Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr5 | 147941118 | 147947133 | chr5:147941118-147947133:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.86 |
0.93 |
0.93 |
0.03 |
0.76 |
0.83 |
0.79 |
0.45 |
0.06 |
0.82 |
0.84 |
chr5 | 148230602 | 148236590 | chr5:148230602-148236590:+:L1PA3:REF | L1PA3 | REF | full-length | MARCOL | — | 0.75 |
0.81 |
0.9 |
0.02 |
0.67 |
0.6 |
0.87 |
— | 0.58 |
0.71 |
0.86 |
chr5 | 148279116 | 148281744 | chr5:148279116-148281744:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | LOC102546294 | — | — | — | — | — | — | — | — | — | — | 0.0 |
— |
chr5 | 148319975 | 148321427 | chr5:148319975-148321427:+:L1P1:REF | L1P1 | REF | 3prime-truncated | LOC102546294 | 0.06 |
0.33 |
0.1 |
0.91 |
0.11 |
0.3 |
0.03 |
0.68 |
0.34 |
0.03 |
0.43 |
0.96 |
chr5 | 148330860 | 148331235 | chr5:148330860-148331235:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | LOC102546294 | 0.04 |
0.3 |
0.65 |
0.85 |
0.82 |
0.59 |
0.3 |
0.69 |
0.92 |
0.29 |
0.7 |
0.91 |
chr5 | 148668218 | 148674344 | chr5:148668218-148674344:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.49 |
0.26 |
0.53 |
0.31 |
0.81 |
0.53 |
0.48 |
0.54 |
0.8 |
0.14 |
0.56 |
0.55 |
chr5 | 148942273 | 148948290 | chr5:148942273-148948290:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.13 |
0.98 |
0.96 |
0.96 |
0.93 |
0.97 |
0.88 |
— | — | 0.93 |
0.98 |
0.95 |
chr5 | 149122959 | 149124413 | chr5:149122959-149124413:+:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.02 |
0.27 |
0.93 |
0.88 |
0.91 |
0.92 |
0.59 |
0.95 |
0.96 |
0.8 |
0.94 |
0.94 |
chr5 | 150742837 | 150748950 | chr5:150742837-150748950:+:L1PA3:REF | L1PA3 | REF | full-length | DCTN4 | 0.98 |
0.97 |
0.98 |
0.98 |
0.93 |
0.96 |
0.98 |
0.98 |
0.98 |
0.98 |
0.98 |
0.98 |
chr5 | 150964139 | 150970275 | chr5:150964139-150970275:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.03 |
0.27 |
0.59 |
0.38 |
0.73 |
0.66 |
0.43 |
0.74 |
0.81 |
0.35 |
0.68 |
0.83 |
chr5 | 151389412 | 151395556 | chr5:151389412-151395556:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.79 |
0.94 |
0.28 |
0.91 |
0.63 |
0.21 |
0.67 |
0.92 |
0.56 |
0.75 |
0.98 |
chr5 | 151830848 | 151833467 | chr5:151830848-151833467:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | GLRA1 | — | — | — | — | — | — | — | — | — | — | 0.46 |
— |
chr5 | 152025898 | 152027470 | chr5:152025898-152027470:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | LINC01933 | 0.0 |
0.89 |
0.65 |
0.01 |
0.81 |
0.23 |
0.01 |
0.27 |
0.87 |
0.04 |
0.2 |
0.03 |
chr5 | 152076868 | 152082891 | chr5:152076868-152082891:+:L1HS:REF | L1HS | REF | full-length | LINC01933 | — | — | — | — | — | — | 0.05 |
— | — | — | 0.35 |
— |
chr5 | 152154288 | 152160759 | chr5:152154288-152160759:-:L1PA8:REF | L1PA8 | REF | full-length | LINC01933 | — | — | — | — | 0.43 |
0.26 |
0.0 |
0.35 |
0.91 |
0.02 |
0.33 |
0.02 |
chr5 | 152207300 | 152213333 | chr5:152207300-152213333:+:L1PA2:REF | L1PA2 | REF | full-length | LINC01933 | 0.01 |
0.8 |
0.87 |
0.68 |
0.11 |
0.65 |
0.77 |
0.66 |
0.83 |
0.5 |
0.63 |
0.74 |
chr5 | 152340020 | 152346052 | chr5:152340020-152346052:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.97 |
0.96 |
0.74 |
0.13 |
0.81 |
0.86 |
0.87 |
0.89 |
0.69 |
0.83 |
0.84 |
chr5 | 152653965 | 152659898 | chr5:152653965-152659898:-:L1PA2:REF | L1PA2 | REF | full-length | LINC01470 | 0.02 |
0.2 |
0.88 |
0.52 |
0.16 |
0.78 |
0.63 |
0.73 |
0.93 |
0.32 |
0.72 |
0.76 |
chr5 | 152740936 | 152746968 | chr5:152740936-152746968:+:L1PA2:REF | L1PA2 | REF | full-length | LINC01470 | 0.01 |
0.22 |
0.61 |
0.43 |
0.69 |
0.65 |
0.36 |
0.66 |
0.84 |
0.2 |
0.67 |
0.68 |
chr5 | 152762660 | 152768698 | chr5:152762660-152768698:-:L1PA3:REF | L1PA3 | REF | full-length | LINC01470 | 0.02 |
0.35 |
0.61 |
0.32 |
0.49 |
— | 0.49 |
0.78 |
— | 0.25 |
0.67 |
0.72 |
chr5 | 152787609 | 152793677 | chr5:152787609-152793677:+:L1PA6:REF | L1PA6 | REF | full-length | LINC01470 | — | — | — | — | — | — | — | — | — | — | 0.43 |
— |
chr5 | 152886441 | 152892473 | chr5:152886441-152892473:-:L1HS:REF | L1HS | REF | full-length | LINC01470 | 0.03 |
0.66 |
0.78 |
0.63 |
0.34 |
0.79 |
0.71 |
0.8 |
0.95 |
0.58 |
0.8 |
0.85 |
chr5 | 152913678 | 152919818 | chr5:152913678-152919818:-:L1PA4:REF | L1PA4 | REF | full-length | LINC01470 | 0.0 |
0.02 |
0.05 |
0.03 |
0.77 |
0.23 |
0.03 |
0.21 |
0.84 |
0.03 |
0.21 |
0.21 |
chr5 | 153070982 | 153077008 | chr5:153070982-153077008:-:L1HS:REF | L1HS | REF | full-length | — | 0.01 |
0.78 |
0.86 |
0.72 |
0.4 |
0.82 |
0.8 |
0.8 |
0.95 |
0.46 |
0.72 |
0.8 |
chr5 | 153300443 | 153306573 | chr5:153300443-153306573:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.04 |
0.15 |
0.49 |
0.3 |
0.87 |
0.43 |
0.24 |
0.35 |
0.67 |
0.07 |
0.33 |
0.37 |
chr5 | 153325326 | 153331330 | chr5:153325326-153331330:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.44 |
0.78 |
0.55 |
0.63 |
0.73 |
0.39 |
0.84 |
0.95 |
0.28 |
0.65 |
0.59 |
chr5 | 153381391 | 153387536 | chr5:153381391-153387536:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.12 |
0.75 |
0.24 |
0.93 |
0.77 |
0.57 |
0.69 |
0.97 |
0.27 |
0.68 |
0.62 |
chr5 | 153723252 | 153729397 | chr5:153723252-153729397:+:L1PA3:REF | L1PA3 | REF | full-length | GRIA1 | 0.01 |
0.52 |
0.74 |
0.21 |
0.86 |
0.82 |
0.59 |
0.77 |
0.83 |
0.19 |
0.75 |
0.51 |
chr5 | 153947742 | 153948166 | chr5:153947742-153948166:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.04 |
0.87 |
0.9 |
0.58 |
0.89 |
0.94 |
0.66 |
0.87 |
0.97 |
0.53 |
0.83 |
0.93 |
chr5 | 155168337 | 155174487 | chr5:155168337-155174487:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.96 |
0.81 |
0.5 |
0.92 |
0.78 |
0.8 |
0.82 |
0.91 |
0.5 |
0.77 |
0.85 |
chr5 | 155713949 | 155720091 | chr5:155713949-155720091:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.18 |
0.35 |
— | — | 0.61 |
0.38 |
0.42 |
0.38 |
— | — | 0.44 |
0.4 |
chr5 | 156061919 | 156067966 | chr5:156061919-156067966:-:L1HS:REF | L1HS | REF | full-length | — | 0.3 |
0.9 |
0.89 |
0.86 |
0.15 |
0.91 |
0.71 |
0.94 |
0.96 |
0.51 |
0.92 |
0.9 |
chr5 | 156605055 | 156611189 | chr5:156605055-156611189:-:L1PA4:REF | L1PA4 | REF | full-length | SGCD | 0.01 |
0.36 |
0.75 |
0.41 |
0.92 |
0.96 |
0.6 |
0.96 |
0.95 |
0.37 |
0.92 |
0.85 |
chr5 | 156984145 | 156988875 | chr5:156984145-156988875:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.02 |
0.66 |
0.83 |
0.37 |
0.88 |
0.68 |
0.7 |
0.71 |
0.94 |
0.27 |
0.7 |
0.77 |
chr5 | 158438806 | 158444948 | chr5:158438806-158444948:-:L1PA6:REF | L1PA6 | REF | full-length | — | — | — | — | — | 0.88 |
— | — | — | — | 0.89 |
0.92 |
— |
chr5 | 158444944 | 158447343 | chr5:158444944-158447343:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | — | — | — | — | — | — | — | — | — | — | 0.03 |
— |
chr5 | 160592426 | 160598550 | chr5:160592426-160598550:+:L1PA3:REF | L1PA3 | REF | full-length | ATP10B | 0.0 |
— | 0.58 |
— | 0.89 |
— | 0.46 |
— | — | 0.09 |
0.33 |
0.03 |
chr5 | 160709608 | 160715639 | chr5:160709608-160715639:-:L1HS:REF | L1HS | REF | full-length | ATP10B | 0.03 |
0.88 |
0.9 |
0.66 |
0.82 |
0.82 |
0.84 |
0.82 |
0.95 |
0.78 |
0.84 |
0.86 |
chr5 | 160873524 | 160879549 | chr5:160873524-160879549:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.78 |
0.79 |
0.41 |
0.19 |
0.47 |
0.79 |
0.43 |
0.48 |
0.13 |
0.5 |
0.74 |
chr5 | 161606050 | 161612084 | chr5:161606050-161612084:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.59 |
— | 0.5 |
0.68 |
0.65 |
0.48 |
0.66 |
0.93 |
— | 0.51 |
0.52 |
chr5 | 162030925 | 162036952 | chr5:162030925-162036952:-:L1PA2:REF | L1PA2 | REF | full-length | — | — | — | 0.82 |
0.8 |
0.06 |
— | 0.82 |
0.78 |
— | 0.54 |
0.77 |
0.77 |
chr5 | 162530742 | 162531677 | chr5:162530742-162531677:-:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.02 |
0.41 |
0.41 |
0.84 |
0.6 |
0.47 |
0.39 |
0.53 |
0.78 |
0.21 |
0.47 |
0.52 |
chr5 | 162578034 | 162584195 | chr5:162578034-162584195:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.72 |
0.65 |
0.97 |
0.91 |
0.7 |
0.66 |
0.74 |
0.96 |
0.48 |
0.75 |
0.83 |
chr5 | 162690774 | 162696913 | chr5:162690774-162696913:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.32 |
0.09 |
0.94 |
0.82 |
0.48 |
0.05 |
0.43 |
0.88 |
0.02 |
0.47 |
0.14 |
chr5 | 163165056 | 163171200 | chr5:163165056-163171200:+:L1PA6:REF | L1PA6 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.13 |
— |
chr5 | 165041696 | 165046553 | chr5:165041696-165046553:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | — | — | — | — | — | — | — | — | — | — | 0.24 |
— |
chr5 | 165068136 | 165068138 | chr5:165068136-165068138:-:L1HS:NONREF | L1HS | KNR | — | — | — | — | — | — | 0.82 |
0.75 |
— | — | 0.89 |
— | 0.83 |
— |
chr5 | 166141191 | 166145692 | chr5:166141191-166145692:-:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.01 |
0.75 |
0.7 |
0.41 |
0.42 |
0.72 |
0.5 |
0.72 |
0.92 |
0.32 |
0.71 |
0.76 |
chr5 | 166444535 | 166450988 | chr5:166444535-166450988:-:L1PA7:REF | L1PA7 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.02 |
— |
chr5 | 166966760 | 166972815 | chr5:166966760-166972815:-:L1HS:REF | L1HS | REF | full-length | — | 0.03 |
0.89 |
0.92 |
0.78 |
0.19 |
0.8 |
0.83 |
0.84 |
0.93 |
0.67 |
0.82 |
0.84 |