Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr15 | 56398989 | 56405142 | chr15:56398989-56405142:+:L1PA6:REF | L1PA6 | REF | full-length | TEX9 | 0.16 |
0.56 |
0.96 |
0.93 |
0.9 |
0.92 |
0.96 |
0.93 |
— | 0.98 |
0.82 |
0.96 |
chr15 | 57269391 | 57271723 | chr15:57269391-57271723:-:L1P2:REF | L1P2 | REF | 3prime-truncated | TCF12 | 0.97 |
0.84 |
0.95 |
0.96 |
0.9 |
0.91 |
0.95 |
0.94 |
0.98 |
0.94 |
0.98 |
0.95 |
chr15 | 57809154 | 57815556 | chr15:57809154-57815556:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.93 |
0.91 |
0.08 |
0.82 |
0.56 |
0.25 |
0.42 |
0.89 |
0.91 |
0.25 |
0.82 |
chr15 | 58125731 | 58131761 | chr15:58125731-58131761:+:L1PA2:REF | L1PA2 | REF | full-length | AQP9 | 0.81 |
0.87 |
0.9 |
0.61 |
0.33 |
0.84 |
0.83 |
0.85 |
0.95 |
0.86 |
0.79 |
0.87 |
chr15 | 58193368 | 58199552 | chr15:58193368-58199552:+:L1PA5:REF | L1PA5 | REF | full-length | AQP9 | 0.78 |
0.69 |
0.94 |
0.7 |
0.88 |
0.88 |
0.64 |
0.8 |
0.95 |
0.93 |
0.8 |
— |
chr15 | 59803402 | 59809494 | chr15:59803402-59809494:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.25 |
0.75 |
0.92 |
0.72 |
0.31 |
0.76 |
0.6 |
— | 0.64 |
0.74 |
— | 0.83 |
chr15 | 61896237 | 61902274 | chr15:61896237-61902274:+:L1PA3:REF | L1PA3 | REF | full-length | VPS13C | 0.96 |
0.98 |
0.98 |
0.98 |
0.9 |
0.98 |
0.98 |
0.99 |
0.99 |
0.97 |
0.98 |
0.99 |
chr15 | 64326660 | 64332685 | chr15:64326660-64332685:+:L1PA2:REF | L1PA2 | REF | full-length | CSNK1G1 | 0.91 |
0.67 |
0.94 |
0.48 |
0.09 |
0.96 |
0.95 |
0.95 |
0.66 |
0.1 |
0.97 |
0.97 |
chr15 | 66811397 | 66814133 | chr15:66811397-66814133:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.5 |
0.75 |
0.95 |
0.86 |
0.91 |
0.94 |
0.55 |
0.95 |
1.0 |
0.78 |
0.95 |
0.87 |
chr15 | 67448229 | 67454359 | chr15:67448229-67454359:-:L1PA4:REF | L1PA4 | REF | full-length | IQCH | 0.69 |
0.98 |
0.98 |
0.97 |
0.91 |
0.93 |
0.97 |
0.93 |
0.96 |
0.94 |
0.95 |
0.97 |
chr15 | 69617030 | 69623160 | chr15:69617030-69623160:-:L1PA4:REF | L1PA4 | REF | full-length | PCAT29 | 0.01 |
0.92 |
0.94 |
0.87 |
0.91 |
0.68 |
0.34 |
0.69 |
0.97 |
0.84 |
0.67 |
0.87 |
chr15 | 70984634 | 70990781 | chr15:70984634-70990781:-:L1PA3:REF | L1PA3 | REF | full-length | LRRC49 | 0.01 |
0.96 |
0.96 |
0.97 |
0.91 |
0.96 |
0.63 |
0.97 |
0.95 |
0.91 |
0.95 |
0.97 |
chr15 | 71174139 | 71180152 | chr15:71174139-71180152:+:L1PA2:REF | L1PA2 | REF | full-length | THSD4 | 0.17 |
0.97 |
0.97 |
0.98 |
0.12 |
0.98 |
0.85 |
0.98 |
0.93 |
0.91 |
0.99 |
— |
chr15 | 73215934 | 73222082 | chr15:73215934-73222082:-:L1PA3:REF | L1PA3 | REF | full-length | NEO1 | 0.56 |
0.21 |
0.93 |
0.92 |
0.94 |
0.89 |
0.97 |
0.91 |
0.95 |
0.94 |
0.94 |
0.97 |
chr15 | 73508419 | 73514470 | chr15:73508419-73514470:-:L1PA2:REF | L1PA2 | REF | full-length | REC114 | 0.75 |
0.97 |
0.98 |
0.85 |
0.08 |
0.91 |
0.94 |
0.94 |
0.92 |
0.96 |
0.95 |
0.97 |
chr15 | 77150514 | 77156644 | chr15:77150514-77156644:-:L1PA4:REF | L1PA4 | REF | full-length | PEAK1 | 0.97 |
0.01 |
0.99 |
0.6 |
0.92 |
0.98 |
0.95 |
0.98 |
0.97 |
0.96 |
0.98 |
0.98 |
chr15 | 78607584 | 78613730 | chr15:78607584-78613730:+:L1PA4:REF | L1PA4 | REF | full-length | CHRNA3 | — | 0.91 |
0.79 |
0.57 |
0.78 |
0.56 |
0.35 |
— | — | 0.82 |
0.55 |
0.86 |
chr15 | 78719832 | 78725853 | chr15:78719832-78725853:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.06 |
0.01 |
0.85 |
0.09 |
0.86 |
0.59 |
0.02 |
0.8 |
0.86 |
0.61 |
0.84 |
0.02 |
chr15 | 79485783 | 79491818 | chr15:79485783-79491818:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.32 |
0.86 |
0.92 |
0.73 |
0.17 |
0.8 |
0.83 |
0.87 |
0.95 |
0.81 |
0.88 |
0.94 |
chr15 | 79745087 | 79751113 | chr15:79745087-79751113:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | 0.98 |
0.84 |
— | 0.83 |
0.87 |
0.74 |
— | — | 0.8 |
0.85 |
0.93 |
chr15 | 81668513 | 81674504 | chr15:81668513-81674504:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.24 |
0.98 |
0.9 |
0.49 |
0.82 |
0.79 |
0.48 |
0.81 |
0.67 |
0.87 |
0.79 |
0.85 |
chr15 | 81697165 | 81703174 | chr15:81697165-81703174:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.05 |
0.01 |
0.97 |
0.53 |
0.28 |
0.84 |
0.63 |
0.83 |
0.93 |
0.71 |
0.79 |
0.75 |
chr15 | 81730280 | 81736308 | chr15:81730280-81736308:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.67 |
0.93 |
0.68 |
0.82 |
0.9 |
0.81 |
0.89 |
0.97 |
0.94 |
0.9 |
0.9 |
chr15 | 81797930 | 81803963 | chr15:81797930-81803963:+:L1PA2:REF | L1PA2 | REF | full-length | — | — | 0.14 |
— | — | 0.03 |
— | 0.68 |
— | — | 0.62 |
0.85 |
— |
chr15 | 81870667 | 81876699 | chr15:81870667-81876699:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.24 |
0.56 |
0.93 |
0.72 |
0.12 |
0.86 |
0.86 |
0.92 |
0.6 |
0.64 |
0.92 |
0.89 |
chr15 | 82882881 | 82888919 | chr15:82882881-82888919:-:L1HS:REF | L1HS | REF | full-length | HOMER2 | — | 0.97 |
0.99 |
0.76 |
0.24 |
0.89 |
0.94 |
0.92 |
0.9 |
0.97 |
0.91 |
0.96 |
chr15 | 83225410 | 83225680 | chr15:83225410-83225680:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.12 |
0.85 |
0.81 |
0.58 |
0.9 |
0.77 |
0.04 |
0.83 |
0.93 |
0.8 |
0.83 |
0.88 |
chr15 | 83383651 | 83389616 | chr15:83383651-83389616:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.06 |
0.28 |
0.94 |
0.9 |
0.14 |
0.92 |
0.82 |
0.92 |
0.87 |
0.02 |
0.87 |
0.95 |
chr15 | 83450804 | 83456834 | chr15:83450804-83456834:-:L1HS:REF | L1HS | REF | full-length | SH3GL3 | 0.29 |
0.83 |
0.98 |
0.79 |
0.17 |
0.86 |
0.85 |
0.88 |
0.93 |
0.91 |
0.83 |
0.96 |
chr15 | 84042408 | 84043645 | chr15:84042408-84043645:+:L1P1:REF | L1P1 | REF | 3prime-truncated | ADAMTSL3 | 0.08 |
0.77 |
0.94 |
0.23 |
0.11 |
0.63 |
0.73 |
0.76 |
0.91 |
0.88 |
0.56 |
0.89 |
chr15 | 85433963 | 85439965 | chr15:85433963-85439965:+:L1PA2:REF | L1PA2 | REF | full-length | AKAP13 | 0.06 |
0.8 |
0.99 |
0.99 |
0.11 |
0.87 |
0.45 |
0.9 |
0.33 |
0.32 |
0.84 |
0.99 |
chr15 | 86205831 | 86211977 | chr15:86205831-86211977:-:L1PA6:REF | L1PA6 | REF | full-length | AGBL1 | 0.01 |
0.81 |
0.89 |
0.49 |
0.93 |
0.75 |
0.75 |
0.8 |
0.97 |
0.29 |
0.73 |
0.53 |
chr15 | 86466145 | 86467937 | chr15:86466145-86467937:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | AGBL1 | 0.04 |
0.2 |
0.29 |
0.17 |
0.81 |
0.33 |
0.0 |
0.16 |
0.8 |
0.45 |
0.38 |
0.06 |
chr15 | 86528094 | 86534125 | chr15:86528094-86534125:+:L1PA2:REF | L1PA2 | REF | full-length | AGBL1 | 0.02 |
0.88 |
0.96 |
0.72 |
0.3 |
0.8 |
0.75 |
0.82 |
0.92 |
0.83 |
0.8 |
0.88 |
chr15 | 87001307 | 87006816 | chr15:87001307-87006816:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | AGBL1 | 0.0 |
0.84 |
0.79 |
0.05 |
0.79 |
0.54 |
0.1 |
— | 0.87 |
0.1 |
0.53 |
— |
chr15 | 87229793 | 87235895 | chr15:87229793-87235895:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.94 |
0.69 |
0.11 |
0.85 |
0.53 |
0.02 |
0.56 |
0.92 |
0.07 |
0.49 |
0.29 |
chr15 | 87249763 | 87255874 | chr15:87249763-87255874:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.18 |
0.91 |
0.65 |
0.16 |
0.87 |
0.61 |
0.15 |
0.52 |
0.93 |
0.04 |
0.64 |
0.39 |
chr15 | 87275324 | 87281469 | chr15:87275324-87281469:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.39 |
0.82 |
0.46 |
0.28 |
0.69 |
0.47 |
0.25 |
0.4 |
0.65 |
0.19 |
0.45 |
0.28 |
chr15 | 87463738 | 87469749 | chr15:87463738-87469749:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.24 |
0.85 |
0.93 |
0.48 |
0.24 |
0.65 |
0.63 |
0.63 |
0.87 |
0.42 |
0.5 |
0.56 |
chr15 | 87509891 | 87515920 | chr15:87509891-87515920:+:L1HS:REF | L1HS | REF | full-length | — | 0.6 |
0.98 |
0.9 |
0.62 |
0.2 |
0.84 |
0.67 |
0.86 |
0.91 |
0.53 |
0.83 |
0.83 |
chr15 | 89043903 | 89049907 | chr15:89043903-89049907:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.7 |
0.93 |
0.94 |
0.6 |
0.33 |
0.92 |
0.78 |
0.97 |
0.92 |
0.89 |
0.91 |
0.97 |
chr15 | 89634318 | 89640301 | chr15:89634318-89640301:+:L1PA3:REF | L1PA3 | REF | full-length | KIF7 | 0.88 |
0.94 |
0.91 |
0.94 |
0.86 |
0.91 |
0.93 |
0.95 |
0.89 |
0.9 |
0.91 |
0.93 |
chr15 | 91500665 | 91506649 | chr15:91500665-91506649:+:L1PA3:REF | L1PA3 | REF | full-length | CRAT37 | 0.38 |
0.95 |
0.91 |
0.7 |
0.28 |
0.76 |
0.89 |
0.9 |
0.88 |
0.53 |
0.82 |
0.8 |
chr15 | 93675399 | 93681428 | chr15:93675399-93681428:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.82 |
0.96 |
0.6 |
0.24 |
0.85 |
0.86 |
0.83 |
0.93 |
0.7 |
0.82 |
0.85 |
chr15 | 97265580 | 97271604 | chr15:97265580-97271604:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.77 |
— | 0.62 |
0.15 |
0.73 |
0.61 |
0.86 |
0.8 |
— | 0.73 |
0.86 |
chr15 | 97289925 | 97296313 | chr15:97289925-97296313:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.13 |
0.87 |
— | 0.06 |
0.65 |
0.54 |
0.76 |
0.58 |
0.01 |
0.74 |
0.92 |
chr15 | 97413295 | 97419473 | chr15:97413295-97419473:-:L1PA4:REF | L1PA4 | REF | full-length | LINC02254 | 0.04 |
0.48 |
0.97 |
0.55 |
0.92 |
0.82 |
0.69 |
0.81 |
0.86 |
0.11 |
0.81 |
0.92 |
chr15 | 97432693 | 97438849 | chr15:97432693-97438849:+:L1PA3:REF | L1PA3 | REF | full-length | LINC02254 | 0.01 |
0.68 |
0.93 |
0.47 |
0.9 |
0.63 |
0.43 |
0.72 |
0.95 |
0.91 |
0.67 |
0.78 |
chr15 | 100067771 | 100073922 | chr15:100067771-100073922:+:L1PA4:REF | L1PA4 | REF | full-length | ADAMTS17 | 0.01 |
0.91 |
0.91 |
0.27 |
0.83 |
0.4 |
0.56 |
0.5 |
0.91 |
0.78 |
0.43 |
0.97 |
chr15 | 100365266 | 100371301 | chr15:100365266-100371301:+:L1PA3:REF | L1PA3 | REF | full-length | CERS3-AS1 | 0.02 |
0.66 |
0.79 |
0.64 |
0.91 |
0.67 |
0.42 |
0.67 |
0.89 |
0.57 |
0.56 |
0.82 |