Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr8 | 61481244 | 61482722 | chr8:61481244-61482722:+:L1PA5:REF | L1PA5 | REF | 3prime-truncated | CLVS1 | — | — | — | — | — | — | 0.92 |
— | — | — | 0.76 |
1.0 |
chr8 | 61844996 | 61851156 | chr8:61844996-61851156:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.12 |
0.12 |
0.79 |
0.13 |
0.81 |
0.5 |
0.21 |
0.57 |
0.92 |
0.38 |
0.54 |
0.95 |
chr8 | 61994302 | 62000000 | chr8:61994302-62000000:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | — | 0.0 |
— | — | 0.98 |
0.93 |
— | 0.34 |
0.8 |
0.99 |
0.48 |
0.56 |
0.96 |
chr8 | 62800633 | 62806816 | chr8:62800633-62806816:+:L1PA3:REF | L1PA3 | REF | full-length | NKAIN3 | 0.01 |
0.39 |
0.71 |
0.4 |
0.84 |
0.63 |
0.03 |
0.71 |
0.92 |
0.48 |
0.64 |
0.86 |
chr8 | 62975794 | 62979167 | chr8:62975794-62979167:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | NKAIN3 | 0.0 |
— | 0.26 |
— | 0.88 |
— | 0.25 |
0.36 |
0.88 |
0.12 |
0.19 |
0.27 |
chr8 | 63077186 | 63080439 | chr8:63077186-63080439:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | TTPA | — | — | — | — | — | — | — | — | — | — | 0.0 |
— |
chr8 | 63484306 | 63490336 | chr8:63484306-63490336:-:L1PA2:REF | L1PA2 | REF | full-length | LOC102724612 | 0.02 |
0.32 |
0.89 |
0.68 |
0.08 |
0.78 |
0.79 |
0.76 |
0.92 |
0.13 |
0.78 |
0.85 |
chr8 | 63504768 | 63510892 | chr8:63504768-63510892:-:L1PA6:REF | L1PA6 | REF | full-length | — | 0.0 |
0.58 |
0.59 |
0.1 |
0.85 |
0.45 |
0.37 |
0.45 |
0.87 |
0.32 |
0.46 |
0.53 |
chr8 | 63797384 | 63803439 | chr8:63797384-63803439:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.2 |
0.83 |
0.79 |
0.63 |
0.82 |
0.8 |
0.84 |
0.94 |
0.42 |
0.79 |
0.88 |
chr8 | 64083677 | 64089809 | chr8:64083677-64089809:+:L1PA6:REF | L1PA6 | REF | full-length | LINC01414 | 0.03 |
0.09 |
0.3 |
0.07 |
0.84 |
0.47 |
0.29 |
0.54 |
0.89 |
0.11 |
0.47 |
0.43 |
chr8 | 64102228 | 64108366 | chr8:64102228-64108366:+:L1PA4:REF | L1PA4 | REF | full-length | LINC01414 | 0.01 |
0.05 |
0.53 |
0.36 |
0.88 |
0.67 |
0.44 |
0.59 |
0.91 |
0.41 |
0.68 |
0.59 |
chr8 | 64240097 | 64246124 | chr8:64240097-64246124:+:L1PA3:REF | L1PA3 | REF | full-length | LINC01414 | 0.02 |
0.05 |
0.79 |
0.76 |
0.06 |
0.75 |
0.69 |
0.82 |
0.8 |
0.18 |
0.78 |
0.8 |
chr8 | 66949103 | 66955119 | chr8:66949103-66955119:-:L1PA2:REF | L1PA2 | REF | full-length | TCF24 | 0.01 |
0.02 |
0.98 |
0.5 |
0.21 |
0.9 |
0.05 |
0.92 |
0.93 |
0.28 |
0.94 |
0.98 |
chr8 | 67589906 | 67596036 | chr8:67589906-67596036:-:L1PA3:REF | L1PA3 | REF | full-length | CPA6 | 0.05 |
0.91 |
0.95 |
0.73 |
0.9 |
0.89 |
0.94 |
0.9 |
0.97 |
0.88 |
0.93 |
0.97 |
chr8 | 67893943 | 67896101 | chr8:67893943-67896101:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | — | — | 0.7 |
0.09 |
0.83 |
— | — | 0.59 |
— | — | 0.71 |
0.75 |
chr8 | 68459800 | 68465948 | chr8:68459800-68465948:+:L1PA3:REF | L1PA3 | REF | full-length | C8orf34 | — | 0.74 |
— | — | 0.78 |
0.76 |
0.22 |
0.74 |
— | — | 0.77 |
0.66 |
chr8 | 68743353 | 68749398 | chr8:68743353-68749398:+:L1PA3:REF | L1PA3 | REF | full-length | C8orf34 | — | 0.89 |
0.92 |
0.66 |
0.84 |
0.93 |
0.67 |
0.87 |
0.86 |
0.89 |
0.94 |
0.84 |
chr8 | 69019004 | 69021347 | chr8:69019004-69021347:+:L1PA3:REF | L1PA3 | REF | 3prime-truncated | LINC01592 | 0.03 |
0.97 |
0.98 |
0.69 |
0.89 |
0.94 |
0.7 |
0.98 |
0.95 |
0.93 |
0.97 |
0.83 |
chr8 | 69254219 | 69260249 | chr8:69254219-69260249:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.02 |
0.98 |
0.97 |
0.78 |
0.68 |
0.94 |
0.84 |
0.88 |
0.96 |
0.95 |
0.92 |
0.9 |
chr8 | 69351385 | 69357434 | chr8:69351385-69357434:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.1 |
0.41 |
0.48 |
0.44 |
0.18 |
0.71 |
0.3 |
0.69 |
0.66 |
0.39 |
0.73 |
0.71 |
chr8 | 69843300 | 69849423 | chr8:69843300-69849423:+:L1PA5:REF | L1PA5 | REF | full-length | SLCO5A1 | 0.0 |
0.82 |
0.97 |
0.44 |
0.9 |
0.8 |
0.39 |
0.78 |
0.96 |
0.78 |
0.7 |
0.82 |
chr8 | 70723947 | 70724828 | chr8:70723947-70724828:-:L1PA8:REF | L1PA8 | REF | 3prime-truncated | XKR9 | 0.01 |
0.93 |
0.82 |
0.04 |
0.8 |
0.42 |
0.25 |
0.48 |
0.81 |
0.81 |
0.31 |
0.34 |
chr8 | 71393303 | 71399409 | chr8:71393303-71399409:-:L1PA5:REF | L1PA5 | REF | full-length | EYA1 | — | — | — | — | — | — | — | — | — | — | 0.38 |
— |
chr8 | 71406360 | 71412376 | chr8:71406360-71412376:+:L1PA2:REF | L1PA2 | REF | full-length | EYA1 | 0.01 |
0.59 |
0.88 |
0.56 |
0.25 |
0.78 |
0.43 |
0.74 |
0.92 |
0.32 |
0.79 |
0.84 |
chr8 | 71451793 | 71457894 | chr8:71451793-71457894:+:L1PA5:REF | L1PA5 | REF | full-length | EYA1 | 0.01 |
0.34 |
0.95 |
0.11 |
0.89 |
0.78 |
0.28 |
0.66 |
0.89 |
0.86 |
0.7 |
0.65 |
chr8 | 71486984 | 71486986 | chr8:71486984-71486986:-:L1HS:NONREF | L1HS | KNR | — | EYA1 | 0.01 |
0.95 |
— | — | — | — | — | 0.89 |
0.93 |
— | — | 0.86 |
chr8 | 71581618 | 71587762 | chr8:71581618-71587762:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.0 |
— | 0.76 |
— | 0.77 |
0.38 |
0.12 |
— | — | 0.58 |
0.52 |
0.34 |
chr8 | 72147447 | 72153464 | chr8:72147447-72153464:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.59 |
0.9 |
0.96 |
0.89 |
0.26 |
0.91 |
0.88 |
0.98 |
0.81 |
0.92 |
0.98 |
0.91 |
chr8 | 72291053 | 72297285 | chr8:72291053-72297285:+:L1PA5:REF | L1PA5 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.71 |
0.78 |
chr8 | 72479440 | 72485463 | chr8:72479440-72485463:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.0 |
— | 0.93 |
— | 0.11 |
0.81 |
0.5 |
0.88 |
— | 0.01 |
0.84 |
0.86 |
chr8 | 72712682 | 72718823 | chr8:72712682-72718823:+:L1PA4:REF | L1PA4 | REF | full-length | KCNB2 | 0.04 |
0.73 |
0.87 |
0.02 |
0.67 |
0.32 |
0.03 |
0.23 |
0.76 |
0.58 |
0.17 |
0.2 |
chr8 | 72875538 | 72881588 | chr8:72875538-72881588:-:L1HS:REF | L1HS | REF | full-length | KCNB2 | 0.01 |
0.49 |
0.96 |
— | — | — | — | — | — | 0.95 |
0.79 |
0.97 |
chr8 | 73055509 | 73056094 | chr8:73055509-73056094:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | TERF1 | 0.95 |
0.9 |
0.96 |
0.98 |
0.93 |
0.98 |
0.99 |
0.99 |
0.99 |
0.98 |
0.97 |
0.98 |
chr8 | 73234866 | 73241084 | chr8:73234866-73241084:-:L1PA6:REF | L1PA6 | REF | full-length | C8orf89 | 0.19 |
0.43 |
0.95 |
0.46 |
0.45 |
0.71 |
0.23 |
0.79 |
0.89 |
0.89 |
0.73 |
0.85 |
chr8 | 74015888 | 74022085 | chr8:74015888-74022085:+:L1PA6:REF | L1PA6 | REF | full-length | LY96 | 0.02 |
0.99 |
0.6 |
0.27 |
0.91 |
0.91 |
0.63 |
0.89 |
0.86 |
0.87 |
0.78 |
0.96 |
chr8 | 74156205 | 74162644 | chr8:74156205-74162644:+:L1PA7:REF | L1PA7 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.97 |
— |
chr8 | 74396360 | 74402706 | chr8:74396360-74402706:-:L1PA3:REF | L1PA3 | REF | full-length | GDAP1 | 0.03 |
0.9 |
0.97 |
0.44 |
0.89 |
0.85 |
0.78 |
0.86 |
0.91 |
0.96 |
0.72 |
0.98 |
chr8 | 74594235 | 74600252 | chr8:74594235-74600252:-:L1PA3:REF | L1PA3 | REF | full-length | MIR2052HG | — | 0.96 |
0.9 |
0.6 |
0.08 |
0.95 |
0.69 |
0.89 |
0.95 |
0.06 |
0.81 |
0.98 |
chr8 | 74866519 | 74872545 | chr8:74866519-74872545:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.93 |
0.83 |
0.82 |
0.04 |
0.84 |
0.79 |
0.88 |
0.9 |
0.85 |
0.89 |
0.92 |
chr8 | 74942646 | 74948678 | chr8:74942646-74948678:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.89 |
0.91 |
0.65 |
0.11 |
0.83 |
0.83 |
0.84 |
0.92 |
0.01 |
0.82 |
0.99 |
chr8 | 75202314 | 75208798 | chr8:75202314-75208798:-:L1PA8:REF | L1PA8 | REF | full-length | — | — | — | 0.35 |
— | 0.82 |
0.3 |
0.0 |
— | — | — | 0.26 |
0.86 |
chr8 | 75278367 | 75284402 | chr8:75278367-75284402:+:L1PA4:REF | L1PA4 | REF | full-length | CASC9 | 0.07 |
0.92 |
0.9 |
0.79 |
0.05 |
0.79 |
0.87 |
0.85 |
0.94 |
0.48 |
0.83 |
0.98 |
chr8 | 75324221 | 75330225 | chr8:75324221-75330225:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.03 |
0.57 |
0.92 |
0.71 |
0.05 |
0.77 |
0.46 |
0.8 |
0.35 |
0.01 |
0.79 |
0.57 |
chr8 | 75356296 | 75359980 | chr8:75356296-75359980:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.02 |
0.77 |
0.79 |
0.18 |
0.27 |
0.55 |
0.68 |
0.51 |
0.94 |
0.86 |
0.46 |
0.85 |
chr8 | 75621331 | 75627355 | chr8:75621331-75627355:-:L1HS:REF | L1HS | REF | full-length | — | 0.01 |
0.83 |
0.84 |
0.62 |
0.86 |
0.83 |
0.6 |
0.88 |
0.97 |
0.83 |
0.86 |
0.98 |
chr8 | 75637977 | 75638256 | chr8:75637977-75638256:-:L1PA5:REF | L1PA5 | REF | 3prime-truncated | — | 0.0 |
0.11 |
0.35 |
0.12 |
0.78 |
0.41 |
0.02 |
0.5 |
0.84 |
0.3 |
0.42 |
0.99 |
chr8 | 75872202 | 75876456 | chr8:75872202-75876456:-:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.0 |
0.36 |
0.56 |
0.06 |
0.84 |
0.5 |
0.04 |
0.82 |
0.93 |
0.66 |
0.58 |
0.97 |
chr8 | 76308116 | 76314119 | chr8:76308116-76314119:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.25 |
0.82 |
0.26 |
0.06 |
0.65 |
0.9 |
0.88 |
0.9 |
0.11 |
0.73 |
0.98 |
chr8 | 76896098 | 76902231 | chr8:76896098-76902231:-:L1PA6:REF | L1PA6 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.85 |
— |
chr8 | 77088411 | 77094444 | chr8:77088411-77094444:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.81 |
0.95 |
0.68 |
0.16 |
0.89 |
0.77 |
0.9 |
0.94 |
0.96 |
0.86 |
0.98 |