Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr8 | 9838369 | 9844793 | chr8:9838369-9844793:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.02 |
— | 0.7 |
0.16 |
0.81 |
0.56 |
0.4 |
— | 0.88 |
0.51 |
0.51 |
0.91 |
chr8 | 10932425 | 10938427 | chr8:10932425-10938427:-:L1PA2:REF | L1PA2 | REF | full-length | XKR6 | 0.1 |
0.96 |
0.97 |
0.75 |
0.27 |
0.75 |
0.81 |
— | 0.76 |
0.94 |
0.8 |
0.95 |
chr8 | 11814868 | 11821002 | chr8:11814868-11821002:-:L1PA6:REF | L1PA6 | REF | full-length | FDFT1 | 0.92 |
0.82 |
0.95 |
0.96 |
0.96 |
0.98 |
0.94 |
0.95 |
0.96 |
0.96 |
0.95 |
0.97 |
chr8 | 14361212 | 14362828 | chr8:14361212-14362828:-:L1P2:REF | L1P2 | REF | 3prime-truncated | SGCZ | — | — | — | — | — | — | 0.08 |
— | — | — | 0.32 |
— |
chr8 | 14803216 | 14809243 | chr8:14803216-14809243:+:L1PA3:REF | L1PA3 | REF | full-length | SGCZ | 0.08 |
0.37 |
0.83 |
0.78 |
0.36 |
0.8 |
0.58 |
0.87 |
0.9 |
0.6 |
0.82 |
0.82 |
chr8 | 15555981 | 15562028 | chr8:15555981-15562028:-:L1PA2:REF | L1PA2 | REF | full-length | TUSC3 | 0.51 |
0.09 |
0.95 |
0.95 |
0.3 |
0.97 |
0.67 |
0.99 |
0.89 |
0.01 |
0.98 |
0.65 |
chr8 | 15576322 | 15582323 | chr8:15576322-15582323:-:L1PA2:REF | L1PA2 | REF | full-length | TUSC3 | 0.01 |
1.0 |
0.98 |
— | 0.34 |
0.99 |
0.74 |
0.99 |
0.91 |
0.15 |
0.99 |
0.82 |
chr8 | 16032507 | 16035341 | chr8:16032507-16035341:+:L1PA4:REF | L1PA4 | REF | 3prime-truncated | — | 0.01 |
0.53 |
0.03 |
0.5 |
0.82 |
0.48 |
0.25 |
0.77 |
0.9 |
0.02 |
0.69 |
0.44 |
chr8 | 16204147 | 16207566 | chr8:16204147-16207566:+:L1P1:REF | L1P1 | REF | 3prime-truncated | — | 0.0 |
0.19 |
0.42 |
0.69 |
0.95 |
0.72 |
0.1 |
0.92 |
— | 0.12 |
0.83 |
0.53 |
chr8 | 16651004 | 16651965 | chr8:16651004-16651965:-:L1P1:REF | L1P1 | REF | 3prime-truncated | — | — | — | — | 0.92 |
0.88 |
0.74 |
0.56 |
— | — | — | 0.96 |
0.85 |
chr8 | 16670119 | 16674066 | chr8:16670119-16674066:+:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.02 |
0.9 |
0.91 |
0.98 |
0.19 |
0.91 |
0.91 |
0.91 |
0.95 |
0.58 |
0.98 |
0.95 |
chr8 | 16878304 | 16879397 | chr8:16878304-16879397:+:L1P2:REF | L1P2 | REF | 3prime-truncated | — | — | — | — | — | — | — | 0.57 |
0.92 |
— | 0.73 |
0.95 |
— |
chr8 | 16943968 | 16949995 | chr8:16943968-16949995:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.75 |
0.94 |
0.71 |
0.3 |
0.8 |
0.9 |
0.91 |
0.57 |
0.75 |
0.95 |
0.97 |
chr8 | 17291308 | 17294896 | chr8:17291308-17294896:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | VPS37A | 0.94 |
0.97 |
0.46 |
0.97 |
0.9 |
0.71 |
0.97 |
0.92 |
0.94 |
0.66 |
0.85 |
0.98 |
chr8 | 19910039 | 19916128 | chr8:19910039-19916128:-:L1PA5:REF | L1PA5 | REF | full-length | — | 0.13 |
— | — | 0.08 |
— | 0.33 |
0.05 |
0.34 |
— | 0.44 |
0.33 |
0.31 |
chr8 | 19930161 | 19936300 | chr8:19930161-19936300:+:L1PA4:REF | L1PA4 | REF | full-length | LPL | 0.79 |
0.84 |
0.94 |
0.9 |
0.91 |
0.87 |
0.76 |
0.92 |
0.96 |
0.94 |
0.9 |
0.92 |
chr8 | 20742703 | 20748777 | chr8:20742703-20748777:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.01 |
0.06 |
0.91 |
0.21 |
0.89 |
0.62 |
0.33 |
0.67 |
0.78 |
0.13 |
0.65 |
0.5 |
chr8 | 21825719 | 21831739 | chr8:21825719-21831739:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.79 |
0.89 |
0.52 |
0.81 |
0.72 |
0.81 |
0.8 |
0.92 |
0.76 |
0.76 |
0.88 |
chr8 | 23645193 | 23651219 | chr8:23645193-23651219:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.08 |
0.92 |
0.97 |
0.89 |
0.29 |
0.89 |
0.86 |
0.91 |
0.89 |
0.77 |
0.9 |
0.9 |
chr8 | 24448685 | 24454809 | chr8:24448685-24454809:-:L1PA3:REF | L1PA3 | REF | full-length | LOC101929294 | 0.01 |
0.82 |
0.88 |
0.81 |
0.88 |
0.8 |
0.75 |
0.83 |
0.92 |
0.71 |
0.82 |
0.74 |
chr8 | 24839573 | 24845719 | chr8:24839573-24845719:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.34 |
0.86 |
0.63 |
— | 0.52 |
0.14 |
0.55 |
0.87 |
0.51 |
0.63 |
0.47 |
chr8 | 25654942 | 25660944 | chr8:25654942-25660944:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.14 |
— | 0.86 |
0.37 |
0.57 |
— | 0.73 |
— | — | 0.58 |
0.63 |
0.97 |
chr8 | 25730343 | 25736354 | chr8:25730343-25736354:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.11 |
0.02 |
0.97 |
0.79 |
0.17 |
0.89 |
0.93 |
0.78 |
0.89 |
0.83 |
0.86 |
0.9 |
chr8 | 26395612 | 26401579 | chr8:26395612-26401579:+:L1PA2:REF | L1PA2 | REF | full-length | BNIP3L | 0.97 |
0.94 |
0.92 |
0.96 |
0.16 |
0.98 |
0.95 |
0.98 |
0.85 |
0.94 |
0.98 |
0.99 |
chr8 | 27057852 | 27063983 | chr8:27057852-27063983:-:L1PA5:REF | L1PA5 | REF | full-length | MIR548H4 | 0.02 |
0.14 |
0.75 |
0.14 |
0.71 |
0.7 |
0.68 |
0.56 |
0.83 |
0.24 |
0.51 |
0.63 |
chr8 | 27113618 | 27119645 | chr8:27113618-27119645:+:L1HS:REF | L1HS | REF | full-length | — | 0.02 |
0.58 |
0.78 |
0.72 |
0.8 |
0.76 |
0.82 |
0.78 |
0.85 |
0.49 |
0.73 |
0.77 |
chr8 | 27549392 | 27555435 | chr8:27549392-27555435:-:L1PA3:REF | L1PA3 | REF | full-length | EPHX2 | 0.71 |
0.71 |
0.85 |
0.8 |
0.82 |
0.77 |
0.92 |
0.78 |
0.85 |
0.84 |
0.75 |
0.87 |
chr8 | 31231264 | 31237418 | chr8:31231264-31237418:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.24 |
0.83 |
0.96 |
0.59 |
0.86 |
0.86 |
0.18 |
0.83 |
0.97 |
0.87 |
0.82 |
0.93 |
chr8 | 31566107 | 31571502 | chr8:31566107-31571502:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.01 |
0.1 |
0.48 |
0.05 |
0.78 |
0.36 |
0.12 |
0.35 |
0.9 |
0.0 |
0.4 |
0.16 |
chr8 | 31851611 | 31857633 | chr8:31851611-31857633:-:L1PA3:REF | L1PA3 | REF | full-length | NRG1 | — | — | — | — | 0.95 |
— | 0.62 |
— | — | — | 0.93 |
0.83 |
chr8 | 34438302 | 34443846 | chr8:34438302-34443846:+:L1P2:REF | L1P2 | REF | 3prime-truncated | — | — | — | — | — | — | — | — | — | — | — | 0.47 |
— |
chr8 | 34535404 | 34540356 | chr8:34535404-34540356:+:L1P2:REF | L1P2 | REF | 3prime-truncated | — | 0.0 |
0.2 |
0.93 |
0.49 |
0.89 |
0.7 |
0.45 |
0.76 |
1.0 |
0.33 |
0.76 |
0.88 |
chr8 | 35171472 | 35177508 | chr8:35171472-35177508:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.04 |
0.51 |
0.78 |
0.73 |
0.82 |
0.79 |
0.75 |
0.78 |
0.96 |
0.58 |
0.77 |
0.79 |
chr8 | 35528045 | 35534071 | chr8:35528045-35534071:-:L1PA2:REF | L1PA2 | REF | full-length | UNC5D | 0.03 |
0.76 |
0.94 |
0.64 |
0.69 |
0.84 |
0.83 |
0.84 |
0.95 |
0.65 |
0.82 |
0.85 |
chr8 | 36195257 | 36201393 | chr8:36195257-36201393:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.64 |
0.56 |
0.41 |
0.89 |
0.64 |
0.25 |
— | 0.93 |
0.39 |
0.63 |
0.67 |
chr8 | 36388573 | 36394608 | chr8:36388573-36394608:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.65 |
0.62 |
0.58 |
0.15 |
0.74 |
0.58 |
0.76 |
0.94 |
0.35 |
0.75 |
0.81 |
chr8 | 36725762 | 36731905 | chr8:36725762-36731905:+:L1PA6:REF | L1PA6 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.0 |
— |
chr8 | 37460279 | 37466395 | chr8:37460279-37466395:+:L1PA3:REF | L1PA3 | REF | full-length | LINC01605 | 0.0 |
— | 0.96 |
— | 0.91 |
0.92 |
0.73 |
0.93 |
— | 0.95 |
0.97 |
0.89 |
chr8 | 40016397 | 40022547 | chr8:40016397-40022547:-:L1PA5:REF | L1PA5 | REF | full-length | IDO2 | 0.01 |
0.87 |
0.86 |
0.77 |
0.87 |
0.73 |
0.47 |
0.74 |
0.84 |
0.38 |
0.72 |
0.63 |
chr8 | 40138223 | 40144344 | chr8:40138223-40144344:-:L1PA4:REF | L1PA4 | REF | full-length | TCIM | 0.01 |
0.82 |
0.85 |
0.83 |
0.85 |
0.93 |
0.96 |
0.89 |
0.91 |
0.33 |
0.88 |
0.42 |
chr8 | 40432212 | 40438240 | chr8:40432212-40438240:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.08 |
0.97 |
0.97 |
0.94 |
0.22 |
0.93 |
0.92 |
0.94 |
0.94 |
0.73 |
0.95 |
0.91 |
chr8 | 40575655 | 40575657 | chr8:40575655-40575657:-:L1HS:NONREF | L1HS | KNR | — | ZMAT4 | — | — | — | — | — | — | — | 0.99 |
— | — | — | — |
chr8 | 40647061 | 40653096 | chr8:40647061-40653096:+:L1PA2:REF | L1PA2 | REF | full-length | ZMAT4 | 0.2 |
0.93 |
0.9 |
0.81 |
0.42 |
0.9 |
0.7 |
0.94 |
0.92 |
0.51 |
0.9 |
0.76 |
chr8 | 43110936 | 43113064 | chr8:43110936-43113064:+:L1P1:REF | L1P1 | REF | 3prime-truncated | POMK | 0.94 |
0.97 |
0.99 |
0.87 |
0.92 |
0.96 |
0.95 |
0.94 |
0.95 |
0.96 |
0.98 |
0.96 |
chr8 | 43113063 | 43114759 | chr8:43113063-43114759:-:L1P1:REF | L1P1 | REF | 3prime-truncated | POMK | 0.97 |
1.0 |
0.98 |
0.99 |
0.97 |
1.0 |
0.97 |
0.99 |
0.99 |
0.98 |
0.99 |
0.99 |
chr8 | 43260607 | 43266588 | chr8:43260607-43266588:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.02 |
0.82 |
0.65 |
0.43 |
0.68 |
0.58 |
0.55 |
0.51 |
0.83 |
0.4 |
0.54 |
0.83 |
chr8 | 43307287 | 43313276 | chr8:43307287-43313276:-:L1PA2:REF | L1PA2 | REF | full-length | POTEA | 0.01 |
0.96 |
0.85 |
0.28 |
0.91 |
0.6 |
0.24 |
0.66 |
0.81 |
— | 0.64 |
0.97 |
chr8 | 43320522 | 43326578 | chr8:43320522-43326578:-:L1PA3:REF | L1PA3 | REF | full-length | POTEA | — | — | — | — | 0.18 |
0.61 |
— | — | — | — | 0.6 |
— |
chr8 | 43391074 | 43397080 | chr8:43391074-43397080:-:L1PA2:REF | L1PA2 | REF | full-length | — | — | — | 0.53 |
0.09 |
0.86 |
— | 0.38 |
— | 0.75 |
0.03 |
0.45 |
— |
chr8 | 43480071 | 43486196 | chr8:43480071-43486196:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.04 |
0.77 |
0.07 |
0.05 |
0.59 |
0.28 |
0.19 |
0.39 |
0.63 |
0.05 |
0.2 |
0.89 |