Chr | Start | End | Name | Family | Ref | Integrity | Closest gene | K562 | MCF7 | HEK293 | HeLaS3 | 2102Ep | BJ | HepG2 | IMR90 | H1 | HEK293T | MRC5 | HCT116 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chrX | 67424052 | 67427821 | chrX:67424052-67427821:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.02 |
0.83 |
0.01 |
0.02 |
0.84 |
0.22 |
0.01 |
0.1 |
0.77 |
0.03 |
0.14 |
0.66 |
chrX | 67488333 | 67494506 | chrX:67488333-67494506:+:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.77 |
0.53 |
0.05 |
0.84 |
0.71 |
0.4 |
0.61 |
0.85 |
0.05 |
0.4 |
0.9 |
chrX | 67626635 | 67632661 | chrX:67626635-67632661:-:L1PA3:REF | L1PA3 | REF | full-length | AR | 0.01 |
0.84 |
0.65 |
0.67 |
0.91 |
0.98 |
0.73 |
0.71 |
0.96 |
0.54 |
0.79 |
0.98 |
chrX | 67883964 | 67890092 | chrX:67883964-67890092:-:L1PA5:REF | L1PA5 | REF | full-length | — | — | — | — | — | — | — | — | — | — | — | 0.0 |
— |
chrX | 68216915 | 68222939 | chrX:68216915-68222939:+:L1PA2:REF | L1PA2 | REF | full-length | OPHN1 | 0.67 |
0.96 |
0.9 |
0.96 |
0.13 |
0.94 |
0.95 |
0.9 |
0.97 |
0.96 |
0.97 |
0.95 |
chrX | 68264543 | 68270753 | chrX:68264543-68270753:+:L1PA5:REF | L1PA5 | REF | full-length | OPHN1 | 0.32 |
0.67 |
0.56 |
0.95 |
0.66 |
0.94 |
0.58 |
0.78 |
0.94 |
0.77 |
0.82 |
0.96 |
chrX | 68736250 | 68742398 | chrX:68736250-68742398:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.13 |
0.87 |
0.75 |
0.52 |
0.8 |
0.82 |
0.04 |
0.69 |
0.9 |
0.75 |
0.84 |
0.91 |
chrX | 69245610 | 69247598 | chrX:69245610-69247598:+:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.01 |
0.68 |
0.73 |
0.06 |
0.93 |
0.6 |
0.02 |
0.65 |
0.92 |
0.62 |
0.39 |
0.71 |
chrX | 69350757 | 69356897 | chrX:69350757-69356897:+:L1PA5:REF | L1PA5 | REF | full-length | — | 0.03 |
0.7 |
0.4 |
0.16 |
0.86 |
0.57 |
0.69 |
0.62 |
0.92 |
0.28 |
0.58 |
0.86 |
chrX | 69448371 | 69454392 | chrX:69448371-69454392:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.03 |
0.52 |
0.62 |
0.13 |
0.73 |
0.46 |
0.43 |
0.51 |
0.91 |
0.34 |
0.48 |
0.81 |
chrX | 69676829 | 69682848 | chrX:69676829-69682848:-:L1PA3:REF | L1PA3 | REF | full-length | EDA | — | — | 0.7 |
— | — | — | — | — | — | 0.61 |
0.67 |
— |
chrX | 69783286 | 69789318 | chrX:69783286-69789318:-:L1PA3:REF | L1PA3 | REF | full-length | EDA | 0.02 |
0.33 |
0.67 |
0.45 |
0.24 |
0.71 |
0.68 |
0.7 |
0.95 |
0.56 |
0.47 |
0.97 |
chrX | 69822696 | 69828728 | chrX:69822696-69828728:-:L1PA3:REF | L1PA3 | REF | full-length | EDA | 0.18 |
0.92 |
0.82 |
0.76 |
0.8 |
0.69 |
0.98 |
0.92 |
0.96 |
0.8 |
0.71 |
0.98 |
chrX | 70660890 | 70662695 | chrX:70660890-70662695:+:L1P1:REF | L1P1 | REF | 3prime-truncated | TEX11 | — | — | 0.55 |
— | — | — | — | — | — | 0.32 |
— | — |
chrX | 70710795 | 70716928 | chrX:70710795-70716928:-:L1PA4:REF | L1PA4 | REF | full-length | TEX11 | — | — | 0.49 |
— | — | — | 0.28 |
0.39 |
— | 0.23 |
0.34 |
0.43 |
chrX | 70937958 | 70944111 | chrX:70937958-70944111:-:L1PA3:REF | L1PA3 | REF | full-length | SLC7A3 | 0.08 |
0.71 |
0.69 |
0.56 |
0.75 |
0.82 |
0.79 |
0.67 |
0.78 |
0.6 |
0.77 |
0.96 |
chrX | 71837932 | 71844064 | chrX:71837932-71844064:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.0 |
0.58 |
0.25 |
0.09 |
0.7 |
0.26 |
0.04 |
0.12 |
0.77 |
0.03 |
0.32 |
0.83 |
chrX | 71897087 | 71903211 | chrX:71897087-71903211:-:L1PA4:REF | L1PA4 | REF | full-length | NHSL2 | 0.11 |
0.45 |
0.83 |
0.31 |
0.7 |
0.85 |
0.36 |
0.77 |
0.98 |
0.65 |
0.81 |
0.94 |
chrX | 72440593 | 72446687 | chrX:72440593-72446687:+:L1PA3:REF | L1PA3 | REF | full-length | HDAC8 | — | 0.95 |
0.92 |
1.0 |
0.95 |
0.99 |
0.95 |
0.85 |
0.98 |
0.92 |
0.99 |
1.0 |
chrX | 72585447 | 72591573 | chrX:72585447-72591573:+:L1PA6:REF | L1PA6 | REF | full-length | PHKA1 | 0.5 |
0.72 |
0.24 |
1.0 |
0.9 |
0.6 |
0.96 |
0.43 |
— | 0.25 |
0.84 |
1.0 |
chrX | 72980711 | 72986876 | chrX:72980711-72986876:+:L1PA6:REF | L1PA6 | REF | full-length | — | 0.01 |
0.69 |
0.71 |
0.35 |
0.87 |
0.59 |
0.01 |
0.73 |
0.83 |
0.1 |
0.44 |
0.89 |
chrX | 73059663 | 73065814 | chrX:73059663-73065814:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.39 |
0.36 |
0.08 |
0.78 |
0.35 |
0.42 |
0.36 |
0.8 |
0.06 |
0.36 |
0.38 |
chrX | 73106142 | 73112170 | chrX:73106142-73112170:+:L1HS:REF | L1HS | REF | full-length | — | 0.04 |
0.83 |
0.66 |
0.65 |
0.11 |
0.73 |
0.87 |
0.76 |
0.88 |
0.58 |
0.85 |
0.87 |
chrX | 73184900 | 73190725 | chrX:73184900-73190725:+:L1PA7:REF | L1PA7 | REF | full-length | — | 0.02 |
0.76 |
0.49 |
0.3 |
0.86 |
0.62 |
0.3 |
0.72 |
0.92 |
0.26 |
0.64 |
0.72 |
chrX | 73229846 | 73231543 | chrX:73229846-73231543:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.02 |
0.36 |
0.02 |
0.03 |
0.55 |
0.07 |
0.01 |
0.06 |
0.56 |
0.01 |
0.07 |
0.03 |
chrX | 73380991 | 73387013 | chrX:73380991-73387013:+:L1HS:REF | L1HS | REF | full-length | — | 0.19 |
0.87 |
0.76 |
0.76 |
0.26 |
0.82 |
0.77 |
0.78 |
0.94 |
0.57 |
0.84 |
— |
chrX | 73498172 | 73498574 | chrX:73498172-73498574:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | 0.0 |
0.48 |
0.01 |
0.0 |
0.73 |
0.18 |
0.0 |
0.08 |
0.8 |
0.02 |
0.04 |
0.05 |
chrX | 73643004 | 73645115 | chrX:73643004-73645115:-:L1P1:REF | L1P1 | REF | 3prime-truncated | CHIC1 | 0.29 |
0.93 |
0.88 |
0.97 |
0.94 |
0.98 |
0.57 |
0.96 |
0.95 |
0.87 |
0.98 |
0.95 |
chrX | 73767929 | 73768939 | chrX:73767929-73768939:+:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.01 |
0.51 |
0.54 |
0.14 |
0.89 |
0.2 |
0.37 |
0.38 |
0.92 |
0.21 |
0.41 |
0.43 |
chrX | 74033943 | 74040075 | chrX:74033943-74040075:-:L1PA5:REF | L1PA5 | REF | full-length | JPX | 0.04 |
0.94 |
0.71 |
0.74 |
0.91 |
0.93 |
0.93 |
0.85 |
0.96 |
0.47 |
0.92 |
0.97 |
chrX | 74099380 | 74101196 | chrX:74099380-74101196:-:L1PA4:REF | L1PA4 | REF | 3prime-truncated | FTX | 0.08 |
0.93 |
0.62 |
0.91 |
0.88 |
0.97 |
0.96 |
0.88 |
0.96 |
0.67 |
0.97 |
0.98 |
chrX | 74474478 | 74480631 | chrX:74474478-74480631:-:L1PA4:REF | L1PA4 | REF | full-length | SLC16A2 | 0.02 |
0.79 |
0.81 |
0.03 |
0.89 |
0.99 |
0.8 |
0.89 |
0.92 |
0.54 |
0.97 |
0.99 |
chrX | 74788952 | 74795000 | chrX:74788952-74795000:-:L1PA2:REF | L1PA2 | REF | full-length | NEXMIF | 0.18 |
0.83 |
0.58 |
0.49 |
0.74 |
0.7 |
0.51 |
0.71 |
0.92 |
0.49 |
0.7 |
0.88 |
chrX | 74872993 | 74879015 | chrX:74872993-74879015:-:L1PA3:REF | L1PA3 | REF | full-length | NEXMIF | 0.24 |
0.93 |
0.79 |
0.78 |
0.86 |
0.87 |
0.86 |
0.87 |
0.98 |
0.74 |
0.85 |
0.93 |
chrX | 75183022 | 75189043 | chrX:75183022-75189043:-:L1PA5:REF | L1PA5 | REF | full-length | UPRT | 0.06 |
0.6 |
0.68 |
0.67 |
0.04 |
0.64 |
0.62 |
— | 0.69 |
0.33 |
0.58 |
0.61 |
chrX | 75189044 | 75192098 | chrX:75189044-75192098:-:L1P1:REF | L1P1 | REF | 3prime-truncated | UPRT | 0.31 |
0.61 |
0.37 |
0.27 |
0.89 |
0.53 |
0.45 |
0.48 |
0.87 |
0.41 |
0.57 |
0.96 |
chrX | 75231937 | 75237961 | chrX:75231937-75237961:+:L1PA3:REF | L1PA3 | REF | full-length | UPRT | 0.13 |
0.46 |
— | 0.56 |
0.49 |
0.71 |
0.02 |
0.65 |
0.61 |
0.21 |
0.76 |
0.96 |
chrX | 75555159 | 75561178 | chrX:75555159-75561178:-:L1PA2:REF | L1PA2 | REF | full-length | — | 0.08 |
0.88 |
0.84 |
0.83 |
0.83 |
0.87 |
0.87 |
0.86 |
0.96 |
0.61 |
0.84 |
0.96 |
chrX | 75561270 | 75567303 | chrX:75561270-75567303:-:L1PA3:REF | L1PA3 | REF | full-length | — | 0.01 |
0.73 |
0.63 |
0.64 |
0.85 |
0.78 |
0.81 |
0.75 |
0.97 |
0.35 |
0.72 |
0.92 |
chrX | 75586528 | 75592512 | chrX:75586528-75592512:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.03 |
0.46 |
0.35 |
0.23 |
0.87 |
0.6 |
0.96 |
0.64 |
0.92 |
0.11 |
0.67 |
0.65 |
chrX | 75596508 | 75602623 | chrX:75596508-75602623:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.04 |
0.86 |
0.6 |
0.3 |
0.91 |
0.74 |
0.98 |
0.7 |
0.95 |
0.25 |
0.74 |
0.91 |
chrX | 76005216 | 76007849 | chrX:76005216-76007849:-:L1PA2:REF | L1PA2 | REF | 3prime-truncated | — | 0.2 |
0.7 |
0.77 |
0.79 |
0.14 |
0.89 |
0.92 |
0.81 |
0.94 |
0.63 |
0.88 |
0.95 |
chrX | 76046791 | 76052939 | chrX:76046791-76052939:-:L1PA4:REF | L1PA4 | REF | full-length | — | 0.1 |
0.74 |
0.64 |
0.67 |
0.88 |
0.76 |
0.72 |
0.77 |
0.92 |
0.43 |
0.78 |
0.97 |
chrX | 76068803 | 76074837 | chrX:76068803-76074837:+:L1PA3:REF | L1PA3 | REF | full-length | — | 0.05 |
0.86 |
0.67 |
0.6 |
0.87 |
0.69 |
0.81 |
0.78 |
0.89 |
0.62 |
0.76 |
0.9 |
chrX | 76093507 | 76096303 | chrX:76093507-76096303:-:L1PA7:REF | L1PA7 | REF | 3prime-truncated | — | — | 0.61 |
0.05 |
— | 0.83 |
0.22 |
— | 0.23 |
— | 0.03 |
0.19 |
1.0 |
chrX | 76159024 | 76165478 | chrX:76159024-76165478:+:L1PA7:REF | L1PA7 | REF | full-length | PBDC1 | 0.0 |
0.6 |
0.31 |
0.0 |
0.76 |
0.3 |
0.0 |
0.23 |
0.86 |
0.24 |
0.24 |
0.84 |
chrX | 76233354 | 76239154 | chrX:76233354-76239154:+:L1HS:REF | L1HS | REF | 3prime-truncated | — | 0.01 |
0.71 |
0.51 |
0.27 |
0.87 |
0.82 |
0.41 |
0.59 |
0.94 |
— | 0.65 |
0.96 |
chrX | 76260041 | 76261636 | chrX:76260041-76261636:-:L1PA6:REF | L1PA6 | REF | 3prime-truncated | — | 0.04 |
0.7 |
0.5 |
0.1 |
0.84 |
0.57 |
0.2 |
0.61 |
0.88 |
0.29 |
0.59 |
0.82 |
chrX | 76267405 | 76273429 | chrX:76267405-76273429:+:L1PA2:REF | L1PA2 | REF | full-length | — | 0.01 |
0.72 |
0.53 |
0.55 |
0.75 |
0.72 |
0.76 |
0.75 |
0.79 |
0.42 |
0.65 |
0.81 |
chrX | 76287997 | 76294015 | chrX:76287997-76294015:+:L1PA3:REF | L1PA3 | REF | full-length | — | — | — | 0.41 |
0.3 |
0.63 |
— | 0.45 |
— | — | 0.34 |
0.54 |
— |