Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr6 | 81433358 | 81436998 | chr6:81433358-81436998:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.01 |
0.93 |
0.47 |
0.77 |
0.79 |
0.8 |
0.56 |
0.66 |
0.78 |
0.21 |
0.59 |
0.83 |
chr6 | 81869293 | 81875745 | chr6:81869293-81875745:+:L1PA7:REF | L1PA7 | REF | full-length | LINC02542 | 0.06 |
0.92 |
0.91 |
0.95 |
0.87 |
0.96 |
0.94 |
0.78 |
0.97 |
0.69 |
0.75 |
0.95 |
chr6 | 81953035 | 81959176 | chr6:81953035-81959176:-:L1PA5:REF | L1PA5 | REF | full-length | LINC02542 | 0.17 |
0.94 |
0.83 |
0.93 |
0.93 |
0.92 |
0.91 |
0.83 |
0.98 |
0.57 |
0.83 |
0.97 |
chr6 | 82101303 | 82107312 | chr6:82101303-82107312:+:L1PA2:REF | L1PA2 | REF | full-length | LINC02542 | 0.02 |
0.24 |
0.95 |
0.94 |
0.13 |
0.92 |
0.06 |
0.88 |
0.94 |
0.1 |
0.84 |
0.98 |
chr6 | 82150919 | 82152109 | chr6:82150919-82152109:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.46 |
0.97 |
0.86 |
0.9 |
0.62 |
0.81 |
0.78 |
0.87 |
0.89 |
0.67 |
0.63 |
1.0 |
chr6 | 82469506 | 82475649 | chr6:82469506-82475649:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.03 |
0.61 |
0.63 |
0.49 |
0.63 |
0.6 |
0.18 |
0.59 |
0.77 |
0.4 |
0.46 |
0.73 |
chr6 | 82558403 | 82564423 | chr6:82558403-82564423:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.98 |
0.97 |
0.8 |
0.25 |
0.92 |
0.68 |
0.85 |
0.9 |
0.65 |
0.83 |
0.96 |
chr6 | 83333952 | 83339981 | chr6:83333952-83339981:+:L1HS:REF | L1HS | REF | full-length | ME1 | 0.89 |
0.8 |
0.98 |
0.97 |
0.18 |
0.96 |
0.84 |
0.96 |
0.94 |
0.49 |
0.98 |
0.99 |
chr6 | 83495670 | 83500000 | chr6:83495670-83500000:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.1 |
0.94 |
0.93 |
0.76 |
0.91 |
0.8 |
0.62 |
0.9 |
0.94 |
0.91 |
0.8 |
0.97 |
chr6 | 84133994 | 84134809 | chr6:84133994-84134809:-:L1P3:REF | L1P3 | REF | 3prime-truncated | CEP162 | — | — | — | — | — | — | — | 1.0 |
— | — | 0.1 |
— |
chr6 | 84626355 | 84632366 | chr6:84626355-84632366:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.2 |
0.88 |
— | 0.1 |
0.98 |
0.85 |
0.93 |
0.93 |
0.83 |
0.97 |
0.92 |
chr6 | 85307045 | 85313201 | chr6:85307045-85313201:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.55 |
0.57 |
0.44 |
0.58 |
0.54 |
0.4 |
0.55 |
— | 0.42 |
0.49 |
0.68 |
chr6 | 85377220 | 85380046 | chr6:85377220-85380046:+:L1P1:REF | L1P1 | REF | 3prime-truncated | LINC02535 | 0.01 |
0.83 |
0.84 |
0.81 |
0.88 |
0.88 |
0.64 |
0.87 |
0.89 |
0.59 |
0.89 |
0.87 |
chr6 | 85751661 | 85755015 | chr6:85751661-85755015:+:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.01 |
0.89 |
0.72 |
0.06 |
0.93 |
0.7 |
0.59 |
0.64 |
0.78 |
0.37 |
— | 0.95 |
chr6 | 85815945 | 85822083 | chr6:85815945-85822083:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.74 |
0.33 |
0.16 |
0.87 |
0.52 |
0.28 |
0.61 |
0.81 |
0.09 |
0.67 |
0.85 |
chr6 | 85857293 | 85863437 | chr6:85857293-85863437:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.79 |
0.77 |
0.45 |
0.84 |
0.7 |
0.38 |
0.82 |
0.79 |
0.21 |
0.82 |
0.61 |
chr6 | 85895195 | 85897108 | chr6:85895195-85897108:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.0 |
0.74 |
0.0 |
0.03 |
0.91 |
0.25 |
0.06 |
0.45 |
0.53 |
0.0 |
0.12 |
0.33 |
chr6 | 85930759 | 85936589 | chr6:85930759-85936589:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.0 |
0.75 |
0.18 |
0.3 |
0.79 |
0.51 |
0.19 |
0.58 |
0.64 |
0.07 |
0.57 |
0.58 |
chr6 | 85952904 | 85959050 | chr6:85952904-85959050:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.53 |
0.35 |
0.03 |
0.79 |
0.36 |
0.18 |
0.48 |
0.79 |
0.02 |
0.46 |
0.29 |
chr6 | 86021488 | 86027515 | chr6:86021488-86027515:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.8 |
0.73 |
0.46 |
0.27 |
0.7 |
0.69 |
0.67 |
0.87 |
0.44 |
0.72 |
0.87 |
chr6 | 86253380 | 86253650 | chr6:86253380-86253650:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | — | — | 0.28 |
— | 0.88 |
0.48 |
— | 0.54 |
— | 0.08 |
— | — |
chr6 | 86492121 | 86498254 | chr6:86492121-86498254:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.02 |
0.76 |
0.29 |
0.26 |
0.82 |
0.43 |
0.34 |
0.39 |
0.69 |
0.14 |
0.41 |
0.49 |
chr6 | 86569573 | 86575720 | chr6:86569573-86575720:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.9 |
0.51 |
0.21 |
0.89 |
0.55 |
0.43 |
0.66 |
0.88 |
0.21 |
0.63 |
0.65 |
chr6 | 86665208 | 86671238 | chr6:86665208-86671238:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.43 |
0.93 |
0.58 |
0.29 |
0.84 |
0.62 |
0.42 |
0.65 |
0.88 |
0.24 |
0.68 |
0.76 |
chr6 | 86731396 | 86732970 | chr6:86731396-86732970:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | — | 0.86 |
0.58 |
— | 0.93 |
0.57 |
0.58 |
0.58 |
— | 0.47 |
0.65 |
0.67 |
chr6 | 86806663 | 86812682 | chr6:86806663-86812682:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.89 |
0.68 |
0.6 |
0.35 |
0.75 |
0.78 |
0.77 |
0.76 |
0.47 |
0.74 |
0.8 |
chr6 | 86812682 | 86816094 | chr6:86812682-86816094:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
— | 0.06 |
0.09 |
0.61 |
0.42 |
0.08 |
0.37 |
0.83 |
0.07 |
0.23 |
0.21 |
chr6 | 86872827 | 86876086 | chr6:86872827-86876086:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.01 |
0.61 |
0.55 |
0.32 |
0.87 |
0.7 |
0.31 |
0.69 |
0.83 |
0.13 |
0.7 |
0.83 |
chr6 | 86897717 | 86903738 | chr6:86897717-86903738:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.0 |
0.59 |
0.69 |
0.58 |
— | 0.68 |
0.7 |
0.66 |
0.69 |
0.56 |
0.59 |
0.88 |
chr6 | 86921165 | 86927317 | chr6:86921165-86927317:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.89 |
0.68 |
0.23 |
0.75 |
0.53 |
0.4 |
0.54 |
0.82 |
0.36 |
0.48 |
0.37 |
chr6 | 87139685 | 87145758 | chr6:87139685-87145758:+:L1PA6:REF | L1PA6 | REF | full-length | ZNF292 | 0.05 |
0.33 |
0.68 |
0.1 |
0.86 |
0.7 |
0.29 |
0.81 |
0.89 |
0.42 |
0.68 |
0.3 |
chr6 | 87323278 | 87329278 | chr6:87323278-87329278:-:L1PA3:REF | L1PA3 | REF | full-length | GJB7 | 0.91 |
0.71 |
0.94 |
0.42 |
0.09 |
0.97 |
0.97 |
0.88 |
0.88 |
0.45 |
0.97 |
0.98 |
chr6 | 88253620 | 88259773 | chr6:88253620-88259773:+:L1PA6:REF | L1PA6 | REF | full-length | — | — | — | 0.81 |
— | — | — | — | 0.63 |
— | — | 0.66 |
— |
chr6 | 88350814 | 88352662 | chr6:88350814-88352662:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.43 |
0.49 |
0.77 |
— | 0.83 |
0.75 |
0.66 |
0.7 |
0.85 |
0.4 |
0.67 |
0.8 |
chr6 | 89225263 | 89231287 | chr6:89225263-89231287:-:L1PA2:REF | L1PA2 | REF | full-length | GABRR1 | 0.29 |
0.95 |
0.96 |
0.87 |
0.13 |
0.86 |
0.89 |
0.87 |
0.88 |
0.87 |
0.89 |
0.98 |
chr6 | 90053981 | 90060141 | chr6:90053981-90060141:+:L1PA4:REF | L1PA4 | REF | full-length | BACH2 | 0.39 |
0.67 |
0.96 |
0.61 |
0.85 |
0.9 |
0.81 |
0.89 |
0.97 |
0.94 |
0.86 |
0.92 |
chr6 | 90733744 | 90740207 | chr6:90733744-90740207:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.05 |
0.51 |
0.0 |
0.34 |
0.06 |
0.02 |
0.34 |
0.64 |
0.88 |
0.11 |
0.91 |
chr6 | 91047151 | 91053161 | chr6:91047151-91053161:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.87 |
0.96 |
0.57 |
0.1 |
0.72 |
0.67 |
0.77 |
0.92 |
0.21 |
0.87 |
0.98 |
chr6 | 91589964 | 91591707 | chr6:91589964-91591707:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.02 |
0.82 |
0.82 |
0.98 |
0.87 |
0.76 |
0.92 |
0.91 |
0.82 |
0.92 |
0.81 |
0.98 |
chr6 | 93631588 | 93637609 | chr6:93631588-93637609:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.09 |
0.93 |
0.98 |
0.95 |
0.05 |
0.89 |
0.87 |
0.91 |
0.96 |
0.76 |
0.91 |
0.96 |
chr6 | 93865738 | 93871783 | chr6:93865738-93871783:-:L1HS:REF | L1HS | REF | full-length | — | 0.01 |
0.78 |
0.89 |
0.88 |
0.21 |
0.68 |
0.79 |
0.8 |
0.88 |
0.75 |
0.75 |
0.82 |
chr6 | 94197995 | 94204060 | chr6:94197995-94204060:-:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.73 |
0.88 |
0.8 |
0.08 |
0.84 |
0.79 |
0.9 |
0.96 |
0.85 |
0.88 |
0.99 |
chr6 | 94824163 | 94830307 | chr6:94824163-94830307:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.81 |
0.83 |
0.78 |
0.61 |
0.75 |
0.62 |
0.86 |
0.95 |
0.84 |
0.85 |
0.98 |
chr6 | 94851129 | 94857158 | chr6:94851129-94857158:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.45 |
0.7 |
0.72 |
0.85 |
0.73 |
0.76 |
0.77 |
0.96 |
0.81 |
0.82 |
0.98 |
chr6 | 94869039 | 94874443 | chr6:94869039-94874443:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.04 |
0.32 |
0.58 |
0.21 |
0.61 |
0.28 |
0.22 |
0.62 |
0.92 |
0.53 |
0.64 |
0.97 |
chr6 | 95453247 | 95454707 | chr6:95453247-95454707:-:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.0 |
0.66 |
0.0 |
0.08 |
0.81 |
0.11 |
0.02 |
0.12 |
— | 0.34 |
0.17 |
1.0 |
chr6 | 96478157 | 96479355 | chr6:96478157-96479355:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
0.97 |
0.4 |
0.07 |
0.87 |
0.45 |
0.02 |
0.68 |
0.97 |
0.13 |
0.53 |
0.97 |
chr6 | 96500000 | 96500444 | chr6:96500000-96500444:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.36 |
— | 0.92 |
0.57 |
— | 0.81 |
0.95 |
0.94 |
— | 0.76 |
0.9 |
— |
chr6 | 96982567 | 96987020 | chr6:96982567-96987020:-:L1P1:REF | L1P1 | REF | 3prime-truncated | KLHL32 | 0.11 |
0.53 |
0.84 |
0.52 |
0.82 |
0.7 |
0.48 |
0.52 |
0.93 |
0.55 |
0.73 |
0.97 |
chr6 | 97376538 | 97382707 | chr6:97376538-97382707:-:L1PA3:REF | L1PA3 | REF | full-length | LOC101927314 | 0.02 |
0.59 |
0.9 |
0.41 |
0.81 |
0.72 |
0.36 |
0.74 |
0.94 |
0.84 |
0.77 |
0.97 |