Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr7 | 18985072 | 18991069 | chr7:18985072-18991069:-:L1PA3:REF | L1PA3 | REF | full-length | HDAC9 | 0.03 |
0.66 |
0.9 |
0.72 |
0.86 |
0.99 |
0.71 |
0.99 |
0.95 |
0.95 |
0.98 |
0.98 |
chr7 | 19877681 | 19883794 | chr7:19877681-19883794:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.07 |
0.9 |
0.82 |
0.85 |
0.84 |
0.76 |
0.41 |
0.71 |
0.97 |
0.67 |
0.83 |
0.9 |
chr7 | 19883968 | 19890109 | chr7:19883968-19890109:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.91 |
0.71 |
0.71 |
0.88 |
0.79 |
0.24 |
0.78 |
0.95 |
0.54 |
0.84 |
0.99 |
chr7 | 20067809 | 20073950 | chr7:20067809-20073950:+:L1PA3:REF | L1PA3 | REF | full-length | LOC101927668 | 0.05 |
0.95 |
0.96 |
0.93 |
0.96 |
0.96 |
0.84 |
0.94 |
0.98 |
0.92 |
0.96 |
0.99 |
chr7 | 22528296 | 22534331 | chr7:22528296-22534331:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.87 |
0.95 |
0.96 |
0.86 |
0.62 |
0.9 |
0.86 |
0.91 |
0.92 |
0.94 |
0.95 |
0.98 |
chr7 | 23035734 | 23039855 | chr7:23035734-23039855:+:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.45 |
0.79 |
0.96 |
0.73 |
0.22 |
0.9 |
0.93 |
0.9 |
0.9 |
— | 0.94 |
0.97 |
chr7 | 23321058 | 23327074 | chr7:23321058-23327074:+:L1PA3:REF | L1PA3 | REF | full-length | IGF2BP3 | 0.84 |
0.48 |
0.98 |
0.87 |
0.93 |
0.83 |
0.92 |
0.99 |
0.99 |
0.98 |
0.98 |
0.97 |
chr7 | 23822602 | 23828742 | chr7:23822602-23828742:-:L1PA4:REF | L1PA4 | REF | full-length | STK31 | 0.62 |
0.6 |
0.79 |
0.77 |
0.76 |
0.71 |
0.64 |
0.79 |
0.86 |
0.74 |
0.7 |
0.83 |
chr7 | 23844558 | 23847393 | chr7:23844558-23847393:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.05 |
0.13 |
0.82 |
0.88 |
0.9 |
0.48 |
0.13 |
0.6 |
0.94 |
0.69 |
0.65 |
0.94 |
chr7 | 23947171 | 23953317 | chr7:23947171-23953317:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.09 |
0.48 |
0.64 |
0.98 |
0.91 |
0.78 |
0.69 |
0.7 |
0.97 |
0.61 |
0.77 |
0.96 |
chr7 | 24116922 | 24118569 | chr7:24116922-24118569:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.01 |
0.14 |
0.82 |
0.95 |
0.94 |
0.48 |
0.56 |
0.57 |
0.86 |
0.79 |
0.92 |
0.94 |
chr7 | 25041860 | 25047891 | chr7:25041860-25047891:-:L1HS:REF | L1HS | REF | full-length | — | 0.27 |
0.96 |
0.97 |
0.92 |
0.04 |
0.93 |
0.92 |
0.96 |
0.86 |
0.49 |
0.98 |
0.98 |
chr7 | 25603033 | 25609049 | chr7:25603033-25609049:+:L1PA2:REF | L1PA2 | REF | full-length | LOC646588 | 0.15 |
0.03 |
0.04 |
0.79 |
0.1 |
0.4 |
0.02 |
0.49 |
0.07 |
0.01 |
0.24 |
0.93 |
chr7 | 25743832 | 25749863 | chr7:25743832-25749863:+:L1PA2:REF | L1PA2 | REF | full-length | LOC646588 | 0.15 |
— | 0.9 |
0.76 |
0.08 |
0.89 |
0.88 |
0.86 |
0.91 |
— | — | 0.95 |
chr7 | 27002445 | 27008595 | chr7:27002445-27008595:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.95 |
0.88 |
0.87 |
0.89 |
0.63 |
0.65 |
0.72 |
0.88 |
— | 0.66 |
0.98 |
chr7 | 27502208 | 27508199 | chr7:27502208-27508199:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.49 |
0.88 |
0.95 |
0.92 |
0.8 |
0.97 |
0.92 |
0.9 |
0.89 |
0.92 |
0.94 |
0.98 |
chr7 | 29579936 | 29585963 | chr7:29579936-29585963:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.25 |
0.97 |
0.84 |
0.86 |
0.49 |
0.82 |
0.86 |
0.8 |
0.92 |
0.8 |
0.81 |
0.91 |
chr7 | 30414475 | 30420503 | chr7:30414475-30420503:-:L1PA2:REF | L1PA2 | REF | full-length | NOD1 | 0.7 |
0.2 |
0.98 |
0.97 |
0.4 |
0.96 |
0.96 |
0.95 |
0.86 |
0.98 |
0.96 |
0.98 |
chr7 | 30439242 | 30445274 | chr7:30439242-30445274:+:L1HS:REF | L1HS | REF | full-length | NOD1 | 0.9 |
0.96 |
0.99 |
0.96 |
0.15 |
0.95 |
0.95 |
0.92 |
0.82 |
0.97 |
0.94 |
0.95 |
chr7 | 30537513 | 30543634 | chr7:30537513-30543634:+:L1PA5:REF | L1PA5 | REF | full-length | GARS-DT | 0.44 |
0.91 |
0.88 |
0.87 |
0.82 |
0.86 |
0.79 |
0.88 |
0.91 |
0.71 |
0.92 |
0.9 |
chr7 | 30636808 | 30642830 | chr7:30636808-30642830:-:L1PA2:REF | L1PA2 | REF | full-length | GARS | 0.97 |
0.96 |
0.97 |
0.98 |
0.08 |
0.92 |
0.99 |
0.87 |
0.43 |
0.97 |
0.63 |
0.98 |
chr7 | 31501202 | 31507228 | chr7:31501202-31507228:-:L1PA3:REF | L1PA3 | REF | full-length | ITPRID1 | 0.01 |
0.91 |
0.74 |
0.31 |
0.93 |
0.66 |
0.45 |
0.72 |
— | 0.39 |
0.66 |
0.65 |
chr7 | 32081883 | 32088040 | chr7:32081883-32088040:+:L1PA3:REF | L1PA3 | REF | full-length | PDE1C | 0.01 |
0.65 |
0.81 |
0.36 |
0.75 |
0.69 |
0.52 |
0.75 |
0.88 |
0.5 |
0.67 |
0.72 |
chr7 | 32307744 | 32313917 | chr7:32307744-32313917:+:L1PA4:REF | L1PA4 | REF | full-length | PDE1C | 0.01 |
0.91 |
0.79 |
0.65 |
0.87 |
0.78 |
0.68 |
0.86 |
0.86 |
0.45 |
0.78 |
0.86 |
chr7 | 32464528 | 32470565 | chr7:32464528-32470565:+:L1PA3:REF | L1PA3 | REF | full-length | LOC100130673 | 0.01 |
0.83 |
0.97 |
0.46 |
0.11 |
0.79 |
0.89 |
0.88 |
0.81 |
0.77 |
0.86 |
0.53 |
chr7 | 32682678 | 32688715 | chr7:32682678-32688715:-:L1PA2:REF | L1PA2 | REF | full-length | DPY19L1P1 | 0.98 |
0.99 |
0.98 |
0.96 |
0.62 |
0.97 |
0.98 |
0.96 |
0.96 |
0.97 |
0.98 |
0.98 |
chr7 | 32697653 | 32703545 | chr7:32697653-32703545:-:L1PA2:REF | L1PA2 | REF | full-length | DPY19L1P1 | 0.92 |
0.89 |
0.88 |
0.94 |
0.32 |
0.92 |
0.89 |
0.87 |
0.94 |
0.85 |
0.91 |
0.91 |
chr7 | 32708015 | 32714180 | chr7:32708015-32714180:+:L1PA3:REF | L1PA3 | REF | full-length | DPY19L1P1 | 0.92 |
0.99 |
0.96 |
0.98 |
0.79 |
0.94 |
0.98 |
0.99 |
0.87 |
0.94 |
0.98 |
0.99 |
chr7 | 33162386 | 33167012 | chr7:33162386-33167012:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | BBS9 | 0.03 |
0.86 |
0.93 |
0.82 |
0.98 |
0.85 |
1.0 |
0.81 |
— | 0.91 |
— | 0.92 |
chr7 | 33406378 | 33408588 | chr7:33406378-33408588:-:L1PA3:REF | L1PA3 | REF | 3prime-truncated | BBS9 | 0.0 |
0.84 |
0.92 |
0.8 |
0.92 |
0.92 |
0.76 |
0.91 |
0.98 |
0.9 |
0.93 |
0.97 |
chr7 | 33521747 | 33527773 | chr7:33521747-33527773:-:L1PA2:REF | L1PA2 | REF | full-length | BBS9 | 0.02 |
0.95 |
0.3 |
0.92 |
0.1 |
0.96 |
0.84 |
0.96 |
0.59 |
0.03 |
0.95 |
0.98 |
chr7 | 33988616 | 33994636 | chr7:33988616-33994636:-:L1PA2:REF | L1PA2 | REF | full-length | BMPER | 0.02 |
0.97 |
0.96 |
0.96 |
0.26 |
0.94 |
0.84 |
0.97 |
0.94 |
0.94 |
0.98 |
0.97 |
chr7 | 34169569 | 34175587 | chr7:34169569-34175587:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.04 |
0.02 |
0.9 |
0.01 |
0.29 |
0.95 |
0.95 |
0.97 |
0.82 |
0.01 |
0.95 |
0.49 |
chr7 | 34200242 | 34206277 | chr7:34200242-34206277:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.11 |
0.95 |
0.91 |
0.82 |
0.24 |
0.91 |
0.88 |
0.92 |
0.67 |
0.89 |
0.91 |
0.98 |
chr7 | 34431327 | 34437453 | chr7:34431327-34437453:+:L1PA6:REF | L1PA6 | REF | full-length | NPSR1-AS1 | 0.01 |
— | 0.7 |
0.56 |
0.93 |
0.88 |
0.99 |
0.71 |
— | 0.67 |
0.66 |
— |
chr7 | 34513494 | 34515633 | chr7:34513494-34515633:+:L1PA2:REF | L1PA2 | REF | 3prime-truncated | NPSR1-AS1 | 0.02 |
0.89 |
0.79 |
0.56 |
0.83 |
0.72 |
0.99 |
0.71 |
0.92 |
— | 0.67 |
0.97 |
chr7 | 34906239 | 34912252 | chr7:34906239-34912252:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.18 |
0.59 |
0.19 |
0.8 |
0.13 |
0.54 |
0.39 |
0.38 |
0.52 |
0.67 |
0.37 |
0.97 |
chr7 | 35092957 | 35098972 | chr7:35092957-35098972:+:L1PA2:REF | L1PA2 | REF | full-length | DPY19L2P1 | 0.06 |
0.97 |
0.96 |
0.8 |
0.23 |
0.83 |
0.85 |
0.85 |
0.86 |
0.94 |
0.81 |
0.98 |
chr7 | 36375312 | 36379233 | chr7:36375312-36379233:-:L1P2:REF | L1P2 | REF | 3prime-truncated | KIAA0895 | 0.06 |
0.54 |
0.72 |
0.72 |
0.8 |
0.6 |
0.55 |
0.32 |
0.74 |
0.62 |
0.21 |
0.92 |
chr7 | 36552965 | 36559126 | chr7:36552965-36559126:-:L1PA3:REF | L1PA3 | REF | full-length | AOAH | 0.02 |
0.2 |
0.95 |
0.41 |
0.89 |
0.76 |
0.54 |
0.75 |
0.94 |
0.86 |
0.88 |
0.88 |
chr7 | 37120163 | 37126300 | chr7:37120163-37126300:+:L1PA5:REF | L1PA5 | REF | full-length | ELMO1 | 0.1 |
0.63 |
0.9 |
0.48 |
0.91 |
0.87 |
0.82 |
0.83 |
0.96 |
0.84 |
0.95 |
0.95 |
chr7 | 37163342 | 37169491 | chr7:37163342-37169491:-:L1PA3:REF | L1PA3 | REF | full-length | ELMO1 | 0.34 |
0.61 |
0.9 |
0.45 |
0.91 |
0.84 |
0.89 |
0.81 |
0.92 |
0.84 |
0.89 |
0.95 |
chr7 | 37612053 | 37618072 | chr7:37612053-37618072:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.17 |
0.85 |
0.92 |
0.89 |
0.03 |
0.77 |
0.72 |
0.83 |
0.78 |
0.92 |
0.74 |
0.84 |
chr7 | 39007527 | 39013552 | chr7:39007527-39013552:-:L1PA2:REF | L1PA2 | REF | full-length | POU6F2 | 0.02 |
0.9 |
0.97 |
0.81 |
0.04 |
0.88 |
0.92 |
0.86 |
0.78 |
0.82 |
0.83 |
0.94 |
chr7 | 40333760 | 40339892 | chr7:40333760-40339892:-:L1PA5:REF | L1PA5 | REF | full-length | SUGCT | 0.22 |
0.64 |
0.81 |
0.53 |
0.91 |
0.85 |
0.95 |
0.77 |
0.94 |
0.76 |
0.85 |
0.92 |
chr7 | 42580573 | 42586752 | chr7:42580573-42586752:-:L1PA4:REF | L1PA4 | REF | full-length | — | — | 0.93 |
0.95 |
0.81 |
0.87 |
— | 0.17 |
0.77 |
— | 0.85 |
0.72 |
0.43 |
chr7 | 43414979 | 43417052 | chr7:43414979-43417052:-:L1PA2:REF | L1PA2 | REF | 3prime-truncated | HECW1 | 0.25 |
0.88 |
0.95 |
0.9 |
0.7 |
0.94 |
0.9 |
0.89 |
0.93 |
0.96 |
0.95 |
0.97 |
chr7 | 43773137 | 43779287 | chr7:43773137-43779287:-:L1PA4:REF | L1PA4 | REF | full-length | BLVRA | 0.2 |
0.67 |
0.96 |
— | 0.93 |
0.97 |
0.77 |
0.98 |
0.95 |
0.43 |
0.97 |
0.9 |
chr7 | 45947419 | 45953420 | chr7:45947419-45953420:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.97 |
0.9 |
0.95 |
0.9 |
0.95 |
0.88 |
0.94 |
0.97 |
0.75 |
0.93 |
0.97 |
chr7 | 46590735 | 46596528 | chr7:46590735-46596528:+:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.0 |
0.79 |
0.91 |
0.61 |
0.9 |
0.96 |
0.29 |
0.97 |
0.93 |
0.4 |
0.94 |
0.9 |