Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr10 | 90369650 | 90371954 | chr10:90369650-90371954:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.02 |
0.93 |
0.94 |
0.02 |
0.88 |
0.77 |
0.02 |
0.9 |
0.96 |
0.59 |
0.95 |
0.98 |
chr10 | 91188085 | 91188342 | chr10:91188085-91188342:+:L1P1:REF | L1P1 | REF | 3prime-truncated | PCGF5 | 0.9 |
0.98 |
0.97 |
0.98 |
0.91 |
0.97 |
0.98 |
0.96 |
0.98 |
0.96 |
0.98 |
0.98 |
chr10 | 91324304 | 91328005 | chr10:91324304-91328005:-:L1P1:REF | L1P1 | REF | 3prime-truncated | HECTD2-AS1 | 0.09 |
0.97 |
0.93 |
0.73 |
0.92 |
0.86 |
0.81 |
0.93 |
0.98 |
0.81 |
0.91 |
0.97 |
chr10 | 91503263 | 91509287 | chr10:91503263-91509287:+:L1PA2:REF | L1PA2 | REF | full-length | HECTD2-AS1 | 0.93 |
0.97 |
0.98 |
0.97 |
0.21 |
0.94 |
0.97 |
0.98 |
0.97 |
0.97 |
0.98 |
0.97 |
chr10 | 91643839 | 91650295 | chr10:91643839-91650295:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.13 |
0.1 |
0.43 |
0.63 |
0.57 |
0.9 |
0.05 |
0.89 |
0.78 |
0.47 |
0.98 |
0.72 |
chr10 | 91749615 | 91755638 | chr10:91749615-91755638:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.67 |
0.06 |
0.97 |
0.66 |
0.48 |
0.93 |
0.69 |
0.98 |
0.97 |
0.82 |
0.98 |
0.98 |
chr10 | 93520973 | 93527095 | chr10:93520973-93527095:+:L1PA4:REF | L1PA4 | REF | full-length | CEP55 | 0.97 |
0.98 |
0.98 |
0.98 |
0.96 |
0.99 |
0.98 |
0.99 |
0.99 |
0.97 |
0.98 |
0.99 |
chr10 | 93534981 | 93537186 | chr10:93534981-93537186:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | CEP55 | 0.11 |
0.93 |
0.95 |
0.77 |
0.91 |
0.86 |
0.72 |
0.89 |
0.97 |
0.91 |
0.91 |
0.97 |
chr10 | 94824660 | 94830681 | chr10:94824660-94830681:-:L1PA2:REF | L1PA2 | REF | full-length | CYP2C19 | 0.03 |
0.62 |
0.84 |
0.48 |
0.61 |
0.63 |
0.81 |
0.6 |
0.84 |
0.53 |
0.68 |
0.97 |
chr10 | 94895414 | 94899047 | chr10:94895414-94899047:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.02 |
0.45 |
0.25 |
0.08 |
0.76 |
0.53 |
0.77 |
0.46 |
0.81 |
0.06 |
— | 0.95 |
chr10 | 98541327 | 98544428 | chr10:98541327-98544428:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | HPSE2 | 0.01 |
0.64 |
0.75 |
0.04 |
0.55 |
0.75 |
0.15 |
0.74 |
0.84 |
0.49 |
0.67 |
0.31 |
chr10 | 98782941 | 98788971 | chr10:98782941-98788971:-:L1HS:REF | L1HS | REF | full-length | HPSE2 | 0.95 |
0.95 |
0.92 |
0.76 |
0.13 |
0.9 |
0.86 |
0.9 |
0.88 |
0.85 |
0.88 |
0.86 |
chr10 | 99099016 | 99105074 | chr10:99099016-99105074:+:L1PA5:REF | L1PA5 | REF | full-length | HPSE2 | 0.12 |
0.82 |
0.78 |
0.35 |
0.83 |
0.78 |
0.68 |
0.79 |
0.9 |
— | 0.74 |
0.76 |
chr10 | 99152737 | 99158758 | chr10:99152737-99158758:+:L1PA2:REF | L1PA2 | REF | full-length | HPSE2 | 0.52 |
0.97 |
0.93 |
0.67 |
0.12 |
0.88 |
0.85 |
0.89 |
0.93 |
0.87 |
0.88 |
0.89 |
chr10 | 100406330 | 100412500 | chr10:100406330-100412500:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.48 |
0.97 |
0.97 |
0.97 |
0.9 |
0.84 |
0.93 |
0.86 |
0.93 |
0.94 |
0.8 |
0.97 |
chr10 | 104533677 | 104534377 | chr10:104533677-104534377:-:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.04 |
0.85 |
0.95 |
0.55 |
0.82 |
0.8 |
0.75 |
0.81 |
0.94 |
0.57 |
0.75 |
0.86 |
chr10 | 104719978 | 104726123 | chr10:104719978-104726123:-:L1PA4:REF | L1PA4 | REF | full-length | SORCS3 | 0.0 |
0.5 |
0.87 |
0.51 |
0.82 |
0.74 |
0.43 |
0.73 |
0.97 |
0.49 |
0.73 |
0.81 |
chr10 | 105377346 | 105383377 | chr10:105377346-105383377:-:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.15 |
0.89 |
0.65 |
0.12 |
— | 0.88 |
0.84 |
0.92 |
0.6 |
0.79 |
0.89 |
chr10 | 105477215 | 105481175 | chr10:105477215-105481175:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.03 |
0.44 |
0.81 |
0.43 |
0.84 |
0.77 |
0.5 |
0.81 |
0.93 |
0.52 |
0.73 |
0.87 |
chr10 | 105550203 | 105556235 | chr10:105550203-105556235:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.05 |
0.47 |
0.17 |
0.67 |
0.48 |
0.09 |
0.53 |
0.9 |
0.13 |
0.41 |
0.49 |
chr10 | 105735717 | 105741873 | chr10:105735717-105741873:+:L1PA3:REF | L1PA3 | REF | full-length | LINC02627 | 0.01 |
0.22 |
0.64 |
0.5 |
0.86 |
0.61 |
0.22 |
0.73 |
0.95 |
0.22 |
0.6 |
0.57 |
chr10 | 105775520 | 105781551 | chr10:105775520-105781551:-:L1HS:REF | L1HS | REF | full-length | LINC02627 | 0.02 |
0.67 |
0.89 |
0.58 |
0.24 |
0.81 |
0.81 |
0.84 |
0.92 |
0.55 |
0.82 |
0.89 |
chr10 | 106257239 | 106257844 | chr10:106257239-106257844:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.01 |
0.23 |
0.78 |
0.5 |
0.75 |
0.63 |
0.02 |
0.57 |
0.82 |
0.23 |
0.54 |
0.34 |
chr10 | 106844583 | 106850610 | chr10:106844583-106850610:-:L1PA2:REF | L1PA2 | REF | full-length | SORCS1 | 0.29 |
0.86 |
0.85 |
0.65 |
0.18 |
0.81 |
0.68 |
0.78 |
0.92 |
0.82 |
0.77 |
0.82 |
chr10 | 107463536 | 107464312 | chr10:107463536-107464312:+:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.0 |
0.94 |
0.87 |
0.77 |
0.44 |
0.84 |
0.73 |
0.76 |
0.81 |
0.68 |
0.78 |
0.84 |
chr10 | 108018882 | 108021925 | chr10:108018882-108021925:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | LINC01435 | 0.0 |
0.38 |
0.73 |
0.18 |
0.83 |
0.45 |
0.05 |
0.5 |
0.88 |
0.02 |
0.56 |
0.26 |
chr10 | 108113943 | 108120006 | chr10:108113943-108120006:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.91 |
0.88 |
0.48 |
0.19 |
0.76 |
0.79 |
0.82 |
0.93 |
0.51 |
0.79 |
0.87 |
chr10 | 108310130 | 108316139 | chr10:108310130-108316139:-:L1HS:REF | L1HS | REF | full-length | — | 0.15 |
0.83 |
0.88 |
0.82 |
0.1 |
0.72 |
0.95 |
0.75 |
0.4 |
0.55 |
0.85 |
0.85 |
chr10 | 109131414 | 109137559 | chr10:109131414-109137559:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.0 |
0.01 |
0.15 |
0.02 |
0.57 |
0.29 |
0.02 |
0.35 |
— | 0.0 |
0.25 |
0.02 |
chr10 | 109223621 | 109229635 | chr10:109223621-109229635:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.0 |
0.04 |
0.71 |
0.54 |
0.77 |
0.74 |
0.44 |
0.88 |
0.94 |
0.29 |
0.87 |
0.58 |
chr10 | 109367269 | 109373405 | chr10:109367269-109373405:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.11 |
0.5 |
0.02 |
0.86 |
0.81 |
0.25 |
0.79 |
0.9 |
0.01 |
0.76 |
0.2 |
chr10 | 109546297 | 109552454 | chr10:109546297-109552454:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.02 |
0.33 |
0.19 |
0.1 |
0.27 |
0.17 |
0.08 |
0.15 |
0.15 |
0.13 |
0.17 |
0.11 |
chr10 | 109652357 | 109658473 | chr10:109652357-109658473:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.93 |
0.69 |
0.19 |
0.87 |
0.69 |
0.37 |
0.8 |
0.9 |
0.14 |
0.7 |
0.69 |
chr10 | 109681560 | 109687714 | chr10:109681560-109687714:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.64 |
0.61 |
0.09 |
0.87 |
0.54 |
0.37 |
0.57 |
0.91 |
0.2 |
0.58 |
0.62 |
chr10 | 109795499 | 109801544 | chr10:109795499-109801544:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.37 |
0.93 |
0.9 |
0.91 |
0.84 |
0.96 |
0.9 |
0.96 |
0.71 |
0.83 |
— |
chr10 | 109825817 | 109831846 | chr10:109825817-109831846:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.65 |
0.69 |
0.67 |
0.82 |
0.76 |
0.63 |
0.7 |
0.84 |
0.53 |
0.82 |
0.8 |
chr10 | 111043140 | 111049281 | chr10:111043140-111049281:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.09 |
0.94 |
0.9 |
0.86 |
0.84 |
0.87 |
0.75 |
0.88 |
0.93 |
0.55 |
0.84 |
0.97 |
chr10 | 111583927 | 111589948 | chr10:111583927-111589948:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.63 |
0.75 |
0.74 |
0.59 |
0.85 |
0.83 |
0.81 |
0.81 |
0.47 |
0.79 |
0.81 |
chr10 | 111813807 | 111819830 | chr10:111813807-111819830:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.27 |
0.71 |
0.45 |
0.87 |
0.78 |
0.77 |
0.72 |
0.96 |
0.35 |
0.72 |
0.73 |
chr10 | 112062391 | 112068402 | chr10:112062391-112068402:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.78 |
0.95 |
0.83 |
0.52 |
0.83 |
0.95 |
0.82 |
0.93 |
0.73 |
0.86 |
0.91 |
chr10 | 112103925 | 112109951 | chr10:112103925-112109951:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.5 |
0.79 |
0.61 |
0.8 |
0.71 |
0.63 |
0.66 |
0.82 |
0.39 |
0.66 |
0.79 |
chr10 | 115362336 | 115368543 | chr10:115362336-115368543:-:L1PA2:REF | L1PA2 | REF | full-length | ATRNL1 | 0.01 |
0.98 |
0.94 |
— | 0.13 |
0.91 |
0.92 |
0.9 |
0.95 |
0.86 |
0.85 |
0.96 |
chr10 | 115581746 | 115587785 | chr10:115581746-115587785:-:L1PA3:REF | L1PA3 | REF | full-length | ATRNL1 | 0.01 |
0.83 |
0.82 |
0.48 |
0.46 |
0.64 |
0.29 |
0.74 |
0.8 |
0.78 |
0.51 |
0.67 |
chr10 | 117079038 | 117085063 | chr10:117079038-117085063:-:L1PA2:REF | L1PA2 | REF | full-length | SHTN1 | 0.23 |
0.94 |
0.97 |
0.86 |
0.28 |
0.81 |
0.87 |
0.85 |
0.74 |
0.23 |
0.82 |
0.97 |
chr10 | 117832895 | 117838887 | chr10:117832895-117838887:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.43 |
0.98 |
0.97 |
0.85 |
0.33 |
0.7 |
0.4 |
0.47 |
0.47 |
0.85 |
0.48 |
0.97 |
chr10 | 120234299 | 120240325 | chr10:120234299-120240325:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.81 |
0.88 |
0.7 |
0.64 |
0.78 |
0.61 |
0.78 |
0.86 |
0.83 |
0.77 |
0.78 |
chr10 | 120910959 | 120916983 | chr10:120910959-120916983:+:L1PA3:REF | L1PA3 | REF | full-length | WDR11 | 0.88 |
0.9 |
0.9 |
0.9 |
0.89 |
0.91 |
0.9 |
0.91 |
0.91 |
0.88 |
0.91 |
0.91 |
chr10 | 125945237 | 125951250 | chr10:125945237-125951250:+:L1PA2:REF | L1PA2 | REF | full-length | FANK1 | 0.35 |
0.92 |
0.87 |
0.91 |
0.89 |
0.87 |
0.8 |
0.88 |
0.89 |
0.78 |
0.89 |
0.87 |
chr10 | 126676471 | 126682458 | chr10:126676471-126682458:+:L1PA3:REF | L1PA3 | REF | full-length | C10orf90 | 0.01 |
0.94 |
0.93 |
0.78 |
0.68 |
0.7 |
0.76 |
0.76 |
0.84 |
0.71 |
0.85 |
0.75 |
chr10 | 126761056 | 126767491 | chr10:126761056-126767491:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.96 |
0.65 |
0.07 |
0.91 |
0.06 |
0.07 |
0.25 |
0.84 |
0.05 |
0.28 |
0.1 |