Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr7 | 118122224 | 118128365 | chr7:118122224-118128365:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.02 |
0.55 |
0.88 |
0.88 |
— | 0.63 |
0.21 |
0.85 |
— | — | 0.81 |
— |
chr7 | 119586709 | 119592736 | chr7:119586709-119592736:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.49 |
0.69 |
0.85 |
0.72 |
0.65 |
0.82 |
0.83 |
0.79 |
0.96 |
0.66 |
0.92 |
0.97 |
chr7 | 119854820 | 119860951 | chr7:119854820-119860951:+:L1PA4:REF | L1PA4 | REF | full-length | LINC02476 | 0.64 |
0.18 |
0.41 |
0.25 |
0.88 |
0.58 |
0.33 |
0.67 |
0.96 |
0.27 |
0.75 |
0.99 |
chr7 | 122238520 | 122244551 | chr7:122238520-122244551:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.73 |
0.96 |
0.0 |
0.11 |
0.84 |
0.82 |
0.82 |
0.87 |
0.88 |
0.87 |
0.04 |
chr7 | 122278915 | 122284945 | chr7:122278915-122284945:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.87 |
0.94 |
0.85 |
0.03 |
0.8 |
0.44 |
0.85 |
0.8 |
0.5 |
0.68 |
0.98 |
chr7 | 123445190 | 123451212 | chr7:123445190-123451212:-:L1PA3:REF | L1PA3 | REF | full-length | IQUB | 0.21 |
0.2 |
0.8 |
0.54 |
0.78 |
0.74 |
0.57 |
0.78 |
0.95 |
0.74 |
0.85 |
0.97 |
chr7 | 123527048 | 123528341 | chr7:123527048-123528341:-:L1PA3:REF | L1PA3 | REF | 3prime-truncated | IQUB | 0.01 |
0.01 |
0.95 |
0.94 |
0.08 |
0.92 |
0.01 |
0.94 |
0.56 |
0.01 |
0.95 |
0.02 |
chr7 | 124094093 | 124100210 | chr7:124094093-124100210:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.91 |
0.91 |
0.57 |
0.86 |
0.63 |
0.37 |
0.76 |
0.81 |
0.81 |
0.94 |
0.92 |
chr7 | 124979441 | 124985490 | chr7:124979441-124985490:-:L1PA3:REF | L1PA3 | REF | full-length | POT1-AS1 | 0.35 |
0.17 |
0.6 |
0.58 |
0.59 |
0.56 |
0.63 |
0.61 |
0.75 |
0.49 |
0.65 |
0.7 |
chr7 | 125046011 | 125050112 | chr7:125046011-125050112:+:L1P3:REF | L1P3 | REF | 3prime-truncated | POT1-AS1 | 0.1 |
0.61 |
0.59 |
0.83 |
0.88 |
0.47 |
0.63 |
0.6 |
0.93 |
0.5 |
0.72 |
0.93 |
chr7 | 125179570 | 125181978 | chr7:125179570-125181978:-:L1HS:REF | L1HS | REF | 3prime-truncated | LOC101928283 | 0.02 |
0.34 |
0.81 |
0.89 |
0.06 |
0.76 |
0.76 |
0.78 |
0.93 |
0.67 |
0.71 |
0.97 |
chr7 | 126613401 | 126619522 | chr7:126613401-126619522:+:L1PA5:REF | L1PA5 | REF | full-length | GRM8 | 0.01 |
0.24 |
0.84 |
0.7 |
0.87 |
0.68 |
0.7 |
0.75 |
0.96 |
0.46 |
0.75 |
0.97 |
chr7 | 127430518 | 127430748 | chr7:127430518-127430748:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.01 |
0.88 |
0.96 |
0.08 |
0.85 |
0.61 |
0.24 |
0.61 |
0.91 |
0.91 |
0.69 |
0.94 |
chr7 | 128292011 | 128298140 | chr7:128292011-128298140:+:L1PA3:REF | L1PA3 | REF | full-length | MGC27345 | — | — | — | — | 0.82 |
— | 0.83 |
0.87 |
— | 0.8 |
0.84 |
0.87 |
chr7 | 130249390 | 130255183 | chr7:130249390-130255183:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.16 |
— | 0.92 |
0.98 |
0.64 |
0.81 |
0.76 |
0.86 |
0.98 |
0.92 |
0.83 |
— |
chr7 | 130577156 | 130577479 | chr7:130577156-130577479:+:L1PA2:REF | L1PA2 | REF | 3prime-truncated | COPG2 | — | 0.9 |
0.89 |
0.99 |
0.34 |
0.89 |
0.96 |
0.98 |
0.88 |
0.76 |
0.9 |
0.94 |
chr7 | 130632744 | 130639197 | chr7:130632744-130639197:-:L1PA7:REF | L1PA7 | REF | full-length | COPG2 | 0.96 |
0.97 |
0.95 |
0.96 |
0.94 |
0.99 |
0.98 |
0.96 |
0.94 |
0.96 |
0.86 |
0.98 |
chr7 | 130800810 | 130802983 | chr7:130800810-130802983:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
— | — | 0.62 |
— | — | 0.41 |
— | — | — | 0.53 |
— |
chr7 | 133889425 | 133895455 | chr7:133889425-133895455:-:L1PA2:REF | L1PA2 | REF | full-length | EXOC4 | 0.53 |
0.84 |
0.98 |
0.9 |
0.11 |
0.77 |
0.85 |
0.92 |
— | 0.85 |
0.97 |
0.9 |
chr7 | 136098388 | 136099692 | chr7:136098388-136099692:-:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.76 |
0.79 |
0.83 |
0.7 |
0.91 |
0.73 |
0.77 |
0.83 |
0.97 |
0.53 |
0.79 |
0.84 |
chr7 | 136414180 | 136420210 | chr7:136414180-136420210:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.07 |
0.58 |
0.71 |
0.56 |
0.24 |
0.74 |
0.73 |
0.81 |
0.82 |
0.36 |
0.81 |
0.75 |
chr7 | 136774756 | 136780783 | chr7:136774756-136780783:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.63 |
0.71 |
0.59 |
0.36 |
0.8 |
0.75 |
0.85 |
0.93 |
0.53 |
0.83 |
0.74 |
chr7 | 136831191 | 136837216 | chr7:136831191-136837216:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.62 |
0.9 |
0.82 |
0.24 |
0.88 |
0.84 |
0.92 |
0.81 |
0.66 |
0.93 |
0.88 |
chr7 | 136978456 | 136984900 | chr7:136978456-136984900:-:L1PA7:REF | L1PA7 | REF | full-length | CHRM2 | 0.03 |
0.06 |
0.93 |
0.09 |
0.95 |
0.96 |
0.04 |
1.0 |
0.96 |
0.04 |
0.98 |
0.32 |
chr7 | 137181608 | 137187601 | chr7:137181608-137187601:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.68 |
0.89 |
0.7 |
0.11 |
0.9 |
0.73 |
0.92 |
0.9 |
0.33 |
0.98 |
0.83 |
chr7 | 137424398 | 137430564 | chr7:137424398-137430564:+:L1PA3:REF | L1PA3 | REF | full-length | DGKI | 0.01 |
0.2 |
0.91 |
— | 0.9 |
0.98 |
0.52 |
0.96 |
— | 0.35 |
0.91 |
0.78 |
chr7 | 140103315 | 140109396 | chr7:140103315-140109396:-:L1PA5:REF | L1PA5 | REF | full-length | KDM7A | 0.94 |
0.98 |
0.99 |
0.98 |
0.93 |
0.98 |
0.98 |
1.0 |
0.96 |
0.97 |
0.98 |
0.98 |
chr7 | 141032606 | 141038609 | chr7:141032606-141038609:+:L1PA2:REF | L1PA2 | REF | full-length | — | — | — | — | — | 0.23 |
— | 0.71 |
— | — | 0.64 |
0.76 |
0.87 |
chr7 | 141062014 | 141068042 | chr7:141062014-141068042:-:L1HS:REF | L1HS | REF | full-length | TMEM178B | 0.2 |
0.96 |
0.96 |
0.67 |
0.12 |
0.76 |
0.83 |
0.75 |
0.89 |
0.89 |
0.85 |
0.88 |
chr7 | 141769961 | 141776086 | chr7:141769961-141776086:-:L1PA4:REF | L1PA4 | REF | full-length | TAS2R4 | 0.97 |
0.98 |
0.97 |
0.97 |
0.91 |
0.98 |
0.99 |
0.96 |
0.98 |
0.97 |
0.97 |
0.99 |
chr7 | 141920659 | 141926712 | chr7:141920659-141926712:-:L1HS:REF | L1HS | REF | full-length | CLEC5A | 0.16 |
0.89 |
0.92 |
0.68 |
0.26 |
0.59 |
0.57 |
0.73 |
0.7 |
0.62 |
0.79 |
0.92 |
chr7 | 141980085 | 141986114 | chr7:141980085-141986114:-:L1PA3:REF | L1PA3 | REF | full-length | TAS2R38 | 0.01 |
0.86 |
0.95 |
0.73 |
0.09 |
0.77 |
0.75 |
0.79 |
0.91 |
0.3 |
0.8 |
0.93 |
chr7 | 143088273 | 143094435 | chr7:143088273-143094435:+:L1PA4:REF | L1PA4 | REF | full-length | TCAF2 | 0.01 |
0.27 |
0.56 |
0.22 |
0.84 |
0.66 |
0.52 |
0.61 |
0.88 |
0.17 |
0.58 |
0.75 |
chr7 | 143160218 | 143166355 | chr7:143160218-143166355:-:L1PA5:REF | L1PA5 | REF | full-length | TCAF2 | 0.01 |
0.83 |
0.34 |
0.08 |
0.69 |
0.3 |
0.16 |
0.26 |
0.57 |
0.05 |
0.22 |
0.31 |
chr7 | 145240322 | 145242068 | chr7:145240322-145242068:-:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.01 |
0.15 |
0.5 |
— | 0.89 |
0.56 |
0.4 |
0.63 |
0.92 |
0.22 |
0.65 |
— |
chr7 | 145412976 | 145419111 | chr7:145412976-145419111:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.41 |
0.66 |
0.46 |
0.9 |
0.65 |
0.32 |
0.76 |
0.94 |
0.3 |
0.74 |
0.73 |
chr7 | 145966590 | 145972707 | chr7:145966590-145972707:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.48 |
0.18 |
0.61 |
0.56 |
0.89 |
0.67 |
0.55 |
0.66 |
0.95 |
0.24 |
0.65 |
0.77 |
chr7 | 146013558 | 146019592 | chr7:146013558-146019592:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.8 |
0.83 |
0.74 |
0.23 |
0.82 |
0.77 |
0.78 |
0.91 |
0.7 |
0.84 |
0.93 |
chr7 | 146042028 | 146043876 | chr7:146042028-146043876:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.11 |
0.19 |
0.67 |
0.49 |
— | — | 0.47 |
0.69 |
— | 0.52 |
0.67 |
0.78 |
chr7 | 146905784 | 146911817 | chr7:146905784-146911817:+:L1PA2:REF | L1PA2 | REF | full-length | CNTNAP2 | 0.02 |
0.75 |
0.95 |
0.71 |
0.14 |
0.82 |
0.78 |
0.86 |
0.96 |
0.85 |
0.82 |
0.92 |
chr7 | 146928453 | 146934611 | chr7:146928453-146934611:+:L1PA3:REF | L1PA3 | REF | full-length | CNTNAP2 | — | — | 0.95 |
— | — | — | 0.57 |
0.74 |
— | 0.48 |
0.77 |
0.64 |
chr7 | 147732040 | 147738166 | chr7:147732040-147738166:-:L1PA5:REF | L1PA5 | REF | full-length | CNTNAP2 | 0.01 |
0.6 |
0.81 |
0.53 |
0.91 |
0.77 |
0.45 |
0.79 |
0.94 |
0.64 |
0.75 |
0.82 |
chr7 | 147842591 | 147848623 | chr7:147842591-147848623:-:L1HS:REF | L1HS | REF | full-length | CNTNAP2 | 0.01 |
0.65 |
0.76 |
0.51 |
0.23 |
0.74 |
0.58 |
0.79 |
0.92 |
0.63 |
0.7 |
0.83 |
chr7 | 147862933 | 147869109 | chr7:147862933-147869109:-:L1PA6:REF | L1PA6 | REF | full-length | CNTNAP2 | 0.01 |
0.32 |
0.33 |
0.14 |
0.7 |
0.37 |
0.02 |
0.39 |
0.86 |
0.24 |
0.32 |
0.4 |
chr7 | 150574480 | 150580621 | chr7:150574480-150580621:-:L1PA4:REF | L1PA4 | REF | full-length | GIMAP4 | 0.0 |
0.43 |
0.19 |
— | 0.82 |
0.41 |
0.1 |
0.52 |
0.76 |
0.02 |
0.49 |
0.48 |
chr7 | 150597094 | 150602628 | chr7:150597094-150602628:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.0 |
0.44 |
0.37 |
0.12 |
0.83 |
0.52 |
0.05 |
0.4 |
0.79 |
0.05 |
0.44 |
0.43 |
chr7 | 150605597 | 150609905 | chr7:150605597-150609905:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.01 |
0.44 |
0.4 |
0.0 |
0.75 |
0.19 |
0.23 |
0.26 |
0.79 |
0.04 |
0.26 |
0.2 |
chr7 | 150678372 | 150680224 | chr7:150678372-150680224:+:L1P1:REF | L1P1 | REF | 3prime-truncated | GIMAP2 | 0.0 |
0.51 |
0.44 |
0.42 |
0.86 |
0.55 |
0.5 |
0.58 |
0.9 |
0.04 |
0.55 |
0.78 |
chr7 | 150706238 | 150712266 | chr7:150706238-150712266:+:L1PA3:REF | L1PA3 | REF | full-length | GIMAP1-GIMAP5 | 0.01 |
0.87 |
0.56 |
0.11 |
0.78 |
0.31 |
0.04 |
0.45 |
0.7 |
— | 0.53 |
0.48 |
chr7 | 150807555 | 150813715 | chr7:150807555-150813715:+:L1PA6:REF | L1PA6 | REF | full-length | TMEM176A | 0.03 |
0.86 |
0.45 |
0.05 |
0.94 |
0.32 |
0.56 |
0.52 |
0.88 |
0.17 |
0.65 |
0.38 |