L1MethDb

Chr	Start	End	Name	Family	Ref	Integrity	Closest gene	K562	MCF7	HEK293	HeLaS3	2102Ep	BJ	HepG2	IMR90	H1	HEK293T	MRC5	HCT116
chrY	12985911	12992021	chrY:12985911-12992021:-:L1PA4:REF	L1PA4	REF	full-length	—	—	—	—	—	0.86	0.58	0.55	—	0.88	—	0.51	—
chrY	13524018	13530054	chrY:13524018-13530054:+:L1PA3:REF	L1PA3	REF	full-length	—	—	—	—	—	0.9	0.7	0.45	—	0.92	—	0.75	—
chrY	13559272	13565292	chrY:13559272-13565292:-:L1PA2:REF	L1PA2	REF	full-length	—	—	—	—	—	0.38	0.74	0.78	—	0.92	—	0.78	—
chrY	13570712	13571198	chrY:13570712-13571198:+:L1P1:REF	L1P1	REF	3prime-truncated	—	—	—	—	—	0.89	0.45	0.41	—	0.88	—	0.44	—
chrY	13680504	13682057	chrY:13680504-13682057:+:L1PA8:REF	L1PA8	REF	3prime-truncated	—	—	—	—	—	0.78	0.34	0.0	—	0.88	—	0.2	—
chrY	13691338	13697314	chrY:13691338-13697314:+:L1PA3:REF	L1PA3	REF	full-length	TMSB4Y	—	—	—	—	0.78	—	0.2	—	—	—	0.53	—
chrY	13721945	13728094	chrY:13721945-13728094:+:L1PA4:REF	L1PA4	REF	full-length	—	—	—	—	—	0.88	0.72	0.14	—	0.91	—	0.66	—
chrY	13740720	13746742	chrY:13740720-13746742:-:L1PA3:REF	L1PA3	REF	full-length	—	—	—	—	—	0.89	0.8	0.59	—	0.98	—	0.73	—
chrY	13770703	13776733	chrY:13770703-13776733:-:L1PA2:REF	L1PA2	REF	full-length	—	—	—	—	—	0.87	0.83	0.78	—	—	—	0.75	0.68
chrY	13909274	13915419	chrY:13909274-13915419:+:L1PA3:REF	L1PA3	REF	full-length	—	—	—	—	—	0.8	0.18	0.02	—	—	—	0.09	—
chrY	13971988	13972682	chrY:13971988-13972682:-:L1PA3:REF	L1PA3	REF	3prime-truncated	—	—	—	—	—	0.61	0.58	0.02	—	0.93	—	0.51	—
chrY	14024193	14030198	chrY:14024193-14030198:-:L1PA2:REF	L1PA2	REF	full-length	—	—	—	—	—	0.65	0.61	0.54	—	—	—	0.7	—
chrY	14386183	14392046	chrY:14386183-14392046:-:L1PA3:REF	L1PA3	REF	3prime-truncated	—	—	—	—	—	0.89	0.49	0.02	—	0.91	—	0.6	—
chrY	14570605	14576724	chrY:14570605-14576724:-:L1PA4:REF	L1PA4	REF	full-length	NLGN4Y	—	—	—	—	0.88	0.96	0.99	—	—	—	0.99	—
chrY	14833585	14833877	chrY:14833585-14833877:-:L1P1:REF	L1P1	REF	3prime-truncated	NLGN4Y	—	—	—	—	0.93	0.96	0.96	—	0.92	—	0.98	—
chrY	14861128	14867059	chrY:14861128-14867059:+:L1PA3:REF	L1PA3	REF	3prime-truncated	—	—	—	—	—	0.9	0.8	0.03	—	0.97	—	0.91	—
chrY	14952755	14958959	chrY:14952755-14958959:+:L1PA3:REF	L1PA3	REF	full-length	—	—	—	—	—	0.91	0.55	0.25	—	0.91	—	0.63	—
chrY	15153009	15159054	chrY:15153009-15159054:-:L1PA3:REF	L1PA3	REF	full-length	—	—	—	—	—	0.9	0.51	0.9	—	0.93	—	0.74	—
chrY	15426061	15432072	chrY:15426061-15432072:+:L1PA3:REF	L1PA3	REF	full-length	—	—	—	—	—	0.91	0.98	0.89	—	0.92	—	0.98	—
chrY	15530102	15532391	chrY:15530102-15532391:-:L1PA6:REF	L1PA6	REF	3prime-truncated	—	—	—	—	—	0.88	0.9	0.04	—	—	—	0.95	—
chrY	15722321	15728344	chrY:15722321-15728344:-:L1PA3:REF	L1PA3	REF	full-length	—	—	—	—	—	0.88	0.63	0.03	—	0.95	—	0.78	—
chrY	15742349	15748477	chrY:15742349-15748477:-:L1PA5:REF	L1PA5	REF	full-length	—	—	—	—	—	0.88	0.29	0.18	—	0.76	—	0.89	—
chrY	16217866	16224003	chrY:16217866-16224003:-:L1PA4:REF	L1PA4	REF	full-length	—	—	—	—	—	—	—	0.59	—	—	—	0.58	—
chrY	16427017	16433089	chrY:16427017-16433089:+:L1PA3:REF	L1PA3	REF	full-length	—	—	—	—	—	0.75	0.2	0.02	—	0.88	—	0.25	—
chrY	16747134	16753486	chrY:16747134-16753486:-:L1PA7:REF	L1PA7	REF	full-length	—	—	—	—	—	0.7	0.36	0.3	—	0.89	—	0.22	—
chrY	16985042	16991073	chrY:16985042-16991073:+:L1PA3:REF	L1PA3	REF	full-length	—	—	—	—	—	0.8	0.49	0.09	—	0.93	—	0.57	—
chrY	17060920	17066963	chrY:17060920-17066963:-:L1PA2:REF	L1PA2	REF	full-length	—	—	—	—	—	0.2	0.75	0.66	—	0.95	—	0.93	—
chrY	17311632	17317724	chrY:17311632-17317724:+:L1PA4:REF	L1PA4	REF	full-length	—	—	—	—	—	0.75	0.26	0.02	—	0.81	—	0.78	—
chrY	17708355	17714504	chrY:17708355-17714504:+:L1PA3:REF	L1PA3	REF	full-length	—	—	—	—	—	0.73	0.49	0.16	—	0.69	—	0.51	—
chrY	18191509	18197658	chrY:18191509-18197658:-:L1PA3:REF	L1PA3	REF	full-length	—	—	—	—	—	0.68	—	0.17	—	0.72	—	0.49	—
chrY	18893898	18899933	chrY:18893898-18899933:+:L1PA3:REF	L1PA3	REF	full-length	TTTY14	—	—	—	—	0.9	0.97	0.81	—	0.88	—	0.97	—
chrY	19034631	19038436	chrY:19034631-19038436:+:L1HS:REF	L1HS	REF	3prime-truncated	TTTY14	—	—	—	—	0.79	0.8	0.71	—	0.15	—	0.36	—
chrY	19230409	19232952	chrY:19230409-19232952:-:L1P1:REF	L1P1	REF	3prime-truncated	—	—	—	—	—	0.84	0.23	0.0	—	0.76	—	0.32	—
chrY	19373283	19379312	chrY:19373283-19379312:-:L1PA2:REF	L1PA2	REF	full-length	—	—	—	—	—	0.14	0.73	0.94	—	—	—	0.81	—
chrY	19413656	19419018	chrY:19413656-19419018:-:L1PA3:REF	L1PA3	REF	3prime-truncated	—	—	—	—	—	0.92	0.63	0.5	—	0.89	—	0.66	—
chrY	19631690	19635004	chrY:19631690-19635004:-:L1P1:REF	L1P1	REF	3prime-truncated	—	—	—	—	—	0.65	0.15	0.45	—	0.45	—	0.35	—
chrY	19750332	19754110	chrY:19750332-19754110:-:L1PA12:REF	L1PA12	REF	3prime-truncated	KDM5D	—	—	—	—	0.82	0.86	0.09	—	0.89	—	0.87	—
chrY	20030942	20037076	chrY:20030942-20037076:+:L1PA3:REF	L1PA3	REF	full-length	—	—	—	—	—	0.72	0.53	0.72	—	0.83	—	0.28	—
chrY	20042979	20043855	chrY:20042979-20043855:-:L1P3:REF	L1P3	REF	3prime-truncated	—	—	—	—	—	0.54	0.33	0.38	—	0.84	—	0.07	—
chrY	20380425	20386697	chrY:20380425-20386697:-:L1PA3:REF	L1PA3	REF	full-length	—	—	—	—	—	0.68	0.34	0.5	—	0.62	—	0.22	—
chrY	20457288	20463400	chrY:20457288-20463400:-:L1PA5:REF	L1PA5	REF	full-length	TTTY10	—	—	—	—	0.73	0.5	0.49	—	0.55	—	0.41	—
chrY	20817541	20818479	chrY:20817541-20818479:+:L1P2:REF	L1P2	REF	3prime-truncated	—	—	—	—	—	0.74	0.11	0.0	—	0.5	—	0.14	—
chrY	20843711	20848827	chrY:20843711-20848827:-:L1PA7:REF	L1PA7	REF	3prime-truncated	—	—	—	—	—	0.82	0.21	0.01	—	0.5	—	0.29	—
chrY	20867003	20868297	chrY:20867003-20868297:-:L1PA4:REF	L1PA4	REF	3prime-truncated	—	—	—	—	—	0.37	0.0	0.0	—	0.06	—	0.01	—
chrY	20919912	20926008	chrY:20919912-20926008:-:L1PA4:REF	L1PA4	REF	full-length	—	—	—	—	—	0.57	0.35	0.0	—	0.62	—	0.49	—
chrY	20944133	20950163	chrY:20944133-20950163:-:L1PA2:REF	L1PA2	REF	full-length	—	—	—	—	—	0.82	0.41	0.43	—	0.78	—	0.47	—
chrY	21063741	21069758	chrY:21063741-21069758:+:L1PA2:REF	L1PA2	REF	full-length	—	—	—	—	—	0.81	0.34	0.23	—	0.65	—	0.12	—
chrY	21123535	21129642	chrY:21123535-21129642:-:L1PA5:REF	L1PA5	REF	full-length	—	—	—	—	—	0.62	0.19	0.0	—	0.49	—	0.19	—
chrY	22339612	22345645	chrY:22339612-22345645:-:L1PA2:REF	L1PA2	REF	full-length	RBMY1F	—	—	—	—	0.63	0.82	0.71	—	0.89	—	0.81	—
chrY	26601787	26607911	chrY:26601787-26607911:+:L1PA3:REF	L1PA3	REF	full-length	—	—	—	—	—	0.75	0.28	0.0	—	0.3	—	0.08	—

Showing 4701 to 4750 of 4750 entries