.17 |
0.7 |
0.89 |
chr7 | 109905426 | 109906019 | chr7:109905426-109906019:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.01 |
0.82 |
0.74 |
0.55 |
0.82 |
0.75 |
0.49 |
0.86 |
0.87 |
0.47 |
0.86 |
0.91 |
chr7 | 109919039 | 109925231 | chr7:109919039-109925231:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.02 |
0.78 |
0.48 |
0.33 |
0.85 |
0.54 |
0.16 |
0.74 |
0.92 |
0.15 |
0.78 |
0.98 |
chr7 | 110030129 | 110036289 | chr7:110030129-110036289:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.62 |
0.31 |
0.36 |
0.89 |
0.61 |
0.21 |
0.81 |
0.93 |
0.13 |
0.85 |
0.89 |
chr7 | 110472219 | 110478325 | chr7:110472219-110478325:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.88 |
0.83 |
0.6 |
0.93 |
0.86 |
0.7 |
0.93 |
0.92 |
0.52 |
0.94 |
0.98 |
chr7 | 110557531 | 110563563 | chr7:110557531-110563563:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.89 |
0.92 |
0.8 |
0.09 |
0.82 |
0.83 |
0.96 |
0.88 |
0.32 |
0.93 |
0.94 |
chr7 | 110707004 | 110713024 | chr7:110707004-110713024:-:L1HS:REF | L1HS | REF | full-length | IMMP2L | 0.69 |
0.96 |
0.92 |
0.93 |
0.25 |
0.94 |
0.93 |
0.95 |
0.97 |
0.56 |
0.96 |
0.98 |
chr7 | 111243515 | 111249546 | chr7:111243515-111249546:-:L1HS:REF | L1HS | REF | full-length | IMMP2L | 0.93 |
0.97 |
0.96 |
0.95 |
0.22 |
0.97 |
0.98 |
0.97 |
0.94 |
0.93 |
0.97 |
0.98 |
chr7 | 111445694 | 111451725 | chr7:111445694-111451725:+:L1PA2:REF | L1PA2 | REF | full-length | IMMP2L | — | 0.55 |
0.98 |
0.97 |
0.39 |
0.97 |
0.97 |
0.97 |
0.98 |
0.94 |
0.97 |
0.98 |
chr7 | 111499821 | 111500000 | chr7:111499821-111500000:+:L1P1:REF | L1P1 | REF | 3prime-truncated | IMMP2L | 0.95 |
0.79 |
1.0 |
— | 0.93 |
0.95 |
0.99 |
— | — | 0.97 |
0.97 |
0.98 |
chr7 | 111963193 | 111969223 | chr7:111963193-111969223:+:L1HS:REF | L1HS | REF | full-length | DOCK4 | 0.03 |
0.93 |
0.97 |
0.96 |
0.14 |
0.89 |
0.98 |
0.95 |
0.88 |
0.94 |
0.98 |
0.99 |
chr7 | 112916452 | 112921936 | chr7:112916452-112921936:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | BMT2 | 0.63 |
0.05 |
0.96 |
0.53 |
0.85 |
0.97 |
0.96 |
0.98 |
0.97 |
0.97 |
0.91 |
0.97 |
chr7 | 113257696 | 113263724 | chr7:113257696-113263724:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.53 |
0.92 |
0.65 |
0.1 |
0.82 |
0.62 |
0.94 |
0.9 |
0.47 |
0.96 |
0.98 |
chr7 | 113533338 | 113538585 | chr7:113533338-113538585:+:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.28 |
0.7 |
0.7 |
0.41 |
0.86 |
0.68 |
0.46 |
0.76 |
0.87 |
0.74 |
0.69 |
0.86 |
chr7 | 113742900 | 113748900 | chr7:113742900-113748900:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.77 |
0.85 |
0.65 |
0.13 |
0.81 |
0.87 |
0.92 |
0.91 |
0.9 |
0.95 |
0.97 |
chr7 | 113776122 | 113782152 | chr7:113776122-113782152:-:L1HS:REF | L1HS | REF | full-length | — | — | — | — | 0.73 |
— | 0.82 |
0.74 |
0.68 |
— | 0.7 |
0.8 |
0.97 |
chr7 | 115025114 | 115031115 | chr7:115025114-115031115:-:L1PA2:REF | L1PA2 | REF | full-length | MDFIC | 0.0 |
0.23 |
0.88 |
0.73 |
0.15 |
0.84 |
0.75 |
0.86 |
— | 0.86 |
0.89 |
0.94 |
chr7 | 115167768 | 115173789 | chr7:115167768-115173789:-:L1PA3:REF | L1PA3 | REF | full-length | LINC01392 | 0.02 |
0.78 |
0.97 |
0.96 |
0.93 |
0.96 |
0.87 |
0.98 |
0.98 |
0.96 |
0.98 |
0.98 |
chr7 | 116047047 | 116051301 | chr7:116047047-116051301:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.58 |
0.82 |
— | 0.92 |
— | 0.33 |
— | — | 0.83 |
0.92 |
0.92 |
chr7 | 116371251 | 116377392 | chr7:116371251-116377392:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.44 |
0.96 |
0.96 |
0.97 |
0.94 |
0.96 |
0.81 |
0.97 |
0.99 |
0.96 |
0.98 |
0.99 |
chr7 | 116408860 | 116414874 | chr7:116408860-116414874:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.81 |
— | 0.97 |
0.98 |
0.76 |
— | 0.88 |
0.99 |
0.99 |
0.86 |
0.95 |
0.99 |