Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chrX | 71897087 | 71903211 | chrX:71897087-71903211:-:L1PA4:REF | L1PA4 | REF | full-length | NHSL2 | 0.11 |
0.45 |
0.83 |
0.31 |
0.7 |
0.85 |
0.36 |
0.77 |
0.98 |
0.65 |
0.81 |
0.94 |
chrX | 72440593 | 72446687 | chrX:72440593-72446687:+:L1PA3:REF | L1PA3 | REF | full-length | HDAC8 | — | 0.95 |
0.92 |
1.0 |
0.95 |
0.99 |
0.95 |
0.85 |
0.98 |
0.92 |
0.99 |
1.0 |
chrX | 72585447 | 72591573 | chrX:72585447-72591573:+:L1PA6:REF | L1PA6 | REF | full-length | PHKA1 | 0.5 |
0.72 |
0.24 |
1.0 |
0.9 |
0.6 |
0.96 |
0.43 |
— | 0.25 |
0.84 |
1.0 |
chrX | 72980711 | 72986876 | chrX:72980711-72986876:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.01 |
0.69 |
0.71 |
0.35 |
0.87 |
0.59 |
0.01 |
0.73 |
0.83 |
0.1 |
0.44 |
0.89 |
chrX | 73059663 | 73065814 | chrX:73059663-73065814:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.39 |
0.36 |
0.08 |
0.78 |
0.35 |
0.42 |
0.36 |
0.8 |
0.06 |
0.36 |
0.38 |
chrX | 73106142 | 73112170 | chrX:73106142-73112170:+:L1HS:REF | L1HS | REF | full-length | — | 0.04 |
0.83 |
0.66 |
0.65 |
0.11 |
0.73 |
0.87 |
0.76 |
0.88 |
0.58 |
0.85 |
0.87 |
chrX | 73184900 | 73190725 | chrX:73184900-73190725:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.02 |
0.76 |
0.49 |
0.3 |
0.86 |
0.62 |
0.3 |
0.72 |
0.92 |
0.26 |
0.64 |
0.72 |
chrX | 73229846 | 73231543 | chrX:73229846-73231543:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.02 |
0.36 |
0.02 |
0.03 |
0.55 |
0.07 |
0.01 |
0.06 |
0.56 |
0.01 |
0.07 |
0.03 |
chrX | 73380991 | 73387013 | chrX:73380991-73387013:+:L1HS:REF | L1HS | REF | full-length | — | 0.19 |
0.87 |
0.76 |
0.76 |
0.26 |
0.82 |
0.77 |
0.78 |
0.94 |
0.57 |
0.84 |
— |
chrX | 73498172 | 73498574 | chrX:73498172-73498574:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
0.48 |
0.01 |
0.0 |
0.73 |
0.18 |
0.0 |
0.08 |
0.8 |
0.02 |
0.04 |
0.05 |
chrX | 73643004 | 73645115 | chrX:73643004-73645115:-:L1P1:REF | L1P1 | REF | 3prime-truncated | CHIC1 | 0.29 |
0.93 |
0.88 |
0.97 |
0.94 |
0.98 |
0.57 |
0.96 |
0.95 |
0.87 |
0.98 |
0.95 |
chrX | 73767929 | 73768939 | chrX:73767929-73768939:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.01 |
0.51 |
0.54 |
0.14 |
0.89 |
0.2 |
0.37 |
0.38 |
0.92 |
0.21 |
0.41 |
0.43 |
chrX | 74033943 | 74040075 | chrX:74033943-74040075:-:L1PA5:REF | L1PA5 | REF | full-length | JPX | 0.04 |
0.94 |
0.71 |
0.74 |
0.91 |
0.93 |
0.93 |
0.85 |
0.96 |
0.47 |
0.92 |
0.97 |
chrX | 74099380 | 74101196 | chrX:74099380-74101196:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | FTX | 0.08 |
0.93 |
0.62 |
0.91 |
0.88 |
0.97 |
0.96 |
0.88 |
0.96 |
0.67 |
0.97 |
0.98 |
chrX | 74474478 | 74480631 | chrX:74474478-74480631:-:L1PA4:REF | L1PA4 | REF | full-length | SLC16A2 | 0.02 |
0.79 |
0.81 |
0.03 |
0.89 |
0.99 |
0.8 |
0.89 |
0.92 |
0.54 |
0.97 |
0.99 |
chrX | 74788952 | 74795000 | chrX:74788952-74795000:-:L1PA2:REF | L1PA2 | REF | full-length | NEXMIF | 0.18 |
0.83 |
0.58 |
0.49 |
0.74 |
0.7 |
0.51 |
0.71 |
0.92 |
0.49 |
0.7 |
0.88 |
chrX | 74872993 | 74879015 | chrX:74872993-74879015:-:L1PA3:REF | L1PA3 | REF | full-length | NEXMIF | 0.24 |
0.93 |
0.79 |
0.78 |
0.86 |
0.87 |
0.86 |
0.87 |
0.98 |
0.74 |
0.85 |
0.93 |
chrX | 75189044 | 75192098 | chrX:75189044-75192098:-:L1P1:REF | L1P1 | REF | 3prime-truncated | UPRT | 0.31 |
0.61 |
0.37 |
0.27 |
0.89 |
0.53 |
0.45 |
0.48 |
0.87 |
0.41 |
0.57 |
0.96 |
chrX | 75231937 | 75237961 | chrX:75231937-75237961:+:L1PA3:REF | L1PA3 | REF | full-length | UPRT | 0.13 |
0.46 |
— | 0.56 |
0.49 |
0.71 |
0.02 |
0.65 |
0.61 |
0.21 |
0.76 |
0.96 |
chrX | 75555159 | 75561178 | chrX:75555159-75561178:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.08 |
0.88 |
0.84 |
0.83 |
0.83 |
0.87 |
0.87 |
0.86 |
0.96 |
0.61 |
0.84 |
0.96 |
chrX | 75561270 | 75567303 | chrX:75561270-75567303:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.73 |
0.63 |
0.64 |
0.85 |
0.78 |
0.81 |
0.75 |
0.97 |
0.35 |
0.72 |
0.92 |
chrX | 75586528 | 75592512 | chrX:75586528-75592512:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.46 |
0.35 |
0.23 |
0.87 |
0.6 |
0.96 |
0.64 |
0.92 |
0.11 |
0.67 |
0.65 |
chrX | 75596508 | 75602623 | chrX:75596508-75602623:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.04 |
0.86 |
0.6 |
0.3 |
0.91 |
0.74 |
0.98 |
0.7 |
0.95 |
0.25 |
0.74 |
0.91 |
chrX | 76005216 | 76007849 | chrX:76005216-76007849:-:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.2 |
0.7 |
0.77 |
0.79 |
0.14 |
0.89 |
0.92 |
0.81 |
0.94 |
0.63 |
0.88 |
0.95 |
chrX | 76046791 | 76052939 | chrX:76046791-76052939:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.1 |
0.74 |
0.64 |
0.67 |
0.88 |
0.76 |
0.72 |
0.77 |
0.92 |
0.43 |
0.78 |
0.97 |
chrX | 76068803 | 76074837 | chrX:76068803-76074837:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.05 |
0.86 |
0.67 |
0.6 |
0.87 |
0.69 |
0.81 |
0.78 |
0.89 |
0.62 |
0.76 |
0.9 |
chrX | 76093507 | 76096303 | chrX:76093507-76096303:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | — | 0.61 |
0.05 |
— | 0.83 |
0.22 |
— | 0.23 |
— | 0.03 |
0.19 |
1.0 |
chrX | 76159024 | 76165478 | chrX:76159024-76165478:+:L1PA7:REF | L1PA7 | REF | full-length | PBDC1 | 0.0 |
0.6 |
0.31 |
0.0 |
0.76 |
0.3 |
0.0 |
0.23 |
0.86 |
0.24 |
0.24 |
0.84 |
chrX | 76233354 | 76239154 | chrX:76233354-76239154:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.01 |
0.71 |
0.51 |
0.27 |
0.87 |
0.82 |
0.41 |
0.59 |
0.94 |
— | 0.65 |
0.96 |
chrX | 76260041 | 76261636 | chrX:76260041-76261636:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.04 |
0.7 |
0.5 |
0.1 |
0.84 |
0.57 |
0.2 |
0.61 |
0.88 |
0.29 |
0.59 |
0.82 |
chrX | 76267405 | 76273429 | chrX:76267405-76273429:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.72 |
0.53 |
0.55 |
0.75 |
0.72 |
0.76 |
0.75 |
0.79 |
0.42 |
0.65 |
0.81 |
chrX | 76322775 | 76328806 | chrX:76322775-76328806:-:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.66 |
0.67 |
0.68 |
0.82 |
0.77 |
0.55 |
0.77 |
— | 0.42 |
0.76 |
0.89 |
chrX | 76559551 | 76565702 | chrX:76559551-76565702:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.77 |
0.06 |
0.0 |
0.69 |
0.2 |
0.02 |
0.24 |
0.5 |
0.01 |
0.16 |
0.56 |
chrX | 76660277 | 76666402 | chrX:76660277-76666402:-:L1PA3:REF | L1PA3 | REF | full-length | MIR325HG | 0.01 |
0.76 |
0.5 |
0.34 |
0.9 |
0.73 |
0.73 |
0.7 |
0.96 |
0.41 |
0.72 |
0.86 |
chrX | 76720028 | 76726045 | chrX:76720028-76726045:-:L1PA2:REF | L1PA2 | REF | full-length | MIR325HG | 0.04 |
0.72 |
0.55 |
0.63 |
0.87 |
0.7 |
0.58 |
0.68 |
0.94 |
0.52 |
0.68 |
0.81 |
chrX | 76755586 | 76758811 | chrX:76755586-76758811:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | MIR325HG | 0.01 |
0.35 |
0.33 |
0.04 |
0.65 |
0.4 |
0.55 |
0.55 |
0.85 |
0.15 |
0.41 |
0.4 |
chrX | 76777622 | 76781244 | chrX:76777622-76781244:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | MIR325HG | 0.0 |
— | 0.23 |
0.06 |
0.85 |
— | 0.36 |
0.21 |
— | 0.05 |
0.42 |
0.33 |
chrX | 76882208 | 76888356 | chrX:76882208-76888356:+:L1PA4:REF | L1PA4 | REF | full-length | MIR325HG | 0.02 |
0.5 |
0.15 |
0.08 |
0.8 |
0.55 |
0.64 |
0.49 |
0.78 |
0.02 |
0.52 |
0.4 |
chrX | 76924366 | 76930511 | chrX:76924366-76930511:+:L1PA3:REF | L1PA3 | REF | full-length | MIR325HG | 0.0 |
0.31 |
0.44 |
0.2 |
0.61 |
0.47 |
0.55 |
0.48 |
0.68 |
0.18 |
0.45 |
0.58 |
chrX | 76950413 | 76952145 | chrX:76950413-76952145:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | MIR325HG | 0.0 |
0.12 |
0.02 |
0.0 |
0.79 |
0.14 |
0.06 |
0.1 |
0.78 |
0.01 |
0.1 |
0.18 |
chrX | 76978611 | 76984765 | chrX:76978611-76984765:+:L1PA3:REF | L1PA3 | REF | full-length | MIR325HG | 0.01 |
0.47 |
0.4 |
0.09 |
0.94 |
0.51 |
0.81 |
0.57 |
1.0 |
0.17 |
0.62 |
0.7 |
chrX | 77089274 | 77095414 | chrX:77089274-77095414:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.03 |
0.73 |
0.42 |
0.52 |
0.91 |
0.72 |
0.86 |
0.66 |
0.89 |
0.19 |
0.62 |
0.78 |
chrX | 77253769 | 77254312 | chrX:77253769-77254312:+:L1PA8:REF | L1PA8 | REF | 3prime-truncated | — | 0.02 |
0.73 |
0.07 |
0.09 |
0.75 |
0.33 |
0.33 |
0.23 |
0.7 |
0.03 |
0.32 |
0.6 |
chrX | 77304725 | 77305044 | chrX:77304725-77305044:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.01 |
0.8 |
0.53 |
0.62 |
0.88 |
0.62 |
0.55 |
0.63 |
0.84 |
0.43 |
0.66 |
0.83 |
chrX | 77843842 | 77847573 | chrX:77843842-77847573:-:L1P1:REF | L1P1 | REF | 3prime-truncated | MAGT1 | 0.81 |
0.97 |
0.78 |
0.95 |
0.95 |
0.97 |
0.99 |
0.91 |
0.95 |
0.71 |
0.99 |
0.99 |
chrX | 78152445 | 78158029 | chrX:78152445-78158029:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.08 |
0.1 |
0.3 |
0.23 |
0.86 |
0.6 |
0.47 |
0.61 |
0.93 |
0.11 |
0.6 |
0.85 |
chrX | 78188849 | 78195000 | chrX:78188849-78195000:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.1 |
0.88 |
0.69 |
0.75 |
0.93 |
0.77 |
0.38 |
0.78 |
0.85 |
0.27 |
0.77 |
0.97 |
chrX | 78288970 | 78295119 | chrX:78288970-78295119:-:L1PA6:REF | L1PA6 | REF | full-length | CYSLTR1 | — | — | 0.0 |
0.0 |
0.91 |
— | — | 0.27 |
— | 0.01 |
0.41 |
1.0 |
chrX | 78466225 | 78472391 | chrX:78466225-78472391:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.05 |
0.07 |
0.42 |
0.29 |
0.81 |
0.59 |
0.21 |
0.67 |
0.93 |
0.08 |
0.67 |
0.94 |
chrX | 79205683 | 79211833 | chrX:79205683-79211833:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.82 |
0.49 |
0.33 |
0.83 |
0.69 |
0.21 |
0.67 |
0.94 |
0.23 |
0.75 |
0.88 |