Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr15 | 17013608 | 17019737 | chr15:17013608-17019737:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
0.83 |
0.86 |
0.26 |
0.92 |
0.33 |
0.04 |
0.44 |
0.91 |
0.61 |
0.62 |
0.67 |
chr15 | 19948218 | 19954369 | chr15:19948218-19954369:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.02 |
0.28 |
0.29 |
0.09 |
0.68 |
0.58 |
0.5 |
0.57 |
0.85 |
0.11 |
0.57 |
0.43 |
chr15 | 20311030 | 20317051 | chr15:20311030-20317051:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.28 |
0.66 |
0.69 |
0.66 |
0.86 |
0.72 |
0.83 |
0.76 |
0.9 |
0.54 |
0.77 |
0.89 |
chr15 | 23714069 | 23720096 | chr15:23714069-23720096:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.07 |
0.62 |
0.5 |
0.08 |
0.73 |
0.02 |
0.66 |
0.74 |
0.15 |
0.7 |
0.67 |
chr15 | 26531055 | 26537615 | chr15:26531055-26537615:+:L1PA7:REF | L1PA7 | REF | full-length | GABRB3 | 0.01 |
0.43 |
0.64 |
0.11 |
0.75 |
0.46 |
0.04 |
0.48 |
0.79 |
0.01 |
0.48 |
0.25 |
chr15 | 27187726 | 27193872 | chr15:27187726-27193872:-:L1PA3:REF | L1PA3 | REF | full-length | GABRG3 | 0.63 |
0.28 |
0.61 |
0.29 |
0.81 |
0.68 |
0.13 |
0.77 |
0.93 |
0.26 |
0.64 |
0.63 |
chr15 | 30240360 | 30246398 | chr15:30240360-30246398:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.74 |
0.9 |
0.48 |
0.91 |
0.77 |
0.97 |
0.83 |
0.96 |
0.85 |
0.74 |
0.91 |
chr15 | 30775177 | 30781390 | chr15:30775177-30781390:+:L1PA4:REF | L1PA4 | REF | full-length | LOC100288637 | 0.98 |
0.97 |
0.98 |
0.98 |
0.88 |
0.99 |
0.97 |
0.99 |
0.99 |
0.98 |
0.82 |
0.98 |
chr15 | 30848621 | 30854753 | chr15:30848621-30854753:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.05 |
0.87 |
0.86 |
0.85 |
0.97 |
0.83 |
0.53 |
0.9 |
0.98 |
0.85 |
0.82 |
0.95 |
chr15 | 31617776 | 31623903 | chr15:31617776-31623903:-:L1PA5:REF | L1PA5 | REF | full-length | OTUD7A | 0.04 |
0.94 |
0.79 |
0.7 |
0.93 |
0.74 |
0.53 |
0.78 |
0.94 |
0.74 |
0.73 |
0.94 |
chr15 | 32045683 | 32051786 | chr15:32045683-32051786:-:L1PA3:REF | L1PA3 | REF | full-length | LOC100288637 | 0.02 |
0.92 |
0.97 |
0.61 |
0.89 |
0.76 |
0.76 |
0.8 |
0.94 |
0.96 |
0.75 |
0.96 |
chr15 | 32139925 | 32146049 | chr15:32139925-32146049:-:L1PA6:REF | L1PA6 | REF | full-length | LOC100288637 | 0.01 |
0.56 |
0.87 |
0.07 |
0.86 |
0.48 |
0.46 |
0.53 |
0.95 |
0.94 |
0.41 |
0.94 |
chr15 | 32292269 | 32298310 | chr15:32292269-32298310:+:L1PA3:REF | L1PA3 | REF | full-length | LOC100288637 | 0.02 |
0.0 |
0.97 |
0.55 |
0.76 |
0.71 |
0.97 |
0.77 |
— | 0.95 |
0.73 |
0.9 |
chr15 | 33739636 | 33739638 | chr15:33739636-33739638:-:L1HS:NONREF | L1HS | KNR | — | RYR3 | — | 0.85 |
— | — | — | — | — | — | 0.81 |
— | — | — |
chr15 | 33995744 | 33997047 | chr15:33995744-33997047:+:L1P2:REF | L1P2 | REF | 3prime-truncated | AVEN | 0.04 |
0.96 |
0.99 |
0.97 |
0.91 |
0.97 |
0.97 |
0.98 |
0.99 |
0.94 |
0.97 |
0.95 |
chr15 | 35385846 | 35391984 | chr15:35385846-35391984:-:L1PA4:REF | L1PA4 | REF | full-length | DPH6 | 0.64 |
0.85 |
0.97 |
0.96 |
0.91 |
0.91 |
0.97 |
0.97 |
0.96 |
0.92 |
0.98 |
0.98 |
chr15 | 36195372 | 36201389 | chr15:36195372-36201389:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.24 |
0.83 |
0.94 |
0.75 |
0.14 |
0.96 |
0.79 |
0.93 |
0.98 |
0.94 |
0.97 |
0.98 |
chr15 | 37319965 | 37325741 | chr15:37319965-37325741:+:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.01 |
0.16 |
0.48 |
0.11 |
0.81 |
0.45 |
0.15 |
0.48 |
0.86 |
0.37 |
0.43 |
0.87 |
chr15 | 37399471 | 37405476 | chr15:37399471-37405476:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.62 |
0.82 |
0.44 |
0.66 |
0.73 |
0.67 |
0.8 |
0.88 |
0.86 |
0.83 |
0.92 |
chr15 | 37427156 | 37433181 | chr15:37427156-37433181:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.6 |
0.86 |
0.66 |
0.16 |
0.77 |
0.73 |
0.88 |
0.87 |
0.89 |
0.83 |
0.93 |
chr15 | 38567626 | 38574032 | chr15:38567626-38574032:-:L1PA7:REF | L1PA7 | REF | full-length | RASGRP1 | 0.02 |
0.94 |
0.87 |
0.15 |
0.84 |
0.65 |
0.09 |
0.66 |
0.92 |
0.77 |
0.67 |
0.87 |
chr15 | 38782749 | 38788763 | chr15:38782749-38788763:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.94 |
0.91 |
0.78 |
0.88 |
0.94 |
0.72 |
0.94 |
0.94 |
0.68 |
0.96 |
0.94 |
chr15 | 39420570 | 39426588 | chr15:39420570-39426588:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.93 |
0.98 |
0.75 |
0.17 |
0.97 |
0.92 |
0.96 |
0.87 |
0.82 |
0.96 |
0.95 |
chr15 | 43175700 | 43178014 | chr15:43175700-43178014:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | TMEM62 | 0.98 |
0.98 |
0.98 |
0.99 |
0.92 |
0.99 |
0.97 |
0.99 |
0.99 |
0.91 |
0.91 |
0.98 |
chr15 | 43649975 | 43656002 | chr15:43649975-43656002:+:L1PA3:REF | L1PA3 | REF | full-length | PPIP5K1P1-CATSPER2 | 0.96 |
0.53 |
0.97 |
0.98 |
0.93 |
0.96 |
0.97 |
0.93 |
0.94 |
0.97 |
0.92 |
0.97 |
chr15 | 44252034 | 44258049 | chr15:44252034-44258049:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.6 |
0.91 |
0.12 |
0.83 |
0.1 |
0.56 |
0.52 |
0.66 |
0.35 |
0.03 |
0.85 |
0.91 |
chr15 | 44682790 | 44685327 | chr15:44682790-44685327:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | PATL2 | 0.09 |
0.15 |
0.46 |
0.31 |
0.75 |
0.44 |
0.05 |
0.71 |
0.67 |
0.36 |
0.76 |
0.8 |
chr15 | 44739238 | 44740551 | chr15:44739238-44740551:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | TRIM69 | 0.6 |
0.7 |
0.85 |
0.8 |
0.84 |
0.87 |
0.69 |
0.86 |
0.86 |
0.79 |
0.86 |
0.78 |
chr15 | 46104553 | 46110666 | chr15:46104553-46110666:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.62 |
0.62 |
0.39 |
0.84 |
0.79 |
0.45 |
0.77 |
0.95 |
0.2 |
0.77 |
0.67 |
chr15 | 46536240 | 46542382 | chr15:46536240-46542382:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.12 |
0.77 |
0.44 |
0.86 |
0.78 |
0.58 |
0.75 |
0.94 |
0.5 |
0.67 |
0.76 |
chr15 | 46614311 | 46615469 | chr15:46614311-46615469:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.01 |
0.67 |
0.78 |
0.62 |
0.84 |
0.64 |
0.73 |
0.76 |
0.95 |
0.62 |
0.72 |
0.85 |
chr15 | 47165532 | 47171560 | chr15:47165532-47171560:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.57 |
0.71 |
0.64 |
0.91 |
0.67 |
0.64 |
0.75 |
0.96 |
0.48 |
0.78 |
0.73 |
chr15 | 49354233 | 49360252 | chr15:49354233-49360252:+:L1PA2:REF | L1PA2 | REF | full-length | FAM227B | 0.88 |
0.98 |
0.9 |
0.94 |
0.7 |
0.98 |
0.87 |
0.9 |
0.93 |
0.89 |
0.93 |
0.94 |
chr15 | 49395983 | 49402014 | chr15:49395983-49402014:+:L1PA2:REF | L1PA2 | REF | full-length | FAM227B | 0.04 |
0.86 |
0.95 |
0.97 |
0.09 |
0.95 |
0.48 |
0.98 |
0.49 |
0.32 |
0.98 |
0.97 |
chr15 | 49591887 | 49593319 | chr15:49591887-49593319:-:L1P2:REF | L1P2 | REF | 3prime-truncated | FAM227B | 0.45 |
0.84 |
0.8 |
0.92 |
0.76 |
0.92 |
0.16 |
0.94 |
0.94 |
0.68 |
0.94 |
0.96 |
chr15 | 49778509 | 49784518 | chr15:49778509-49784518:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.47 |
0.92 |
0.86 |
0.97 |
0.89 |
0.95 |
0.78 |
0.98 |
0.97 |
0.88 |
0.97 |
0.98 |
chr15 | 51031621 | 51037649 | chr15:51031621-51037649:-:L1PA3:REF | L1PA3 | REF | full-length | MIR4713HG | 0.01 |
0.02 |
0.96 |
0.96 |
0.06 |
0.97 |
0.01 |
0.98 |
0.92 |
0.01 |
0.98 |
— |
chr15 | 51417216 | 51423246 | chr15:51417216-51423246:-:L1HS:REF | L1HS | REF | full-length | GLDN | 0.11 |
0.97 |
0.97 |
0.92 |
0.16 |
0.92 |
0.89 |
0.95 |
0.92 |
0.97 |
0.97 |
0.98 |
chr15 | 51590946 | 51597084 | chr15:51590946-51597084:+:L1PA4:REF | L1PA4 | REF | full-length | DMXL2 | — | 0.97 |
— | 0.94 |
— | 0.95 |
— | 0.96 |
— | — | 0.97 |
— |
chr15 | 53135442 | 53141475 | chr15:53135442-53141475:-:L1PA2:REF | L1PA2 | REF | full-length | LINC02490 | 0.02 |
0.77 |
0.76 |
0.49 |
0.57 |
0.65 |
0.77 |
0.66 |
0.83 |
0.46 |
0.69 |
0.79 |
chr15 | 53183248 | 53185103 | chr15:53183248-53185103:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.01 |
0.62 |
0.6 |
0.14 |
0.84 |
0.52 |
0.68 |
0.65 |
0.77 |
0.33 |
0.59 |
0.55 |
chr15 | 53684199 | 53690229 | chr15:53684199-53690229:+:L1PA3:REF | L1PA3 | REF | full-length | WDR72 | — | 0.46 |
— | 0.53 |
0.14 |
0.59 |
0.7 |
0.68 |
0.87 |
0.63 |
0.69 |
0.36 |
chr15 | 54444822 | 54450917 | chr15:54444822-54450917:-:L1PA5:REF | L1PA5 | REF | full-length | UNC13C | 0.01 |
0.27 |
0.58 |
0.29 |
0.87 |
0.68 |
0.33 |
0.74 |
0.89 |
0.15 |
0.68 |
0.7 |
chr15 | 54850725 | 54855879 | chr15:54850725-54855879:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
0.42 |
0.06 |
0.02 |
0.17 |
0.24 |
0.16 |
0.03 |
0.18 |
0.05 |
0.04 |
0.08 |
chr15 | 54871705 | 54877844 | chr15:54871705-54877844:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.36 |
0.67 |
0.15 |
0.79 |
0.59 |
0.3 |
0.58 |
0.87 |
0.17 |
0.56 |
0.62 |
chr15 | 55063993 | 55069991 | chr15:55063993-55069991:+:L1PA2:REF | L1PA2 | REF | full-length | LOC105370829 | 0.02 |
0.61 |
0.86 |
0.67 |
0.22 |
0.78 |
0.56 |
0.73 |
0.92 |
0.57 |
0.79 |
0.89 |
chr15 | 55944021 | 55947593 | chr15:55944021-55947593:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | NEDD4 | 0.77 |
0.93 |
0.92 |
0.97 |
0.93 |
0.98 |
0.96 |
0.97 |
0.99 |
0.95 |
0.98 |
0.98 |
chr15 | 55958953 | 55958956 | chr15:55958953-55958956:+:L1HS:NONREF | L1HS | KNR | — | NEDD4 | — | 0.05 |
0.97 |
— | 0.09 |
0.97 |
— | — | — | 0.01 |
0.98 |
— |
chr15 | 56134618 | 56140628 | chr15:56134618-56140628:-:L1PA2:REF | L1PA2 | REF | full-length | RFX7 | 0.97 |
0.97 |
0.98 |
0.99 |
0.89 |
0.99 |
0.98 |
0.98 |
0.98 |
0.97 |
0.98 |
0.98 |
chr15 | 56311143 | 56317177 | chr15:56311143-56317177:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.71 |
0.86 |
0.89 |
0.75 |
0.12 |
0.82 |
0.77 |
0.8 |
0.88 |
0.86 |
0.84 |
0.9 |