Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr5 | 67780007 | 67786186 | chr5:67780007-67786186:+:L1PA3:REF | L1PA3 | REF | full-length | LOC101928858 | 0.04 |
0.79 |
0.74 |
0.47 |
0.68 |
0.85 |
0.89 |
0.79 |
0.73 |
0.1 |
0.7 |
0.92 |
chr5 | 67817944 | 67823959 | chr5:67817944-67823959:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
0.89 |
0.75 |
0.47 |
0.06 |
0.95 |
0.98 |
0.81 |
0.8 |
0.77 |
0.65 |
0.83 |
chr5 | 67889604 | 67895628 | chr5:67889604-67895628:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.94 |
0.93 |
0.67 |
0.12 |
0.94 |
0.89 |
0.76 |
0.96 |
0.46 |
0.85 |
0.95 |
chr5 | 68691640 | 68697661 | chr5:68691640-68697661:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.57 |
0.86 |
0.83 |
0.38 |
0.87 |
0.93 |
0.74 |
0.83 |
0.93 |
0.77 |
0.64 |
0.92 |
chr5 | 68864954 | 68871442 | chr5:68864954-68871442:+:L1PA7:REF | L1PA7 | REF | full-length | — | — | — | — | — | — | — | 0.67 |
— | — | — | 0.69 |
— |
chr5 | 71604580 | 71610593 | chr5:71604580-71610593:-:L1PA2:REF | L1PA2 | REF | full-length | MCCC2 | 0.97 |
0.94 |
0.98 |
0.97 |
0.92 |
0.98 |
0.96 |
0.95 |
0.98 |
0.98 |
0.98 |
0.98 |
chr5 | 72577317 | 72583458 | chr5:72577317-72583458:+:L1PA4:REF | L1PA4 | REF | full-length | LINC02056 | 0.88 |
0.96 |
0.9 |
0.92 |
0.92 |
0.92 |
0.57 |
0.96 |
0.95 |
0.95 |
0.96 |
0.97 |
chr5 | 73874410 | 73880569 | chr5:73874410-73880569:-:L1PA3:REF | L1PA3 | REF | full-length | ARHGEF28 | — | 0.98 |
0.97 |
0.85 |
0.91 |
0.96 |
0.98 |
0.96 |
0.95 |
0.94 |
0.98 |
0.98 |
chr5 | 74706305 | 74712443 | chr5:74706305-74712443:+:L1PA3:REF | L1PA3 | REF | full-length | HEXB | 0.89 |
0.88 |
0.92 |
0.93 |
0.94 |
0.89 |
0.89 |
0.89 |
0.9 |
0.91 |
0.94 |
0.98 |
chr5 | 75098286 | 75103059 | chr5:75098286-75103059:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | ANKRD31 | — | — | — | — | — | — | — | — | — | — | 0.56 |
— |
chr5 | 75129665 | 75129959 | chr5:75129665-75129959:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | ANKRD31 | 0.0 |
0.93 |
0.85 |
0.47 |
0.92 |
0.71 |
0.53 |
0.62 |
0.93 |
0.73 |
0.7 |
0.96 |
chr5 | 75175748 | 75182091 | chr5:75175748-75182091:+:L1PA4:REF | L1PA4 | REF | full-length | ANKRD31 | 0.09 |
0.96 |
0.93 |
0.92 |
0.91 |
0.9 |
0.83 |
0.86 |
0.96 |
0.86 |
0.86 |
0.94 |
chr5 | 75642235 | 75648286 | chr5:75642235-75648286:+:L1PA2:REF | L1PA2 | REF | full-length | ANKDD1B | 0.86 |
0.93 |
0.96 |
0.88 |
0.45 |
0.97 |
0.95 |
0.96 |
0.95 |
0.96 |
0.98 |
0.98 |
chr5 | 75695698 | 75701728 | chr5:75695698-75701728:+:L1PA3:REF | L1PA3 | REF | full-length | POC5 | 0.45 |
0.33 |
0.97 |
0.98 |
0.68 |
0.97 |
0.96 |
0.98 |
0.91 |
0.32 |
0.97 |
0.97 |
chr5 | 75896065 | 75902234 | chr5:75896065-75902234:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.76 |
0.64 |
0.21 |
0.84 |
0.56 |
— | 0.59 |
0.91 |
0.32 |
0.56 |
0.65 |
chr5 | 76032249 | 76038204 | chr5:76032249-76038204:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.12 |
0.03 |
0.32 |
0.17 |
0.15 |
0.06 |
0.27 |
0.26 |
0.02 |
0.5 |
0.81 |
chr5 | 77474802 | 77480837 | chr5:77474802-77480837:+:L1PA3:REF | L1PA3 | REF | full-length | WDR41 | 0.24 |
0.56 |
0.87 |
0.82 |
0.63 |
0.76 |
0.8 |
0.74 |
0.87 |
0.71 |
0.89 |
0.89 |
chr5 | 77500904 | 77507049 | chr5:77500904-77507049:+:L1PA6:REF | L1PA6 | REF | full-length | WDR41 | — | — | — | — | — | — | — | — | — | — | 0.03 |
— |
chr5 | 78118215 | 78124355 | chr5:78118215-78124355:+:L1PA4:REF | L1PA4 | REF | full-length | AP3B1 | 0.98 |
0.98 |
0.99 |
0.98 |
0.95 |
0.99 |
0.99 |
0.99 |
0.97 |
0.98 |
0.98 |
0.98 |
chr5 | 78452185 | 78458210 | chr5:78452185-78458210:-:L1PA2:REF | L1PA2 | REF | full-length | SCAMP1 | 0.94 |
0.97 |
0.97 |
0.92 |
0.17 |
0.95 |
0.98 |
0.91 |
0.88 |
0.12 |
0.97 |
0.98 |
chr5 | 78681963 | 78688078 | chr5:78681963-78688078:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.84 |
0.95 |
— | 0.95 |
0.92 |
0.91 |
0.88 |
0.94 |
0.92 |
0.95 |
0.95 |
0.97 |
chr5 | 78848085 | 78854204 | chr5:78848085-78854204:-:L1PA3:REF | L1PA3 | REF | full-length | ARSB | 0.15 |
0.97 |
0.97 |
0.97 |
0.93 |
0.95 |
0.95 |
0.95 |
0.96 |
0.94 |
0.91 |
— |
chr5 | 78866805 | 78872828 | chr5:78866805-78872828:+:L1PA2:REF | L1PA2 | REF | full-length | ARSB | 0.56 |
0.98 |
0.98 |
0.92 |
0.43 |
0.96 |
0.98 |
0.97 |
0.98 |
0.96 |
0.93 |
0.99 |
chr5 | 78939282 | 78945425 | chr5:78939282-78945425:-:L1PA4:REF | L1PA4 | REF | full-length | ARSB | 0.29 |
0.93 |
0.96 |
0.91 |
0.92 |
0.97 |
0.98 |
0.98 |
0.97 |
0.93 |
0.97 |
0.97 |
chr5 | 79095899 | 79101910 | chr5:79095899-79101910:-:L1PA3:REF | L1PA3 | REF | full-length | BHMT2 | — | — | — | — | — | — | — | — | — | — | 0.77 |
— |
chr5 | 79778884 | 79784938 | chr5:79778884-79784938:-:L1HS:REF | L1HS | REF | full-length | CMYA5 | 0.28 |
0.64 |
0.97 |
0.58 |
0.06 |
0.71 |
0.48 |
0.65 |
0.44 |
0.68 |
0.84 |
0.98 |
chr5 | 79902294 | 79908448 | chr5:79902294-79908448:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
— | 0.88 |
0.44 |
0.78 |
0.62 |
0.68 |
0.8 |
— | 0.75 |
0.83 |
0.93 |
chr5 | 79910994 | 79917108 | chr5:79910994-79917108:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.04 |
— | 0.91 |
0.03 |
0.7 |
0.16 |
0.03 |
0.12 |
— | 0.74 |
0.25 |
— |
chr5 | 80391144 | 80397265 | chr5:80391144-80397265:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.52 |
0.97 |
0.95 |
0.94 |
0.91 |
0.78 |
0.88 |
0.91 |
0.97 |
0.95 |
0.81 |
0.97 |
chr5 | 81028683 | 81034148 | chr5:81028683-81034148:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | RASGRF2 | 0.02 |
— | — | 0.47 |
— | 0.62 |
— | — | — | 0.89 |
0.98 |
0.9 |
chr5 | 81373066 | 81379495 | chr5:81373066-81379495:+:L1PA7:REF | L1PA7 | REF | full-length | ACOT12 | 0.02 |
0.97 |
0.96 |
0.67 |
0.9 |
0.82 |
0.73 |
0.9 |
0.93 |
0.92 |
0.88 |
— |
chr5 | 81591849 | 81598022 | chr5:81591849-81598022:+:L1PA4:REF | L1PA4 | REF | full-length | SSBP2 | 0.97 |
0.94 |
0.97 |
0.97 |
0.89 |
0.98 |
0.81 |
0.98 |
0.98 |
0.97 |
0.98 |
0.98 |
chr5 | 81616090 | 81622140 | chr5:81616090-81622140:+:L1HS:REF | L1HS | REF | full-length | SSBP2 | 0.98 |
0.98 |
0.98 |
0.98 |
0.1 |
0.85 |
0.89 |
0.88 |
0.56 |
0.97 |
0.98 |
0.99 |
chr5 | 82429400 | 82435423 | chr5:82429400-82435423:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.38 |
0.95 |
0.94 |
0.84 |
0.11 |
0.9 |
0.93 |
0.91 |
0.91 |
0.93 |
0.9 |
0.98 |
chr5 | 82932443 | 82938460 | chr5:82932443-82938460:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.34 |
0.95 |
0.97 |
0.79 |
0.87 |
0.86 |
0.84 |
0.92 |
0.93 |
0.05 |
0.95 |
0.98 |
chr5 | 83457799 | 83463817 | chr5:83457799-83463817:-:L1PA2:REF | L1PA2 | REF | full-length | VCAN | 0.18 |
0.86 |
0.81 |
0.77 |
0.09 |
0.81 |
0.79 |
0.83 |
0.81 |
— | 0.84 |
0.77 |
chr5 | 83793611 | 83799642 | chr5:83793611-83799642:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.9 |
0.91 |
0.78 |
0.12 |
0.82 |
0.63 |
0.95 |
0.9 |
0.82 |
0.97 |
0.99 |
chr5 | 84050337 | 84056479 | chr5:84050337-84056479:+:L1PA5:REF | L1PA5 | REF | full-length | EDIL3 | 0.01 |
0.74 |
0.95 |
0.69 |
0.93 |
0.64 |
0.33 |
0.97 |
0.97 |
0.85 |
0.97 |
0.99 |
chr5 | 85638451 | 85644538 | chr5:85638451-85644538:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
0.07 |
0.91 |
0.88 |
0.13 |
0.76 |
0.79 |
0.53 |
0.74 |
0.01 |
0.66 |
0.81 |
chr5 | 85657593 | 85663641 | chr5:85657593-85663641:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.0 |
0.28 |
0.83 |
0.52 |
0.06 |
0.66 |
0.86 |
0.76 |
0.88 |
0.01 |
0.7 |
0.9 |
chr5 | 86265809 | 86271139 | chr5:86265809-86271139:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.02 |
0.82 |
0.66 |
0.29 |
0.85 |
0.46 |
0.12 |
0.61 |
0.92 |
0.74 |
0.59 |
0.98 |
chr5 | 86510690 | 86516743 | chr5:86510690-86516743:+:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.91 |
0.87 |
0.81 |
0.06 |
0.8 |
0.88 |
0.83 |
0.94 |
0.89 |
0.82 |
0.98 |
chr5 | 86772323 | 86778600 | chr5:86772323-86778600:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.43 |
0.59 |
0.12 |
0.94 |
0.44 |
0.36 |
0.56 |
0.98 |
0.63 |
0.49 |
0.97 |
chr5 | 87212103 | 87218330 | chr5:87212103-87218330:-:L1PA7:REF | L1PA7 | REF | full-length | LOC101929380 | 0.08 |
0.85 |
0.96 |
0.63 |
0.85 |
0.92 |
0.75 |
0.98 |
0.95 |
0.93 |
0.85 |
0.99 |
chr5 | 87918991 | 87925112 | chr5:87918991-87925112:-:L1PA6:REF | L1PA6 | REF | full-length | — | 0.01 |
0.49 |
0.59 |
0.35 |
0.83 |
0.32 |
0.37 |
0.73 |
0.72 |
0.6 |
0.12 |
0.79 |
chr5 | 88009454 | 88015622 | chr5:88009454-88015622:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.03 |
0.35 |
0.94 |
0.37 |
0.88 |
0.74 |
0.21 |
0.71 |
0.93 |
0.49 |
0.72 |
0.99 |
chr5 | 88052330 | 88058345 | chr5:88052330-88058345:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.79 |
0.74 |
0.58 |
0.1 |
0.53 |
0.77 |
0.74 |
0.73 |
0.81 |
0.59 |
0.84 |
chr5 | 88305753 | 88310434 | chr5:88305753-88310434:+:L1P2:REF | L1P2 | REF | 3prime-truncated | TMEM161B-AS1 | — | — | — | — | — | — | — | — | — | — | 0.63 |
— |
chr5 | 89219912 | 89224332 | chr5:89219912-89224332:+:L1P2:REF | L1P2 | REF | 3prime-truncated | MEF2C-AS1 | 0.39 |
0.94 |
0.97 |
0.69 |
0.9 |
0.96 |
0.12 |
0.95 |
0.98 |
0.97 |
0.95 |
0.99 |
chr5 | 89621547 | 89627683 | chr5:89621547-89627683:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.12 |
0.57 |
0.49 |
0.48 |
0.61 |
0.74 |
0.41 |
0.52 |
0.67 |
0.5 |
0.47 |
0.98 |