Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr6 | 91047151 | 91053161 | chr6:91047151-91053161:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.87 |
0.96 |
0.57 |
0.1 |
0.72 |
0.67 |
0.77 |
0.92 |
0.21 |
0.87 |
0.98 |
chr6 | 91589964 | 91591707 | chr6:91589964-91591707:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.02 |
0.82 |
0.82 |
0.98 |
0.87 |
0.76 |
0.92 |
0.91 |
0.82 |
0.92 |
0.81 |
0.98 |
chr6 | 93631588 | 93637609 | chr6:93631588-93637609:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.09 |
0.93 |
0.98 |
0.95 |
0.05 |
0.89 |
0.87 |
0.91 |
0.96 |
0.76 |
0.91 |
0.96 |
chr6 | 93865738 | 93871783 | chr6:93865738-93871783:-:L1HS:REF | L1HS | REF | full-length | — | 0.01 |
0.78 |
0.89 |
0.88 |
0.21 |
0.68 |
0.79 |
0.8 |
0.88 |
0.75 |
0.75 |
0.82 |
chr6 | 94197995 | 94204060 | chr6:94197995-94204060:-:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.73 |
0.88 |
0.8 |
0.08 |
0.84 |
0.79 |
0.9 |
0.96 |
0.85 |
0.88 |
0.99 |
chr6 | 94824163 | 94830307 | chr6:94824163-94830307:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.81 |
0.83 |
0.78 |
0.61 |
0.75 |
0.62 |
0.86 |
0.95 |
0.84 |
0.85 |
0.98 |
chr6 | 94851129 | 94857158 | chr6:94851129-94857158:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.45 |
0.7 |
0.72 |
0.85 |
0.73 |
0.76 |
0.77 |
0.96 |
0.81 |
0.82 |
0.98 |
chr6 | 94869039 | 94874443 | chr6:94869039-94874443:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.04 |
0.32 |
0.58 |
0.21 |
0.61 |
0.28 |
0.22 |
0.62 |
0.92 |
0.53 |
0.64 |
0.97 |
chr6 | 95453247 | 95454707 | chr6:95453247-95454707:-:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.0 |
0.66 |
0.0 |
0.08 |
0.81 |
0.11 |
0.02 |
0.12 |
— | 0.34 |
0.17 |
1.0 |
chr6 | 96478157 | 96479355 | chr6:96478157-96479355:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
0.97 |
0.4 |
0.07 |
0.87 |
0.45 |
0.02 |
0.68 |
0.97 |
0.13 |
0.53 |
0.97 |
chr6 | 96500000 | 96500444 | chr6:96500000-96500444:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.36 |
— | 0.92 |
0.57 |
— | 0.81 |
0.95 |
0.94 |
— | 0.76 |
0.9 |
— |
chr6 | 96982567 | 96987020 | chr6:96982567-96987020:-:L1P1:REF | L1P1 | REF | 3prime-truncated | KLHL32 | 0.11 |
0.53 |
0.84 |
0.52 |
0.82 |
0.7 |
0.48 |
0.52 |
0.93 |
0.55 |
0.73 |
0.97 |
chr6 | 97376538 | 97382707 | chr6:97376538-97382707:-:L1PA3:REF | L1PA3 | REF | full-length | LOC101927314 | 0.02 |
0.59 |
0.9 |
0.41 |
0.81 |
0.72 |
0.36 |
0.74 |
0.94 |
0.84 |
0.77 |
0.97 |
chr6 | 97794643 | 97800532 | chr6:97794643-97800532:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.0 |
0.16 |
0.74 |
0.23 |
0.86 |
0.37 |
0.02 |
0.5 |
0.93 |
0.41 |
0.42 |
0.97 |
chr6 | 98083035 | 98089205 | chr6:98083035-98089205:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.49 |
0.63 |
0.37 |
0.92 |
0.56 |
0.31 |
0.53 |
0.91 |
0.49 |
0.48 |
0.94 |
chr6 | 98416502 | 98422520 | chr6:98416502-98422520:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.68 |
0.91 |
0.58 |
0.24 |
0.39 |
0.79 |
0.72 |
0.95 |
0.53 |
0.74 |
0.98 |
chr6 | 98703059 | 98708329 | chr6:98703059-98708329:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.01 |
0.81 |
0.96 |
0.76 |
0.15 |
0.82 |
0.85 |
0.84 |
0.94 |
0.36 |
0.79 |
0.97 |
chr6 | 99204281 | 99210436 | chr6:99204281-99210436:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.08 |
0.77 |
0.76 |
0.37 |
0.83 |
0.66 |
0.64 |
0.71 |
0.92 |
0.52 |
0.69 |
0.94 |
chr6 | 99823597 | 99829594 | chr6:99823597-99829594:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.4 |
0.62 |
0.88 |
0.07 |
0.1 |
0.01 |
0.03 |
— | 0.05 |
0.66 |
0.92 |
chr6 | 99925836 | 99931990 | chr6:99925836-99931990:-:L1PA3:REF | L1PA3 | REF | full-length | MCHR2 | 0.01 |
0.81 |
0.88 |
0.77 |
0.81 |
0.97 |
0.78 |
0.9 |
0.96 |
0.83 |
0.94 |
0.97 |
chr6 | 99969576 | 99975717 | chr6:99969576-99975717:-:L1PA4:REF | L1PA4 | REF | full-length | MCHR2 | 0.01 |
0.8 |
0.65 |
0.44 |
0.89 |
0.77 |
— | 0.66 |
0.96 |
0.37 |
0.75 |
0.97 |
chr6 | 100196461 | 100202490 | chr6:100196461-100202490:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.88 |
0.92 |
0.97 |
0.94 |
0.08 |
0.99 |
0.93 |
0.97 |
0.95 |
0.57 |
0.98 |
0.48 |
chr6 | 100354703 | 100360725 | chr6:100354703-100360725:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.07 |
0.96 |
0.97 |
0.89 |
0.13 |
0.97 |
0.89 |
0.95 |
0.86 |
0.88 |
0.98 |
0.98 |
chr6 | 100580586 | 100586736 | chr6:100580586-100586736:-:L1PA3:REF | L1PA3 | REF | full-length | ASCC3 | 0.84 |
0.8 |
0.92 |
0.93 |
0.76 |
0.81 |
0.99 |
0.83 |
0.92 |
0.86 |
0.99 |
0.97 |
chr6 | 101028531 | 101031465 | chr6:101028531-101031465:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.01 |
0.93 |
0.79 |
0.96 |
0.86 |
0.77 |
0.29 |
0.78 |
0.89 |
0.83 |
0.8 |
0.91 |
chr6 | 101048507 | 101054605 | chr6:101048507-101054605:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.01 |
0.78 |
0.39 |
0.52 |
0.49 |
0.45 |
0.02 |
0.38 |
0.62 |
0.31 |
0.67 |
0.62 |
chr6 | 101152252 | 101158269 | chr6:101152252-101158269:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.83 |
0.71 |
0.81 |
0.87 |
0.88 |
0.59 |
0.75 |
0.97 |
0.7 |
0.8 |
0.95 |
chr6 | 101659470 | 101661929 | chr6:101659470-101661929:-:L1P3:REF | L1P3 | REF | 3prime-truncated | GRIK2 | 0.0 |
0.9 |
0.38 |
0.88 |
0.88 |
0.91 |
0.06 |
0.87 |
— | 0.54 |
0.8 |
0.95 |
chr6 | 101788209 | 101794361 | chr6:101788209-101794361:-:L1PA3:REF | L1PA3 | REF | full-length | GRIK2 | 0.01 |
0.9 |
0.82 |
0.98 |
0.86 |
0.93 |
0.63 |
0.92 |
0.97 |
0.73 |
0.93 |
0.92 |
chr6 | 102088197 | 102094226 | chr6:102088197-102094226:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.91 |
0.66 |
0.93 |
0.81 |
0.81 |
0.67 |
0.75 |
0.92 |
0.73 |
0.8 |
0.98 |
chr6 | 102752889 | 102758907 | chr6:102752889-102758907:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.98 |
0.82 |
0.91 |
0.15 |
0.82 |
0.78 |
0.79 |
0.97 |
0.93 |
0.93 |
0.89 |
chr6 | 103709031 | 103715056 | chr6:103709031-103715056:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.9 |
0.82 |
0.93 |
0.47 |
0.83 |
0.83 |
0.84 |
0.91 |
0.91 |
0.76 |
0.98 |
chr6 | 104374607 | 104380755 | chr6:104374607-104380755:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.09 |
0.36 |
0.44 |
0.78 |
0.8 |
0.57 |
0.22 |
0.5 |
0.79 |
0.53 |
0.5 |
0.93 |
chr6 | 104489393 | 104495424 | chr6:104489393-104495424:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.93 |
0.94 |
0.93 |
0.12 |
0.9 |
0.85 |
0.83 |
0.96 |
0.89 |
0.87 |
0.98 |
chr6 | 104737315 | 104743324 | chr6:104737315-104743324:+:L1PA2:REF | L1PA2 | REF | full-length | HACE1 | 0.94 |
0.98 |
0.97 |
0.88 |
0.11 |
0.98 |
0.98 |
0.98 |
0.95 |
0.96 |
0.98 |
0.93 |
chr6 | 104756574 | 104762708 | chr6:104756574-104762708:+:L1PA7:REF | L1PA7 | REF | full-length | HACE1 | 0.89 |
0.99 |
0.98 |
0.96 |
0.95 |
0.97 |
0.98 |
0.97 |
0.98 |
0.96 |
0.97 |
0.98 |
chr6 | 105716122 | 105722275 | chr6:105716122-105722275:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.12 |
0.36 |
0.82 |
0.82 |
0.41 |
0.86 |
0.48 |
— | 0.91 |
— | 0.81 |
0.74 |
chr6 | 106404578 | 106411023 | chr6:106404578-106411023:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.08 |
0.97 |
0.9 |
0.65 |
0.91 |
0.56 |
0.27 |
0.66 |
0.95 |
0.79 |
0.62 |
0.96 |
chr6 | 107166663 | 107170611 | chr6:107166663-107170611:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | PDSS2 | 0.84 |
0.97 |
0.97 |
0.97 |
0.9 |
0.96 |
0.98 |
0.99 |
0.96 |
0.97 |
0.98 |
0.99 |
chr6 | 107854715 | 107860748 | chr6:107854715-107860748:-:L1PA3:REF | L1PA3 | REF | full-length | SEC63 | 0.48 |
0.98 |
0.97 |
— | 0.21 |
0.91 |
0.01 |
0.88 |
0.94 |
0.95 |
0.86 |
0.8 |
chr6 | 108410815 | 108416935 | chr6:108410815-108416935:+:L1PA5:REF | L1PA5 | REF | full-length | AFG1L | 0.98 |
0.96 |
0.96 |
0.98 |
0.87 |
0.96 |
0.98 |
0.89 |
0.97 |
0.97 |
0.8 |
0.96 |
chr6 | 109245218 | 109251251 | chr6:109245218-109251251:-:L1PA2:REF | L1PA2 | REF | full-length | CCDC162P | 0.9 |
0.04 |
0.96 |
0.96 |
0.09 |
0.87 |
0.01 |
0.85 |
0.85 |
0.02 |
0.92 |
0.94 |
chr6 | 109534604 | 109540728 | chr6:109534604-109540728:-:L1PA5:REF | L1PA5 | REF | full-length | AK9 | 0.01 |
0.62 |
0.81 |
0.42 |
0.86 |
0.59 |
0.33 |
0.62 |
0.78 |
0.57 |
0.7 |
0.82 |
chr6 | 109678655 | 109682143 | chr6:109678655-109682143:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | AK9 | 0.14 |
— | 0.88 |
— | 0.24 |
— | 0.16 |
— | — | 0.75 |
0.79 |
— |
chr6 | 111505512 | 111507862 | chr6:111505512-111507862:-:L1P2:REF | L1P2 | REF | 3prime-truncated | TRAF3IP2-AS1 | 0.9 |
0.97 |
0.95 |
0.96 |
0.92 |
0.97 |
0.96 |
0.97 |
0.93 |
0.97 |
0.98 |
0.95 |
chr6 | 111903001 | 111909020 | chr6:111903001-111909020:-:L1PA2:REF | L1PA2 | REF | full-length | LINC02527 | 0.41 |
0.97 |
0.98 |
0.98 |
0.15 |
0.96 |
0.94 |
0.97 |
0.91 |
0.86 |
0.95 |
0.98 |
chr6 | 111929039 | 111935422 | chr6:111929039-111935422:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.88 |
0.71 |
0.48 |
0.81 |
0.64 |
0.18 |
0.84 |
0.91 |
0.73 |
0.79 |
0.94 |
chr6 | 112421100 | 112426517 | chr6:112421100-112426517:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
0.3 |
0.94 |
0.33 |
0.86 |
0.92 |
0.02 |
0.96 |
0.96 |
0.85 |
0.88 |
0.96 |
chr6 | 112703745 | 112709778 | chr6:112703745-112709778:+:L1HS:REF | L1HS | REF | full-length | — | 0.28 |
0.77 |
0.91 |
0.61 |
0.11 |
0.87 |
0.5 |
0.9 |
0.89 |
0.96 |
0.94 |
0.91 |
chr6 | 112813021 | 112819047 | chr6:112813021-112819047:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.05 |
0.25 |
0.94 |
0.65 |
0.13 |
0.95 |
0.81 |
0.96 |
0.85 |
0.91 |
0.98 |
0.98 |