Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr16 | 80727089 | 80730717 | chr16:80727089-80730717:+:L1HS:REF | L1HS | REF | 3prime-truncated | CDYL2 | 0.01 |
0.01 |
0.97 |
0.02 |
0.93 |
0.91 |
0.71 |
0.86 |
0.93 |
0.77 |
0.95 |
0.63 |
chr16 | 81977353 | 81978467 | chr16:81977353-81978467:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.12 |
0.19 |
0.95 |
0.67 |
0.86 |
0.78 |
0.84 |
0.67 |
0.94 |
0.71 |
0.87 |
0.91 |
chr16 | 82139255 | 82145258 | chr16:82139255-82145258:+:L1PA2:REF | L1PA2 | REF | full-length | MPHOSPH6 | 0.87 |
0.01 |
0.97 |
0.98 |
0.4 |
0.97 |
0.97 |
0.89 |
0.83 |
0.91 |
0.94 |
0.88 |
chr16 | 83637252 | 83643296 | chr16:83637252-83643296:+:L1HS:REF | L1HS | REF | full-length | CDH13 | 0.06 |
0.24 |
0.96 |
0.78 |
0.1 |
0.88 |
0.83 |
0.95 |
0.88 |
0.6 |
0.97 |
0.83 |
chr16 | 86233295 | 86239310 | chr16:86233295-86239310:+:L1PA3:REF | L1PA3 | REF | full-length | LINC01081 | 0.02 |
0.92 |
0.96 |
0.89 |
0.76 |
0.89 |
0.73 |
0.9 |
0.93 |
0.91 |
0.98 |
0.76 |
chr16 | 86262173 | 86268197 | chr16:86262173-86268197:+:L1PA2:REF | L1PA2 | REF | full-length | LINC01081 | 0.17 |
0.95 |
0.91 |
0.95 |
0.93 |
0.86 |
0.81 |
0.99 |
0.95 |
0.9 |
0.99 |
0.96 |
chr16 | 88851386 | 88852803 | chr16:88851386-88852803:+:L1P2:REF | L1P2 | REF | 3prime-truncated | GALNS | — | — | — | — | — | — | — | — | — | — | 0.68 |
— |
chr17 | 634396 | 640538 | chr17:634396-640538:-:L1PA5:REF | L1PA5 | REF | full-length | VPS53 | 0.96 |
0.97 |
0.9 |
0.88 |
0.95 |
0.85 |
0.91 |
0.94 |
0.98 |
0.89 |
0.9 |
0.98 |
chr17 | 3147366 | 3153409 | chr17:3147366-3153409:-:L1PA2:REF | L1PA2 | REF | full-length | LOC100288728 | 0.01 |
0.93 |
0.92 |
0.61 |
0.2 |
0.65 |
0.7 |
0.7 |
0.81 |
0.63 |
0.67 |
0.85 |
chr17 | 3176530 | 3182557 | chr17:3176530-3182557:+:L1PA2:REF | L1PA2 | REF | full-length | LOC100288728 | 0.14 |
0.95 |
0.76 |
0.76 |
0.28 |
0.78 |
0.87 |
0.78 |
0.63 |
0.72 |
0.46 |
0.82 |
chr17 | 3326580 | 3332726 | chr17:3326580-3332726:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.49 |
0.77 |
0.52 |
0.89 |
0.65 |
0.69 |
0.67 |
0.77 |
0.42 |
0.64 |
0.76 |
chr17 | 3337282 | 3343391 | chr17:3337282-3343391:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.37 |
0.19 |
0.18 |
0.82 |
0.43 |
— | 0.41 |
0.77 |
0.19 |
0.48 |
0.27 |
chr17 | 5572832 | 5574657 | chr17:5572832-5574657:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | NLRP1 | 0.95 |
0.59 |
0.75 |
0.63 |
0.91 |
0.91 |
0.51 |
0.88 |
0.89 |
0.38 |
0.94 |
0.97 |
chr17 | 6802481 | 6808614 | chr17:6802481-6808614:-:L1PA4:REF | L1PA4 | REF | full-length | TEKT1 | 0.02 |
0.0 |
0.94 |
0.65 |
0.91 |
0.78 |
0.81 |
0.7 |
0.95 |
0.46 |
0.77 |
0.96 |
chr17 | 6847201 | 6849659 | chr17:6847201-6849659:-:L1P3:REF | L1P3 | REF | 3prime-truncated | ALOX12P2 | 0.28 |
0.95 |
0.96 |
0.97 |
0.89 |
0.62 |
0.88 |
0.55 |
0.97 |
0.56 |
0.59 |
0.91 |
chr17 | 9615985 | 9622015 | chr17:9615985-9622015:+:L1HS:REF | L1HS | REF | full-length | CFAP52 | 0.12 |
0.97 |
0.95 |
0.88 |
0.1 |
0.85 |
0.91 |
0.84 |
0.89 |
0.92 |
0.8 |
0.96 |
chr17 | 11861025 | 11867172 | chr17:11861025-11867172:-:L1PA3:REF | L1PA3 | REF | full-length | DNAH9 | — | 0.46 |
0.9 |
0.8 |
0.93 |
0.77 |
0.66 |
0.79 |
0.95 |
0.49 |
0.78 |
0.92 |
chr17 | 12449903 | 12455932 | chr17:12449903-12455932:-:L1PA2:REF | L1PA2 | REF | full-length | — | — | 0.85 |
0.92 |
0.66 |
0.3 |
0.91 |
0.76 |
0.96 |
0.9 |
0.78 |
0.97 |
0.84 |
chr17 | 13855495 | 13861599 | chr17:13855495-13861599:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.89 |
0.71 |
0.14 |
0.83 |
0.56 |
0.59 |
0.71 |
0.95 |
0.77 |
0.81 |
0.92 |
chr17 | 15223343 | 15224561 | chr17:15223343-15224561:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | PMP22 | — | — | 0.74 |
0.0 |
0.9 |
1.0 |
0.06 |
0.91 |
0.91 |
0.47 |
0.92 |
0.96 |
chr17 | 26735774 | 26741856 | chr17:26735774-26741856:+:L1PA4:REF | L1PA4 | REF | full-length | — | — | 0.23 |
0.21 |
— | 0.65 |
0.42 |
— | — | 0.74 |
0.13 |
0.49 |
0.26 |
chr17 | 27039669 | 27045623 | chr17:27039669-27045623:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.65 |
0.09 |
0.8 |
0.56 |
0.83 |
0.61 |
0.73 |
0.66 |
0.87 |
0.51 |
0.63 |
0.81 |
chr17 | 27099164 | 27105176 | chr17:27099164-27105176:-:L1PA2:REF | L1PA2 | REF | full-length | LOC105371703 | 0.02 |
0.75 |
0.93 |
0.84 |
0.1 |
0.69 |
0.79 |
0.75 |
0.86 |
0.03 |
0.76 |
0.93 |
chr17 | 27249212 | 27255352 | chr17:27249212-27255352:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.27 |
0.96 |
0.94 |
0.83 |
0.89 |
0.7 |
0.42 |
0.82 |
0.85 |
0.8 |
0.83 |
0.94 |
chr17 | 30406814 | 30413023 | chr17:30406814-30413023:-:L1PA6:REF | L1PA6 | REF | full-length | CPD | 0.71 |
0.77 |
0.85 |
0.82 |
0.89 |
0.89 |
0.99 |
0.94 |
0.97 |
0.92 |
0.82 |
0.9 |
chr17 | 31664913 | 31671035 | chr17:31664913-31671035:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.99 |
0.79 |
0.51 |
0.76 |
0.79 |
0.55 |
0.74 |
0.92 |
0.77 |
0.84 |
0.96 |
chr17 | 32678257 | 32684272 | chr17:32678257-32684272:-:L1PA2:REF | L1PA2 | REF | full-length | MYO1D | 0.98 |
0.98 |
0.96 |
0.63 |
0.1 |
0.9 |
0.69 |
0.86 |
0.86 |
0.72 |
0.83 |
0.98 |
chr17 | 32887137 | 32893184 | chr17:32887137-32893184:+:L1PA2:REF | L1PA2 | REF | full-length | MYO1D | 0.53 |
0.96 |
0.96 |
0.59 |
0.28 |
0.9 |
0.96 |
0.9 |
0.94 |
0.95 |
0.84 |
0.96 |
chr17 | 34083021 | 34089185 | chr17:34083021-34089185:-:L1PA3:REF | L1PA3 | REF | full-length | ASIC2 | 0.02 |
0.74 |
0.89 |
0.66 |
0.93 |
0.76 |
0.64 |
0.82 |
0.94 |
0.62 |
0.77 |
0.69 |
chr17 | 34292450 | 34298452 | chr17:34292450-34298452:-:L1PA2:REF | L1PA2 | REF | full-length | CCL11 | 0.09 |
0.95 |
0.97 |
— | 0.34 |
0.94 |
0.9 |
0.76 |
0.58 |
0.81 |
0.72 |
0.86 |
chr17 | 34808392 | 34808394 | chr17:34808392-34808394:-:L1HS:NONREF | L1HS | KNR | — | — | — | 0.91 |
— | — | — | — | — | 0.4 |
— | — | — | — |
chr17 | 35274370 | 35278179 | chr17:35274370-35278179:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | SLFN5 | 0.02 |
0.21 |
0.78 |
0.73 |
0.74 |
0.84 |
0.11 |
0.78 |
0.72 |
0.5 |
0.78 |
0.79 |
chr17 | 35393949 | 35399945 | chr17:35393949-35399945:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.02 |
0.94 |
0.16 |
0.93 |
0.88 |
0.45 |
0.87 |
0.87 |
0.6 |
0.95 |
0.91 |
chr17 | 41200867 | 41206900 | chr17:41200867-41206900:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.53 |
0.84 |
0.6 |
0.62 |
0.85 |
0.73 |
0.84 |
0.84 |
0.57 |
0.83 |
0.88 |
chr17 | 51304948 | 51311073 | chr17:51304948-51311073:+:L1PA6:REF | L1PA6 | REF | full-length | LINC02071 | — | — | 0.96 |
— | 0.94 |
0.91 |
0.95 |
— | — | 0.71 |
0.76 |
1.0 |
chr17 | 51331252 | 51333097 | chr17:51331252-51333097:-:L1P1:REF | L1P1 | REF | 3prime-truncated | LINC02071 | 0.28 |
0.97 |
0.96 |
0.87 |
0.92 |
0.86 |
0.5 |
0.87 |
0.95 |
0.92 |
0.84 |
0.92 |
chr17 | 51446677 | 51449322 | chr17:51446677-51449322:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | LINC02073 | 0.05 |
0.25 |
0.4 |
— | — | 0.19 |
0.02 |
0.25 |
— | 0.1 |
0.17 |
0.31 |
chr17 | 52403847 | 52409865 | chr17:52403847-52409865:-:L1PA2:REF | L1PA2 | REF | full-length | LINC01982 | 0.01 |
0.58 |
— | 0.52 |
0.77 |
0.71 |
0.72 |
0.71 |
0.95 |
0.49 |
0.72 |
0.93 |
chr17 | 54316374 | 54320132 | chr17:54316374-54320132:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.0 |
0.09 |
0.11 |
0.03 |
0.91 |
0.22 |
0.0 |
0.26 |
0.83 |
0.03 |
0.21 |
0.91 |
chr17 | 54639200 | 54645354 | chr17:54639200-54645354:+:L1PA6:REF | L1PA6 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.01 |
— |
chr17 | 55105777 | 55108871 | chr17:55105777-55108871:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | STXBP4 | 0.74 |
0.95 |
0.94 |
0.87 |
0.91 |
0.91 |
0.96 |
0.94 |
0.95 |
0.96 |
0.96 |
0.97 |
chr17 | 55501716 | 55507741 | chr17:55501716-55507741:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.95 |
0.83 |
0.95 |
0.97 |
0.04 |
0.93 |
0.95 |
0.9 |
0.9 |
0.37 |
0.9 |
0.97 |
chr17 | 55938699 | 55945099 | chr17:55938699-55945099:+:L1PA8:REF | L1PA8 | REF | full-length | — | — | — | 0.43 |
— | — | — | — | — | — | — | 0.48 |
— |
chr17 | 56002401 | 56008616 | chr17:56002401-56008616:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.4 |
0.76 |
0.56 |
0.85 |
0.73 |
0.5 |
0.67 |
0.93 |
0.5 |
0.73 |
0.69 |
chr17 | 60341533 | 60343056 | chr17:60341533-60343056:-:L1P2:REF | L1P2 | REF | 3prime-truncated | USP32 | 0.95 |
0.97 |
0.99 |
0.97 |
0.92 |
0.98 |
0.98 |
0.99 |
0.94 |
0.98 |
0.99 |
0.98 |
chr17 | 60881440 | 60887474 | chr17:60881440-60887474:-:L1PA2:REF | L1PA2 | REF | full-length | BCAS3 | 0.02 |
0.27 |
0.95 |
0.42 |
0.06 |
0.77 |
0.58 |
0.9 |
0.49 |
0.01 |
0.93 |
0.65 |
chr17 | 61110229 | 61116238 | chr17:61110229-61116238:+:L1PA2:REF | L1PA2 | REF | full-length | BCAS3 | 0.36 |
0.96 |
0.98 |
0.94 |
0.88 |
0.95 |
0.95 |
0.98 |
0.97 |
0.96 |
0.98 |
0.96 |
chr17 | 62356953 | 62363149 | chr17:62356953-62363149:+:L1PA8:REF | L1PA8 | REF | full-length | EFCAB3 | 0.02 |
0.88 |
0.72 |
0.15 |
0.89 |
0.34 |
0.02 |
0.54 |
0.95 |
0.79 |
0.46 |
0.92 |
chr17 | 66596579 | 66602595 | chr17:66596579-66602595:-:L1HS:REF | L1HS | REF | full-length | PRKCA | 0.86 |
0.95 |
0.97 |
0.98 |
0.24 |
0.98 |
0.98 |
0.97 |
0.86 |
0.59 |
0.99 |
0.97 |
chr17 | 66641175 | 66641180 | chr17:66641175-66641180:+:L1HS:NONREF | L1HS | KNR | — | PRKCA | 0.99 |
0.98 |
0.98 |
— | — | — | 0.99 |
— | 0.96 |
0.97 |
— | — |