Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr8 | 46608147 | 46610249 | chr8:46608147-46610249:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | ASNSP1 | 0.55 |
0.69 |
0.66 |
0.36 |
0.68 |
0.52 |
0.23 |
0.55 |
0.58 |
0.64 |
0.53 |
0.57 |
chr8 | 46691805 | 46694217 | chr8:46691805-46694217:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.0 |
0.11 |
0.03 |
0.0 |
0.59 |
0.04 |
0.02 |
0.09 |
0.38 |
0.0 |
0.03 |
0.04 |
chr8 | 46739889 | 46746029 | chr8:46739889-46746029:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.74 |
0.05 |
0.1 |
0.71 |
0.38 |
0.02 |
0.36 |
0.67 |
0.03 |
0.34 |
0.4 |
chr8 | 46752144 | 46758255 | chr8:46752144-46758255:-:L1PA4:REF | L1PA4 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.93 |
— |
chr8 | 46942165 | 46945385 | chr8:46942165-46945385:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.01 |
0.87 |
0.72 |
0.51 |
0.71 |
0.47 |
0.29 |
0.61 |
0.43 |
0.45 |
0.56 |
0.78 |
chr8 | 47018708 | 47024752 | chr8:47018708-47024752:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.93 |
0.86 |
0.39 |
0.57 |
0.58 |
0.56 |
0.57 |
0.82 |
0.45 |
0.62 |
0.89 |
chr8 | 47075514 | 47080484 | chr8:47075514-47080484:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.15 |
0.83 |
0.89 |
0.77 |
0.89 |
0.79 |
0.92 |
0.84 |
0.93 |
0.66 |
0.78 |
0.96 |
chr8 | 47095089 | 47100980 | chr8:47095089-47100980:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.18 |
0.02 |
0.85 |
0.52 |
0.86 |
0.59 |
0.32 |
0.63 |
0.84 |
0.49 |
0.66 |
0.96 |
chr8 | 47158290 | 47164269 | chr8:47158290-47164269:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | 0.91 |
0.88 |
0.82 |
0.93 |
0.55 |
0.71 |
0.71 |
0.89 |
0.75 |
0.71 |
0.92 |
chr8 | 47316969 | 47323101 | chr8:47316969-47323101:+:L1PA4:REF | L1PA4 | REF | full-length | SPIDR | 0.98 |
0.97 |
0.98 |
0.98 |
0.95 |
0.98 |
0.98 |
0.99 |
0.98 |
0.96 |
0.99 |
0.98 |
chr8 | 47484871 | 47491006 | chr8:47484871-47491006:+:L1PA5:REF | L1PA5 | REF | full-length | SPIDR | 0.96 |
0.97 |
0.98 |
0.98 |
0.95 |
0.97 |
0.98 |
0.98 |
0.99 |
0.96 |
0.98 |
0.99 |
chr8 | 47500000 | 47505742 | chr8:47500000-47505742:-:L1P1:REF | L1P1 | REF | 3prime-truncated | SPIDR | 0.93 |
0.97 |
0.97 |
0.98 |
0.94 |
0.98 |
0.98 |
0.99 |
0.97 |
0.94 |
0.98 |
0.98 |
chr8 | 47758707 | 47760586 | chr8:47758707-47760586:-:L1P3:REF | L1P3 | REF | 3prime-truncated | — | — | — | — | — | — | — | — | — | 0.0 |
— | — | — |
chr8 | 48334021 | 48340013 | chr8:48334021-48340013:-:L1PA4:REF | L1PA4 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.43 |
— |
chr8 | 48793905 | 48799930 | chr8:48793905-48799930:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.18 |
0.89 |
0.89 |
0.42 |
0.91 |
0.54 |
0.94 |
0.92 |
0.59 |
0.93 |
0.97 |
chr8 | 49447907 | 49450580 | chr8:49447907-49450580:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.02 |
0.96 |
0.57 |
0.47 |
0.88 |
0.52 |
0.4 |
0.56 |
0.92 |
0.29 |
0.6 |
0.62 |
chr8 | 49875273 | 49881266 | chr8:49875273-49881266:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.0 |
— | 0.71 |
— | — | 0.62 |
0.49 |
— | — | 0.28 |
0.7 |
— |
chr8 | 50208779 | 50210669 | chr8:50208779-50210669:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | SNTG1 | — | 0.38 |
— | — | — | — | — | — | — | — | 0.57 |
0.87 |
chr8 | 50507917 | 50514060 | chr8:50507917-50514060:-:L1PA4:REF | L1PA4 | REF | full-length | SNTG1 | 0.01 |
0.51 |
0.31 |
0.14 |
0.88 |
0.47 |
0.35 |
0.52 |
0.9 |
0.07 |
0.45 |
0.58 |
chr8 | 50687853 | 50693402 | chr8:50687853-50693402:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | SNTG1 | 0.02 |
0.17 |
0.55 |
0.11 |
0.79 |
0.79 |
0.64 |
0.7 |
0.91 |
0.38 |
0.68 |
0.61 |
chr8 | 50777704 | 50783844 | chr8:50777704-50783844:-:L1PA3:REF | L1PA3 | REF | full-length | SNTG1 | 0.01 |
0.4 |
0.64 |
0.64 |
0.72 |
0.75 |
0.64 |
0.65 |
0.62 |
0.39 |
0.75 |
0.65 |
chr8 | 52041342 | 52047484 | chr8:52041342-52047484:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
— | 0.85 |
0.61 |
— | 0.57 |
0.6 |
0.55 |
— | 0.64 |
0.72 |
0.76 |
chr8 | 52506484 | 52512618 | chr8:52506484-52512618:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
0.7 |
0.76 |
0.29 |
0.79 |
0.46 |
0.27 |
0.56 |
0.9 |
0.57 |
0.61 |
0.56 |
chr8 | 53106482 | 53112945 | chr8:53106482-53112945:-:L1PA7:REF | L1PA7 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.0 |
— |
chr8 | 53337651 | 53343813 | chr8:53337651-53343813:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.9 |
0.68 |
0.91 |
0.9 |
0.64 |
0.36 |
0.67 |
0.92 |
0.35 |
0.62 |
0.91 |
chr8 | 53780543 | 53786672 | chr8:53780543-53786672:-:L1PA4:REF | L1PA4 | REF | full-length | ATP6V1H | 0.97 |
0.22 |
0.97 |
0.96 |
0.96 |
0.98 |
0.98 |
0.97 |
0.98 |
0.97 |
0.98 |
0.99 |
chr8 | 54602020 | 54608161 | chr8:54602020-54608161:-:L1PA4:REF | L1PA4 | REF | full-length | RP1 | 0.02 |
0.39 |
0.45 |
0.1 |
0.84 |
0.51 |
0.02 |
0.58 |
0.88 |
0.07 |
0.58 |
0.24 |
chr8 | 54976590 | 54980667 | chr8:54976590-54980667:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | — | — | 0.0 |
— | — | — | — | — | — | — | 0.06 |
— |
chr8 | 55049901 | 55055999 | chr8:55049901-55055999:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.6 |
0.46 |
0.21 |
0.91 |
0.63 |
0.15 |
0.7 |
0.89 |
0.21 |
0.65 |
0.68 |
chr8 | 55460494 | 55466644 | chr8:55460494-55466644:+:L1PA4:REF | L1PA4 | REF | full-length | XKR4 | — | — | — | — | — | — | — | — | — | — | 0.62 |
— |
chr8 | 55476428 | 55482556 | chr8:55476428-55482556:+:L1PA4:REF | L1PA4 | REF | full-length | XKR4 | 0.0 |
0.65 |
0.68 |
0.17 |
0.85 |
0.56 |
0.59 |
0.6 |
0.83 |
0.31 |
0.49 |
0.58 |
chr8 | 56146152 | 56152289 | chr8:56146152-56152289:-:L1PA5:REF | L1PA5 | REF | full-length | PLAG1 | 0.01 |
0.46 |
0.88 |
0.58 |
0.81 |
0.83 |
0.76 |
0.88 |
0.86 |
0.77 |
0.63 |
0.68 |
chr8 | 56249347 | 56249349 | chr8:56249347-56249349:+:L1HS:NONREF | L1HS | KNR | — | — | — | — | 0.94 |
— | — | — | — | — | — | 0.02 |
— | — |
chr8 | 56351203 | 56357347 | chr8:56351203-56357347:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.05 |
0.72 |
0.54 |
0.76 |
0.53 |
0.03 |
0.52 |
0.71 |
0.03 |
0.62 |
0.18 |
chr8 | 56415221 | 56421252 | chr8:56415221-56421252:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.6 |
0.77 |
0.66 |
0.71 |
0.69 |
0.73 |
0.74 |
0.81 |
0.57 |
0.69 |
0.69 |
chr8 | 56937296 | 56938758 | chr8:56937296-56938758:+:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.0 |
0.03 |
0.52 |
0.0 |
0.74 |
0.26 |
0.0 |
0.46 |
— | 0.09 |
0.35 |
0.0 |
chr8 | 57158641 | 57164655 | chr8:57158641-57164655:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.04 |
0.92 |
0.95 |
0.63 |
0.87 |
0.81 |
0.81 |
0.82 |
0.94 |
0.82 |
0.84 |
0.95 |
chr8 | 57320948 | 57327013 | chr8:57320948-57327013:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.1 |
— | — | — | — | — | — | — | — | — | 0.82 |
— |
chr8 | 58096475 | 58098988 | chr8:58096475-58098988:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | FAM110B | — | — | — | — | — | — | — | — | — | — | 0.2 |
— |
chr8 | 58370157 | 58376173 | chr8:58370157-58376173:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.89 |
0.88 |
0.38 |
0.81 |
0.73 |
0.68 |
0.77 |
0.91 |
0.75 |
0.74 |
0.91 |
chr8 | 58914690 | 58920717 | chr8:58914690-58920717:+:L1PA2:REF | L1PA2 | REF | full-length | TOX | 0.16 |
0.73 |
0.97 |
0.92 |
0.16 |
0.84 |
0.84 |
0.87 |
0.5 |
0.93 |
0.87 |
0.98 |
chr8 | 59168655 | 59174679 | chr8:59168655-59174679:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.21 |
0.86 |
0.95 |
0.97 |
0.08 |
0.92 |
0.84 |
0.95 |
0.97 |
0.78 |
0.96 |
0.97 |
chr8 | 59456834 | 59462972 | chr8:59456834-59462972:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.1 |
0.42 |
0.88 |
0.0 |
0.92 |
0.88 |
0.79 |
0.83 |
0.96 |
0.54 |
0.93 |
0.98 |
chr8 | 59489149 | 59495555 | chr8:59489149-59495555:-:L1PA7:REF | L1PA7 | REF | full-length | — | 0.0 |
0.0 |
0.03 |
0.2 |
0.6 |
0.25 |
0.0 |
0.26 |
— | 0.04 |
0.54 |
— |
chr8 | 59869799 | 59875822 | chr8:59869799-59875822:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.64 |
0.8 |
0.89 |
0.71 |
0.87 |
0.53 |
0.84 |
0.96 |
0.66 |
0.87 |
0.98 |
chr8 | 59881856 | 59888008 | chr8:59881856-59888008:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.12 |
0.32 |
0.68 |
0.81 |
0.87 |
0.68 |
0.5 |
0.71 |
0.88 |
0.37 |
0.89 |
0.98 |
chr8 | 60160362 | 60166517 | chr8:60160362-60166517:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.26 |
0.74 |
0.95 |
— | 0.83 |
0.37 |
0.11 |
0.36 |
1.0 |
0.39 |
0.35 |
0.97 |
chr8 | 60447769 | 60451735 | chr8:60447769-60451735:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.05 |
0.93 |
0.75 |
0.1 |
0.9 |
0.59 |
0.37 |
0.53 |
0.91 |
0.9 |
0.51 |
0.93 |
chr8 | 61115375 | 61121394 | chr8:61115375-61121394:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.09 |
0.64 |
0.96 |
0.67 |
0.09 |
0.78 |
0.87 |
0.86 |
0.86 |
0.24 |
0.81 |
0.96 |
chr8 | 61268015 | 61274014 | chr8:61268015-61274014:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.17 |
0.82 |
0.77 |
0.7 |
0.12 |
0.84 |
0.85 |
0.85 |
0.94 |
0.55 |
0.8 |
0.94 |