Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr16 | 46489860 | 46496028 | chr16:46489860-46496028:+:L1PA4:REF | L1PA4 | REF | full-length | ANKRD26P1 | 0.01 |
0.04 |
0.29 |
0.46 |
0.66 |
0.55 |
0.31 |
— | 0.74 |
0.17 |
0.6 |
0.64 |
chr16 | 46535347 | 46541495 | chr16:46535347-46541495:+:L1PA3:REF | L1PA3 | REF | full-length | ANKRD26P1 | — | — | — | — | 0.83 |
0.71 |
0.5 |
— | — | 0.5 |
0.81 |
0.81 |
chr16 | 47182757 | 47188783 | chr16:47182757-47188783:+:L1PA3:REF | L1PA3 | REF | full-length | ITFG1 | 0.96 |
0.97 |
0.97 |
0.97 |
0.94 |
0.98 |
0.97 |
0.99 |
0.98 |
0.95 |
0.98 |
0.98 |
chr16 | 47347059 | 47353218 | chr16:47347059-47353218:+:L1PA4:REF | L1PA4 | REF | full-length | ITFG1 | — | — | — | — | — | — | — | — | — | — | 0.94 |
— |
chr16 | 47437710 | 47443907 | chr16:47437710-47443907:+:L1PA4:REF | L1PA4 | REF | full-length | ITFG1 | 0.97 |
0.96 |
0.97 |
0.98 |
0.91 |
0.97 |
0.98 |
0.96 |
0.96 |
0.95 |
0.98 |
0.97 |
chr16 | 47541007 | 47547243 | chr16:47541007-47547243:-:L1PA6:REF | L1PA6 | REF | full-length | PHKB | 0.96 |
0.99 |
0.97 |
0.97 |
0.87 |
0.97 |
0.98 |
0.97 |
0.99 |
0.96 |
0.98 |
0.98 |
chr16 | 47677770 | 47683912 | chr16:47677770-47683912:-:L1PA4:REF | L1PA4 | REF | full-length | PHKB | 0.94 |
— | 0.93 |
0.99 |
0.92 |
0.97 |
0.97 |
0.98 |
— | 0.97 |
0.98 |
0.98 |
chr16 | 47807975 | 47814106 | chr16:47807975-47814106:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.96 |
0.64 |
0.44 |
0.89 |
0.56 |
0.48 |
0.65 |
0.91 |
0.1 |
0.65 |
0.78 |
chr16 | 47909897 | 47916004 | chr16:47909897-47916004:+:L1PA5:REF | L1PA5 | REF | full-length | LINC02133 | 0.0 |
0.24 |
0.32 |
0.11 |
0.87 |
0.36 |
0.04 |
0.4 |
0.9 |
0.02 |
0.35 |
0.4 |
chr16 | 48015465 | 48021489 | chr16:48015465-48021489:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.05 |
0.98 |
0.95 |
0.75 |
0.19 |
0.87 |
0.89 |
0.84 |
0.92 |
0.86 |
0.88 |
0.92 |
chr16 | 48666607 | 48668775 | chr16:48666607-48668775:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.05 |
0.31 |
0.09 |
0.11 |
— | 0.04 |
0.06 |
0.0 |
— | 0.0 |
0.11 |
0.08 |
chr16 | 48768571 | 48774603 | chr16:48768571-48774603:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.79 |
0.82 |
0.62 |
0.78 |
0.71 |
0.86 |
0.82 |
0.93 |
0.5 |
0.82 |
0.87 |
chr16 | 51329809 | 51335954 | chr16:51329809-51335954:+:L1PA5:REF | L1PA5 | REF | full-length | MIR548AI | 0.01 |
0.05 |
0.49 |
0.2 |
0.47 |
0.45 |
0.39 |
0.46 |
0.48 |
0.42 |
0.46 |
0.26 |
chr16 | 52333409 | 52339534 | chr16:52333409-52339534:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.94 |
0.94 |
0.02 |
0.93 |
0.49 |
0.95 |
0.52 |
0.96 |
0.22 |
0.24 |
0.32 |
chr16 | 52973416 | 52976027 | chr16:52973416-52976027:-:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.0 |
0.8 |
0.95 |
0.19 |
0.85 |
0.66 |
0.72 |
0.64 |
0.93 |
0.36 |
0.69 |
0.83 |
chr16 | 53344431 | 53350517 | chr16:53344431-53350517:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.03 |
— | 0.94 |
0.79 |
— | 0.58 |
0.67 |
0.75 |
— | 0.73 |
0.76 |
— |
chr16 | 53396916 | 53402916 | chr16:53396916-53402916:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.24 |
0.51 |
0.95 |
0.86 |
0.93 |
0.85 |
0.85 |
0.88 |
0.97 |
0.87 |
0.89 |
0.98 |
chr16 | 54042096 | 54048145 | chr16:54042096-54048145:+:L1HS:REF | L1HS | REF | full-length | FTO | 0.78 |
0.94 |
0.9 |
0.75 |
0.64 |
0.95 |
0.91 |
0.99 |
0.84 |
0.9 |
0.86 |
0.94 |
chr16 | 54661370 | 54665244 | chr16:54661370-54665244:+:L1P3:REF | L1P3 | REF | 3prime-truncated | — | — | — | — | — | — | — | — | — | — | — | 0.0 |
— |
chr16 | 55615451 | 55615846 | chr16:55615451-55615846:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.07 |
0.94 |
0.9 |
0.13 |
0.86 |
0.71 |
0.88 |
0.68 |
0.95 |
0.81 |
0.73 |
0.95 |
chr16 | 56154514 | 56160662 | chr16:56154514-56160662:+:L1PA3:REF | L1PA3 | REF | full-length | LOC283856 | 0.08 |
0.9 |
0.85 |
0.61 |
0.9 |
0.78 |
0.69 |
0.73 |
0.96 |
— | 0.68 |
0.85 |
chr16 | 56391235 | 56394461 | chr16:56391235-56394461:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | AMFR | — | 0.97 |
0.97 |
— | 0.93 |
— | 0.98 |
— | — | 0.96 |
0.98 |
— |
chr16 | 58779887 | 58785996 | chr16:58779887-58785996:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.2 |
0.92 |
0.37 |
0.16 |
0.89 |
0.56 |
0.42 |
0.54 |
0.93 |
0.15 |
0.58 |
0.56 |
chr16 | 58873142 | 58879266 | chr16:58873142-58879266:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.3 |
0.39 |
0.35 |
0.25 |
0.87 |
0.41 |
0.19 |
0.31 |
0.86 |
0.14 |
0.37 |
0.39 |
chr16 | 58918644 | 58921104 | chr16:58918644-58921104:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
0.27 |
0.48 |
0.0 |
0.89 |
0.38 |
0.06 |
0.22 |
0.84 |
0.02 |
0.21 |
0.09 |
chr16 | 58991471 | 58993354 | chr16:58991471-58993354:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.0 |
0.2 |
0.54 |
0.1 |
0.42 |
0.57 |
0.29 |
0.59 |
0.85 |
0.02 |
0.51 |
0.17 |
chr16 | 59363201 | 59365889 | chr16:59363201-59365889:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.35 |
0.7 |
0.59 |
0.64 |
0.92 |
0.84 |
0.67 |
0.84 |
0.94 |
0.42 |
0.86 |
0.8 |
chr16 | 59559294 | 59565319 | chr16:59559294-59565319:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.79 |
0.88 |
0.62 |
0.88 |
0.94 |
0.78 |
0.97 |
0.98 |
0.62 |
0.98 |
0.85 |
chr16 | 59809317 | 59815504 | chr16:59809317-59815504:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.01 |
0.39 |
0.33 |
0.11 |
0.89 |
0.68 |
0.09 |
0.55 |
0.94 |
0.08 |
0.54 |
0.42 |
chr16 | 59976601 | 59982619 | chr16:59976601-59982619:+:L1PA2:REF | L1PA2 | REF | full-length | LINC02141 | 0.01 |
0.5 |
0.39 |
0.35 |
0.59 |
0.73 |
0.34 |
0.47 |
0.74 |
0.1 |
0.53 |
0.57 |
chr16 | 60522745 | 60528760 | chr16:60522745-60528760:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.89 |
0.85 |
0.7 |
0.04 |
0.84 |
0.84 |
0.87 |
0.93 |
— | 0.82 |
0.9 |
chr16 | 60935971 | 60941164 | chr16:60935971-60941164:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | — | 0.55 |
0.48 |
0.12 |
0.83 |
0.64 |
0.44 |
0.63 |
0.91 |
0.28 |
— | 0.31 |
chr16 | 61782078 | 61788101 | chr16:61782078-61788101:+:L1PA2:REF | L1PA2 | REF | full-length | CDH8 | — | — | — | 0.94 |
0.12 |
— | 0.8 |
— | — | 0.49 |
0.78 |
0.79 |
chr16 | 61801455 | 61807489 | chr16:61801455-61807489:+:L1PA2:REF | L1PA2 | REF | full-length | CDH8 | 0.02 |
0.62 |
0.91 |
0.92 |
0.11 |
0.82 |
0.71 |
— | 0.93 |
0.35 |
0.74 |
0.82 |
chr16 | 62992368 | 62998492 | chr16:62992368-62998492:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | 0.86 |
— | 0.21 |
— | — | 0.04 |
0.65 |
0.77 |
chr16 | 63119951 | 63125975 | chr16:63119951-63125975:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.13 |
0.81 |
0.94 |
0.8 |
0.87 |
0.86 |
0.85 |
0.89 |
0.98 |
0.73 |
0.87 |
0.94 |
chr16 | 63819697 | 63821378 | chr16:63819697-63821378:+:L1P2:REF | L1P2 | REF | 3prime-truncated | — | — | — | 0.57 |
0.2 |
0.9 |
0.54 |
0.13 |
0.48 |
— | 0.02 |
0.53 |
0.08 |
chr16 | 65551127 | 65557278 | chr16:65551127-65557278:+:L1PA3:REF | L1PA3 | REF | full-length | LINC00922 | 0.05 |
0.96 |
0.88 |
0.45 |
0.88 |
0.94 |
0.44 |
0.96 |
0.94 |
0.31 |
0.94 |
0.52 |
chr16 | 65690011 | 65696020 | chr16:65690011-65696020:+:L1HS:REF | L1HS | REF | full-length | — | 0.15 |
0.97 |
0.95 |
0.64 |
0.49 |
0.94 |
0.78 |
0.94 |
0.97 |
— | 0.9 |
0.91 |
chr16 | 66495982 | 66500000 | chr16:66495982-66500000:+:L1P1:REF | L1P1 | REF | 3prime-truncated | BEAN1 | 0.06 |
0.99 |
0.92 |
0.92 |
0.91 |
0.9 |
0.71 |
0.88 |
0.97 |
0.76 |
0.88 |
0.97 |
chr16 | 68583448 | 68589505 | chr16:68583448-68589505:-:L1HS:REF | L1HS | REF | full-length | ZFP90 | 0.12 |
0.97 |
0.96 |
0.88 |
0.12 |
0.87 |
0.92 |
0.82 |
0.91 |
0.94 |
0.84 |
0.98 |
chr16 | 71508513 | 71511310 | chr16:71508513-71511310:-:L1P2:REF | L1P2 | REF | 3prime-truncated | LOC105371335 | — | — | — | — | — | — | — | 0.47 |
— | — | 0.14 |
— |
chr16 | 72324392 | 72329827 | chr16:72324392-72329827:+:L1P2:REF | L1P2 | REF | 3prime-truncated | LINC01572 | 0.02 |
0.68 |
0.87 |
0.65 |
0.82 |
0.84 |
0.94 |
0.72 |
0.89 |
0.77 |
0.73 |
0.95 |
chr16 | 72543204 | 72549689 | chr16:72543204-72549689:+:L1PA7:REF | L1PA7 | REF | full-length | LINC01572 | 0.69 |
0.96 |
0.92 |
0.69 |
0.93 |
0.98 |
0.96 |
0.96 |
0.96 |
0.97 |
0.95 |
0.99 |
chr16 | 72627274 | 72633298 | chr16:72627274-72633298:+:L1PA2:REF | L1PA2 | REF | full-length | LINC01572 | 0.01 |
0.37 |
0.35 |
0.9 |
0.03 |
0.87 |
0.01 |
0.85 |
0.48 |
0.01 |
— | 0.02 |
chr16 | 73824400 | 73830431 | chr16:73824400-73830431:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.04 |
0.75 |
0.93 |
0.67 |
0.19 |
0.77 |
0.81 |
0.9 |
0.95 |
0.71 |
0.8 |
0.83 |
chr16 | 75719124 | 75725286 | chr16:75719124-75725286:+:L1PA4:REF | L1PA4 | REF | full-length | CPHXL | 0.03 |
0.67 |
0.71 |
0.35 |
0.82 |
0.66 |
0.64 |
0.71 |
0.87 |
0.46 |
0.73 |
0.79 |
chr16 | 75821959 | 75827981 | chr16:75821959-75827981:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.91 |
0.88 |
0.77 |
— | 0.81 |
0.93 |
0.84 |
0.69 |
0.69 |
0.81 |
0.92 |
chr16 | 80136317 | 80142458 | chr16:80136317-80142458:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.38 |
0.5 |
0.06 |
0.77 |
0.77 |
0.16 |
0.65 |
0.9 |
0.08 |
0.59 |
0.06 |
chr16 | 80219706 | 80225843 | chr16:80219706-80225843:+:L1PA4:REF | L1PA4 | REF | full-length | LOC102724084 | — | — | — | 0.29 |
— | — | — | — | — | — | — | — |