Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr7 | 30439242 | 30445274 | chr7:30439242-30445274:+:L1HS:REF | L1HS | REF | full-length | NOD1 | 0.9 |
0.96 |
0.99 |
0.96 |
0.15 |
0.95 |
0.95 |
0.92 |
0.82 |
0.97 |
0.94 |
0.95 |
chr7 | 30537513 | 30543634 | chr7:30537513-30543634:+:L1PA5:REF | L1PA5 | REF | full-length | GARS-DT | 0.44 |
0.91 |
0.88 |
0.87 |
0.82 |
0.86 |
0.79 |
0.88 |
0.91 |
0.71 |
0.92 |
0.9 |
chr7 | 30636808 | 30642830 | chr7:30636808-30642830:-:L1PA2:REF | L1PA2 | REF | full-length | GARS | 0.97 |
0.96 |
0.97 |
0.98 |
0.08 |
0.92 |
0.99 |
0.87 |
0.43 |
0.97 |
0.63 |
0.98 |
chr7 | 31501202 | 31507228 | chr7:31501202-31507228:-:L1PA3:REF | L1PA3 | REF | full-length | ITPRID1 | 0.01 |
0.91 |
0.74 |
0.31 |
0.93 |
0.66 |
0.45 |
0.72 |
— | 0.39 |
0.66 |
0.65 |
chr7 | 31619616 | 31625782 | chr7:31619616-31625782:+:L1PA3:REF | L1PA3 | REF | full-length | ITPRID1 | 0.01 |
0.49 |
0.87 |
0.16 |
0.69 |
0.65 |
0.47 |
— | 0.91 |
0.51 |
0.66 |
0.61 |
chr7 | 32081883 | 32088040 | chr7:32081883-32088040:+:L1PA3:REF | L1PA3 | REF | full-length | PDE1C | 0.01 |
0.65 |
0.81 |
0.36 |
0.75 |
0.69 |
0.52 |
0.75 |
0.88 |
0.5 |
0.67 |
0.72 |
chr7 | 32307744 | 32313917 | chr7:32307744-32313917:+:L1PA4:REF | L1PA4 | REF | full-length | PDE1C | 0.01 |
0.91 |
0.79 |
0.65 |
0.87 |
0.78 |
0.68 |
0.86 |
0.86 |
0.45 |
0.78 |
0.86 |
chr7 | 32464528 | 32470565 | chr7:32464528-32470565:+:L1PA3:REF | L1PA3 | REF | full-length | LOC100130673 | 0.01 |
0.83 |
0.97 |
0.46 |
0.11 |
0.79 |
0.89 |
0.88 |
0.81 |
0.77 |
0.86 |
0.53 |
chr7 | 32682678 | 32688715 | chr7:32682678-32688715:-:L1PA2:REF | L1PA2 | REF | full-length | DPY19L1P1 | 0.98 |
0.99 |
0.98 |
0.96 |
0.62 |
0.97 |
0.98 |
0.96 |
0.96 |
0.97 |
0.98 |
0.98 |
chr7 | 32697653 | 32703545 | chr7:32697653-32703545:-:L1PA2:REF | L1PA2 | REF | full-length | DPY19L1P1 | 0.92 |
0.89 |
0.88 |
0.94 |
0.32 |
0.92 |
0.89 |
0.87 |
0.94 |
0.85 |
0.91 |
0.91 |
chr7 | 32708015 | 32714180 | chr7:32708015-32714180:+:L1PA3:REF | L1PA3 | REF | full-length | DPY19L1P1 | 0.92 |
0.99 |
0.96 |
0.98 |
0.79 |
0.94 |
0.98 |
0.99 |
0.87 |
0.94 |
0.98 |
0.99 |
chr7 | 33162386 | 33167012 | chr7:33162386-33167012:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | BBS9 | 0.03 |
0.86 |
0.93 |
0.82 |
0.98 |
0.85 |
1.0 |
0.81 |
— | 0.91 |
— | 0.92 |
chr7 | 33406378 | 33408588 | chr7:33406378-33408588:-:L1PA3:REF | L1PA3 | REF | 3prime-truncated | BBS9 | 0.0 |
0.84 |
0.92 |
0.8 |
0.92 |
0.92 |
0.76 |
0.91 |
0.98 |
0.9 |
0.93 |
0.97 |
chr7 | 33521747 | 33527773 | chr7:33521747-33527773:-:L1PA2:REF | L1PA2 | REF | full-length | BBS9 | 0.02 |
0.95 |
0.3 |
0.92 |
0.1 |
0.96 |
0.84 |
0.96 |
0.59 |
0.03 |
0.95 |
0.98 |
chr7 | 33988616 | 33994636 | chr7:33988616-33994636:-:L1PA2:REF | L1PA2 | REF | full-length | BMPER | 0.02 |
0.97 |
0.96 |
0.96 |
0.26 |
0.94 |
0.84 |
0.97 |
0.94 |
0.94 |
0.98 |
0.97 |
chr7 | 34169569 | 34175587 | chr7:34169569-34175587:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.04 |
0.02 |
0.9 |
0.01 |
0.29 |
0.95 |
0.95 |
0.97 |
0.82 |
0.01 |
0.95 |
0.49 |
chr7 | 34200242 | 34206277 | chr7:34200242-34206277:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.11 |
0.95 |
0.91 |
0.82 |
0.24 |
0.91 |
0.88 |
0.92 |
0.67 |
0.89 |
0.91 |
0.98 |
chr7 | 34431327 | 34437453 | chr7:34431327-34437453:+:L1PA6:REF | L1PA6 | REF | full-length | NPSR1-AS1 | 0.01 |
— | 0.7 |
0.56 |
0.93 |
0.88 |
0.99 |
0.71 |
— | 0.67 |
0.66 |
— |
chr7 | 34513494 | 34515633 | chr7:34513494-34515633:+:L1PA2:REF | L1PA2 | REF | 3prime-truncated | NPSR1-AS1 | 0.02 |
0.89 |
0.79 |
0.56 |
0.83 |
0.72 |
0.99 |
0.71 |
0.92 |
— | 0.67 |
0.97 |
chr7 | 34906239 | 34912252 | chr7:34906239-34912252:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.18 |
0.59 |
0.19 |
0.8 |
0.13 |
0.54 |
0.39 |
0.38 |
0.52 |
0.67 |
0.37 |
0.97 |
chr7 | 35092957 | 35098972 | chr7:35092957-35098972:+:L1PA2:REF | L1PA2 | REF | full-length | DPY19L2P1 | 0.06 |
0.97 |
0.96 |
0.8 |
0.23 |
0.83 |
0.85 |
0.85 |
0.86 |
0.94 |
0.81 |
0.98 |
chr7 | 36119955 | 36126150 | chr7:36119955-36126150:+:L1PA6:REF | L1PA6 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.19 |
— |
chr7 | 36375312 | 36379233 | chr7:36375312-36379233:-:L1P2:REF | L1P2 | REF | 3prime-truncated | KIAA0895 | 0.06 |
0.54 |
0.72 |
0.72 |
0.8 |
0.6 |
0.55 |
0.32 |
0.74 |
0.62 |
0.21 |
0.92 |
chr7 | 36552965 | 36559126 | chr7:36552965-36559126:-:L1PA3:REF | L1PA3 | REF | full-length | AOAH | 0.02 |
0.2 |
0.95 |
0.41 |
0.89 |
0.76 |
0.54 |
0.75 |
0.94 |
0.86 |
0.88 |
0.88 |
chr7 | 37120163 | 37126300 | chr7:37120163-37126300:+:L1PA5:REF | L1PA5 | REF | full-length | ELMO1 | 0.1 |
0.63 |
0.9 |
0.48 |
0.91 |
0.87 |
0.82 |
0.83 |
0.96 |
0.84 |
0.95 |
0.95 |
chr7 | 37163342 | 37169491 | chr7:37163342-37169491:-:L1PA3:REF | L1PA3 | REF | full-length | ELMO1 | 0.34 |
0.61 |
0.9 |
0.45 |
0.91 |
0.84 |
0.89 |
0.81 |
0.92 |
0.84 |
0.89 |
0.95 |
chr7 | 37612053 | 37618072 | chr7:37612053-37618072:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.17 |
0.85 |
0.92 |
0.89 |
0.03 |
0.77 |
0.72 |
0.83 |
0.78 |
0.92 |
0.74 |
0.84 |
chr7 | 39007527 | 39013552 | chr7:39007527-39013552:-:L1PA2:REF | L1PA2 | REF | full-length | POU6F2 | 0.02 |
0.9 |
0.97 |
0.81 |
0.04 |
0.88 |
0.92 |
0.86 |
0.78 |
0.82 |
0.83 |
0.94 |
chr7 | 40333760 | 40339892 | chr7:40333760-40339892:-:L1PA5:REF | L1PA5 | REF | full-length | SUGCT | 0.22 |
0.64 |
0.81 |
0.53 |
0.91 |
0.85 |
0.95 |
0.77 |
0.94 |
0.76 |
0.85 |
0.92 |
chr7 | 40948476 | 40954590 | chr7:40948476-40954590:-:L1PA7:REF | L1PA7 | REF | full-length | — | — | — | — | — | 0.88 |
— | 0.4 |
— | — | 0.69 |
0.95 |
0.85 |
chr7 | 41552203 | 41553284 | chr7:41552203-41553284:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | — | — | — | — | — | — | — | — | — | — | 0.01 |
— |
chr7 | 42580573 | 42586752 | chr7:42580573-42586752:-:L1PA4:REF | L1PA4 | REF | full-length | — | — | 0.93 |
0.95 |
0.81 |
0.87 |
— | 0.17 |
0.77 |
— | 0.85 |
0.72 |
0.43 |
chr7 | 43059096 | 43065116 | chr7:43059096-43065116:+:L1PA2:REF | L1PA2 | REF | full-length | — | — | 0.81 |
0.85 |
0.68 |
0.15 |
0.83 |
0.84 |
— | — | 0.18 |
0.91 |
0.95 |
chr7 | 43414979 | 43417052 | chr7:43414979-43417052:-:L1PA2:REF | L1PA2 | REF | 3prime-truncated | HECW1 | 0.25 |
0.88 |
0.95 |
0.9 |
0.7 |
0.94 |
0.9 |
0.89 |
0.93 |
0.96 |
0.95 |
0.97 |
chr7 | 43773137 | 43779287 | chr7:43773137-43779287:-:L1PA4:REF | L1PA4 | REF | full-length | BLVRA | 0.2 |
0.67 |
0.96 |
— | 0.93 |
0.97 |
0.77 |
0.98 |
0.95 |
0.43 |
0.97 |
0.9 |
chr7 | 45377515 | 45383528 | chr7:45377515-45383528:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | — | — | 0.9 |
— | 0.64 |
— | — | 0.72 |
0.68 |
0.87 |
chr7 | 45947419 | 45953420 | chr7:45947419-45953420:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.97 |
0.9 |
0.95 |
0.9 |
0.95 |
0.88 |
0.94 |
0.97 |
0.75 |
0.93 |
0.97 |
chr7 | 46590735 | 46596528 | chr7:46590735-46596528:+:L1P3:REF | L1P3 | REF | 3prime-truncated | — | 0.0 |
0.79 |
0.91 |
0.61 |
0.9 |
0.96 |
0.29 |
0.97 |
0.93 |
0.4 |
0.94 |
0.9 |
chr7 | 48601227 | 48607497 | chr7:48601227-48607497:-:L1PA7:REF | L1PA7 | REF | full-length | ABCA13 | 0.05 |
0.59 |
0.66 |
0.3 |
0.86 |
0.47 |
0.23 |
0.65 |
0.9 |
0.36 |
0.48 |
0.55 |
chr7 | 49649738 | 49655883 | chr7:49649738-49655883:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.22 |
0.38 |
0.16 |
0.82 |
0.35 |
0.19 |
0.35 |
0.74 |
0.26 |
0.35 |
0.4 |
chr7 | 49680245 | 49686300 | chr7:49680245-49686300:-:L1HS:REF | L1HS | REF | full-length | — | 0.18 |
0.85 |
0.94 |
0.72 |
0.14 |
0.91 |
0.85 |
0.83 |
0.93 |
0.8 |
0.85 |
0.93 |
chr7 | 50898842 | 50904874 | chr7:50898842-50904874:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.92 |
0.95 |
0.72 |
0.06 |
0.87 |
0.88 |
0.9 |
0.91 |
0.64 |
0.87 |
0.97 |
chr7 | 51533170 | 51537238 | chr7:51533170-51537238:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | — | — | — | 0.12 |
0.93 |
— | 0.04 |
0.35 |
— | 0.12 |
0.36 |
0.25 |
chr7 | 51594010 | 51600147 | chr7:51594010-51600147:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.52 |
0.82 |
0.21 |
0.88 |
0.67 |
0.14 |
0.67 |
0.95 |
0.3 |
0.63 |
0.66 |
chr7 | 51833472 | 51839489 | chr7:51833472-51839489:-:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | 0.62 |
0.2 |
0.47 |
0.6 |
0.45 |
— | — | 0.38 |
0.65 |
0.75 |
chr7 | 51889909 | 51895941 | chr7:51889909-51895941:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.85 |
0.68 |
0.33 |
0.32 |
0.65 |
0.74 |
0.65 |
0.9 |
0.43 |
0.72 |
0.68 |
chr7 | 53026321 | 53032336 | chr7:53026321-53032336:-:L1PA2:REF | L1PA2 | REF | full-length | POM121L12 | — | 0.58 |
— | 0.62 |
0.16 |
0.73 |
0.67 |
0.8 |
0.94 |
0.55 |
0.78 |
0.8 |
chr7 | 53584807 | 53584809 | chr7:53584807-53584809:-:L1HS:NONREF | L1HS | KNR | — | — | — | 0.95 |
— | — | 0.36 |
0.85 |
— | — | — | — | — | — |
chr7 | 54041299 | 54047468 | chr7:54041299-54047468:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.0 |
0.26 |
0.24 |
0.04 |
0.88 |
0.53 |
0.11 |
0.5 |
0.92 |
0.02 |
0.46 |
0.39 |
chr7 | 54319615 | 54324273 | chr7:54319615-54324273:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | LINC01445 | 0.0 |
0.54 |
0.35 |
0.02 |
0.84 |
0.53 |
0.02 |
0.45 |
0.88 |
0.05 |
0.32 |
0.06 |