Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr6 | 77730626 | 77736661 | chr6:77730626-77736661:-:L1PA3:REF | L1PA3 | REF | full-length | MEI4 | 0.01 |
— | — | — | 0.92 |
0.78 |
0.68 |
— | — | 0.6 |
0.78 |
0.82 |
chr6 | 77798491 | 77804602 | chr6:77798491-77804602:-:L1PA3:REF | L1PA3 | REF | full-length | MEI4 | 0.03 |
0.6 |
0.62 |
0.36 |
0.92 |
0.72 |
0.87 |
0.7 |
0.96 |
— | 0.65 |
0.97 |
chr6 | 77862081 | 77868224 | chr6:77862081-77868224:+:L1PA4:REF | L1PA4 | REF | full-length | MEI4 | 0.01 |
0.26 |
0.2 |
0.08 |
0.9 |
0.4 |
0.48 |
0.37 |
0.91 |
0.07 |
0.36 |
0.97 |
chr6 | 77991081 | 77997193 | chr6:77991081-77997193:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.72 |
0.73 |
0.36 |
0.94 |
0.8 |
0.52 |
0.83 |
0.97 |
0.43 |
0.77 |
0.98 |
chr6 | 78646742 | 78652881 | chr6:78646742-78652881:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.02 |
0.01 |
0.63 |
0.24 |
0.53 |
0.65 |
0.07 |
0.6 |
0.84 |
0.19 |
0.59 |
0.81 |
chr6 | 78694312 | 78700460 | chr6:78694312-78700460:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.88 |
0.33 |
0.09 |
0.84 |
0.51 |
0.3 |
0.64 |
0.84 |
0.03 |
0.56 |
0.85 |
chr6 | 78802650 | 78808101 | chr6:78802650-78808101:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
— | 0.41 |
0.26 |
0.84 |
0.43 |
0.02 |
0.61 |
0.93 |
0.09 |
0.7 |
0.98 |
chr6 | 78920945 | 78924807 | chr6:78920945-78924807:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | PHIP | 0.02 |
0.96 |
0.89 |
0.1 |
0.9 |
0.76 |
0.06 |
0.81 |
0.96 |
0.85 |
0.82 |
0.97 |
chr6 | 79284672 | 79290791 | chr6:79284672-79290791:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.96 |
0.9 |
0.75 |
0.93 |
0.73 |
0.53 |
0.74 |
0.93 |
0.83 |
0.67 |
0.96 |
chr6 | 79319638 | 79325774 | chr6:79319638-79325774:-:L1PA4:REF | L1PA4 | REF | full-length | LCAL1 | 0.01 |
0.91 |
0.74 |
0.59 |
0.84 |
0.52 |
0.33 |
0.6 |
0.94 |
0.52 |
0.53 |
0.77 |
chr6 | 79363357 | 79369020 | chr6:79363357-79369020:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.01 |
0.46 |
0.39 |
0.54 |
0.72 |
0.12 |
0.02 |
0.12 |
0.71 |
0.32 |
0.07 |
0.95 |
chr6 | 80051360 | 80054519 | chr6:80051360-80054519:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | TTK | 0.67 |
0.98 |
0.97 |
0.84 |
0.94 |
0.97 |
0.98 |
0.98 |
0.96 |
0.98 |
0.98 |
0.97 |
chr6 | 80492276 | 80498296 | chr6:80492276-80498296:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.95 |
0.86 |
0.88 |
0.59 |
0.91 |
0.87 |
0.82 |
0.96 |
0.81 |
0.93 |
0.97 |
chr6 | 80612144 | 80618209 | chr6:80612144-80618209:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.02 |
0.7 |
0.43 |
0.66 |
0.91 |
0.9 |
0.44 |
0.83 |
0.89 |
0.42 |
0.93 |
0.92 |
chr6 | 80847739 | 80853776 | chr6:80847739-80853776:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.95 |
0.71 |
0.88 |
0.92 |
0.86 |
0.63 |
0.8 |
0.96 |
0.54 |
0.89 |
0.98 |
chr6 | 81433358 | 81436998 | chr6:81433358-81436998:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.01 |
0.93 |
0.47 |
0.77 |
0.79 |
0.8 |
0.56 |
0.66 |
0.78 |
0.21 |
0.59 |
0.83 |
chr6 | 81869293 | 81875745 | chr6:81869293-81875745:+:L1PA7:REF | L1PA7 | REF | full-length | LINC02542 | 0.06 |
0.92 |
0.91 |
0.95 |
0.87 |
0.96 |
0.94 |
0.78 |
0.97 |
0.69 |
0.75 |
0.95 |
chr6 | 81953035 | 81959176 | chr6:81953035-81959176:-:L1PA5:REF | L1PA5 | REF | full-length | LINC02542 | 0.17 |
0.94 |
0.83 |
0.93 |
0.93 |
0.92 |
0.91 |
0.83 |
0.98 |
0.57 |
0.83 |
0.97 |
chr6 | 82101303 | 82107312 | chr6:82101303-82107312:+:L1PA2:REF | L1PA2 | REF | full-length | LINC02542 | 0.02 |
0.24 |
0.95 |
0.94 |
0.13 |
0.92 |
0.06 |
0.88 |
0.94 |
0.1 |
0.84 |
0.98 |
chr6 | 82150919 | 82152109 | chr6:82150919-82152109:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.46 |
0.97 |
0.86 |
0.9 |
0.62 |
0.81 |
0.78 |
0.87 |
0.89 |
0.67 |
0.63 |
1.0 |
chr6 | 82469506 | 82475649 | chr6:82469506-82475649:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.03 |
0.61 |
0.63 |
0.49 |
0.63 |
0.6 |
0.18 |
0.59 |
0.77 |
0.4 |
0.46 |
0.73 |
chr6 | 82558403 | 82564423 | chr6:82558403-82564423:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.98 |
0.97 |
0.8 |
0.25 |
0.92 |
0.68 |
0.85 |
0.9 |
0.65 |
0.83 |
0.96 |
chr6 | 83333952 | 83339981 | chr6:83333952-83339981:+:L1HS:REF | L1HS | REF | full-length | ME1 | 0.89 |
0.8 |
0.98 |
0.97 |
0.18 |
0.96 |
0.84 |
0.96 |
0.94 |
0.49 |
0.98 |
0.99 |
chr6 | 83495670 | 83500000 | chr6:83495670-83500000:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.1 |
0.94 |
0.93 |
0.76 |
0.91 |
0.8 |
0.62 |
0.9 |
0.94 |
0.91 |
0.8 |
0.97 |
chr6 | 84608436 | 84614463 | chr6:84608436-84614463:+:L1HS:REF | L1HS | REF | full-length | — | 0.08 |
— | — | — | — | — | — | — | — | — | — | — |
chr6 | 84626355 | 84632366 | chr6:84626355-84632366:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.2 |
0.88 |
— | 0.1 |
0.98 |
0.85 |
0.93 |
0.93 |
0.83 |
0.97 |
0.92 |
chr6 | 85307045 | 85313201 | chr6:85307045-85313201:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.55 |
0.57 |
0.44 |
0.58 |
0.54 |
0.4 |
0.55 |
— | 0.42 |
0.49 |
0.68 |
chr6 | 85377220 | 85380046 | chr6:85377220-85380046:+:L1P1:REF | L1P1 | REF | 3prime-truncated | LINC02535 | 0.01 |
0.83 |
0.84 |
0.81 |
0.88 |
0.88 |
0.64 |
0.87 |
0.89 |
0.59 |
0.89 |
0.87 |
chr6 | 85751661 | 85755015 | chr6:85751661-85755015:+:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.01 |
0.89 |
0.72 |
0.06 |
0.93 |
0.7 |
0.59 |
0.64 |
0.78 |
0.37 |
— | 0.95 |
chr6 | 85815945 | 85822083 | chr6:85815945-85822083:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.74 |
0.33 |
0.16 |
0.87 |
0.52 |
0.28 |
0.61 |
0.81 |
0.09 |
0.67 |
0.85 |
chr6 | 85857293 | 85863437 | chr6:85857293-85863437:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.79 |
0.77 |
0.45 |
0.84 |
0.7 |
0.38 |
0.82 |
0.79 |
0.21 |
0.82 |
0.61 |
chr6 | 85895195 | 85897108 | chr6:85895195-85897108:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.0 |
0.74 |
0.0 |
0.03 |
0.91 |
0.25 |
0.06 |
0.45 |
0.53 |
0.0 |
0.12 |
0.33 |
chr6 | 85930759 | 85936589 | chr6:85930759-85936589:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.0 |
0.75 |
0.18 |
0.3 |
0.79 |
0.51 |
0.19 |
0.58 |
0.64 |
0.07 |
0.57 |
0.58 |
chr6 | 85952904 | 85959050 | chr6:85952904-85959050:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.53 |
0.35 |
0.03 |
0.79 |
0.36 |
0.18 |
0.48 |
0.79 |
0.02 |
0.46 |
0.29 |
chr6 | 86000000 | 86005073 | chr6:86000000-86005073:-:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.06 |
0.73 |
0.91 |
0.83 |
0.14 |
0.88 |
0.69 |
— | — | 0.43 |
0.79 |
0.96 |
chr6 | 86021488 | 86027515 | chr6:86021488-86027515:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.8 |
0.73 |
0.46 |
0.27 |
0.7 |
0.69 |
0.67 |
0.87 |
0.44 |
0.72 |
0.87 |
chr6 | 86492121 | 86498254 | chr6:86492121-86498254:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.02 |
0.76 |
0.29 |
0.26 |
0.82 |
0.43 |
0.34 |
0.39 |
0.69 |
0.14 |
0.41 |
0.49 |
chr6 | 86569573 | 86575720 | chr6:86569573-86575720:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.9 |
0.51 |
0.21 |
0.89 |
0.55 |
0.43 |
0.66 |
0.88 |
0.21 |
0.63 |
0.65 |
chr6 | 86665208 | 86671238 | chr6:86665208-86671238:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.43 |
0.93 |
0.58 |
0.29 |
0.84 |
0.62 |
0.42 |
0.65 |
0.88 |
0.24 |
0.68 |
0.76 |
chr6 | 86806663 | 86812682 | chr6:86806663-86812682:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.89 |
0.68 |
0.6 |
0.35 |
0.75 |
0.78 |
0.77 |
0.76 |
0.47 |
0.74 |
0.8 |
chr6 | 86812682 | 86816094 | chr6:86812682-86816094:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
— | 0.06 |
0.09 |
0.61 |
0.42 |
0.08 |
0.37 |
0.83 |
0.07 |
0.23 |
0.21 |
chr6 | 86872827 | 86876086 | chr6:86872827-86876086:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.01 |
0.61 |
0.55 |
0.32 |
0.87 |
0.7 |
0.31 |
0.69 |
0.83 |
0.13 |
0.7 |
0.83 |
chr6 | 86897717 | 86903738 | chr6:86897717-86903738:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.0 |
0.59 |
0.69 |
0.58 |
— | 0.68 |
0.7 |
0.66 |
0.69 |
0.56 |
0.59 |
0.88 |
chr6 | 86921165 | 86927317 | chr6:86921165-86927317:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.89 |
0.68 |
0.23 |
0.75 |
0.53 |
0.4 |
0.54 |
0.82 |
0.36 |
0.48 |
0.37 |
chr6 | 87139685 | 87145758 | chr6:87139685-87145758:+:L1PA6:REF | L1PA6 | REF | full-length | ZNF292 | 0.05 |
0.33 |
0.68 |
0.1 |
0.86 |
0.7 |
0.29 |
0.81 |
0.89 |
0.42 |
0.68 |
0.3 |
chr6 | 87323278 | 87329278 | chr6:87323278-87329278:-:L1PA3:REF | L1PA3 | REF | full-length | GJB7 | 0.91 |
0.71 |
0.94 |
0.42 |
0.09 |
0.97 |
0.97 |
0.88 |
0.88 |
0.45 |
0.97 |
0.98 |
chr6 | 88350814 | 88352662 | chr6:88350814-88352662:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.43 |
0.49 |
0.77 |
— | 0.83 |
0.75 |
0.66 |
0.7 |
0.85 |
0.4 |
0.67 |
0.8 |
chr6 | 89225263 | 89231287 | chr6:89225263-89231287:-:L1PA2:REF | L1PA2 | REF | full-length | GABRR1 | 0.29 |
0.95 |
0.96 |
0.87 |
0.13 |
0.86 |
0.89 |
0.87 |
0.88 |
0.87 |
0.89 |
0.98 |
chr6 | 90053981 | 90060141 | chr6:90053981-90060141:+:L1PA4:REF | L1PA4 | REF | full-length | BACH2 | 0.39 |
0.67 |
0.96 |
0.61 |
0.85 |
0.9 |
0.81 |
0.89 |
0.97 |
0.94 |
0.86 |
0.92 |
chr6 | 90733744 | 90740207 | chr6:90733744-90740207:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.05 |
0.51 |
0.0 |
0.34 |
0.06 |
0.02 |
0.34 |
0.64 |
0.88 |
0.11 |
0.91 |