Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr10 | 23851013 | 23857162 | chr10:23851013-23857162:-:L1PA3:REF | L1PA3 | REF | full-length | KIAA1217 | 0.0 |
0.75 |
0.66 |
0.29 |
0.74 |
0.64 |
0.37 |
0.56 |
0.8 |
0.57 |
0.5 |
0.47 |
chr10 | 24094324 | 24095382 | chr10:24094324-24095382:-:L1P1:REF | L1P1 | REF | 3prime-truncated | KIAA1217 | 0.03 |
0.94 |
0.96 |
0.43 |
0.86 |
0.72 |
0.88 |
0.7 |
0.96 |
0.88 |
0.64 |
0.75 |
chr10 | 25247314 | 25253340 | chr10:25247314-25253340:-:L1PA2:REF | L1PA2 | REF | full-length | GPR158 | 0.03 |
0.95 |
0.95 |
0.79 |
0.12 |
0.85 |
0.86 |
0.84 |
0.95 |
0.91 |
0.87 |
0.96 |
chr10 | 25418756 | 25418758 | chr10:25418756-25418758:-:L1HS:NONREF | L1HS | KNR | — | GPR158 | 0.01 |
0.94 |
0.8 |
0.79 |
0.12 |
0.66 |
0.26 |
0.73 |
0.68 |
0.53 |
0.7 |
0.9 |
chr10 | 25515369 | 25521391 | chr10:25515369-25521391:-:L1PA2:REF | L1PA2 | REF | full-length | GPR158 | 0.86 |
0.85 |
0.94 |
0.7 |
0.38 |
0.73 |
0.73 |
0.78 |
0.97 |
0.92 |
0.65 |
0.79 |
chr10 | 27299253 | 27305370 | chr10:27299253-27305370:+:L1PA4:REF | L1PA4 | REF | full-length | ARMC4P1 | 0.03 |
0.83 |
0.94 |
0.8 |
0.83 |
0.67 |
0.59 |
0.66 |
0.79 |
0.91 |
0.73 |
0.84 |
chr10 | 27418271 | 27424390 | chr10:27418271-27424390:+:L1PA4:REF | L1PA4 | REF | full-length | PTCHD3 | 0.02 |
0.96 |
0.93 |
0.68 |
0.87 |
0.77 |
0.8 |
0.79 |
0.95 |
0.86 |
0.66 |
0.96 |
chr10 | 29334661 | 29335640 | chr10:29334661-29335640:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.0 |
0.91 |
0.71 |
— | — | 0.64 |
— | 0.56 |
— | 0.74 |
0.72 |
0.69 |
chr10 | 30947409 | 30948037 | chr10:30947409-30948037:-:L1P1:REF | L1P1 | REF | 3prime-truncated | ZNF438 | 0.01 |
0.96 |
0.96 |
0.94 |
0.8 |
0.96 |
0.87 |
0.94 |
0.96 |
0.97 |
0.98 |
0.99 |
chr10 | 31443412 | 31449437 | chr10:31443412-31449437:-:L1PA2:REF | L1PA2 | REF | full-length | ZEB1 | 0.69 |
0.97 |
0.98 |
0.98 |
0.19 |
0.99 |
0.98 |
0.99 |
0.97 |
0.98 |
0.98 |
0.99 |
chr10 | 31469210 | 31475223 | chr10:31469210-31475223:+:L1PA3:REF | L1PA3 | REF | full-length | ZEB1 | 0.93 |
0.87 |
0.98 |
0.99 |
0.95 |
0.98 |
0.98 |
0.99 |
0.99 |
0.97 |
0.99 |
0.98 |
chr10 | 32501066 | 32502512 | chr10:32501066-32502512:-:L1P2:REF | L1P2 | REF | 3prime-truncated | CCDC7 | 0.11 |
0.96 |
0.48 |
0.96 |
0.92 |
0.92 |
0.36 |
0.77 |
0.87 |
0.74 |
0.82 |
0.97 |
chr10 | 32558677 | 32564814 | chr10:32558677-32564814:+:L1PA3:REF | L1PA3 | REF | full-length | CCDC7 | 0.56 |
0.27 |
0.94 |
0.89 |
0.69 |
0.96 |
0.9 |
0.92 |
0.98 |
0.91 |
0.97 |
0.98 |
chr10 | 32699054 | 32705157 | chr10:32699054-32705157:-:L1PA4:REF | L1PA4 | REF | full-length | CCDC7 | 0.01 |
0.84 |
0.73 |
0.7 |
0.85 |
0.84 |
0.66 |
0.81 |
0.87 |
0.68 |
0.85 |
0.84 |
chr10 | 32714106 | 32720586 | chr10:32714106-32720586:+:L1PA7:REF | L1PA7 | REF | full-length | CCDC7 | 0.01 |
0.92 |
0.64 |
0.7 |
0.89 |
0.78 |
0.26 |
0.79 |
0.79 |
0.44 |
0.69 |
0.94 |
chr10 | 32754652 | 32760755 | chr10:32754652-32760755:+:L1PA4:REF | L1PA4 | REF | full-length | CCDC7 | 0.01 |
— | 0.34 |
0.22 |
— | 0.72 |
0.03 |
0.56 |
0.88 |
0.06 |
0.58 |
— |
chr10 | 33510845 | 33516876 | chr10:33510845-33516876:-:L1HS:REF | L1HS | REF | full-length | — | 0.07 |
0.98 |
0.97 |
0.81 |
0.35 |
0.95 |
0.91 |
0.96 |
0.87 |
0.96 |
0.95 |
0.96 |
chr10 | 33690908 | 33696739 | chr10:33690908-33696739:-:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.0 |
1.0 |
0.92 |
0.18 |
0.91 |
0.77 |
0.77 |
0.94 |
1.0 |
0.83 |
0.8 |
0.93 |
chr10 | 35473782 | 35479771 | chr10:35473782-35479771:+:L1PA3:REF | L1PA3 | REF | full-length | CCNY | 0.97 |
0.98 |
0.98 |
0.98 |
0.93 |
0.97 |
0.98 |
0.94 |
0.98 |
0.96 |
0.99 |
0.98 |
chr10 | 35858668 | 35864695 | chr10:35858668-35864695:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.38 |
0.79 |
0.91 |
0.22 |
0.83 |
0.34 |
0.82 |
0.56 |
0.26 |
0.85 |
0.82 |
chr10 | 36912319 | 36914176 | chr10:36912319-36914176:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.01 |
0.68 |
0.29 |
0.0 |
0.91 |
0.46 |
0.08 |
0.46 |
0.74 |
0.24 |
0.45 |
0.21 |
chr10 | 37038753 | 37044909 | chr10:37038753-37044909:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.63 |
0.12 |
0.32 |
0.87 |
0.58 |
0.45 |
0.48 |
0.83 |
0.09 |
0.63 |
0.7 |
chr10 | 37044908 | 37050652 | chr10:37044908-37050652:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.0 |
0.9 |
0.31 |
0.14 |
0.82 |
0.5 |
0.06 |
0.5 |
0.75 |
0.17 |
0.54 |
0.45 |
chr10 | 37137240 | 37139196 | chr10:37137240-37139196:+:L1P1:REF | L1P1 | REF | 3prime-truncated | ANKRD30A | 0.03 |
0.71 |
0.53 |
0.32 |
0.85 |
0.58 |
0.31 |
0.63 |
0.79 |
0.35 |
0.66 |
0.64 |
chr10 | 37537981 | 37544103 | chr10:37537981-37544103:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.03 |
0.57 |
0.69 |
0.09 |
0.72 |
0.53 |
0.1 |
0.64 |
0.54 |
0.21 |
0.5 |
0.39 |
chr10 | 37765638 | 37771787 | chr10:37765638-37771787:+:L1PA4:REF | L1PA4 | REF | full-length | ZNF248 | 0.0 |
0.99 |
0.56 |
0.05 |
0.82 |
0.48 |
0.96 |
0.56 |
0.73 |
0.31 |
0.44 |
0.93 |
chr10 | 37896970 | 37902988 | chr10:37896970-37902988:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.05 |
0.87 |
0.75 |
0.74 |
0.92 |
0.8 |
0.78 |
0.83 |
0.93 |
0.53 |
0.81 |
0.89 |
chr10 | 37995443 | 38000000 | chr10:37995443-38000000:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.56 |
0.95 |
0.92 |
0.7 |
0.8 |
0.85 |
0.84 |
0.85 |
0.93 |
0.93 |
0.9 |
0.96 |
chr10 | 42140003 | 42146144 | chr10:42140003-42146144:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.44 |
0.38 |
0.39 |
0.68 |
0.5 |
0.25 |
0.61 |
0.73 |
0.06 |
0.45 |
0.48 |
chr10 | 42526228 | 42532221 | chr10:42526228-42532221:-:L1PA3:REF | L1PA3 | REF | full-length | ZNF37BP | 0.96 |
0.95 |
0.99 |
— | 0.97 |
0.99 |
0.89 |
— | 0.96 |
0.93 |
0.97 |
0.98 |
chr10 | 42665128 | 42671301 | chr10:42665128-42671301:+:L1PA4:REF | L1PA4 | REF | full-length | LINC01518 | 0.68 |
0.48 |
0.51 |
0.08 |
0.84 |
0.54 |
0.01 |
0.62 |
0.86 |
0.33 |
0.65 |
0.87 |
chr10 | 43716710 | 43722842 | chr10:43716710-43722842:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.93 |
0.81 |
0.29 |
0.84 |
0.82 |
0.66 |
0.81 |
0.86 |
0.57 |
0.82 |
0.65 |
chr10 | 43989778 | 43993191 | chr10:43989778-43993191:-:L1P1:REF | L1P1 | REF | 3prime-truncated | LINC00841 | 0.02 |
0.87 |
0.85 |
0.37 |
0.86 |
0.85 |
0.75 |
0.86 |
0.9 |
0.75 |
0.81 |
0.67 |
chr10 | 44106731 | 44112897 | chr10:44106731-44112897:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.02 |
— | 0.84 |
0.23 |
0.58 |
0.89 |
0.57 |
— | 0.89 |
0.46 |
0.8 |
0.46 |
chr10 | 44137213 | 44138862 | chr10:44137213-44138862:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.01 |
0.83 |
0.75 |
0.03 |
0.84 |
0.75 |
0.39 |
0.71 |
0.88 |
0.46 |
0.47 |
0.12 |
chr10 | 44268315 | 44274469 | chr10:44268315-44274469:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.96 |
0.92 |
0.43 |
0.86 |
0.91 |
0.9 |
0.9 |
0.95 |
0.71 |
0.84 |
0.71 |
chr10 | 45009173 | 45015196 | chr10:45009173-45015196:-:L1PA3:REF | L1PA3 | REF | full-length | ZNF22 | 0.25 |
0.86 |
0.87 |
0.53 |
0.92 |
0.85 |
0.71 |
0.9 |
0.96 |
0.89 |
0.9 |
0.83 |
chr10 | 45250612 | 45251044 | chr10:45250612-45251044:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.49 |
— | 0.91 |
0.23 |
0.91 |
0.74 |
— | 0.8 |
— | 0.8 |
0.64 |
0.81 |
chr10 | 45362159 | 45368173 | chr10:45362159-45368173:+:L1PA6:REF | L1PA6 | REF | full-length | ALOX5 | 0.23 |
0.01 |
0.64 |
0.65 |
0.38 |
0.65 |
0.52 |
0.54 |
0.57 |
0.16 |
0.71 |
0.84 |
chr10 | 50262408 | 50264886 | chr10:50262408-50264886:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.36 |
0.75 |
0.75 |
0.16 |
0.8 |
0.68 |
0.01 |
0.76 |
0.8 |
0.47 |
0.73 |
0.81 |
chr10 | 50782474 | 50788587 | chr10:50782474-50788587:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.64 |
0.83 |
0.18 |
0.68 |
0.74 |
0.36 |
0.75 |
0.9 |
0.79 |
0.83 |
0.96 |
chr10 | 51163398 | 51165747 | chr10:51163398-51165747:+:L1P1:REF | L1P1 | REF | 3prime-truncated | PRKG1 | 0.03 |
0.93 |
0.97 |
0.72 |
0.9 |
0.96 |
0.9 |
0.94 |
0.87 |
0.96 |
0.97 |
0.95 |
chr10 | 51941454 | 51947615 | chr10:51941454-51947615:-:L1PA3:REF | L1PA3 | REF | full-length | PRKG1 | 0.01 |
0.69 |
0.93 |
0.48 |
0.92 |
0.96 |
0.74 |
0.91 |
0.91 |
0.94 |
0.98 |
0.9 |
chr10 | 52233328 | 52239334 | chr10:52233328-52239334:+:L1PA2:REF | L1PA2 | REF | full-length | PRKG1 | 0.01 |
0.0 |
— | 0.35 |
0.15 |
0.29 |
0.59 |
0.22 |
0.2 |
— | 0.06 |
0.01 |
chr10 | 52730355 | 52736527 | chr10:52730355-52736527:-:L1PA3:REF | L1PA3 | REF | full-length | LOC105378305 | 0.02 |
0.09 |
0.93 |
0.77 |
0.9 |
0.91 |
0.98 |
0.92 |
0.97 |
0.91 |
0.87 |
0.93 |
chr10 | 53494006 | 53500000 | chr10:53494006-53500000:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.04 |
0.8 |
0.88 |
0.69 |
0.91 |
0.68 |
0.53 |
0.73 |
0.96 |
0.91 |
0.68 |
0.96 |
chr10 | 55601875 | 55607910 | chr10:55601875-55607910:+:L1PA3:REF | L1PA3 | REF | full-length | PCDH15 | 0.01 |
0.02 |
0.01 |
0.75 |
0.07 |
0.03 |
0.11 |
0.03 |
0.03 |
0.01 |
0.07 |
0.98 |
chr10 | 55683076 | 55689092 | chr10:55683076-55689092:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.77 |
0.82 |
0.81 |
0.91 |
0.68 |
0.73 |
0.69 |
0.84 |
0.93 |
0.81 |
0.91 |
chr10 | 55899641 | 55905708 | chr10:55899641-55905708:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.77 |
0.84 |
0.72 |
0.09 |
0.64 |
0.69 |
0.78 |
0.21 |
0.06 |
0.78 |
0.96 |
chr10 | 56442079 | 56448236 | chr10:56442079-56448236:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.82 |
0.24 |
0.23 |
0.7 |
0.45 |
0.35 |
0.49 |
0.76 |
0.19 |
0.48 |
0.91 |