Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr4 | 123000000 | 123004460 | chr4:123000000-123004460:-:L1P1:REF | L1P1 | REF | 3prime-truncated | SPATA5 | 0.9 |
0.91 |
0.95 |
0.94 |
0.93 |
0.96 |
0.96 |
0.94 |
0.95 |
0.2 |
0.98 |
0.98 |
chr4 | 123330661 | 123337152 | chr4:123330661-123337152:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.64 |
0.97 |
0.77 |
0.76 |
0.86 |
0.78 |
0.91 |
0.88 |
0.93 |
0.81 |
0.95 |
0.93 |
chr4 | 123721384 | 123727541 | chr4:123721384-123727541:+:L1PA3:REF | L1PA3 | REF | full-length | LINC01091 | 0.02 |
0.92 |
0.89 |
0.59 |
0.67 |
0.88 |
0.69 |
0.88 |
0.97 |
0.87 |
0.91 |
0.96 |
chr4 | 124361247 | 124367393 | chr4:124361247-124367393:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.01 |
1.0 |
0.89 |
0.96 |
0.93 |
0.93 |
0.56 |
0.79 |
1.0 |
0.94 |
0.97 |
1.0 |
chr4 | 125150267 | 125152292 | chr4:125150267-125152292:-:L1PA8:REF | L1PA8 | REF | 3prime-truncated | — | 0.0 |
1.0 |
0.6 |
0.91 |
0.93 |
0.59 |
0.02 |
0.85 |
0.89 |
0.67 |
0.9 |
0.96 |
chr4 | 126860856 | 126867000 | chr4:126860856-126867000:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.81 |
0.65 |
0.8 |
0.56 |
0.82 |
0.96 |
0.27 |
0.88 |
0.92 |
0.79 |
0.98 |
0.97 |
chr4 | 126928255 | 126934284 | chr4:126928255-126934284:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.77 |
0.77 |
0.86 |
0.51 |
0.21 |
0.96 |
0.74 |
0.96 |
0.97 |
0.9 |
0.97 |
0.98 |
chr4 | 127020568 | 127026555 | chr4:127020568-127026555:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.59 |
0.87 |
0.85 |
0.77 |
0.66 |
0.96 |
0.84 |
0.94 |
0.97 |
0.89 |
0.98 |
0.96 |
chr4 | 127062560 | 127068603 | chr4:127062560-127068603:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.43 |
0.05 |
0.82 |
0.64 |
0.7 |
0.77 |
0.52 |
0.93 |
0.81 |
0.87 |
0.81 |
0.84 |
chr4 | 127458138 | 127464617 | chr4:127458138-127464617:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.02 |
0.45 |
0.38 |
— | 0.79 |
0.62 |
0.01 |
0.72 |
0.87 |
0.58 |
0.74 |
0.95 |
chr4 | 127472690 | 127478829 | chr4:127472690-127478829:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.21 |
0.79 |
0.72 |
0.59 |
0.91 |
0.8 |
0.36 |
0.87 |
0.96 |
0.88 |
0.9 |
0.98 |
chr4 | 127588930 | 127594962 | chr4:127588930-127594962:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.08 |
0.86 |
0.94 |
0.73 |
0.68 |
0.9 |
0.51 |
0.93 |
0.96 |
0.92 |
0.95 |
0.96 |
chr4 | 127650220 | 127656245 | chr4:127650220-127656245:-:L1PA2:REF | L1PA2 | REF | full-length | INTU | 0.44 |
0.94 |
0.95 |
0.97 |
0.5 |
0.95 |
0.51 |
0.97 |
0.91 |
0.93 |
0.97 |
0.98 |
chr4 | 127676608 | 127682756 | chr4:127676608-127682756:+:L1PA3:REF | L1PA3 | REF | full-length | INTU | 0.88 |
0.96 |
0.98 |
0.99 |
0.95 |
0.98 |
0.98 |
0.98 |
0.98 |
0.98 |
0.97 |
0.98 |
chr4 | 128213789 | 128219796 | chr4:128213789-128219796:+:L1PA2:REF | L1PA2 | REF | full-length | LARP1B | 0.96 |
0.98 |
0.97 |
0.97 |
0.92 |
0.97 |
0.97 |
0.96 |
0.98 |
0.97 |
0.98 |
0.98 |
chr4 | 128895551 | 128901681 | chr4:128895551-128901681:+:L1PA4:REF | L1PA4 | REF | full-length | SCLT1 | 0.94 |
— | 0.95 |
0.97 |
0.87 |
0.97 |
0.97 |
0.97 |
0.96 |
0.94 |
0.98 |
0.97 |
chr4 | 129023547 | 129029691 | chr4:129023547-129029691:+:L1PA4:REF | L1PA4 | REF | full-length | SCLT1 | 0.97 |
0.98 |
0.97 |
0.98 |
0.92 |
0.98 |
0.98 |
0.98 |
0.97 |
0.96 |
0.98 |
0.99 |
chr4 | 129121171 | 129126976 | chr4:129121171-129126976:-:L1PA8:REF | L1PA8 | REF | 3prime-truncated | C4orf33 | — | — | — | — | — | — | — | — | — | — | 0.72 |
— |
chr4 | 129715499 | 129721626 | chr4:129715499-129721626:-:L1PA5:REF | L1PA5 | REF | full-length | LINC02466 | 0.02 |
0.87 |
0.77 |
0.87 |
0.91 |
0.82 |
0.83 |
0.83 |
0.96 |
0.95 |
0.83 |
0.97 |
chr4 | 129853905 | 129859930 | chr4:129853905-129859930:+:L1PA3:REF | L1PA3 | REF | full-length | LINC02465 | 0.02 |
0.88 |
0.63 |
0.23 |
0.1 |
0.72 |
0.36 |
0.83 |
0.94 |
0.55 |
0.77 |
0.91 |
chr4 | 130046202 | 130052342 | chr4:130046202-130052342:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.83 |
0.78 |
0.46 |
0.85 |
0.69 |
0.86 |
0.7 |
0.96 |
0.92 |
0.68 |
0.98 |
chr4 | 131260491 | 131260493 | chr4:131260491-131260493:-:L1HS:NONREF | L1HS | KNR | — | — | — | — | — | 0.91 |
0.17 |
— | — | — | — | — | — | — |
chr4 | 131352393 | 131358409 | chr4:131352393-131358409:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | — | — | 0.61 |
— | — | 0.74 |
0.78 |
— |
chr4 | 132631286 | 132637304 | chr4:132631286-132637304:-:L1PA2:REF | L1PA2 | REF | full-length | LINC01256 | 0.02 |
0.82 |
0.76 |
0.79 |
0.75 |
0.63 |
0.44 |
0.74 |
0.82 |
0.89 |
0.79 |
0.85 |
chr4 | 132944445 | 132950433 | chr4:132944445-132950433:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.0 |
0.97 |
0.82 |
0.84 |
0.85 |
0.82 |
0.82 |
0.85 |
0.96 |
0.92 |
0.84 |
0.96 |
chr4 | 133330359 | 133334605 | chr4:133330359-133334605:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.01 |
— | 0.37 |
0.36 |
0.7 |
0.25 |
0.05 |
0.35 |
— | 0.76 |
0.32 |
0.96 |
chr4 | 133733942 | 133739952 | chr4:133733942-133739952:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.18 |
0.96 |
0.87 |
0.86 |
0.9 |
0.87 |
0.77 |
0.91 |
0.98 |
0.94 |
0.89 |
0.98 |
chr4 | 134207778 | 134213927 | chr4:134207778-134213927:+:L1PA3:REF | L1PA3 | REF | full-length | PABPC4L | 0.23 |
0.96 |
0.82 |
0.85 |
0.91 |
0.93 |
0.28 |
0.86 |
0.97 |
0.96 |
0.79 |
0.98 |
chr4 | 134923018 | 134929206 | chr4:134923018-134929206:-:L1PA6:REF | L1PA6 | REF | full-length | — | 0.03 |
0.92 |
0.64 |
0.7 |
0.9 |
0.81 |
0.23 |
0.54 |
0.92 |
0.95 |
0.57 |
0.99 |
chr4 | 135178140 | 135183747 | chr4:135178140-135183747:-:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.05 |
0.8 |
0.85 |
0.89 |
0.94 |
0.83 |
0.81 |
0.93 |
0.96 |
0.96 |
0.86 |
0.98 |
chr4 | 135447537 | 135453551 | chr4:135447537-135453551:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.96 |
0.88 |
0.89 |
0.05 |
0.82 |
0.77 |
0.86 |
0.94 |
0.94 |
0.84 |
0.99 |
chr4 | 135467974 | 135474423 | chr4:135467974-135474423:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.46 |
— |
chr4 | 136293494 | 136299546 | chr4:136293494-136299546:-:L1HS:REF | L1HS | REF | full-length | — | 0.03 |
0.95 |
0.93 |
0.94 |
0.15 |
0.83 |
0.9 |
0.84 |
0.96 |
0.95 |
0.88 |
0.94 |
chr4 | 137350580 | 137357055 | chr4:137350580-137357055:+:L1PA8:REF | L1PA8 | REF | full-length | — | 0.0 |
0.35 |
0.79 |
0.3 |
0.89 |
0.89 |
0.02 |
0.92 |
0.93 |
0.84 |
0.82 |
0.95 |
chr4 | 137496278 | 137500000 | chr4:137496278-137500000:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.13 |
0.95 |
0.38 |
0.95 |
0.35 |
0.94 |
0.77 |
0.98 |
0.77 |
0.07 |
0.97 |
0.99 |
chr4 | 138480635 | 138480957 | chr4:138480635-138480957:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.52 |
0.79 |
— | 0.87 |
0.91 |
0.85 |
0.51 |
— | 0.98 |
— | 0.96 |
0.97 |
chr4 | 138881278 | 138887439 | chr4:138881278-138887439:-:L1PA3:REF | L1PA3 | REF | full-length | LOC105377448 | 0.77 |
1.0 |
0.96 |
0.96 |
0.94 |
0.94 |
0.89 |
0.95 |
0.98 |
0.98 |
0.97 |
0.99 |
chr4 | 140413342 | 140419363 | chr4:140413342-140419363:+:L1PA2:REF | L1PA2 | REF | full-length | CLGN | — | 0.91 |
— | 0.87 |
0.26 |
0.81 |
0.92 |
0.87 |
0.96 |
0.97 |
0.96 |
0.96 |
chr4 | 140782680 | 140788847 | chr4:140782680-140788847:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.01 |
0.97 |
0.82 |
0.86 |
0.88 |
0.76 |
0.72 |
0.82 |
0.95 |
0.72 |
0.82 |
0.97 |
chr4 | 141367012 | 141368858 | chr4:141367012-141368858:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.07 |
0.72 |
0.48 |
0.9 |
0.91 |
0.85 |
0.0 |
0.79 |
0.88 |
0.29 |
0.76 |
0.95 |
chr4 | 141377781 | 141383925 | chr4:141377781-141383925:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.14 |
0.88 |
0.94 |
0.91 |
0.92 |
0.94 |
0.38 |
0.97 |
0.97 |
0.76 |
0.89 |
0.96 |
chr4 | 141503846 | 141510060 | chr4:141503846-141510060:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.06 |
0.05 |
0.82 |
0.97 |
0.93 |
0.95 |
0.46 |
0.99 |
0.96 |
0.8 |
0.96 |
0.95 |
chr4 | 141549289 | 141555444 | chr4:141549289-141555444:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.05 |
0.3 |
0.64 |
0.5 |
0.57 |
0.72 |
0.47 |
0.65 |
0.67 |
0.48 |
0.77 |
0.7 |
chr4 | 141877346 | 141883376 | chr4:141877346-141883376:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.13 |
0.97 |
0.94 |
0.93 |
0.16 |
0.92 |
0.84 |
0.95 |
0.89 |
0.84 |
0.97 |
0.97 |
chr4 | 142253344 | 142259388 | chr4:142253344-142259388:+:L1PA3:REF | L1PA3 | REF | full-length | INPP4B | 0.01 |
0.95 |
0.88 |
0.97 |
0.9 |
0.94 |
0.82 |
0.95 |
0.91 |
0.83 |
0.9 |
0.9 |
chr4 | 142648199 | 142654383 | chr4:142648199-142654383:+:L1PA6:REF | L1PA6 | REF | full-length | INPP4B | — | — | — | — | — | — | — | — | — | — | 0.0 |
— |
chr4 | 142990876 | 142997042 | chr4:142990876-142997042:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.82 |
0.51 |
0.54 |
0.76 |
0.81 |
0.36 |
0.84 |
0.83 |
0.54 |
0.75 |
0.85 |
chr4 | 143100259 | 143106289 | chr4:143100259-143106289:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.04 |
0.96 |
0.88 |
0.76 |
0.28 |
0.86 |
0.7 |
0.9 |
0.94 |
0.89 |
0.91 |
0.98 |
chr4 | 143166456 | 143172590 | chr4:143166456-143172590:+:L1PA4:REF | L1PA4 | REF | full-length | LOC105377623 | — | — | — | — | — | — | — | — | — | — | 0.71 |
— |
chr4 | 143659114 | 143665240 | chr4:143659114-143665240:-:L1PA3:REF | L1PA3 | REF | full-length | FREM3 | 0.05 |
0.87 |
0.91 |
0.8 |
0.9 |
0.93 |
0.61 |
0.92 |
0.95 |
0.78 |
0.9 |
0.98 |