Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr18 | 61517291 | 61517688 | chr18:61517291-61517688:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | CDH20 | 0.0 |
0.44 |
0.55 |
0.01 |
0.85 |
0.51 |
0.01 |
0.47 |
0.89 |
0.16 |
0.6 |
0.72 |
chr18 | 62906292 | 62912314 | chr18:62906292-62912314:+:L1HS:REF | L1HS | REF | full-length | PHLPP1 | 0.97 |
0.97 |
0.98 |
0.98 |
0.22 |
0.97 |
0.98 |
0.98 |
0.93 |
0.98 |
0.99 |
0.97 |
chr18 | 64226384 | 64232470 | chr18:64226384-64232470:-:L1PA4:REF | L1PA4 | REF | full-length | LINC01924 | 0.0 |
0.7 |
0.8 |
0.23 |
0.91 |
0.63 |
0.34 |
0.64 |
0.92 |
0.13 |
0.67 |
0.81 |
chr18 | 64424277 | 64430404 | chr18:64424277-64430404:+:L1PA5:REF | L1PA5 | REF | full-length | LINC01924 | 0.01 |
0.2 |
0.5 |
0.35 |
0.84 |
0.33 |
0.03 |
0.57 |
0.98 |
0.06 |
0.5 |
0.64 |
chr18 | 64572565 | 64578676 | chr18:64572565-64578676:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.39 |
0.56 |
0.22 |
0.89 |
0.53 |
0.4 |
0.58 |
0.89 |
0.4 |
0.58 |
0.66 |
chr18 | 65166414 | 65172446 | chr18:65166414-65172446:+:L1PA5:REF | L1PA5 | REF | full-length | — | — | — | 0.13 |
— | — | 0.33 |
0.21 |
— | — | 0.05 |
0.49 |
0.59 |
chr18 | 66715074 | 66721105 | chr18:66715074-66721105:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
0.04 |
0.67 |
0.66 |
0.88 |
0.61 |
0.21 |
0.56 |
0.95 |
0.27 |
0.62 |
0.88 |
chr18 | 67603633 | 67605600 | chr18:67603633-67605600:+:L1HS:REF | L1HS | REF | 3prime-truncated | LOC643542 | 0.01 |
— | 0.86 |
0.97 |
0.95 |
0.94 |
0.75 |
0.97 |
0.98 |
0.19 |
0.97 |
0.85 |
chr18 | 68784834 | 68790853 | chr18:68784834-68790853:-:L1PA2:REF | L1PA2 | REF | full-length | CCDC102B | 0.01 |
0.57 |
0.92 |
0.96 |
0.13 |
0.96 |
0.85 |
0.98 |
0.95 |
0.05 |
0.94 |
0.94 |
chr18 | 70746549 | 70752581 | chr18:70746549-70752581:-:L1HS:REF | L1HS | REF | full-length | — | 0.01 |
0.7 |
0.68 |
0.56 |
0.16 |
0.73 |
0.75 |
0.79 |
0.79 |
0.52 |
0.7 |
0.79 |
chr18 | 71092824 | 71098582 | chr18:71092824-71098582:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
0.01 |
0.33 |
0.19 |
0.77 |
0.35 |
0.03 |
0.48 |
0.48 |
0.01 |
0.49 |
0.38 |
chr18 | 72966526 | 72972556 | chr18:72966526-72972556:-:L1HS:REF | L1HS | REF | full-length | — | 0.01 |
0.87 |
0.69 |
0.39 |
0.15 |
0.79 |
0.63 |
0.84 |
0.74 |
0.51 |
0.71 |
0.55 |
chr18 | 74052958 | 74059379 | chr18:74052958-74059379:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.65 |
0.42 |
0.0 |
0.86 |
0.41 |
0.19 |
0.3 |
0.79 |
0.17 |
0.46 |
0.07 |
chr18 | 75578680 | 75578682 | chr18:75578680-75578682:-:L1HS:NONREF | L1HS | KNR | — | — | — | — | — | — | — | — | 0.79 |
— | 0.98 |
— | — | — |
chr18 | 75846851 | 75852883 | chr18:75846851-75852883:+:L1HS:REF | L1HS | REF | full-length | — | 0.03 |
0.95 |
0.92 |
0.78 |
0.25 |
0.87 |
0.9 |
0.91 |
0.83 |
0.67 |
0.82 |
0.93 |
chr18 | 77415976 | 77422002 | chr18:77415976-77422002:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.86 |
0.93 |
0.69 |
0.1 |
0.63 |
0.33 |
0.77 |
0.3 |
0.59 |
0.65 |
0.8 |
chr18 | 79284621 | 79290766 | chr18:79284621-79290766:-:L1PA3:REF | L1PA3 | REF | full-length | ATP9B | 0.74 |
0.12 |
0.98 |
0.76 |
0.93 |
0.87 |
0.93 |
0.95 |
0.98 |
0.96 |
0.98 |
0.97 |
chr19 | 146476 | 152899 | chr19:146476-152899:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.3 |
— | — | — | — | — | — | — | — | — | 0.7 |
0.79 |
chr19 | 8795844 | 8801996 | chr19:8795844-8801996:-:L1PA3:REF | L1PA3 | REF | full-length | ZNF558 | 0.3 |
0.89 |
0.67 |
0.75 |
0.89 |
0.86 |
0.6 |
0.88 |
0.87 |
0.47 |
0.85 |
0.97 |
chr19 | 9397704 | 9403756 | chr19:9397704-9403756:+:L1PA4:REF | L1PA4 | REF | full-length | ZNF266 | 0.01 |
0.86 |
0.74 |
0.54 |
0.8 |
0.65 |
0.38 |
0.75 |
0.82 |
0.33 |
0.69 |
0.66 |
chr19 | 12004811 | 12010815 | chr19:12004811-12010815:-:L1PA3:REF | L1PA3 | REF | full-length | ZNF433-AS1 | 0.4 |
0.92 |
0.89 |
0.83 |
0.88 |
0.96 |
0.91 |
1.0 |
0.98 |
0.75 |
0.94 |
0.82 |
chr19 | 20490329 | 20496601 | chr19:20490329-20496601:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.03 |
0.61 |
0.15 |
0.07 |
0.82 |
0.49 |
0.23 |
0.55 |
0.86 |
0.02 |
0.65 |
0.11 |
chr19 | 20627781 | 20633939 | chr19:20627781-20633939:-:L1PA4:REF | L1PA4 | REF | full-length | ZNF626 | 0.34 |
0.75 |
0.25 |
0.17 |
0.87 |
0.9 |
0.74 |
0.93 |
0.97 |
0.13 |
0.81 |
0.38 |
chr19 | 20807724 | 20813827 | chr19:20807724-20813827:+:L1PA3:REF | L1PA3 | REF | full-length | ZNF66 | 0.03 |
0.91 |
0.62 |
0.07 |
0.74 |
0.82 |
0.84 |
0.99 |
0.9 |
0.46 |
0.88 |
0.49 |
chr19 | 20841021 | 20847152 | chr19:20841021-20847152:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.86 |
0.74 |
0.48 |
0.88 |
0.75 |
0.72 |
0.89 |
0.87 |
0.26 |
0.81 |
0.49 |
chr19 | 21953756 | 21956965 | chr19:21953756-21956965:-:L1P2:REF | L1P2 | REF | 3prime-truncated | ZNF208 | — | — | 0.0 |
0.0 |
0.85 |
0.2 |
0.0 |
0.0 |
— | 0.08 |
0.05 |
0.0 |
chr19 | 21977275 | 21982075 | chr19:21977275-21982075:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | ZNF208 | — | — | — | — | — | — | — | — | — | — | 0.5 |
— |
chr19 | 22184056 | 22190330 | chr19:22184056-22190330:+:L1PA8:REF | L1PA8 | REF | full-length | ZNF676 | 0.0 |
0.11 |
0.02 |
0.03 |
0.81 |
0.23 |
0.02 |
0.15 |
0.36 |
0.02 |
0.18 |
0.11 |
chr19 | 22383282 | 22385064 | chr19:22383282-22385064:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | ZNF98 | 0.0 |
0.34 |
0.01 |
0.01 |
0.69 |
0.27 |
0.01 |
0.5 |
— | 0.0 |
0.46 |
0.03 |
chr19 | 22671703 | 22673468 | chr19:22671703-22673468:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | ZNF492 | — | 0.55 |
0.16 |
0.0 |
0.9 |
0.69 |
0.02 |
0.93 |
— | 0.08 |
0.73 |
0.45 |
chr19 | 23335045 | 23335952 | chr19:23335045-23335952:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.07 |
— | — | 0.82 |
— | — | — | — | — | — | — | 0.9 |
chr19 | 23430132 | 23436285 | chr19:23430132-23436285:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | 0.84 |
— | — | — | — | — | 0.72 |
— |
chr19 | 23613435 | 23619660 | chr19:23613435-23619660:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.9 |
0.34 |
0.11 |
0.88 |
0.64 |
0.29 |
0.64 |
0.81 |
0.02 |
0.62 |
0.37 |
chr19 | 23890445 | 23896455 | chr19:23890445-23896455:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.95 |
0.77 |
0.67 |
0.83 |
0.8 |
0.32 |
0.82 |
0.79 |
0.55 |
0.68 |
0.77 |
chr19 | 24013378 | 24019477 | chr19:24013378-24019477:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.78 |
0.71 |
0.61 |
0.85 |
0.72 |
0.55 |
0.7 |
0.78 |
0.36 |
0.73 |
0.59 |
chr19 | 24115697 | 24117843 | chr19:24115697-24117843:-:L1P1:REF | L1P1 | REF | 3prime-truncated | ZNF254 | 0.77 |
0.98 |
0.97 |
0.98 |
0.91 |
0.98 |
0.98 |
0.98 |
0.92 |
0.93 |
0.98 |
0.78 |
chr19 | 27600020 | 27603036 | chr19:27600020-27603036:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | — | — | — | — | — | — | 0.0 |
— | — | — | — | — |
chr19 | 28050235 | 28050565 | chr19:28050235-28050565:+:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.05 |
0.95 |
0.79 |
0.1 |
0.82 |
0.31 |
0.14 |
0.19 |
0.86 |
0.18 |
0.27 |
0.25 |
chr19 | 28087649 | 28092997 | chr19:28087649-28092997:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.01 |
0.08 |
0.75 |
0.11 |
0.84 |
0.52 |
0.15 |
0.51 |
0.88 |
0.24 |
0.49 |
0.32 |
chr19 | 28177582 | 28183612 | chr19:28177582-28183612:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.77 |
0.73 |
0.21 |
0.9 |
0.59 |
0.31 |
0.59 |
0.92 |
0.29 |
0.64 |
0.63 |
chr19 | 28269706 | 28275728 | chr19:28269706-28275728:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | 0.08 |
0.72 |
0.19 |
0.7 |
0.56 |
0.2 |
0.53 |
0.72 |
0.13 |
0.47 |
0.58 |
chr19 | 29132609 | 29138743 | chr19:29132609-29138743:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.02 |
0.78 |
0.58 |
0.38 |
0.85 |
0.54 |
0.59 |
0.65 |
0.83 |
0.36 |
0.62 |
0.66 |
chr19 | 29225779 | 29231807 | chr19:29225779-29231807:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.89 |
0.84 |
0.35 |
0.85 |
0.75 |
0.49 |
0.83 |
0.89 |
0.66 |
0.74 |
0.75 |
chr19 | 29348349 | 29354473 | chr19:29348349-29354473:+:L1PA4:REF | L1PA4 | REF | full-length | LOC284395 | 0.01 |
0.28 |
0.08 |
0.01 |
0.75 |
0.12 |
0.01 |
0.09 |
0.59 |
0.01 |
0.09 |
0.03 |
chr19 | 29459290 | 29465188 | chr19:29459290-29465188:+:L1PA2:REF | L1PA2 | REF | full-length | LOC284395 | 0.03 |
0.92 |
— | — | 0.48 |
0.85 |
0.74 |
0.84 |
0.92 |
— | 0.84 |
0.93 |
chr19 | 32587512 | 32593595 | chr19:32587512-32593595:-:L1PA3:REF | L1PA3 | REF | full-length | PDCD5 | — | — | — | — | 0.65 |
— | 0.98 |
— | — | 0.99 |
0.89 |
0.89 |
chr19 | 32846037 | 32852182 | chr19:32846037-32852182:+:L1PA4:REF | L1PA4 | REF | full-length | SLC7A9 | — | 0.37 |
0.82 |
— | 0.69 |
0.88 |
0.96 |
— | — | 0.71 |
0.81 |
0.94 |
chr19 | 34617843 | 34618159 | chr19:34617843-34618159:-:L1P1:REF | L1P1 | REF | 3prime-truncated | SCGB1B2P | 0.01 |
0.89 |
0.71 |
0.59 |
0.85 |
0.7 |
0.56 |
0.62 |
0.84 |
0.35 |
0.74 |
0.86 |
chr19 | 34696378 | 34699566 | chr19:34696378-34699566:+:L1P3:REF | L1P3 | REF | 3prime-truncated | ZNF302 | — | — | — | — | — | — | — | — | — | — | 0.01 |
— |
chr19 | 34700381 | 34706494 | chr19:34700381-34706494:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.4 |
0.37 |
0.04 |
0.78 |
0.54 |
0.39 |
0.48 |
0.72 |
0.04 |
0.55 |
0.72 |