Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr16 | 60935971 | 60941164 | chr16:60935971-60941164:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | — | 0.55 |
0.48 |
0.12 |
0.83 |
0.64 |
0.44 |
0.63 |
0.91 |
0.28 |
— | 0.31 |
chr16 | 61801455 | 61807489 | chr16:61801455-61807489:+:L1PA2:REF | L1PA2 | REF | full-length | CDH8 | 0.02 |
0.62 |
0.91 |
0.92 |
0.11 |
0.82 |
0.71 |
— | 0.93 |
0.35 |
0.74 |
0.82 |
chr16 | 63119951 | 63125975 | chr16:63119951-63125975:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.13 |
0.81 |
0.94 |
0.8 |
0.87 |
0.86 |
0.85 |
0.89 |
0.98 |
0.73 |
0.87 |
0.94 |
chr16 | 65551127 | 65557278 | chr16:65551127-65557278:+:L1PA3:REF | L1PA3 | REF | full-length | LINC00922 | 0.05 |
0.96 |
0.88 |
0.45 |
0.88 |
0.94 |
0.44 |
0.96 |
0.94 |
0.31 |
0.94 |
0.52 |
chr16 | 65690011 | 65696020 | chr16:65690011-65696020:+:L1HS:REF | L1HS | REF | full-length | — | 0.15 |
0.97 |
0.95 |
0.64 |
0.49 |
0.94 |
0.78 |
0.94 |
0.97 |
— | 0.9 |
0.91 |
chr16 | 66495982 | 66500000 | chr16:66495982-66500000:+:L1P1:REF | L1P1 | REF | 3prime-truncated | BEAN1 | 0.06 |
0.99 |
0.92 |
0.92 |
0.91 |
0.9 |
0.71 |
0.88 |
0.97 |
0.76 |
0.88 |
0.97 |
chr16 | 68583448 | 68589505 | chr16:68583448-68589505:-:L1HS:REF | L1HS | REF | full-length | ZFP90 | 0.12 |
0.97 |
0.96 |
0.88 |
0.12 |
0.87 |
0.92 |
0.82 |
0.91 |
0.94 |
0.84 |
0.98 |
chr16 | 72324392 | 72329827 | chr16:72324392-72329827:+:L1P2:REF | L1P2 | REF | 3prime-truncated | LINC01572 | 0.02 |
0.68 |
0.87 |
0.65 |
0.82 |
0.84 |
0.94 |
0.72 |
0.89 |
0.77 |
0.73 |
0.95 |
chr16 | 72543204 | 72549689 | chr16:72543204-72549689:+:L1PA7:REF | L1PA7 | REF | full-length | LINC01572 | 0.69 |
0.96 |
0.92 |
0.69 |
0.93 |
0.98 |
0.96 |
0.96 |
0.96 |
0.97 |
0.95 |
0.99 |
chr16 | 72627274 | 72633298 | chr16:72627274-72633298:+:L1PA2:REF | L1PA2 | REF | full-length | LINC01572 | 0.01 |
0.37 |
0.35 |
0.9 |
0.03 |
0.87 |
0.01 |
0.85 |
0.48 |
0.01 |
— | 0.02 |
chr16 | 73824400 | 73830431 | chr16:73824400-73830431:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.04 |
0.75 |
0.93 |
0.67 |
0.19 |
0.77 |
0.81 |
0.9 |
0.95 |
0.71 |
0.8 |
0.83 |
chr16 | 75719124 | 75725286 | chr16:75719124-75725286:+:L1PA4:REF | L1PA4 | REF | full-length | CPHXL | 0.03 |
0.67 |
0.71 |
0.35 |
0.82 |
0.66 |
0.64 |
0.71 |
0.87 |
0.46 |
0.73 |
0.79 |
chr16 | 75821959 | 75827981 | chr16:75821959-75827981:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.91 |
0.88 |
0.77 |
— | 0.81 |
0.93 |
0.84 |
0.69 |
0.69 |
0.81 |
0.92 |
chr16 | 80136317 | 80142458 | chr16:80136317-80142458:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.38 |
0.5 |
0.06 |
0.77 |
0.77 |
0.16 |
0.65 |
0.9 |
0.08 |
0.59 |
0.06 |
chr16 | 80727089 | 80730717 | chr16:80727089-80730717:+:L1HS:REF | L1HS | REF | 3prime-truncated | CDYL2 | 0.01 |
0.01 |
0.97 |
0.02 |
0.93 |
0.91 |
0.71 |
0.86 |
0.93 |
0.77 |
0.95 |
0.63 |
chr16 | 81977353 | 81978467 | chr16:81977353-81978467:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.12 |
0.19 |
0.95 |
0.67 |
0.86 |
0.78 |
0.84 |
0.67 |
0.94 |
0.71 |
0.87 |
0.91 |
chr16 | 82139255 | 82145258 | chr16:82139255-82145258:+:L1PA2:REF | L1PA2 | REF | full-length | MPHOSPH6 | 0.87 |
0.01 |
0.97 |
0.98 |
0.4 |
0.97 |
0.97 |
0.89 |
0.83 |
0.91 |
0.94 |
0.88 |
chr16 | 83637252 | 83643296 | chr16:83637252-83643296:+:L1HS:REF | L1HS | REF | full-length | CDH13 | 0.06 |
0.24 |
0.96 |
0.78 |
0.1 |
0.88 |
0.83 |
0.95 |
0.88 |
0.6 |
0.97 |
0.83 |
chr16 | 86233295 | 86239310 | chr16:86233295-86239310:+:L1PA3:REF | L1PA3 | REF | full-length | LINC01081 | 0.02 |
0.92 |
0.96 |
0.89 |
0.76 |
0.89 |
0.73 |
0.9 |
0.93 |
0.91 |
0.98 |
0.76 |
chr16 | 86262173 | 86268197 | chr16:86262173-86268197:+:L1PA2:REF | L1PA2 | REF | full-length | LINC01081 | 0.17 |
0.95 |
0.91 |
0.95 |
0.93 |
0.86 |
0.81 |
0.99 |
0.95 |
0.9 |
0.99 |
0.96 |
chr17 | 634396 | 640538 | chr17:634396-640538:-:L1PA5:REF | L1PA5 | REF | full-length | VPS53 | 0.96 |
0.97 |
0.9 |
0.88 |
0.95 |
0.85 |
0.91 |
0.94 |
0.98 |
0.89 |
0.9 |
0.98 |
chr17 | 3147366 | 3153409 | chr17:3147366-3153409:-:L1PA2:REF | L1PA2 | REF | full-length | LOC100288728 | 0.01 |
0.93 |
0.92 |
0.61 |
0.2 |
0.65 |
0.7 |
0.7 |
0.81 |
0.63 |
0.67 |
0.85 |
chr17 | 3176530 | 3182557 | chr17:3176530-3182557:+:L1PA2:REF | L1PA2 | REF | full-length | LOC100288728 | 0.14 |
0.95 |
0.76 |
0.76 |
0.28 |
0.78 |
0.87 |
0.78 |
0.63 |
0.72 |
0.46 |
0.82 |
chr17 | 3326580 | 3332726 | chr17:3326580-3332726:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.49 |
0.77 |
0.52 |
0.89 |
0.65 |
0.69 |
0.67 |
0.77 |
0.42 |
0.64 |
0.76 |
chr17 | 3337282 | 3343391 | chr17:3337282-3343391:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.37 |
0.19 |
0.18 |
0.82 |
0.43 |
— | 0.41 |
0.77 |
0.19 |
0.48 |
0.27 |
chr17 | 5572832 | 5574657 | chr17:5572832-5574657:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | NLRP1 | 0.95 |
0.59 |
0.75 |
0.63 |
0.91 |
0.91 |
0.51 |
0.88 |
0.89 |
0.38 |
0.94 |
0.97 |
chr17 | 6802481 | 6808614 | chr17:6802481-6808614:-:L1PA4:REF | L1PA4 | REF | full-length | TEKT1 | 0.02 |
0.0 |
0.94 |
0.65 |
0.91 |
0.78 |
0.81 |
0.7 |
0.95 |
0.46 |
0.77 |
0.96 |
chr17 | 6847201 | 6849659 | chr17:6847201-6849659:-:L1P3:REF | L1P3 | REF | 3prime-truncated | ALOX12P2 | 0.28 |
0.95 |
0.96 |
0.97 |
0.89 |
0.62 |
0.88 |
0.55 |
0.97 |
0.56 |
0.59 |
0.91 |
chr17 | 9615985 | 9622015 | chr17:9615985-9622015:+:L1HS:REF | L1HS | REF | full-length | CFAP52 | 0.12 |
0.97 |
0.95 |
0.88 |
0.1 |
0.85 |
0.91 |
0.84 |
0.89 |
0.92 |
0.8 |
0.96 |
chr17 | 11861025 | 11867172 | chr17:11861025-11867172:-:L1PA3:REF | L1PA3 | REF | full-length | DNAH9 | — | 0.46 |
0.9 |
0.8 |
0.93 |
0.77 |
0.66 |
0.79 |
0.95 |
0.49 |
0.78 |
0.92 |
chr17 | 12449903 | 12455932 | chr17:12449903-12455932:-:L1PA2:REF | L1PA2 | REF | full-length | — | — | 0.85 |
0.92 |
0.66 |
0.3 |
0.91 |
0.76 |
0.96 |
0.9 |
0.78 |
0.97 |
0.84 |
chr17 | 13855495 | 13861599 | chr17:13855495-13861599:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.89 |
0.71 |
0.14 |
0.83 |
0.56 |
0.59 |
0.71 |
0.95 |
0.77 |
0.81 |
0.92 |
chr17 | 26735774 | 26741856 | chr17:26735774-26741856:+:L1PA4:REF | L1PA4 | REF | full-length | — | — | 0.23 |
0.21 |
— | 0.65 |
0.42 |
— | — | 0.74 |
0.13 |
0.49 |
0.26 |
chr17 | 27039669 | 27045623 | chr17:27039669-27045623:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.65 |
0.09 |
0.8 |
0.56 |
0.83 |
0.61 |
0.73 |
0.66 |
0.87 |
0.51 |
0.63 |
0.81 |
chr17 | 27099164 | 27105176 | chr17:27099164-27105176:-:L1PA2:REF | L1PA2 | REF | full-length | LOC105371703 | 0.02 |
0.75 |
0.93 |
0.84 |
0.1 |
0.69 |
0.79 |
0.75 |
0.86 |
0.03 |
0.76 |
0.93 |
chr17 | 27249212 | 27255352 | chr17:27249212-27255352:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.27 |
0.96 |
0.94 |
0.83 |
0.89 |
0.7 |
0.42 |
0.82 |
0.85 |
0.8 |
0.83 |
0.94 |
chr17 | 30406814 | 30413023 | chr17:30406814-30413023:-:L1PA6:REF | L1PA6 | REF | full-length | CPD | 0.71 |
0.77 |
0.85 |
0.82 |
0.89 |
0.89 |
0.99 |
0.94 |
0.97 |
0.92 |
0.82 |
0.9 |
chr17 | 31664913 | 31671035 | chr17:31664913-31671035:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.99 |
0.79 |
0.51 |
0.76 |
0.79 |
0.55 |
0.74 |
0.92 |
0.77 |
0.84 |
0.96 |
chr17 | 32678257 | 32684272 | chr17:32678257-32684272:-:L1PA2:REF | L1PA2 | REF | full-length | MYO1D | 0.98 |
0.98 |
0.96 |
0.63 |
0.1 |
0.9 |
0.69 |
0.86 |
0.86 |
0.72 |
0.83 |
0.98 |
chr17 | 32887137 | 32893184 | chr17:32887137-32893184:+:L1PA2:REF | L1PA2 | REF | full-length | MYO1D | 0.53 |
0.96 |
0.96 |
0.59 |
0.28 |
0.9 |
0.96 |
0.9 |
0.94 |
0.95 |
0.84 |
0.96 |
chr17 | 34083021 | 34089185 | chr17:34083021-34089185:-:L1PA3:REF | L1PA3 | REF | full-length | ASIC2 | 0.02 |
0.74 |
0.89 |
0.66 |
0.93 |
0.76 |
0.64 |
0.82 |
0.94 |
0.62 |
0.77 |
0.69 |
chr17 | 34292450 | 34298452 | chr17:34292450-34298452:-:L1PA2:REF | L1PA2 | REF | full-length | CCL11 | 0.09 |
0.95 |
0.97 |
— | 0.34 |
0.94 |
0.9 |
0.76 |
0.58 |
0.81 |
0.72 |
0.86 |
chr17 | 34808392 | 34808394 | chr17:34808392-34808394:-:L1HS:NONREF | L1HS | KNR | — | — | — | 0.91 |
— | — | — | — | — | 0.4 |
— | — | — | — |
chr17 | 35274370 | 35278179 | chr17:35274370-35278179:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | SLFN5 | 0.02 |
0.21 |
0.78 |
0.73 |
0.74 |
0.84 |
0.11 |
0.78 |
0.72 |
0.5 |
0.78 |
0.79 |
chr17 | 35393949 | 35399945 | chr17:35393949-35399945:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.02 |
0.94 |
0.16 |
0.93 |
0.88 |
0.45 |
0.87 |
0.87 |
0.6 |
0.95 |
0.91 |
chr17 | 41200867 | 41206900 | chr17:41200867-41206900:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.53 |
0.84 |
0.6 |
0.62 |
0.85 |
0.73 |
0.84 |
0.84 |
0.57 |
0.83 |
0.88 |
chr17 | 51331252 | 51333097 | chr17:51331252-51333097:-:L1P1:REF | L1P1 | REF | 3prime-truncated | LINC02071 | 0.28 |
0.97 |
0.96 |
0.87 |
0.92 |
0.86 |
0.5 |
0.87 |
0.95 |
0.92 |
0.84 |
0.92 |
chr17 | 51446677 | 51449322 | chr17:51446677-51449322:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | LINC02073 | 0.05 |
0.25 |
0.4 |
— | — | 0.19 |
0.02 |
0.25 |
— | 0.1 |
0.17 |
0.31 |
chr17 | 52403847 | 52409865 | chr17:52403847-52409865:-:L1PA2:REF | L1PA2 | REF | full-length | LINC01982 | 0.01 |
0.58 |
— | 0.52 |
0.77 |
0.71 |
0.72 |
0.71 |
0.95 |
0.49 |
0.72 |
0.93 |
chr17 | 54316374 | 54320132 | chr17:54316374-54320132:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.0 |
0.09 |
0.11 |
0.03 |
0.91 |
0.22 |
0.0 |
0.26 |
0.83 |
0.03 |
0.21 |
0.91 |