Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr18 | 31347968 | 31353996 | chr18:31347968-31353996:-:L1PA2:REF | L1PA2 | REF | full-length | DSG1 | 0.04 |
0.87 |
0.88 |
0.84 |
0.52 |
0.67 |
0.96 |
0.79 |
0.86 |
0.86 |
0.63 |
0.93 |
chr18 | 32228075 | 32233934 | chr18:32228075-32233934:-:L1PA3:REF | L1PA3 | REF | full-length | MEP1B | — | 0.87 |
0.85 |
0.9 |
0.93 |
0.77 |
0.83 |
0.9 |
0.95 |
0.83 |
0.88 |
0.93 |
chr18 | 32856626 | 32862684 | chr18:32856626-32862684:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.48 |
0.88 |
0.81 |
0.04 |
0.8 |
0.9 |
0.82 |
0.85 |
0.51 |
0.82 |
0.85 |
chr18 | 33786878 | 33793028 | chr18:33786878-33793028:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | 0.31 |
— | — | — | — | — | 0.73 |
— | — | — | — |
chr18 | 34331115 | 34337159 | chr18:34331115-34337159:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.29 |
0.95 |
0.64 |
0.07 |
0.77 |
0.58 |
0.82 |
0.84 |
0.88 |
0.83 |
0.91 |
chr18 | 34552378 | 34558395 | chr18:34552378-34558395:-:L1PA2:REF | L1PA2 | REF | full-length | DTNA | 0.01 |
0.68 |
0.97 |
0.83 |
0.68 |
0.79 |
0.96 |
0.88 |
0.96 |
0.97 |
0.87 |
0.39 |
chr18 | 34894774 | 34900928 | chr18:34894774-34900928:+:L1PA3:REF | L1PA3 | REF | full-length | DTNA | 0.03 |
0.96 |
0.95 |
0.81 |
0.88 |
0.78 |
0.98 |
0.91 |
0.97 |
0.9 |
0.92 |
0.97 |
chr18 | 35205779 | 35211809 | chr18:35205779-35211809:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.83 |
0.97 |
0.97 |
0.95 |
0.22 |
0.91 |
0.95 |
0.95 |
0.97 |
0.96 |
0.95 |
0.99 |
chr18 | 35760308 | 35766412 | chr18:35760308-35766412:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.35 |
0.14 |
0.88 |
0.4 |
0.91 |
0.88 |
0.9 |
0.86 |
0.86 |
0.87 |
0.9 |
0.95 |
chr18 | 35790620 | 35796748 | chr18:35790620-35796748:+:L1PA5:REF | L1PA5 | REF | full-length | — | — | — | — | — | — | — | 0.57 |
— | — | 0.86 |
0.72 |
— |
chr18 | 36235134 | 36241152 | chr18:36235134-36241152:-:L1PA3:REF | L1PA3 | REF | full-length | MOCOS | — | — | 0.98 |
— | 0.74 |
0.9 |
0.99 |
0.95 |
— | 0.94 |
0.95 |
0.97 |
chr18 | 37111556 | 37117653 | chr18:37111556-37117653:+:L1PA5:REF | L1PA5 | REF | full-length | KIAA1328 | — | — | — | — | — | — | — | — | — | — | 0.0 |
— |
chr18 | 37218553 | 37219963 | chr18:37218553-37219963:-:L1P2:REF | L1P2 | REF | 3prime-truncated | KIAA1328 | 0.03 |
— | — | 0.27 |
0.59 |
— | 0.67 |
— | — | 0.5 |
0.66 |
— |
chr18 | 37819737 | 37825798 | chr18:37819737-37825798:+:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.8 |
0.83 |
0.69 |
0.07 |
0.79 |
0.75 |
0.8 |
0.85 |
0.7 |
0.82 |
0.81 |
chr18 | 39565592 | 39571600 | chr18:39565592-39571600:+:L1PA2:REF | L1PA2 | REF | full-length | MIR924HG | 0.06 |
0.89 |
0.9 |
0.98 |
0.38 |
0.96 |
0.97 |
0.94 |
0.96 |
0.93 |
0.96 |
0.93 |
chr18 | 39924369 | 39930434 | chr18:39924369-39930434:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.72 |
0.84 |
0.97 |
0.04 |
0.84 |
0.8 |
0.88 |
0.85 |
0.66 |
0.88 |
0.88 |
chr18 | 40114089 | 40120205 | chr18:40114089-40120205:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.02 |
0.11 |
0.57 |
0.28 |
0.86 |
0.3 |
0.15 |
0.55 |
0.83 |
0.56 |
0.67 |
0.54 |
chr18 | 40187639 | 40193657 | chr18:40187639-40193657:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.04 |
0.77 |
0.9 |
0.85 |
0.64 |
0.85 |
0.84 |
0.92 |
0.91 |
0.86 |
0.87 |
0.91 |
chr18 | 41631742 | 41637769 | chr18:41631742-41637769:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.87 |
0.14 |
0.97 |
0.04 |
0.77 |
0.75 |
0.91 |
0.37 |
0.34 |
0.83 |
0.95 |
chr18 | 41775014 | 41781045 | chr18:41775014-41781045:+:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.82 |
0.94 |
0.92 |
0.19 |
0.86 |
0.83 |
0.9 |
0.92 |
0.72 |
0.83 |
0.87 |
chr18 | 42316969 | 42316971 | chr18:42316969-42316971:-:L1HS:NONREF | L1HS | KNR | — | LINC00907 | — | — | — | — | — | — | — | 0.83 |
— | — | — | — |
chr18 | 42660319 | 42666556 | chr18:42660319-42666556:+:L1PA4:REF | L1PA4 | REF | full-length | LINC00907 | 0.01 |
0.35 |
0.85 |
0.47 |
0.93 |
0.68 |
0.67 |
0.68 |
0.93 |
0.88 |
0.73 |
0.65 |
chr18 | 43983985 | 43990386 | chr18:43983985-43990386:+:L1PA6:REF | L1PA6 | REF | full-length | — | — | — | 0.87 |
0.1 |
0.58 |
0.78 |
0.13 |
0.5 |
1.0 |
0.54 |
0.92 |
0.36 |
chr18 | 44021279 | 44024826 | chr18:44021279-44024826:-:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.01 |
0.79 |
0.86 |
0.46 |
0.85 |
0.86 |
0.66 |
0.83 |
0.89 |
0.58 |
0.9 |
0.57 |
chr18 | 45694472 | 45700593 | chr18:45694472-45700593:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.65 |
0.93 |
0.97 |
0.95 |
0.9 |
0.96 |
0.88 |
0.96 |
0.98 |
0.91 |
0.98 |
0.97 |
chr18 | 45794070 | 45800209 | chr18:45794070-45800209:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.03 |
0.95 |
0.95 |
0.95 |
0.88 |
0.95 |
0.55 |
0.98 |
0.97 |
0.82 |
0.99 |
0.97 |
chr18 | 47637319 | 47643479 | chr18:47637319-47643479:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | 0.65 |
0.27 |
0.96 |
0.46 |
0.38 |
— | — | 0.41 |
0.51 |
0.5 |
chr18 | 47660373 | 47666427 | chr18:47660373-47666427:+:L1HS:REF | L1HS | REF | full-length | — | 0.15 |
0.96 |
0.91 |
0.61 |
0.54 |
0.79 |
0.89 |
0.86 |
0.93 |
0.76 |
0.82 |
0.88 |
chr18 | 49215768 | 49223192 | chr18:49215768-49223192:+:L1PA3:REF | L1PA3 | REF | full-length | DYM | 0.92 |
0.98 |
0.98 |
0.98 |
0.91 |
0.98 |
0.98 |
0.98 |
0.98 |
0.98 |
0.98 |
0.98 |
chr18 | 49710498 | 49716912 | chr18:49710498-49716912:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.02 |
0.98 |
0.97 |
0.69 |
0.87 |
0.83 |
0.83 |
0.87 |
0.93 |
0.92 |
0.86 |
0.98 |
chr18 | 50343959 | 50349987 | chr18:50343959-50349987:-:L1HS:REF | L1HS | REF | full-length | — | 0.69 |
0.91 |
0.93 |
0.82 |
0.08 |
0.75 |
0.88 |
0.86 |
0.94 |
0.92 |
0.87 |
0.98 |
chr18 | 50500000 | 50503218 | chr18:50500000-50503218:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | — | — | — | — | — | — | — | — | — | — | 0.03 |
— |
chr18 | 51689847 | 51689849 | chr18:51689847-51689849:-:L1HS:NONREF | L1HS | KNR | — | — | — | — | 0.72 |
— | — | — | — | — | — | 0.36 |
— | — |
chr18 | 51700979 | 51706730 | chr18:51700979-51706730:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.03 |
0.07 |
0.55 |
0.39 |
0.82 |
0.75 |
0.31 |
0.72 |
0.93 |
0.21 |
0.44 |
0.74 |
chr18 | 51740631 | 51746665 | chr18:51740631-51746665:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.83 |
0.88 |
0.82 |
0.47 |
0.84 |
0.82 |
0.93 |
0.96 |
0.66 |
0.83 |
0.95 |
chr18 | 53255214 | 53261351 | chr18:53255214-53261351:-:L1PA4:REF | L1PA4 | REF | full-length | DCC | — | — | — | — | — | 0.47 |
0.03 |
— | — | — | 0.35 |
0.05 |
chr18 | 53511450 | 53517443 | chr18:53511450-53517443:+:L1PA3:REF | L1PA3 | REF | full-length | DCC | 0.01 |
0.76 |
0.89 |
0.56 |
0.11 |
0.8 |
0.72 |
0.81 |
0.96 |
0.61 |
0.72 |
0.78 |
chr18 | 53899354 | 53899356 | chr18:53899354-53899356:-:L1HS:NONREF | L1HS | KNR | — | — | — | — | — | 0.62 |
— | — | — | — | — | — | — | — |
chr18 | 54664206 | 54670337 | chr18:54664206-54670337:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.14 |
0.92 |
0.92 |
0.79 |
0.89 |
0.86 |
0.66 |
0.9 |
0.97 |
0.71 |
0.9 |
0.92 |
chr18 | 55715484 | 55721529 | chr18:55715484-55721529:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.9 |
0.6 |
0.97 |
0.78 |
0.08 |
0.95 |
0.83 |
0.96 |
0.82 |
0.05 |
0.98 |
0.9 |
chr18 | 55887412 | 55893439 | chr18:55887412-55893439:-:L1PA3:REF | L1PA3 | REF | full-length | LINC01416 | 0.0 |
0.95 |
0.95 |
0.63 |
0.02 |
0.96 |
0.67 |
0.86 |
0.6 |
0.02 |
0.96 |
0.78 |
chr18 | 56525569 | 56531695 | chr18:56525569-56531695:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | 0.71 |
— | 0.76 |
0.78 |
0.39 |
— | — | — | 0.74 |
0.32 |
chr18 | 57259696 | 57265728 | chr18:57259696-57265728:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.0 |
0.87 |
0.73 |
0.67 |
0.89 |
0.55 |
0.63 |
0.65 |
0.91 |
0.3 |
0.6 |
0.49 |
chr18 | 57719248 | 57725264 | chr18:57719248-57725264:+:L1PA2:REF | L1PA2 | REF | full-length | ATP8B1 | 0.68 |
0.93 |
0.97 |
0.94 |
0.32 |
0.96 |
0.98 |
0.98 |
0.96 |
0.94 |
0.98 |
0.98 |
chr18 | 59256648 | 59262781 | chr18:59256648-59262781:+:L1PA4:REF | L1PA4 | REF | full-length | RAX | 0.04 |
0.86 |
0.62 |
0.56 |
0.78 |
0.68 |
0.42 |
0.59 |
0.81 |
0.43 |
0.67 |
0.63 |
chr18 | 59403939 | 59409970 | chr18:59403939-59409970:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.33 |
0.86 |
0.96 |
0.87 |
0.12 |
0.95 |
0.85 |
0.95 |
0.87 |
0.95 |
0.96 |
0.95 |
chr18 | 59771359 | 59777443 | chr18:59771359-59777443:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.0 |
0.91 |
0.91 |
0.89 |
0.73 |
0.98 |
0.74 |
0.82 |
0.86 |
0.86 |
0.88 |
0.84 |
chr18 | 60029678 | 60035707 | chr18:60029678-60035707:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.76 |
0.95 |
0.97 |
0.5 |
0.34 |
0.92 |
0.84 |
0.88 |
0.9 |
0.64 |
0.89 |
0.94 |
chr18 | 61310603 | 61316739 | chr18:61310603-61316739:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.88 |
0.86 |
0.71 |
0.94 |
0.8 |
0.73 |
0.73 |
0.9 |
0.51 |
0.78 |
0.96 |
chr18 | 61512674 | 61515526 | chr18:61512674-61515526:-:L1HS:REF | L1HS | REF | 3prime-truncated | CDH20 | — | — | — | — | — | 0.87 |
0.7 |
— | — | — | 0.92 |
0.87 |