Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr5 | 21107412 | 21113430 | chr5:21107412-21113430:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.07 |
0.68 |
0.83 |
0.79 |
0.08 |
0.83 |
0.86 |
0.8 |
— | 0.55 |
0.82 |
— |
chr5 | 24654721 | 24660895 | chr5:24654721-24660895:-:L1PA6:REF | L1PA6 | REF | full-length | CDH10 | 0.0 |
0.44 |
0.31 |
0.78 |
0.91 |
0.21 |
0.02 |
0.35 |
0.87 |
0.58 |
0.19 |
0.95 |
chr5 | 25077653 | 25083685 | chr5:25077653-25083685:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.16 |
0.86 |
— | 0.11 |
0.8 |
0.59 |
0.84 |
0.96 |
0.01 |
0.86 |
0.98 |
chr5 | 25113737 | 25119754 | chr5:25113737-25119754:-:L1PA2:REF | L1PA2 | REF | full-length | LINC02228 | 0.12 |
0.42 |
0.65 |
0.87 |
0.23 |
0.77 |
0.66 |
0.79 |
0.89 |
0.72 |
0.86 |
0.95 |
chr5 | 25378529 | 25384556 | chr5:25378529-25384556:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.56 |
0.82 |
0.87 |
0.29 |
0.73 |
0.47 |
0.77 |
0.86 |
0.71 |
0.8 |
0.96 |
chr5 | 28798790 | 28804814 | chr5:28798790-28804814:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.38 |
0.77 |
0.85 |
0.87 |
0.59 |
0.8 |
0.72 |
0.8 |
0.95 |
0.8 |
0.86 |
0.88 |
chr5 | 29191266 | 29192108 | chr5:29191266-29192108:-:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.02 |
0.25 |
0.51 |
0.14 |
— | 0.74 |
0.21 |
0.64 |
0.67 |
0.09 |
0.75 |
0.98 |
chr5 | 30423377 | 30429507 | chr5:30423377-30429507:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.05 |
0.6 |
0.92 |
0.24 |
0.67 |
0.45 |
0.82 |
0.71 |
0.4 |
0.81 |
0.96 |
chr5 | 30496098 | 30499978 | chr5:30496098-30499978:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.0 |
0.85 |
0.28 |
0.87 |
0.91 |
0.24 |
0.93 |
0.55 |
1.0 |
0.01 |
0.37 |
0.89 |
chr5 | 30817969 | 30823996 | chr5:30817969-30823996:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.6 |
0.84 |
0.71 |
0.24 |
0.82 |
0.6 |
0.94 |
0.97 |
0.58 |
0.93 |
0.89 |
chr5 | 33539828 | 33546021 | chr5:33539828-33546021:+:L1PA6:REF | L1PA6 | REF | full-length | ADAMTS12 | 0.01 |
0.94 |
0.82 |
0.4 |
0.91 |
0.96 |
0.67 |
0.91 |
0.9 |
0.63 |
0.98 |
0.85 |
chr5 | 33568655 | 33574761 | chr5:33568655-33574761:+:L1PA3:REF | L1PA3 | REF | full-length | ADAMTS12 | 0.01 |
0.85 |
0.86 |
0.44 |
0.93 |
0.92 |
0.77 |
0.95 |
0.96 |
0.44 |
0.98 |
0.81 |
chr5 | 34147845 | 34154031 | chr5:34147845-34154031:+:L1HS:REF | L1HS | REF | full-length | C1QTNF3 | 0.95 |
0.97 |
0.97 |
0.98 |
0.11 |
0.97 |
0.98 |
0.96 |
0.91 |
0.93 |
0.98 |
0.98 |
chr5 | 35075072 | 35081201 | chr5:35075072-35081201:+:L1PA5:REF | L1PA5 | REF | full-length | PRLR | 0.01 |
0.88 |
0.9 |
0.1 |
0.88 |
0.93 |
— | 0.83 |
0.77 |
0.41 |
0.89 |
0.54 |
chr5 | 35256058 | 35262086 | chr5:35256058-35262086:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.95 |
0.92 |
0.49 |
0.87 |
0.82 |
0.84 |
0.78 |
0.91 |
0.64 |
0.73 |
0.57 |
chr5 | 35494184 | 35500000 | chr5:35494184-35500000:+:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.01 |
0.9 |
0.92 |
0.69 |
0.95 |
0.87 |
0.95 |
0.85 |
0.96 |
0.62 |
0.84 |
0.84 |
chr5 | 35568225 | 35574246 | chr5:35568225-35574246:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.92 |
0.77 |
0.7 |
0.88 |
0.86 |
0.85 |
0.77 |
0.9 |
0.44 |
0.82 |
0.88 |
chr5 | 35911739 | 35917876 | chr5:35911739-35917876:+:L1PA4:REF | L1PA4 | REF | full-length | CAPSL | 0.0 |
0.83 |
0.91 |
0.71 |
0.87 |
0.72 |
0.49 |
0.72 |
0.97 |
0.4 |
0.72 |
0.73 |
chr5 | 36184263 | 36190366 | chr5:36184263-36190366:-:L1PA5:REF | L1PA5 | REF | full-length | SKP2 | 0.96 |
0.98 |
0.97 |
0.97 |
0.91 |
0.99 |
0.98 |
0.98 |
0.98 |
0.96 |
0.99 |
0.98 |
chr5 | 36508021 | 36514170 | chr5:36508021-36514170:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.13 |
0.94 |
0.92 |
0.94 |
0.77 |
0.97 |
0.92 |
0.96 |
0.95 |
0.94 |
0.6 |
0.96 |
chr5 | 38169496 | 38175529 | chr5:38169496-38175529:-:L1PA3:REF | L1PA3 | REF | full-length | LINC02107 | 0.16 |
0.94 |
0.95 |
0.87 |
0.87 |
0.91 |
0.98 |
0.92 |
0.96 |
0.93 |
0.91 |
0.98 |
chr5 | 38625599 | 38631747 | chr5:38625599-38631747:-:L1PA3:REF | L1PA3 | REF | full-length | LIFR-AS1 | 0.31 |
0.91 |
0.92 |
0.93 |
0.86 |
0.85 |
0.79 |
0.92 |
0.93 |
0.92 |
0.96 |
0.97 |
chr5 | 39034329 | 39040476 | chr5:39034329-39040476:+:L1PA4:REF | L1PA4 | REF | full-length | RICTOR | 0.97 |
0.5 |
0.96 |
0.98 |
0.93 |
0.97 |
0.9 |
0.93 |
0.98 |
0.96 |
0.98 |
0.98 |
chr5 | 39343059 | 39349181 | chr5:39343059-39349181:+:L1PA5:REF | L1PA5 | REF | full-length | C9 | 0.12 |
0.48 |
0.73 |
0.79 |
0.85 |
0.69 |
0.61 |
0.81 |
0.86 |
0.54 |
0.87 |
0.91 |
chr5 | 39787652 | 39793671 | chr5:39787652-39793671:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.06 |
0.97 |
0.88 |
0.97 |
0.11 |
0.95 |
0.77 |
0.95 |
0.97 |
— | 0.96 |
0.98 |
chr5 | 40541305 | 40547335 | chr5:40541305-40547335:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.95 |
0.96 |
0.96 |
0.29 |
0.93 |
0.9 |
0.97 |
0.98 |
0.78 |
0.97 |
0.98 |
chr5 | 40565244 | 40567520 | chr5:40565244-40567520:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.0 |
0.7 |
0.7 |
0.72 |
0.64 |
0.79 |
0.44 |
0.72 |
0.96 |
0.31 |
0.58 |
0.73 |
chr5 | 41205257 | 41211396 | chr5:41205257-41211396:+:L1PA5:REF | L1PA5 | REF | full-length | C6 | 0.03 |
0.45 |
0.67 |
0.27 |
0.64 |
0.48 |
0.71 |
0.93 |
— | 0.4 |
0.52 |
0.85 |
chr5 | 41487919 | 41494088 | chr5:41487919-41494088:-:L1PA3:REF | L1PA3 | REF | full-length | PLCXD3 | 0.01 |
0.7 |
0.77 |
0.52 |
0.7 |
0.72 |
0.65 |
0.79 |
0.88 |
0.39 |
0.76 |
0.93 |
chr5 | 42254239 | 42260389 | chr5:42254239-42260389:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.77 |
0.84 |
0.43 |
0.91 |
0.81 |
0.74 |
0.84 |
0.94 |
0.65 |
0.77 |
0.97 |
chr5 | 42412311 | 42418555 | chr5:42412311-42418555:-:L1PA6:REF | L1PA6 | REF | full-length | GHR | 0.02 |
0.84 |
0.8 |
0.01 |
0.71 |
0.52 |
0.16 |
0.52 |
— | 0.6 |
0.46 |
0.96 |
chr5 | 42476884 | 42483030 | chr5:42476884-42483030:-:L1PA4:REF | L1PA4 | REF | full-length | GHR | 0.0 |
0.94 |
0.84 |
0.27 |
0.93 |
0.8 |
0.72 |
0.84 |
0.95 |
0.81 |
0.77 |
0.97 |
chr5 | 42659631 | 42665759 | chr5:42659631-42665759:+:L1PA3:REF | L1PA3 | REF | full-length | GHR | 0.02 |
0.54 |
0.68 |
0.25 |
0.73 |
0.81 |
0.55 |
0.77 |
0.87 |
0.64 |
0.62 |
0.81 |
chr5 | 42734714 | 42740780 | chr5:42734714-42740780:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.89 |
0.92 |
0.67 |
0.1 |
0.9 |
0.85 |
0.85 |
0.93 |
0.69 |
0.8 |
0.98 |
chr5 | 42931680 | 42937866 | chr5:42931680-42937866:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.36 |
0.11 |
0.85 |
0.78 |
0.82 |
0.8 |
0.77 |
0.81 |
0.87 |
0.75 |
0.91 |
0.93 |
chr5 | 43260613 | 43266748 | chr5:43260613-43266748:-:L1PA5:REF | L1PA5 | REF | full-length | NIM1K | 0.37 |
0.93 |
0.86 |
0.78 |
0.87 |
0.8 |
0.43 |
0.73 |
0.96 |
0.69 |
0.84 |
0.96 |
chr5 | 43340769 | 43344359 | chr5:43340769-43344359:+:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.6 |
0.96 |
0.88 |
0.81 |
0.8 |
0.83 |
0.81 |
0.75 |
0.91 |
0.64 |
0.83 |
0.97 |
chr5 | 43402548 | 43408647 | chr5:43402548-43408647:+:L1PA5:REF | L1PA5 | REF | full-length | CCL28 | — | — | — | 0.22 |
0.4 |
0.75 |
0.03 |
0.56 |
— | 0.74 |
0.85 |
— |
chr5 | 43717953 | 43723974 | chr5:43717953-43723974:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.24 |
0.96 |
0.95 |
0.91 |
0.9 |
0.96 |
0.91 |
0.98 |
0.95 |
0.85 |
0.99 |
0.98 |
chr5 | 44040911 | 44044131 | chr5:44040911-44044131:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.01 |
0.94 |
0.05 |
0.6 |
0.88 |
0.39 |
0.14 |
0.58 |
0.82 |
0.03 |
0.83 |
0.95 |
chr5 | 44578944 | 44584955 | chr5:44578944-44584955:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.93 |
0.45 |
0.77 |
0.94 |
0.67 |
0.5 |
0.72 |
0.89 |
0.39 |
0.73 |
0.96 |
chr5 | 44668502 | 44674529 | chr5:44668502-44674529:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.97 |
0.64 |
0.95 |
0.89 |
0.67 |
0.63 |
0.67 |
0.89 |
0.48 |
0.68 |
0.9 |
chr5 | 45346381 | 45352534 | chr5:45346381-45352534:+:L1PA3:REF | L1PA3 | REF | full-length | HCN1 | 0.01 |
0.3 |
0.22 |
— | 0.68 |
0.3 |
0.02 |
0.26 |
0.87 |
0.04 |
0.3 |
0.97 |
chr5 | 45444894 | 45447243 | chr5:45444894-45447243:+:L1P1:REF | L1P1 | REF | 3prime-truncated | HCN1 | 0.01 |
0.52 |
0.76 |
0.57 |
0.76 |
0.65 |
0.75 |
0.63 |
0.94 |
0.55 |
0.67 |
0.84 |
chr5 | 45493599 | 45499615 | chr5:45493599-45499615:-:L1PA3:REF | L1PA3 | REF | full-length | HCN1 | 0.03 |
0.77 |
0.83 |
0.6 |
0.92 |
0.72 |
0.72 |
0.79 |
0.98 |
0.54 |
0.74 |
0.98 |
chr5 | 45580536 | 45586672 | chr5:45580536-45586672:-:L1PA4:REF | L1PA4 | REF | full-length | HCN1 | 0.01 |
0.31 |
0.52 |
0.21 |
0.86 |
0.63 |
0.57 |
0.62 |
0.96 |
0.41 |
0.6 |
0.97 |
chr5 | 45658440 | 45664470 | chr5:45658440-45664470:+:L1PA2:REF | L1PA2 | REF | full-length | HCN1 | 0.04 |
0.72 |
0.8 |
0.76 |
0.41 |
0.83 |
0.73 |
0.82 |
0.93 |
0.6 |
0.79 |
0.97 |
chr5 | 45743085 | 45749194 | chr5:45743085-45749194:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.17 |
0.38 |
0.38 |
0.87 |
0.6 |
0.48 |
0.61 |
0.88 |
0.31 |
0.6 |
0.95 |
chr5 | 45786144 | 45792292 | chr5:45786144-45792292:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.24 |
0.11 |
0.06 |
0.8 |
0.28 |
0.03 |
0.41 |
0.76 |
0.01 |
0.28 |
0.86 |
chr5 | 45832860 | 45838845 | chr5:45832860-45838845:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.51 |
0.4 |
0.33 |
0.88 |
0.51 |
0.43 |
0.62 |
0.78 |
0.19 |
0.48 |
0.94 |