Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chrX | 75231937 | 75237961 | chrX:75231937-75237961:+:L1PA3:REF | L1PA3 | REF | full-length | UPRT | 0.13 |
0.46 |
— | 0.56 |
0.49 |
0.71 |
0.02 |
0.65 |
0.61 |
0.21 |
0.76 |
0.96 |
chrX | 75555159 | 75561178 | chrX:75555159-75561178:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.08 |
0.88 |
0.84 |
0.83 |
0.83 |
0.87 |
0.87 |
0.86 |
0.96 |
0.61 |
0.84 |
0.96 |
chrX | 75561270 | 75567303 | chrX:75561270-75567303:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.73 |
0.63 |
0.64 |
0.85 |
0.78 |
0.81 |
0.75 |
0.97 |
0.35 |
0.72 |
0.92 |
chrX | 75586528 | 75592512 | chrX:75586528-75592512:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.46 |
0.35 |
0.23 |
0.87 |
0.6 |
0.96 |
0.64 |
0.92 |
0.11 |
0.67 |
0.65 |
chrX | 75596508 | 75602623 | chrX:75596508-75602623:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.04 |
0.86 |
0.6 |
0.3 |
0.91 |
0.74 |
0.98 |
0.7 |
0.95 |
0.25 |
0.74 |
0.91 |
chrX | 76005216 | 76007849 | chrX:76005216-76007849:-:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.2 |
0.7 |
0.77 |
0.79 |
0.14 |
0.89 |
0.92 |
0.81 |
0.94 |
0.63 |
0.88 |
0.95 |
chrX | 76046791 | 76052939 | chrX:76046791-76052939:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.1 |
0.74 |
0.64 |
0.67 |
0.88 |
0.76 |
0.72 |
0.77 |
0.92 |
0.43 |
0.78 |
0.97 |
chrX | 76068803 | 76074837 | chrX:76068803-76074837:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.05 |
0.86 |
0.67 |
0.6 |
0.87 |
0.69 |
0.81 |
0.78 |
0.89 |
0.62 |
0.76 |
0.9 |
chrX | 76159024 | 76165478 | chrX:76159024-76165478:+:L1PA7:REF | L1PA7 | REF | full-length | PBDC1 | 0.0 |
0.6 |
0.31 |
0.0 |
0.76 |
0.3 |
0.0 |
0.23 |
0.86 |
0.24 |
0.24 |
0.84 |
chrX | 76233354 | 76239154 | chrX:76233354-76239154:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.01 |
0.71 |
0.51 |
0.27 |
0.87 |
0.82 |
0.41 |
0.59 |
0.94 |
— | 0.65 |
0.96 |
chrX | 76260041 | 76261636 | chrX:76260041-76261636:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.04 |
0.7 |
0.5 |
0.1 |
0.84 |
0.57 |
0.2 |
0.61 |
0.88 |
0.29 |
0.59 |
0.82 |
chrX | 76267405 | 76273429 | chrX:76267405-76273429:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.72 |
0.53 |
0.55 |
0.75 |
0.72 |
0.76 |
0.75 |
0.79 |
0.42 |
0.65 |
0.81 |
chrX | 76322775 | 76328806 | chrX:76322775-76328806:-:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.66 |
0.67 |
0.68 |
0.82 |
0.77 |
0.55 |
0.77 |
— | 0.42 |
0.76 |
0.89 |
chrX | 76559551 | 76565702 | chrX:76559551-76565702:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.77 |
0.06 |
0.0 |
0.69 |
0.2 |
0.02 |
0.24 |
0.5 |
0.01 |
0.16 |
0.56 |
chrX | 76660277 | 76666402 | chrX:76660277-76666402:-:L1PA3:REF | L1PA3 | REF | full-length | MIR325HG | 0.01 |
0.76 |
0.5 |
0.34 |
0.9 |
0.73 |
0.73 |
0.7 |
0.96 |
0.41 |
0.72 |
0.86 |
chrX | 76720028 | 76726045 | chrX:76720028-76726045:-:L1PA2:REF | L1PA2 | REF | full-length | MIR325HG | 0.04 |
0.72 |
0.55 |
0.63 |
0.87 |
0.7 |
0.58 |
0.68 |
0.94 |
0.52 |
0.68 |
0.81 |
chrX | 76755586 | 76758811 | chrX:76755586-76758811:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | MIR325HG | 0.01 |
0.35 |
0.33 |
0.04 |
0.65 |
0.4 |
0.55 |
0.55 |
0.85 |
0.15 |
0.41 |
0.4 |
chrX | 76777622 | 76781244 | chrX:76777622-76781244:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | MIR325HG | 0.0 |
— | 0.23 |
0.06 |
0.85 |
— | 0.36 |
0.21 |
— | 0.05 |
0.42 |
0.33 |
chrX | 76882208 | 76888356 | chrX:76882208-76888356:+:L1PA4:REF | L1PA4 | REF | full-length | MIR325HG | 0.02 |
0.5 |
0.15 |
0.08 |
0.8 |
0.55 |
0.64 |
0.49 |
0.78 |
0.02 |
0.52 |
0.4 |
chrX | 76924366 | 76930511 | chrX:76924366-76930511:+:L1PA3:REF | L1PA3 | REF | full-length | MIR325HG | 0.0 |
0.31 |
0.44 |
0.2 |
0.61 |
0.47 |
0.55 |
0.48 |
0.68 |
0.18 |
0.45 |
0.58 |
chrX | 76950413 | 76952145 | chrX:76950413-76952145:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | MIR325HG | 0.0 |
0.12 |
0.02 |
0.0 |
0.79 |
0.14 |
0.06 |
0.1 |
0.78 |
0.01 |
0.1 |
0.18 |
chrX | 76978611 | 76984765 | chrX:76978611-76984765:+:L1PA3:REF | L1PA3 | REF | full-length | MIR325HG | 0.01 |
0.47 |
0.4 |
0.09 |
0.94 |
0.51 |
0.81 |
0.57 |
1.0 |
0.17 |
0.62 |
0.7 |
chrX | 77089274 | 77095414 | chrX:77089274-77095414:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.03 |
0.73 |
0.42 |
0.52 |
0.91 |
0.72 |
0.86 |
0.66 |
0.89 |
0.19 |
0.62 |
0.78 |
chrX | 77253769 | 77254312 | chrX:77253769-77254312:+:L1PA8:REF | L1PA8 | REF | 3prime-truncated | — | 0.02 |
0.73 |
0.07 |
0.09 |
0.75 |
0.33 |
0.33 |
0.23 |
0.7 |
0.03 |
0.32 |
0.6 |
chrX | 77304725 | 77305044 | chrX:77304725-77305044:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.01 |
0.8 |
0.53 |
0.62 |
0.88 |
0.62 |
0.55 |
0.63 |
0.84 |
0.43 |
0.66 |
0.83 |
chrX | 77843842 | 77847573 | chrX:77843842-77847573:-:L1P1:REF | L1P1 | REF | 3prime-truncated | MAGT1 | 0.81 |
0.97 |
0.78 |
0.95 |
0.95 |
0.97 |
0.99 |
0.91 |
0.95 |
0.71 |
0.99 |
0.99 |
chrX | 78152445 | 78158029 | chrX:78152445-78158029:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.08 |
0.1 |
0.3 |
0.23 |
0.86 |
0.6 |
0.47 |
0.61 |
0.93 |
0.11 |
0.6 |
0.85 |
chrX | 78188849 | 78195000 | chrX:78188849-78195000:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.1 |
0.88 |
0.69 |
0.75 |
0.93 |
0.77 |
0.38 |
0.78 |
0.85 |
0.27 |
0.77 |
0.97 |
chrX | 78466225 | 78472391 | chrX:78466225-78472391:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.05 |
0.07 |
0.42 |
0.29 |
0.81 |
0.59 |
0.21 |
0.67 |
0.93 |
0.08 |
0.67 |
0.94 |
chrX | 79205683 | 79211833 | chrX:79205683-79211833:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.82 |
0.49 |
0.33 |
0.83 |
0.69 |
0.21 |
0.67 |
0.94 |
0.23 |
0.75 |
0.88 |
chrX | 79926799 | 79932829 | chrX:79926799-79932829:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.0 |
0.06 |
0.5 |
0.56 |
0.12 |
0.74 |
0.48 |
0.61 |
0.88 |
0.34 |
0.69 |
0.98 |
chrX | 80151302 | 80157458 | chrX:80151302-80157458:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.0 |
0.41 |
0.24 |
0.74 |
0.6 |
— | 0.57 |
0.79 |
0.07 |
0.53 |
0.98 |
chrX | 80405241 | 80411257 | chrX:80405241-80411257:+:L1PA3:REF | L1PA3 | REF | full-length | TENT5D | 0.48 |
0.11 |
0.68 |
0.6 |
0.08 |
0.71 |
0.65 |
0.69 |
0.84 |
0.42 |
0.72 |
0.97 |
chrX | 80462184 | 80468712 | chrX:80462184-80468712:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.42 |
0.79 |
0.18 |
0.04 |
0.75 |
0.35 |
0.02 |
0.28 |
0.68 |
0.03 |
0.2 |
0.98 |
chrX | 80518026 | 80521631 | chrX:80518026-80521631:-:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.33 |
0.79 |
0.25 |
0.16 |
0.86 |
0.47 |
0.08 |
0.46 |
0.73 |
0.14 |
0.59 |
0.91 |
chrX | 80580911 | 80587335 | chrX:80580911-80587335:-:L1PA8:REF | L1PA8 | REF | full-length | — | 0.21 |
— | 0.08 |
0.06 |
0.64 |
— | 0.0 |
0.0 |
— | 0.03 |
0.33 |
1.0 |
chrX | 80766637 | 80771565 | chrX:80766637-80771565:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | BRWD3 | 0.61 |
0.83 |
0.63 |
0.98 |
0.87 |
0.99 |
0.99 |
0.76 |
0.99 |
0.52 |
0.99 |
0.98 |
chrX | 80887611 | 80893748 | chrX:80887611-80893748:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.49 |
0.06 |
0.06 |
0.76 |
0.2 |
0.01 |
0.25 |
0.78 |
0.02 |
0.44 |
0.97 |
chrX | 80905077 | 80905430 | chrX:80905077-80905430:-:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.03 |
0.82 |
0.64 |
0.51 |
0.91 |
0.8 |
0.36 |
0.73 |
0.86 |
0.27 |
0.82 |
0.99 |
chrX | 80976869 | 80982806 | chrX:80976869-80982806:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.15 |
0.62 |
0.65 |
0.41 |
0.7 |
0.78 |
0.78 |
0.61 |
0.91 |
0.57 |
0.84 |
0.98 |
chrX | 81026834 | 81032986 | chrX:81026834-81032986:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.02 |
0.19 |
0.52 |
0.43 |
0.28 |
0.65 |
0.62 |
0.72 |
0.86 |
0.25 |
0.74 |
0.97 |
chrX | 81143378 | 81149629 | chrX:81143378-81149629:+:L1PA7:REF | L1PA7 | REF | full-length | HMGN5 | 0.01 |
0.43 |
0.01 |
0.0 |
0.83 |
0.13 |
0.01 |
0.08 |
0.44 |
0.01 |
0.15 |
0.89 |
chrX | 81339892 | 81345906 | chrX:81339892-81345906:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.31 |
0.92 |
0.67 |
0.65 |
0.91 |
0.98 |
0.78 |
0.83 |
0.97 |
0.7 |
0.98 |
0.98 |
chrX | 81683940 | 81688835 | chrX:81683940-81688835:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.02 |
0.17 |
0.36 |
0.27 |
0.88 |
0.44 |
0.16 |
0.71 |
0.67 |
0.26 |
0.52 |
0.75 |
chrX | 81841153 | 81847184 | chrX:81841153-81847184:+:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.49 |
0.68 |
— | 0.83 |
0.74 |
0.72 |
— | 0.92 |
0.44 |
0.82 |
0.98 |
chrX | 81981453 | 81987740 | chrX:81981453-81987740:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.41 |
0.19 |
0.02 |
0.88 |
0.2 |
0.01 |
0.21 |
0.74 |
0.01 |
0.09 |
0.99 |
chrX | 82788276 | 82794455 | chrX:82788276-82794455:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.03 |
0.85 |
0.21 |
0.33 |
0.9 |
0.67 |
0.41 |
0.67 |
— | 0.03 |
0.61 |
0.96 |
chrX | 82802801 | 82808940 | chrX:82802801-82808940:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.69 |
0.2 |
— | 0.85 |
0.27 |
0.04 |
0.43 |
0.91 |
0.08 |
0.5 |
0.93 |
chrX | 82852260 | 82853243 | chrX:82852260-82853243:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.0 |
— | 0.01 |
0.03 |
0.72 |
0.0 |
0.03 |
0.03 |
— | 0.01 |
0.11 |
0.84 |
chrX | 83059584 | 83065637 | chrX:83059584-83065637:-:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.9 |
0.7 |
0.66 |
0.74 |
0.78 |
0.71 |
0.83 |
0.91 |
0.58 |
0.84 |
0.97 |