Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr5 | 90031166 | 90037663 | chr5:90031166-90037663:+:L1PA7:REF | L1PA7 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.01 |
— |
chr5 | 90073229 | 90079236 | chr5:90073229-90079236:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.62 |
0.91 |
0.65 |
0.06 |
0.75 |
0.69 |
0.65 |
0.96 |
0.7 |
0.69 |
0.97 |
chr5 | 90154963 | 90154967 | chr5:90154963-90154967:+:L1HS:NONREF | L1HS | KNR | — | LINC01339 | 0.02 |
0.92 |
— | 0.57 |
0.17 |
0.78 |
0.8 |
0.82 |
0.88 |
0.96 |
0.73 |
0.98 |
chr5 | 90208331 | 90214364 | chr5:90208331-90214364:+:L1PA2:REF | L1PA2 | REF | full-length | LINC01339 | 0.01 |
0.85 |
0.88 |
0.54 |
0.05 |
0.74 |
0.68 |
0.73 |
0.59 |
0.01 |
0.75 |
0.98 |
chr5 | 90662588 | 90668637 | chr5:90662588-90668637:-:L1PA3:REF | L1PA3 | REF | full-length | ADGRV1 | 0.89 |
0.84 |
0.94 |
0.66 |
0.09 |
0.74 |
0.58 |
0.73 |
0.71 |
0.41 |
0.79 |
0.92 |
chr5 | 90816413 | 90822442 | chr5:90816413-90822442:-:L1PA4:REF | L1PA4 | REF | full-length | ADGRV1 | 0.81 |
0.89 |
0.89 |
0.85 |
0.78 |
0.73 |
0.76 |
0.75 |
0.87 |
0.88 |
0.78 |
0.89 |
chr5 | 90923630 | 90929658 | chr5:90923630-90929658:-:L1PA2:REF | L1PA2 | REF | full-length | ADGRV1 | 0.95 |
0.44 |
0.98 |
0.98 |
0.09 |
0.95 |
0.98 |
0.96 |
0.65 |
0.61 |
0.97 |
0.98 |
chr5 | 91746646 | 91751658 | chr5:91746646-91751658:-:L1P3:REF | L1P3 | REF | 3prime-truncated | — | — | — | — | — | — | — | — | — | — | — | 0.3 |
— |
chr5 | 91762133 | 91768161 | chr5:91762133-91768161:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | 0.72 |
0.89 |
0.54 |
0.65 |
0.61 |
0.52 |
0.79 |
— | 0.68 |
0.8 |
0.9 |
chr5 | 92193473 | 92199495 | chr5:92193473-92199495:-:L1PA2:REF | L1PA2 | REF | full-length | — | — | 0.67 |
0.8 |
0.75 |
0.01 |
0.66 |
0.3 |
0.9 |
0.8 |
0.86 |
0.96 |
0.87 |
chr5 | 92296968 | 92302985 | chr5:92296968-92302985:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.95 |
0.94 |
0.95 |
0.15 |
0.96 |
0.9 |
0.97 |
0.98 |
0.97 |
0.96 |
0.98 |
chr5 | 93213145 | 93219176 | chr5:93213145-93219176:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.92 |
0.96 |
0.93 |
0.07 |
0.95 |
0.91 |
0.93 |
0.94 |
0.9 |
0.96 |
0.96 |
chr5 | 93261035 | 93267065 | chr5:93261035-93267065:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.95 |
0.97 |
0.9 |
0.07 |
0.89 |
0.95 |
0.96 |
0.96 |
0.96 |
0.89 |
0.91 |
chr5 | 93442075 | 93448205 | chr5:93442075-93448205:+:L1PA6:REF | L1PA6 | REF | full-length | NR2F1-AS1 | — | — | — | — | — | — | — | — | — | — | 0.82 |
— |
chr5 | 93522544 | 93529042 | chr5:93522544-93529042:+:L1PA8:REF | L1PA8 | REF | full-length | NR2F1-AS1 | 0.02 |
1.0 |
0.98 |
0.98 |
0.88 |
0.98 |
0.79 |
0.97 |
0.93 |
0.97 |
0.98 |
0.98 |
chr5 | 93856115 | 93857936 | chr5:93856115-93857936:-:L1PA3:REF | L1PA3 | REF | 3prime-truncated | FAM172A | 0.34 |
0.97 |
0.95 |
0.99 |
0.9 |
0.98 |
0.97 |
0.94 |
0.96 |
0.97 |
0.98 |
0.98 |
chr5 | 94132827 | 94138583 | chr5:94132827-94138583:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | — | — | — | — | — | — | — | — | — | — | 0.0 |
— |
chr5 | 96103200 | 96109249 | chr5:96103200-96109249:-:L1PA3:REF | L1PA3 | REF | full-length | LOC101929710 | 0.28 |
0.77 |
0.98 |
0.97 |
0.9 |
0.98 |
0.97 |
0.98 |
0.97 |
0.97 |
0.97 |
0.97 |
chr5 | 96303464 | 96309906 | chr5:96303464-96309906:-:L1PA7:REF | L1PA7 | REF | full-length | LOC101929710 | 0.01 |
0.96 |
0.93 |
0.96 |
0.93 |
0.98 |
0.99 |
0.96 |
0.96 |
0.89 |
0.97 |
0.97 |
chr5 | 96355999 | 96361794 | chr5:96355999-96361794:-:L1PA8:REF | L1PA8 | REF | 3prime-truncated | LOC101929710 | 0.0 |
0.78 |
0.78 |
0.95 |
0.87 |
0.81 |
0.45 |
0.85 |
0.93 |
0.29 |
0.84 |
0.66 |
chr5 | 96555240 | 96561368 | chr5:96555240-96561368:+:L1PA4:REF | L1PA4 | REF | full-length | LOC101929710 | 0.01 |
0.8 |
0.85 |
0.97 |
0.85 |
0.91 |
0.57 |
0.89 |
0.94 |
0.4 |
0.9 |
0.85 |
chr5 | 97234257 | 97240422 | chr5:97234257-97240422:-:L1PA6:REF | L1PA6 | REF | full-length | — | 0.04 |
0.39 |
0.74 |
0.34 |
0.93 |
0.91 |
0.61 |
0.85 |
0.96 |
0.44 |
0.94 |
0.99 |
chr5 | 97302295 | 97307097 | chr5:97302295-97307097:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.01 |
0.85 |
0.38 |
0.04 |
0.87 |
0.8 |
0.48 |
0.75 |
0.94 |
0.15 |
0.77 |
0.97 |
chr5 | 97513923 | 97519943 | chr5:97513923-97519943:-:L1PA2:REF | L1PA2 | REF | full-length | LINC01340 | 0.01 |
0.94 |
0.62 |
0.46 |
0.54 |
0.76 |
0.69 |
0.79 |
0.91 |
0.32 |
0.95 |
0.98 |
chr5 | 97717792 | 97723895 | chr5:97717792-97723895:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.81 |
0.57 |
0.3 |
0.89 |
0.95 |
0.22 |
0.94 |
0.97 |
0.29 |
0.95 |
0.98 |
chr5 | 97809914 | 97815940 | chr5:97809914-97815940:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.81 |
0.77 |
0.7 |
0.58 |
0.91 |
0.31 |
0.95 |
0.96 |
0.43 |
0.94 |
0.98 |
chr5 | 98022598 | 98025962 | chr5:98022598-98025962:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.03 |
0.92 |
0.89 |
0.78 |
0.92 |
0.96 |
0.81 |
0.95 |
0.97 |
0.71 |
0.97 |
0.98 |
chr5 | 98113450 | 98119596 | chr5:98113450-98119596:+:L1PA5:REF | L1PA5 | REF | full-length | LINC01846 | 0.02 |
0.84 |
0.63 |
0.08 |
0.84 |
0.94 |
0.04 |
0.95 |
0.96 |
0.21 |
0.97 |
0.97 |
chr5 | 98342992 | 98349146 | chr5:98342992-98349146:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | 0.67 |
— | 0.61 |
— | — | — | 0.99 |
— |
chr5 | 98546665 | 98552701 | chr5:98546665-98552701:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.38 |
0.56 |
0.49 |
0.44 |
0.79 |
0.48 |
0.96 |
0.97 |
0.28 |
0.67 |
0.98 |
chr5 | 98737215 | 98739296 | chr5:98737215-98739296:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.01 |
0.94 |
0.7 |
0.35 |
0.88 |
0.95 |
0.2 |
0.91 |
0.94 |
0.31 |
0.94 |
0.98 |
chr5 | 99037312 | 99043760 | chr5:99037312-99043760:+:L1PA7:REF | L1PA7 | REF | full-length | — | — | — | 0.99 |
— | 0.88 |
0.76 |
0.59 |
— | — | 0.92 |
0.94 |
0.74 |
chr5 | 99146176 | 99152358 | chr5:99146176-99152358:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
— | 0.73 |
0.02 |
— | — | 0.24 |
— | — | 0.65 |
0.55 |
— |
chr5 | 99339615 | 99345764 | chr5:99339615-99345764:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | 0.54 |
— | — | 0.49 |
0.17 |
— | — | 0.59 |
0.52 |
0.79 |
chr5 | 99557743 | 99563900 | chr5:99557743-99563900:-:L1PA4:REF | L1PA4 | REF | full-length | LINC02113 | 0.0 |
0.39 |
0.75 |
0.05 |
0.7 |
0.54 |
0.42 |
0.5 |
0.88 |
0.68 |
0.53 |
0.87 |
chr5 | 99855982 | 99861944 | chr5:99855982-99861944:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.04 |
— | 0.95 |
0.66 |
0.41 |
0.84 |
0.81 |
0.85 |
0.97 |
0.92 |
0.83 |
0.97 |
chr5 | 100458104 | 100464295 | chr5:100458104-100464295:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.05 |
0.86 |
0.9 |
0.72 |
0.9 |
0.8 |
0.72 |
0.92 |
0.83 |
0.96 |
0.88 |
0.91 |
chr5 | 100930088 | 100936228 | chr5:100930088-100936228:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.17 |
0.92 |
0.28 |
0.52 |
0.8 |
0.24 |
0.02 |
0.36 |
0.85 |
0.4 |
0.36 |
0.94 |
chr5 | 101162855 | 101168997 | chr5:101162855-101168997:+:L1PA6:REF | L1PA6 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.08 |
— |
chr5 | 101180130 | 101186147 | chr5:101180130-101186147:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.08 |
0.91 |
0.75 |
0.71 |
0.83 |
0.71 |
0.48 |
0.78 |
0.9 |
0.69 |
0.71 |
0.98 |
chr5 | 101528902 | 101530875 | chr5:101528902-101530875:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.01 |
0.91 |
0.66 |
0.51 |
0.88 |
0.61 |
0.38 |
0.61 |
0.93 |
0.72 |
0.57 |
0.97 |
chr5 | 101567218 | 101567614 | chr5:101567218-101567614:-:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.02 |
0.97 |
0.91 |
0.52 |
0.91 |
0.75 |
0.06 |
0.75 |
0.97 |
0.9 |
0.71 |
0.98 |
chr5 | 102131356 | 102137385 | chr5:102131356-102137385:+:L1HS:REF | L1HS | REF | full-length | — | 0.01 |
0.92 |
0.95 |
0.68 |
0.15 |
0.83 |
0.88 |
0.78 |
0.92 |
0.94 |
0.77 |
0.97 |
chr5 | 102177894 | 102179967 | chr5:102177894-102179967:-:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.0 |
0.95 |
0.49 |
0.06 |
0.69 |
0.45 |
0.13 |
0.37 |
0.92 |
0.48 |
0.44 |
0.8 |
chr5 | 102189483 | 102194435 | chr5:102189483-102194435:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.05 |
0.96 |
0.84 |
0.61 |
0.17 |
0.77 |
0.91 |
0.76 |
0.92 |
0.82 |
0.82 |
0.97 |
chr5 | 102671229 | 102677260 | chr5:102671229-102677260:+:L1PA2:REF | L1PA2 | REF | full-length | LINC00491 | 0.1 |
0.91 |
0.9 |
0.8 |
0.12 |
0.88 |
0.45 |
0.92 |
0.85 |
0.01 |
0.96 |
0.98 |
chr5 | 103046752 | 103052769 | chr5:103046752-103052769:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.35 |
0.98 |
0.94 |
0.85 |
0.36 |
0.9 |
0.84 |
0.91 |
0.95 |
0.95 |
0.93 |
0.97 |
chr5 | 104074362 | 104080381 | chr5:104074362-104080381:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.0 |
0.49 |
0.92 |
0.41 |
0.42 |
0.78 |
0.34 |
0.85 |
0.96 |
0.43 |
0.87 |
0.01 |
chr5 | 104446375 | 104452406 | chr5:104446375-104452406:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.08 |
0.98 |
0.73 |
0.76 |
0.09 |
0.8 |
0.81 |
0.86 |
0.98 |
0.88 |
0.95 |
0.98 |
chr5 | 104518587 | 104524616 | chr5:104518587-104524616:+:L1HS:REF | L1HS | REF | full-length | — | — | 0.95 |
0.79 |
— | 0.84 |
0.85 |
0.88 |
— | 0.95 |
0.89 |
0.96 |
— |