Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr13 | 79839668 | 79845817 | chr13:79839668-79845817:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.72 |
0.89 |
0.79 |
0.84 |
0.88 |
0.79 |
0.93 |
0.89 |
0.85 |
0.9 |
— |
chr13 | 79957808 | 79959548 | chr13:79957808-79959548:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.04 |
0.22 |
0.12 |
0.04 |
0.17 |
0.08 |
0.24 |
0.14 |
0.33 |
0.12 |
0.14 |
0.17 |
chr13 | 80151905 | 80153647 | chr13:80151905-80153647:+:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.02 |
0.98 |
0.99 |
0.84 |
0.93 |
0.97 |
0.87 |
0.99 |
0.95 |
0.82 |
0.98 |
0.97 |
chr13 | 80516861 | 80522982 | chr13:80516861-80522982:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.0 |
0.17 |
0.39 |
0.03 |
— | 0.26 |
0.03 |
0.27 |
— | 0.27 |
0.31 |
— |
chr13 | 80707860 | 80708582 | chr13:80707860-80708582:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.01 |
— | 0.73 |
0.41 |
0.9 |
0.66 |
0.43 |
0.72 |
0.78 |
0.69 |
0.71 |
— |
chr13 | 81064093 | 81070238 | chr13:81064093-81070238:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.81 |
0.83 |
0.6 |
0.65 |
0.6 |
0.53 |
0.68 |
0.85 |
0.9 |
0.66 |
0.96 |
chr13 | 82045349 | 82051380 | chr13:82045349-82051380:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.94 |
0.79 |
0.92 |
0.69 |
0.78 |
0.76 |
0.8 |
0.96 |
0.89 |
0.79 |
0.97 |
chr13 | 82229018 | 82235152 | chr13:82229018-82235152:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | 0.61 |
— | — | 0.61 |
0.46 |
0.6 |
— | 0.76 |
0.6 |
0.96 |
chr13 | 83171180 | 83175035 | chr13:83171180-83175035:+:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.09 |
— | — | — | — | — | 0.14 |
— | — | — | 0.93 |
— |
chr13 | 83754136 | 83757401 | chr13:83754136-83757401:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.01 |
0.91 |
0.46 |
0.58 |
0.86 |
0.4 |
0.06 |
0.42 |
0.84 |
0.33 |
0.38 |
0.96 |
chr13 | 85123204 | 85129221 | chr13:85123204-85129221:+:L1PA2:REF | L1PA2 | REF | full-length | LINC00375 | 0.01 |
0.98 |
0.94 |
0.81 |
0.68 |
0.87 |
0.64 |
0.89 |
0.96 |
0.88 |
0.93 |
0.93 |
chr13 | 85911792 | 85917919 | chr13:85911792-85917919:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.03 |
0.49 |
0.58 |
0.73 |
0.86 |
0.62 |
0.18 |
0.79 |
0.92 |
0.82 |
0.75 |
0.91 |
chr13 | 89087885 | 89093918 | chr13:89087885-89093918:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.04 |
0.8 |
0.92 |
0.9 |
0.13 |
0.82 |
0.78 |
0.88 |
0.95 |
0.66 |
0.88 |
0.99 |
chr13 | 90663982 | 90669995 | chr13:90663982-90669995:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.04 |
0.95 |
0.86 |
0.74 |
0.55 |
0.85 |
0.81 |
0.84 |
0.97 |
0.89 |
0.84 |
0.98 |
chr13 | 92685561 | 92691592 | chr13:92685561-92691592:-:L1HS:REF | L1HS | REF | full-length | GPC5 | 0.02 |
0.84 |
0.88 |
0.87 |
0.28 |
0.82 |
0.78 |
0.87 |
0.92 |
0.92 |
0.81 |
0.89 |
chr13 | 92752475 | 92758488 | chr13:92752475-92758488:+:L1PA3:REF | L1PA3 | REF | full-length | GPC5 | 0.04 |
0.29 |
0.93 |
0.89 |
0.46 |
0.89 |
0.93 |
0.96 |
0.94 |
0.95 |
0.96 |
0.88 |
chr13 | 93490518 | 93496537 | chr13:93490518-93496537:-:L1PA2:REF | L1PA2 | REF | full-length | GPC6 | 0.02 |
0.58 |
0.9 |
0.63 |
0.47 |
0.92 |
0.99 |
0.98 |
— | — | 0.95 |
0.88 |
chr13 | 94372199 | 94378191 | chr13:94372199-94378191:+:L1PA3:REF | L1PA3 | REF | full-length | GPC6 | 0.06 |
0.91 |
0.97 |
0.67 |
0.18 |
0.93 |
0.97 |
0.97 |
0.86 |
0.95 |
0.97 |
0.81 |
chr13 | 96326180 | 96332208 | chr13:96326180-96332208:-:L1PA4:REF | L1PA4 | REF | full-length | HS6ST3 | 0.01 |
0.96 |
0.94 |
0.69 |
0.19 |
0.73 |
0.7 |
0.74 |
0.9 |
0.46 |
0.69 |
0.82 |
chr13 | 97592979 | 97595999 | chr13:97592979-97595999:+:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.0 |
0.29 |
0.65 |
0.03 |
0.66 |
0.23 |
0.01 |
0.34 |
0.88 |
0.05 |
0.33 |
0.6 |
chr13 | 97607659 | 97613767 | chr13:97607659-97613767:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
— | — | — | — | — | — | — | — | — | 0.82 |
0.97 |
chr13 | 97667408 | 97673440 | chr13:97667408-97673440:-:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.96 |
0.9 |
0.74 |
0.27 |
0.83 |
0.83 |
0.86 |
0.91 |
0.9 |
0.89 |
0.95 |
chr13 | 97730412 | 97736443 | chr13:97730412-97736443:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.06 |
0.96 |
0.97 |
0.75 |
0.97 |
0.83 |
0.78 |
0.88 |
0.97 |
0.92 |
0.87 |
0.96 |
chr13 | 100698082 | 100704117 | chr13:100698082-100704117:+:L1PA2:REF | L1PA2 | REF | full-length | NALCN-AS1 | 0.44 |
0.89 |
0.88 |
0.65 |
0.39 |
0.79 |
0.77 |
0.85 |
0.84 |
0.87 |
0.87 |
0.89 |
chr13 | 102522020 | 102528176 | chr13:102522020-102528176:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
0.17 |
0.74 |
0.41 |
0.9 |
0.5 |
0.42 |
0.53 |
0.91 |
0.26 |
0.61 |
0.68 |
chr13 | 104340349 | 104346508 | chr13:104340349-104346508:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.9 |
0.88 |
0.65 |
0.92 |
0.77 |
0.49 |
0.9 |
0.97 |
0.62 |
0.89 |
0.98 |
chr13 | 105382665 | 105383251 | chr13:105382665-105383251:-:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.01 |
0.85 |
0.95 |
0.91 |
0.5 |
0.84 |
0.72 |
0.91 |
0.94 |
0.85 |
0.97 |
0.93 |
chr13 | 106213540 | 106219555 | chr13:106213540-106219555:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.94 |
0.96 |
0.82 |
0.13 |
0.97 |
0.8 |
0.97 |
0.93 |
0.91 |
0.98 |
0.41 |
chr13 | 106778245 | 106784404 | chr13:106778245-106784404:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.37 |
0.94 |
0.55 |
0.88 |
0.57 |
0.69 |
0.84 |
0.95 |
0.89 |
0.84 |
0.83 |
chr13 | 106929331 | 106935363 | chr13:106929331-106935363:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.99 |
0.96 |
0.81 |
0.43 |
0.9 |
0.9 |
0.94 |
0.97 |
0.97 |
0.92 |
0.92 |
chr13 | 107920656 | 107926706 | chr13:107920656-107926706:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.08 |
0.94 |
0.42 |
0.14 |
0.11 |
0.38 |
0.19 |
0.49 |
0.59 |
0.25 |
0.47 |
0.44 |
chr13 | 108510472 | 108516495 | chr13:108510472-108516495:-:L1HS:REF | L1HS | REF | full-length | — | 0.76 |
0.95 |
0.91 |
0.79 |
0.11 |
0.82 |
0.83 |
0.88 |
0.85 |
0.62 |
0.87 |
0.9 |
chr13 | 109827662 | 109829507 | chr13:109827662-109829507:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | — | — | — | — | — | — | — | — | — | — | 0.0 |
— |
chr14 | 18283818 | 18289864 | chr14:18283818-18289864:-:L1HS:REF | L1HS | REF | full-length | — | — | 0.46 |
— | 0.54 |
0.06 |
0.72 |
— | — | — | — | 0.7 |
— |
chr14 | 20230574 | 20236301 | chr14:20230574-20236301:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | OR11H7 | 0.97 |
0.86 |
0.87 |
0.88 |
0.26 |
0.84 |
0.68 |
0.89 |
0.84 |
0.54 |
0.89 |
0.85 |
chr14 | 20910598 | 20916745 | chr14:20910598-20916745:+:L1PA3:REF | L1PA3 | REF | full-length | ECRP | 0.01 |
0.93 |
0.89 |
— | 0.87 |
0.73 |
0.82 |
0.73 |
0.92 |
0.9 |
0.76 |
0.91 |
chr14 | 21690008 | 21690241 | chr14:21690008-21690241:+:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.0 |
0.72 |
— | 0.21 |
— | 0.57 |
0.44 |
— | — | 0.78 |
0.72 |
0.85 |
chr14 | 21760073 | 21766285 | chr14:21760073-21766285:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.0 |
0.34 |
0.58 |
0.01 |
0.85 |
0.09 |
0.03 |
0.17 |
0.72 |
0.44 |
0.23 |
0.15 |
chr14 | 22348921 | 22355065 | chr14:22348921-22355065:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.04 |
0.58 |
0.7 |
0.38 |
0.83 |
0.53 |
0.27 |
0.6 |
0.89 |
0.68 |
0.65 |
0.42 |
chr14 | 22615641 | 22621763 | chr14:22615641-22621763:-:L1PA4:REF | L1PA4 | REF | full-length | ABHD4 | 0.65 |
0.96 |
0.95 |
0.97 |
0.94 |
0.96 |
0.74 |
0.98 |
0.95 |
0.95 |
0.97 |
0.97 |
chr14 | 24491435 | 24497569 | chr14:24491435-24497569:+:L1PA5:REF | L1PA5 | REF | full-length | LOC101927045 | 0.06 |
0.47 |
— | 0.19 |
0.73 |
0.46 |
0.27 |
0.64 |
— | 0.54 |
0.65 |
— |
chr14 | 24523704 | 24523706 | chr14:24523704-24523706:-:L1HS:NONREF | L1HS | KNR | — | — | — | 0.79 |
— | — | — | — | — | — | — | — | — | — |
chr14 | 24525954 | 24532097 | chr14:24525954-24532097:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.41 |
0.89 |
0.12 |
0.39 |
0.47 |
0.08 |
0.58 |
0.85 |
0.4 |
0.65 |
0.84 |
chr14 | 24948620 | 24948622 | chr14:24948620-24948622:-:L1HS:NONREF | L1HS | KNR | — | STXBP6 | — | — | — | 0.58 |
— | — | — | — | — | — | — | — |
chr14 | 25136427 | 25138236 | chr14:25136427-25138236:+:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.02 |
0.4 |
0.61 |
0.04 |
0.8 |
0.73 |
0.14 |
0.66 |
0.91 |
0.33 |
0.63 |
0.28 |
chr14 | 25167086 | 25173204 | chr14:25167086-25173204:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.29 |
0.51 |
0.05 |
0.7 |
0.49 |
0.23 |
0.57 |
0.76 |
0.32 |
0.51 |
0.52 |
chr14 | 25183427 | 25189539 | chr14:25183427-25189539:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.12 |
0.26 |
0.04 |
0.63 |
0.46 |
0.03 |
0.37 |
0.73 |
0.1 |
0.46 |
0.48 |
chr14 | 25207166 | 25210563 | chr14:25207166-25210563:-:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.02 |
0.82 |
0.96 |
0.68 |
0.2 |
0.83 |
0.92 |
0.88 |
0.95 |
0.58 |
0.86 |
0.84 |
chr14 | 25367219 | 25370680 | chr14:25367219-25370680:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.02 |
0.33 |
0.35 |
0.12 |
0.81 |
0.43 |
0.4 |
0.45 |
0.87 |
0.17 |
0.45 |
0.4 |
chr14 | 25580747 | 25586334 | chr14:25580747-25586334:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.0 |
0.7 |
0.53 |
0.09 |
0.85 |
0.55 |
0.33 |
0.54 |
0.92 |
0.28 |
0.63 |
0.74 |