Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr7 | 91583270 | 91589300 | chr7:91583270-91589300:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.97 |
0.96 |
0.79 |
0.11 |
0.87 |
0.91 |
0.88 |
0.93 |
0.9 |
0.78 |
0.89 |
chr7 | 91589650 | 91595794 | chr7:91589650-91595794:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | 0.59 |
0.88 |
— | 0.85 |
0.62 |
0.33 |
0.85 |
0.96 |
0.67 |
0.79 |
0.96 |
chr7 | 91790478 | 91791370 | chr7:91790478-91791370:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.0 |
0.4 |
0.85 |
0.29 |
0.73 |
0.85 |
0.33 |
0.82 |
— | 0.54 |
0.66 |
0.98 |
chr7 | 91903682 | 91909706 | chr7:91903682-91909706:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.7 |
0.97 |
0.94 |
0.83 |
0.41 |
0.87 |
0.89 |
0.84 |
0.91 |
0.9 |
0.85 |
0.97 |
chr7 | 91986186 | 91986534 | chr7:91986186-91986534:-:L1PA8A:REF | L1PA8A | REF | 3prime-truncated | AKAP9 | — | — | 0.96 |
— | — | — | — | — | — | — | 0.99 |
— |
chr7 | 92183756 | 92189878 | chr7:92183756-92189878:-:L1PA3:REF | L1PA3 | REF | full-length | CYP51A1-AS1 | 0.98 |
0.98 |
0.98 |
0.98 |
0.94 |
0.99 |
0.97 |
0.95 |
0.97 |
0.97 |
0.98 |
0.99 |
chr7 | 93166604 | 93170864 | chr7:93166604-93170864:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.04 |
0.57 |
0.38 |
0.63 |
— | 0.33 |
0.18 |
0.56 |
— | — | 0.46 |
0.38 |
chr7 | 93341964 | 93347980 | chr7:93341964-93347980:+:L1PA3:REF | L1PA3 | REF | full-length | VPS50 | 0.89 |
0.99 |
0.99 |
— | 0.87 |
0.99 |
0.99 |
— | — | 0.98 |
0.98 |
0.98 |
chr7 | 93586902 | 93591767 | chr7:93586902-93591767:-:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.0 |
0.34 |
0.97 |
0.0 |
0.44 |
0.9 |
0.93 |
0.9 |
0.93 |
0.0 |
0.92 |
0.98 |
chr7 | 93787624 | 93793679 | chr7:93787624-93793679:-:L1HS:REF | L1HS | REF | full-length | — | 0.04 |
— | 0.89 |
— | 0.66 |
0.87 |
0.88 |
0.89 |
— | 0.97 |
0.91 |
0.98 |
chr7 | 94968695 | 94970632 | chr7:94968695-94970632:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | PPP1R9A | 0.0 |
0.91 |
0.97 |
0.99 |
0.86 |
0.99 |
0.49 |
0.82 |
0.94 |
0.93 |
0.71 |
0.97 |
chr7 | 95376777 | 95379224 | chr7:95376777-95379224:+:L1P2:REF | L1P2 | REF | 3prime-truncated | PON3 | 0.08 |
0.92 |
0.91 |
0.96 |
0.89 |
0.67 |
0.97 |
0.66 |
0.95 |
0.88 |
0.64 |
0.98 |
chr7 | 95831968 | 95837992 | chr7:95831968-95837992:-:L1PA3:REF | L1PA3 | REF | full-length | DYNC1I1 | 0.04 |
0.79 |
0.93 |
0.76 |
0.15 |
0.84 |
0.94 |
0.89 |
0.94 |
0.91 |
0.86 |
0.91 |
chr7 | 96288293 | 96294442 | chr7:96288293-96294442:+:L1PA5:REF | L1PA5 | REF | full-length | SLC25A13 | 0.98 |
0.97 |
0.97 |
0.97 |
0.94 |
0.98 |
0.97 |
0.95 |
0.99 |
0.95 |
0.98 |
0.98 |
chr7 | 96552195 | 96558214 | chr7:96552195-96558214:-:L1PA2:REF | L1PA2 | REF | full-length | SEM1 | 0.05 |
0.94 |
0.97 |
0.76 |
0.25 |
0.8 |
0.92 |
0.82 |
0.94 |
0.97 |
0.76 |
0.95 |
chr7 | 96579968 | 96585972 | chr7:96579968-96585972:-:L1PA3:REF | L1PA3 | REF | full-length | SEM1 | 0.01 |
0.38 |
0.75 |
0.43 |
0.74 |
0.52 |
0.68 |
0.71 |
0.79 |
0.72 |
0.59 |
0.66 |
chr7 | 96846650 | 96852680 | chr7:96846650-96852680:-:L1HS:REF | L1HS | REF | full-length | — | — | 0.97 |
— | — | — | — | 0.94 |
0.78 |
— | — | — | — |
chr7 | 97210061 | 97216165 | chr7:97210061-97216165:-:L1PA6:REF | L1PA6 | REF | full-length | — | 0.06 |
0.35 |
0.71 |
0.15 |
0.73 |
— | 0.23 |
0.45 |
0.81 |
0.7 |
0.55 |
0.79 |
chr7 | 97258074 | 97264217 | chr7:97258074-97264217:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.75 |
— |
chr7 | 97329746 | 97332826 | chr7:97329746-97332826:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.0 |
0.87 |
0.96 |
0.16 |
0.83 |
0.53 |
0.37 |
0.54 |
0.91 |
0.91 |
0.62 |
0.92 |
chr7 | 97532571 | 97535703 | chr7:97532571-97535703:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | — | 0.91 |
0.92 |
0.29 |
0.9 |
— | 0.66 |
— | — | 0.87 |
0.83 |
0.9 |
chr7 | 97613656 | 97619688 | chr7:97613656-97619688:+:L1HS:REF | L1HS | REF | full-length | — | 0.03 |
0.75 |
0.91 |
0.62 |
0.19 |
0.74 |
0.82 |
0.79 |
0.92 |
0.95 |
0.78 |
0.87 |
chr7 | 97777899 | 97779479 | chr7:97777899-97779479:-:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.07 |
0.88 |
0.87 |
0.67 |
0.72 |
0.72 |
0.78 |
0.72 |
0.95 |
0.93 |
0.55 |
0.88 |
chr7 | 97810373 | 97816490 | chr7:97810373-97816490:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.01 |
0.86 |
0.89 |
0.52 |
0.79 |
0.5 |
0.17 |
0.72 |
0.7 |
0.83 |
0.81 |
0.88 |
chr7 | 99654085 | 99660201 | chr7:99654085-99660201:-:L1PA4:REF | L1PA4 | REF | full-length | ZSCAN25 | 0.78 |
0.95 |
0.9 |
0.92 |
0.89 |
0.9 |
0.97 |
0.87 |
0.94 |
0.86 |
0.87 |
0.97 |
chr7 | 99686019 | 99689554 | chr7:99686019-99689554:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | CYP3A7-CYP3A51P | 0.34 |
0.21 |
0.89 |
0.78 |
0.91 |
0.8 |
0.94 |
0.78 |
0.89 |
0.77 |
0.82 |
0.94 |
chr7 | 99799759 | 99803753 | chr7:99799759-99803753:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.83 |
0.89 |
0.75 |
0.14 |
0.88 |
0.51 |
0.98 |
0.68 |
0.88 |
0.25 |
0.75 |
0.92 |
chr7 | 99809199 | 99815231 | chr7:99809199-99815231:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.95 |
0.96 |
0.91 |
0.8 |
0.12 |
0.81 |
0.99 |
0.86 |
0.91 |
0.83 |
0.87 |
0.97 |
chr7 | 102780677 | 102786841 | chr7:102780677-102786841:+:L1PA4:REF | L1PA4 | REF | full-length | FAM185A | 0.98 |
0.98 |
0.98 |
0.97 |
0.96 |
0.99 |
0.99 |
0.99 |
0.97 |
0.98 |
0.98 |
0.99 |
chr7 | 103037829 | 103043543 | chr7:103037829-103043543:+:L1P2:REF | L1P2 | REF | 3prime-truncated | FBXL13 | 0.25 |
0.79 |
0.96 |
0.97 |
0.63 |
0.81 |
0.63 |
0.7 |
0.81 |
0.89 |
0.67 |
0.84 |
chr7 | 103404195 | 103406652 | chr7:103404195-103406652:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | SLC26A5 | 0.36 |
0.88 |
0.92 |
0.45 |
0.89 |
0.49 |
0.81 |
0.49 |
0.83 |
0.78 |
0.6 |
0.93 |
chr7 | 103457779 | 103463214 | chr7:103457779-103463214:-:L1P3:REF | L1P3 | REF | 3prime-truncated | LOC101927870 | — | — | — | — | — | — | — | — | — | — | 0.5 |
— |
chr7 | 104058823 | 104061584 | chr7:104058823-104061584:+:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.62 |
0.46 |
0.78 |
0.59 |
0.67 |
0.58 |
— | 0.65 |
— | 0.48 |
0.77 |
0.72 |
chr7 | 104209736 | 104215889 | chr7:104209736-104215889:+:L1PA3:REF | L1PA3 | REF | full-length | ORC5 | 0.85 |
0.88 |
0.98 |
0.97 |
0.86 |
0.88 |
0.88 |
0.89 |
0.95 |
0.92 |
0.97 |
0.96 |
chr7 | 104276530 | 104282690 | chr7:104276530-104282690:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.29 |
0.73 |
0.46 |
0.87 |
0.64 |
0.33 |
0.71 |
0.9 |
0.23 |
0.75 |
0.71 |
chr7 | 104557650 | 104563706 | chr7:104557650-104563706:-:L1PA2:REF | L1PA2 | REF | full-length | LHFPL3 | 0.07 |
0.77 |
0.72 |
0.6 |
0.4 |
0.72 |
0.7 |
0.72 |
0.86 |
0.62 |
0.68 |
0.79 |
chr7 | 104729752 | 104735841 | chr7:104729752-104735841:-:L1PA5:REF | L1PA5 | REF | full-length | LHFPL3 | 0.02 |
0.39 |
0.6 |
0.2 |
0.73 |
0.38 |
0.3 |
0.6 |
0.87 |
0.33 |
0.45 |
0.74 |
chr7 | 104864133 | 104870254 | chr7:104864133-104870254:+:L1PA4:REF | L1PA4 | REF | full-length | LHFPL3 | 0.04 |
0.39 |
0.62 |
0.07 |
0.77 |
0.54 |
0.08 |
0.58 |
0.94 |
0.19 |
0.63 |
0.35 |
chr7 | 106208730 | 106210560 | chr7:106208730-106210560:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | — | — | — | — | — | — | — | — | — | — | 0.83 |
— |
chr7 | 106302140 | 106304954 | chr7:106302140-106304954:-:L1P3:REF | L1P3 | REF | 3prime-truncated | — | — | — | — | — | — | — | — | — | — | — | 0.0 |
— |
chr7 | 106320178 | 106321936 | chr7:106320178-106321936:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.27 |
0.72 |
0.75 |
0.78 |
0.91 |
0.79 |
0.07 |
0.72 |
0.9 |
0.11 |
0.83 |
0.95 |
chr7 | 106491298 | 106491763 | chr7:106491298-106491763:+:L1P3:REF | L1P3 | REF | 3prime-truncated | — | — | — | 0.45 |
— | — | — | — | — | — | — | 0.72 |
— |
chr7 | 106684390 | 106690518 | chr7:106684390-106690518:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.66 |
0.43 |
0.8 |
0.47 |
0.83 |
0.87 |
0.26 |
0.96 |
0.85 |
0.52 |
0.87 |
0.91 |
chr7 | 106709407 | 106715579 | chr7:106709407-106715579:+:L1PA6:REF | L1PA6 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.27 |
— |
chr7 | 106918808 | 106924960 | chr7:106918808-106924960:+:L1PA6:REF | L1PA6 | REF | full-length | PIK3CG | 0.59 |
0.95 |
0.92 |
0.04 |
0.92 |
0.85 |
0.12 |
0.93 |
0.97 |
0.93 |
0.94 |
0.99 |
chr7 | 107507907 | 107514058 | chr7:107507907-107514058:+:L1PA4:REF | L1PA4 | REF | full-length | COG5 | 0.97 |
0.96 |
0.99 |
0.98 |
0.96 |
0.99 |
0.98 |
0.95 |
0.98 |
0.96 |
0.98 |
0.99 |
chr7 | 107646332 | 107652477 | chr7:107646332-107652477:-:L1PA4:REF | L1PA4 | REF | full-length | SLC26A4-AS1 | 0.52 |
0.91 |
0.94 |
0.83 |
0.89 |
0.92 |
0.87 |
0.9 |
0.94 |
0.91 |
0.93 |
0.98 |
chr7 | 108188818 | 108188820 | chr7:108188818-108188820:+:L1HS:NONREF | L1HS | KNR | — | NRCAM | 0.85 |
0.98 |
0.97 |
0.93 |
0.26 |
0.9 |
0.86 |
— | 0.9 |
0.97 |
0.95 |
0.98 |
chr7 | 108215514 | 108218396 | chr7:108215514-108218396:-:L1P3:REF | L1P3 | REF | 3prime-truncated | NRCAM | 0.44 |
— | — | — | — | 0.81 |
0.4 |
0.55 |
— | 0.79 |
0.57 |
— |
chr7 | 108272748 | 108278897 | chr7:108272748-108278897:-:L1PA6:REF | L1PA6 | REF | full-length | NRCAM | 0.6 |
0.96 |
0.98 |
0.79 |
0.86 |
0.84 |
0.71 |
0.83 |
0.99 |
0.96 |
— | 0.98 |